Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002420-TA|BGIBMGA002420-PA|undefined
(80 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 30 0.17
AY383563-2|AAQ96594.1| 533|Caenorhabditis elegans excitatory GA... 30 0.17
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 30 0.17
Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 29 0.39
AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical ... 29 0.39
Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical pr... 28 0.68
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p... 28 0.68
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr... 28 0.68
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 27 1.2
Z68314-10|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical p... 27 1.2
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 27 1.2
AY383563-1|AAQ96595.1| 539|Caenorhabditis elegans excitatory GA... 27 1.2
AF098990-1|AAC67448.3| 539|Caenorhabditis elegans Expulsion def... 27 1.2
AF098987-4|AAC67429.1| 496|Caenorhabditis elegans Hypothetical ... 27 1.2
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 27 1.2
U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical p... 27 1.6
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 27 1.6
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 27 1.6
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 27 1.6
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 27 1.6
Z81544-7|CAB04432.2| 551|Caenorhabditis elegans Hypothetical pr... 27 2.1
U97194-2|AAN84846.1| 806|Caenorhabditis elegans Prion-like-(q/n... 27 2.1
U97194-1|AAK68236.1| 788|Caenorhabditis elegans Prion-like-(q/n... 27 2.1
AL034391-1|CAA22302.2| 333|Caenorhabditis elegans Hypothetical ... 27 2.1
AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative MAP-... 27 2.1
AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 27 2.1
Z99281-16|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 26 2.7
Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical pr... 26 2.7
Z77661-12|CAB01191.1| 381|Caenorhabditis elegans Hypothetical p... 26 3.6
Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical pr... 26 3.6
Z77658-12|CAB01162.1| 381|Caenorhabditis elegans Hypothetical p... 26 3.6
AY204171-1|AAO39175.1| 424|Caenorhabditis elegans nuclear recep... 26 3.6
AF273802-1|AAG15151.1| 353|Caenorhabditis elegans nuclear recep... 26 3.6
AF273801-1|AAG15150.1| 141|Caenorhabditis elegans nuclear recep... 26 3.6
AF022978-1|AAG24179.2| 424|Caenorhabditis elegans Nuclear hormo... 26 3.6
Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical pr... 25 4.8
Z32683-5|CAA83617.1| 191|Caenorhabditis elegans Hypothetical pr... 25 6.3
U80450-10|AAB37834.1| 417|Caenorhabditis elegans Temporarily as... 25 6.3
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 25 6.3
U64843-17|AAF98221.1| 185|Caenorhabditis elegans Hypothetical p... 25 6.3
U40956-4|AAA81759.1| 262|Caenorhabditis elegans Hypothetical pr... 25 6.3
U40956-1|AAA81756.1| 516|Caenorhabditis elegans Hypothetical pr... 25 6.3
L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with... 25 6.3
L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with... 25 6.3
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 25 6.3
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 25 6.3
AL033514-8|CAA22114.1| 648|Caenorhabditis elegans Hypothetical ... 25 6.3
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 25 6.3
Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z75547-1|CAA99908.2| 621|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z73427-4|CAA97802.2| 632|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical pr... 25 8.4
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr... 25 8.4
AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein. 25 8.4
AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of... 25 8.4
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 30.3 bits (65), Expect = 0.17
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 8 DEDIEDFLNIPSGSEDGQDFSDAESDDD 35
D+D ED+++ SED +DF + E D+D
Sbjct: 72 DDDDEDYVDETMPSEDEEDFDNNEEDED 99
>AY383563-2|AAQ96594.1| 533|Caenorhabditis elegans excitatory GABA
receptor EXP-1A protein.
Length = 533
Score = 30.3 bits (65), Expect = 0.17
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 27 FSDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVSRQRGCYEI 75
FS E+ D ++ ++ IQ+ ++P + + + E+SV+VS R E+
Sbjct: 88 FSSGETRDFLQFLRRIQYDHRQVPENEKGEATYVEVSVVVSNIRAVSEV 136
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 30.3 bits (65), Expect = 0.17
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 8 DEDIEDFLNIPSGSEDGQDFSDAESDDD 35
D+D ED+++ SED +DF + E D+D
Sbjct: 72 DDDDEDYVDETMPSEDEEDFDNNEEDED 99
>Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical
protein F25H5.5 protein.
Length = 725
Score = 29.1 bits (62), Expect = 0.39
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 1 MSRRRLRDEDIEDFLNIPSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSSLRA 60
++ + ED ED+ SG ED + ++ +DD++ F ++ N+V+ S +
Sbjct: 167 VNEEEYKSEDDEDYEPENSGEEDSDEKNNGRADDEMSVNLLNDSFTYDVFNNVKRSGPGS 226
Query: 61 EISVLVSR 68
+S SR
Sbjct: 227 TVSNFDSR 234
>AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical
protein Y73E7A.2 protein.
Length = 463
Score = 29.1 bits (62), Expect = 0.39
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 29 DAESDDDIERIQSIQFFLSEIPNDVETSSLRAEI 62
D E DDD+E I S + LS+ +D E + EI
Sbjct: 228 DEEDDDDVEEIPSDEEILSDFEDDEEEPAEELEI 261
>Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical
protein K07C5.3 protein.
Length = 493
Score = 28.3 bits (60), Expect = 0.68
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 2 SRRRLRDEDIEDFLNIPSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSS 57
S+R+ +D E + + + +G SD+ SD++ E S +SEI +D E S
Sbjct: 378 SKRQEESDDEESDVEMSNSESEGDQDSDSGSDNEEEISGSDSDDVSEISSDDEEES 433
>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 28.3 bits (60), Expect = 0.68
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 3 RRRLRDEDIEDFLNIPS---GS-EDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSSL 58
RRR R E+ +P GS EDG D D E D D + +I + + +V+ L
Sbjct: 1475 RRRQRLNSSENDAELPGSDEGSDEDGDDDEDGEGDPDFDMGAAIDDLVDAVDEEVDEDEL 1534
>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical protein
ZK1251.9 protein.
Length = 1701
Score = 28.3 bits (60), Expect = 0.68
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 3 RRRLRDEDIEDFLNIPS---GS-EDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSSL 58
RRR R E+ +P GS EDG D D E D D + +I + + +V+ L
Sbjct: 1475 RRRQRLNSSENDAELPGSDEGSDEDGDDDEDGEGDPDFDMGAAIDDLVDAVDEEVDEDEL 1534
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 27.5 bits (58), Expect = 1.2
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 7 RDEDIEDFLNIPSGSEDGQD---FSDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEIS 63
R ED E+ + G ++ +D D E DDD + ++ E P +E E++
Sbjct: 34 RMEDEEEEMEENEGDDEDEDEMVMDDEEEDDDEDEEEATNLDAPEAPEALEAQEDPEELN 93
Query: 64 VL 65
VL
Sbjct: 94 VL 95
>Z68314-10|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 27.5 bits (58), Expect = 1.2
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 2 SRRRLRDEDIEDFLNIP-SGSEDGQDFSDAESDDDIERIQSIQFFLSE 48
SRR R D E+ L +P +GSE + D E ++++ + ++ + SE
Sbjct: 1966 SRRAKRKLDFEEELKLPEAGSETIDESDDDEENEEVSKEENNELIDSE 2013
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 27.5 bits (58), Expect = 1.2
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 2 SRRRLRDEDIEDFLNIP-SGSEDGQDFSDAESDDDIERIQSIQFFLSE 48
SRR R D E+ L +P +GSE + D E ++++ + ++ + SE
Sbjct: 1966 SRRAKRKLDFEEELKLPEAGSETIDESDDDEENEEVSKEENNELIDSE 2013
>AY383563-1|AAQ96595.1| 539|Caenorhabditis elegans excitatory GABA
receptor EXP-1B protein.
Length = 539
Score = 27.5 bits (58), Expect = 1.2
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 21 SEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVSRQRGCYEI 75
S G D S E+ D ++ ++ IQ+ ++P + + + E+SV+VS R E+
Sbjct: 89 SSGGVD-SYGETRDFLQFLRRIQYDHRQVPENEKGEATYVEVSVVVSNIRAVSEV 142
>AF098990-1|AAC67448.3| 539|Caenorhabditis elegans Expulsion
defective (defecation)protein 1 protein.
Length = 539
Score = 27.5 bits (58), Expect = 1.2
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 21 SEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVSRQRGCYEI 75
S G D S E+ D ++ ++ IQ+ ++P + + + E+SV+VS R E+
Sbjct: 89 SSGGVD-SYGETRDFLQFLRRIQYDHRQVPENEKGEATYVEVSVVVSNIRAVSEV 142
>AF098987-4|AAC67429.1| 496|Caenorhabditis elegans Hypothetical
protein F40H3.1a protein.
Length = 496
Score = 27.5 bits (58), Expect = 1.2
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 11 IEDFLNIPSGS--EDGQDFSDAESDDDIERIQS-IQFFLSEIPNDVETSS 57
++DFL + + S E+ +DF ES + + + I+ L+EI N VET +
Sbjct: 54 LDDFLELQNDSDLEESEDFIQ-ESQEVVSSVDDEIKVILNEIINQVETET 102
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 27.5 bits (58), Expect = 1.2
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 2 SRRRLRDEDIEDFLNIP-SGSEDGQDFSDAESDDDIERIQSIQFFLSE 48
SRR R D E+ L +P +GSE + D E ++++ + ++ + SE
Sbjct: 1966 SRRAKRKLDFEEELKLPEAGSETIDESDDDEENEEVSKEENNELIDSE 2013
>U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical
protein ZK1127.4 protein.
Length = 349
Score = 27.1 bits (57), Expect = 1.6
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 9 EDIEDFLNIPSGSEDGQDFSDAESDDDIERIQSIQF 44
ED+E+ ++ ED +D D E D+D + I F
Sbjct: 39 EDVEEDEDV--SDEDDEDIDDEEEDEDEQNIMDFDF 72
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 27.1 bits (57), Expect = 1.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 21 SEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVE 54
SED D SD SD++ E S ++ + +P +VE
Sbjct: 616 SEDDSDDSDVSSDEESELKSSAKYKETPLPFEVE 649
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 27.1 bits (57), Expect = 1.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 21 SEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVE 54
SED D SD SD++ E S ++ + +P +VE
Sbjct: 616 SEDDSDDSDVSSDEESELKSSAKYKETPLPFEVE 649
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 27.1 bits (57), Expect = 1.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 21 SEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVE 54
SED D SD SD++ E S ++ + +P +VE
Sbjct: 616 SEDDSDDSDVSSDEESELKSSAKYKETPLPFEVE 649
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 27.1 bits (57), Expect = 1.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 20 GSEDGQDFSDAESDDDIER-IQSIQFFLSEIPN 51
G+E G+DF D +D ++ER ++SI+ + +P+
Sbjct: 126 GNEKGRDFIDLLTDCNVERELKSIEECMKSLPD 158
>Z81544-7|CAB04432.2| 551|Caenorhabditis elegans Hypothetical
protein F49C5.3 protein.
Length = 551
Score = 26.6 bits (56), Expect = 2.1
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 8 DEDIEDFLNIPSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEIS 63
++DIED ++ ++ + S S+D++E + ++ EI N+ +++EIS
Sbjct: 90 EDDIEDEIDDEESDDEEYEESGNGSEDEVE--EEVRVEEQEIENNFAYKKVKSEIS 143
>U97194-2|AAN84846.1| 806|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform b protein.
Length = 806
Score = 26.6 bits (56), Expect = 2.1
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 19 SGSEDGQDFSDAESDD--DIERIQSIQFFLSEIPNDV 53
SG EDG+ D E+DD +E + IQ + E P D+
Sbjct: 54 SGKEDGELDEDDENDDIEPMEIDEEIQLEIDEKPEDL 90
>U97194-1|AAK68236.1| 788|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform a protein.
Length = 788
Score = 26.6 bits (56), Expect = 2.1
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 19 SGSEDGQDFSDAESDD--DIERIQSIQFFLSEIPNDV 53
SG EDG+ D E+DD +E + IQ + E P D+
Sbjct: 54 SGKEDGELDEDDENDDIEPMEIDEEIQLEIDEKPEDL 90
>AL034391-1|CAA22302.2| 333|Caenorhabditis elegans Hypothetical
protein Y40H4A.2 protein.
Length = 333
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 29 DAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVSRQ 69
D +S++D ER+ ++ F+S + AE+ V VS++
Sbjct: 11 DEDSENDQERVAYLKAFISRLMTAPMKEKSPAEVDVTVSKE 51
>AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative
MAP-like protein protein.
Length = 788
Score = 26.6 bits (56), Expect = 2.1
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 19 SGSEDGQDFSDAESDD--DIERIQSIQFFLSEIPNDV 53
SG EDG+ D E+DD +E + IQ + E P D+
Sbjct: 54 SGKEDGELDEDDENDDIEPMEIDEEIQLEIDEKPEDL 90
>AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical
protein Y110A7A.8 protein.
Length = 504
Score = 26.6 bits (56), Expect = 2.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 8 DEDIEDFLNIPSGSEDGQDFSDAESDDDIE 37
D+D ED +IP E+ + E DDDIE
Sbjct: 13 DDDDEDLEDIPDLGENLKGVKKEELDDDIE 42
>Z99281-16|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 26.2 bits (55), Expect = 2.7
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 24 GQDFSDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVSRQR 70
GQD D + DDD + + SE V+TS+ E+ V ++
Sbjct: 482 GQDDIDEDEDDDSNKTEKPSEIPSEATKSVKTSTEATEMESEVETEK 528
>Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical
protein C34F6.9 protein.
Length = 1181
Score = 26.2 bits (55), Expect = 2.7
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 19 SGSEDGQDFSDAESDDDIER-IQSI 42
S SED DFS+ + D DIE+ +Q+I
Sbjct: 673 SMSEDNDDFSEHDEDFDIEQAVQAI 697
>Z77661-12|CAB01191.1| 381|Caenorhabditis elegans Hypothetical
protein F40G12.11 protein.
Length = 381
Score = 25.8 bits (54), Expect = 3.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 46 LSEIPNDVETSSLRAEISVLVSRQRG--CYEIL 76
LSE+ +E S LRA+ + V +Q G C E++
Sbjct: 165 LSELITQIEVSDLRAKANPAVGKQEGDRCKELV 197
>Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical
protein F38H4.3 protein.
Length = 471
Score = 25.8 bits (54), Expect = 3.6
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Query: 17 IPSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSS 57
+PSGSED SD E + D ++ I+F SE ETS+
Sbjct: 190 MPSGSED----SDVEVEGDNRKMSVIEFIRSEA--QAETSA 224
>Z77658-12|CAB01162.1| 381|Caenorhabditis elegans Hypothetical
protein F40G12.11 protein.
Length = 381
Score = 25.8 bits (54), Expect = 3.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 46 LSEIPNDVETSSLRAEISVLVSRQRG--CYEIL 76
LSE+ +E S LRA+ + V +Q G C E++
Sbjct: 165 LSELITQIEVSDLRAKANPAVGKQEGDRCKELV 197
>AY204171-1|AAO39175.1| 424|Caenorhabditis elegans nuclear receptor
NHR-55 protein.
Length = 424
Score = 25.8 bits (54), Expect = 3.6
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 27 FSDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVSRQRGCYEILKI 78
F+D++ DD E++ IQ + P DVE S + + + + +R E+L+I
Sbjct: 303 FADSDLDDRNEQV--IQAMMELQPTDVELSYMMCQACLHYAGKRYQGEVLEI 352
>AF273802-1|AAG15151.1| 353|Caenorhabditis elegans nuclear receptor
NHR-55 protein.
Length = 353
Score = 25.8 bits (54), Expect = 3.6
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 27 FSDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVSRQRGCYEILKI 78
F+D++ DD E++ IQ + P DVE S + + + + +R E+L+I
Sbjct: 232 FADSDLDDRNEQV--IQAMMELQPTDVELSYMMCQACLHYAGKRYQGEVLEI 281
>AF273801-1|AAG15150.1| 141|Caenorhabditis elegans nuclear
receptor NHR-55 protein.
Length = 141
Score = 25.8 bits (54), Expect = 3.6
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 27 FSDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVSRQRGCYEILKI 78
F+D++ DD E++ IQ + P DVE S + + + + +R E+L+I
Sbjct: 20 FADSDLDDRNEQV--IQAMMELQPTDVELSYMMCQACLHYAGKRYQGEVLEI 69
>AF022978-1|AAG24179.2| 424|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 55 protein.
Length = 424
Score = 25.8 bits (54), Expect = 3.6
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 27 FSDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVSRQRGCYEILKI 78
F+D++ DD E++ IQ + P DVE S + + + + +R E+L+I
Sbjct: 303 FADSDLDDRNEQV--IQAMMELQPTDVELSYMMCQACLHYAGKRYQGEVLEI 352
>Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical
protein C07A9.5 protein.
Length = 358
Score = 25.4 bits (53), Expect = 4.8
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 4 RRLRDEDIEDFLNIPSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSS 57
R + + + L+ S ED DA D + +FF+S+I ETSS
Sbjct: 290 RYMVKHETTNILDDHSAIEDALKNLDARKISDSMSRKEAEFFMSKIAKKAETSS 343
>Z32683-5|CAA83617.1| 191|Caenorhabditis elegans Hypothetical
protein R07E5.7 protein.
Length = 191
Score = 25.0 bits (52), Expect = 6.3
Identities = 12/45 (26%), Positives = 19/45 (42%)
Query: 8 DEDIEDFLNIPSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPND 52
DE ++ +D D S E DD++E + F I +D
Sbjct: 31 DEKKNGSQSVSENEDDNADKSAKEEDDEVEEEMKLPFVDQSIKDD 75
>U80450-10|AAB37834.1| 417|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform b protein.
Length = 417
Score = 25.0 bits (52), Expect = 6.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 19 SGSEDGQDFSDAESDDDIER 38
+ SE+ D SDAE DD+ R
Sbjct: 44 ASSEESSDLSDAEEKDDLIR 63
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform a protein.
Length = 1112
Score = 25.0 bits (52), Expect = 6.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 19 SGSEDGQDFSDAESDDDIER 38
+ SE+ D SDAE DD+ R
Sbjct: 739 ASSEESSDLSDAEEKDDLIR 758
>U64843-17|AAF98221.1| 185|Caenorhabditis elegans Hypothetical
protein K06C4.7 protein.
Length = 185
Score = 25.0 bits (52), Expect = 6.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 11 IEDFLNIPSGSEDGQDFSDAESDDDIERI 39
IE P G +D D +D + D+D+ I
Sbjct: 108 IEKNAGRPGGKDDDDDLNDEKDDEDLNLI 136
>U40956-4|AAA81759.1| 262|Caenorhabditis elegans Hypothetical
protein ZK402.1 protein.
Length = 262
Score = 25.0 bits (52), Expect = 6.3
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 8 DED-IEDFLNIPSGSEDGQ-DFSDAESDDDIERIQSIQFFLSEIPNDVETSSL 58
DED ++ ++P + + + S ++ DDD+E I+++ + P D + L
Sbjct: 31 DEDGVDSATSLPRSPKRARTEMSSSDDDDDLEIIETVDGYPKPEPVDFDFEEL 83
>U40956-1|AAA81756.1| 516|Caenorhabditis elegans Hypothetical
protein ZK402.5 protein.
Length = 516
Score = 25.0 bits (52), Expect = 6.3
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 8 DED-IEDFLNIPSGSEDGQ-DFSDAESDDDIERIQSIQFFLSEIPNDVETSSL 58
DED ++ ++P + + + S ++ DDD+E I+++ + P D + L
Sbjct: 227 DEDGVDSATSLPRSPKRARTEMSSSDDDDDLEIIETVDGYPKPEPVDFDFEEL 279
>L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
b protein.
Length = 926
Score = 25.0 bits (52), Expect = 6.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 8 DEDIEDFLNIPSGSEDGQDFSDAESDDDIERIQSI 42
D D E++ + S SED D E DD+ IQ I
Sbjct: 756 DGDQEEYNSKSSDSEDADLDDDDEDDDEEAEIQII 790
>L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
a protein.
Length = 960
Score = 25.0 bits (52), Expect = 6.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 8 DEDIEDFLNIPSGSEDGQDFSDAESDDDIERIQSI 42
D D E++ + S SED D E DD+ IQ I
Sbjct: 793 DGDQEEYNSKSSDSEDADLDDDDEDDDEEAEIQII 827
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 25.0 bits (52), Expect = 6.3
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 10 DIEDFLNIPSGSEDGQDFSD---AESDDDIERIQS 41
+ EDF ++ G DG D ++ AE+ DD E ++
Sbjct: 517 ETEDFEDVDDGLMDGDDMNERGAAEAFDDYEEFEN 551
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 25.0 bits (52), Expect = 6.3
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 4 RRLRDEDIEDFLNIPSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSS 57
R + + + L+ S ED DA D + +FF+S+I ETSS
Sbjct: 2039 RYMVKHETTNILDDHSAIEDALKNLDARKISDSMPRKEAEFFMSKIAKHAETSS 2092
>AL033514-8|CAA22114.1| 648|Caenorhabditis elegans Hypothetical
protein Y75B8A.7 protein.
Length = 648
Score = 25.0 bits (52), Expect = 6.3
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 20 GSEDGQDFSDAESDDDIE 37
GSEDG D SD S+++++
Sbjct: 107 GSEDGSDGSDGGSEEELD 124
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 25.0 bits (52), Expect = 6.3
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 27 FSDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVS 67
F+D SDD+ E Q+I +FL E PN++ RA V+++
Sbjct: 208 FTDL-SDDNGE--QNISYFLPEAPNEMLAIMDRAATEVVMN 245
>Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical
protein R11D1.1b protein.
Length = 622
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 8 DEDIEDFLNIPSGSEDGQDFSDAESDDD 35
+ED+E+ S SED D D E+DD+
Sbjct: 478 EEDVEE-----SSSEDSDDMMDNEADDN 500
>Z75547-1|CAA99908.2| 621|Caenorhabditis elegans Hypothetical
protein R11D1.1a protein.
Length = 621
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Query: 8 DEDIEDFLNIPSGSEDGQDFSDAESDDD 35
+ED+E+ S SED D D E+DD+
Sbjct: 477 EEDVEE-----SSSEDSDDMMDNEADDN 499
>Z73427-4|CAA97802.2| 632|Caenorhabditis elegans Hypothetical
protein F58B3.4 protein.
Length = 632
Score = 24.6 bits (51), Expect = 8.4
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 1 MSRRRLRDED--IEDFLNIPSGSEDGQDFSDAESDD 34
+S++ +DED ++DF + ED + +D E D+
Sbjct: 93 ISKKTTKDEDDELDDFFDEKDDDEDALEDADDEEDE 128
>Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical
protein C27B7.1b protein.
Length = 313
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 4 RRLRDEDIEDFLNIPSG-SEDGQDFSDAESDDDIE 37
+ + ++DIEDFLN G E+GQ D ++
Sbjct: 214 QEVEEDDIEDFLNEERGVDENGQRIPRRNISDSLK 248
>Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical
protein C27B7.1a protein.
Length = 312
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 4 RRLRDEDIEDFLNIPSG-SEDGQDFSDAESDDDIE 37
+ + ++DIEDFLN G E+GQ D ++
Sbjct: 213 QEVEEDDIEDFLNEERGVDENGQRIPRRNISDSLK 247
>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
protein K09H11.3 protein.
Length = 1085
Score = 24.6 bits (51), Expect = 8.4
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 12 EDFLNIPSGSEDGQDFSDAESDDDIERIQSI 42
+ FLN S E+ ++ +D E+DD ++ ++
Sbjct: 566 DSFLNNGSSMEEKENQADCETDDTLDATNNV 596
>AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 24.6 bits (51), Expect = 8.4
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 35 DIERIQSIQFFLS-EIPNDVETSSLRAEISVLVSRQRG---CYEILKIVS 80
D +I+ I FL + PND+E + E S+ V R + C E KI S
Sbjct: 1 DCAKIRKIIDFLEKDAPNDIEKTPNYNEXSLAVKRNKNFNPCLENPKICS 50
>AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of
presenilin 2 protein.
Length = 312
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 4 RRLRDEDIEDFLNIPSG-SEDGQDFSDAESDDDIE 37
+ + ++DIEDFLN G E+GQ D ++
Sbjct: 213 QEVEEDDIEDFLNEERGVDENGQRIPRRNISDSLK 247
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.135 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,939,176
Number of Sequences: 27539
Number of extensions: 71397
Number of successful extensions: 446
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 404
Number of HSP's gapped (non-prelim): 62
length of query: 80
length of database: 12,573,161
effective HSP length: 60
effective length of query: 20
effective length of database: 10,920,821
effective search space: 218416420
effective search space used: 218416420
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)
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