Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002419-TA|BGIBMGA002419-
PA|IPR001261|ArgE/dapE/ACY1/CPG2/yscS, IPR001680|WD-40 repeat,
IPR011046|WD40-like, IPR000007|Tubby, C-terminal
(1306 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 40 0.003
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 37 0.016
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 37 0.021
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 36 0.049
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 32 0.46
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 32 0.61
SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm type|Schizos... 32 0.61
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 31 0.80
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 31 0.80
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 31 0.80
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 31 1.1
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 31 1.1
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 31 1.1
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 31 1.4
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 31 1.4
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 30 1.9
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 30 1.9
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 30 2.4
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 30 2.4
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 30 2.4
SPAC19G12.01c |cut20|lid1, apc4, SPAPJ698.04c|anaphase-promoting... 29 3.2
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 29 3.2
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 29 4.3
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 29 4.3
SPAC8F11.06 |||nuclear envelope protein |Schizosaccharomyces pom... 29 4.3
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 29 4.3
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 29 5.6
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 29 5.6
SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 28 7.5
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 28 7.5
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 28 7.5
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 28 7.5
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp... 28 9.9
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 28 9.9
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 28 9.9
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 28 9.9
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 39.5 bits (88), Expect = 0.003
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 8/147 (5%)
Query: 61 TFTSSHSRRPHELPLRTNYNLRGHRSDVILVKW--NEPYQKLASCDSSGVIFVWIKYEGR 118
+F S + P ELP + + H +V + + N Y AS D + +IF + +
Sbjct: 189 SFLSDYKADPSELPTKEYHVFHDHSDEVWQISYSHNGRYLASASKDKTAIIFDVVNL--K 246
Query: 119 WSIELINDRSTPVTHFSWSHDGRMALICYQD-GFVLVGSVAGQRYWSSMLSLDARITSGC 177
LI T V + WS D R L C D +L + G++ ++ C
Sbjct: 247 RVFRLIGHIDT-VAYIRWSPDDRYLLSCSCDKSVILWDAFTGEKLRDYKHGFS--VSCCC 303
Query: 178 WTPDDNQVYLGTASAQLVVMDVHGAMV 204
W PD G+ + ++G ++
Sbjct: 304 WLPDGLSFITGSPDCHITHWSLNGEIL 330
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 37.1 bits (82), Expect = 0.016
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Query: 109 IFVWIKYEGRWSIELINDRSTPVTHFSWSHDGRMALICYQDGFVLVGSVAGQRYWSSMLS 168
++VW G S D ST V WSHDG + +G V + V Q +M
Sbjct: 202 VYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG 261
Query: 169 LDARITSGCWTPDDNQVYLGTASAQLVVMDV 199
AR+ GC + + + + G+ S + DV
Sbjct: 262 HQARV--GCLSWNRHVLSSGSRSGAIHHHDV 290
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 36.7 bits (81), Expect = 0.021
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 148 QDGFVLVGSVAGQRYWSSMLSLD---ARITSGCWTPDDNQVYLGTA-SAQLVVMDVHGAM 203
+DG ++V G +Y +M + A IT GCW PD +Q++L T + + DV+
Sbjct: 172 RDGSLIVRFSKGDQYIRNMYNTKGHIAEITDGCWQPDSSQIFLTTGYDSTARIWDVNRTK 231
Query: 204 VSQVQL---VAEGGITSMA 219
SQ+++ V EG T ++
Sbjct: 232 -SQLEVFVHVPEGSHTGLS 249
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 35.5 bits (78), Expect = 0.049
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Query: 48 WLATGNVRGVVGVTFTSSHSRRPHELPLRTNYNLRGHRSDVILVKWNEPYQ-KLASCDSS 106
WLAT + G V V R P ++ NY+ + +D+++ P Q +L SCD S
Sbjct: 97 WLATSSEDGTVKVW----DMRAPS---VQRNYDHKSPVNDLLI----HPNQGELLSCDQS 145
Query: 107 GVIFVWIKYEGRWSIELINDRSTPVTHFSWSHDGRMAL 144
G + W E + ELI + P++ + DG M +
Sbjct: 146 GRVRAWDLGENSCTHELIPEEDVPMSSITVGSDGSMLI 183
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 32.3 bits (70), Expect = 0.46
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 81 LRGHRSDVILVKWNE-PYQKLASCDSSGVIFVW 112
LRGH+ DV VKW KLA+C V+ +W
Sbjct: 311 LRGHKGDVNAVKWMPGSKSKLATCGDDCVVSLW 343
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 31.9 bits (69), Expect = 0.61
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 79 YNLRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHFSWSH 138
Y L GH S V + + Q +ASC I +W +G+ ++ I +T V S
Sbjct: 209 YELHGHTSFVYSLTYIHNQQLIASCGEDRTIRIW---KGKECLQCITLPTTSVWSVSSLP 265
Query: 139 DGRMALIC-YQDGFVLVGSV 157
+G L+C DGFV + +V
Sbjct: 266 NG--DLVCGSSDGFVRIFTV 283
>SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 31.9 bits (69), Expect = 0.61
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 558 PRQMTLTITELRDDYPVGPDPSFKPNIFSE-DEEEVFHSNDSNDSPSHTNNNIRRKLTLS 616
P++ +I E + P D K N F+E D++EV + SND P + + I + +
Sbjct: 12 PKESHNSIDE-QSQQPANTDTLVKDNSFNEQDDQEVDNDYKSNDEPVQSQDPISPNMASN 70
Query: 617 ERINNTN 623
E N+ N
Sbjct: 71 ESGNSEN 77
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 31.5 bits (68), Expect = 0.80
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 81 LRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHFSWS 137
L HR +V ++WN LAS + + VW K+E + + ++ V +WS
Sbjct: 370 LTAHRQEVCGLEWNSNENLLASGGNDNALMVWDKFEEK-PLYSFHNHIAAVKAITWS 425
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 31.5 bits (68), Expect = 0.80
Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 78 NYNLRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHFSWS 137
N + GH ++V++ +++ AS I +W + + ++N +T WS
Sbjct: 43 NLQMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQWS 102
Query: 138 HDGRMALICYQDGFVLV-GSVAGQR 161
D R+ D ++ +V+GQ+
Sbjct: 103 RDSRVVYCSSSDTHLMSWDAVSGQK 127
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 31.5 bits (68), Expect = 0.80
Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 175 SGCWTPDDNQVYLGTASAQLVVMDVHGAM--VSQVQLVAEGGITSMAWS 221
S CW+PD N +Y+G + + ++H V +++ + G S +S
Sbjct: 402 SACWSPDGNNIYIGRRNGIVEEYNIHSGKEPVRSLKMPLDSGPVSNVYS 450
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 81 LRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELIN 125
L+GH + V + ++ LAS D+ G +F+WIK + I+
Sbjct: 463 LQGHTNTVWALAFSPNGNTLASADNDGNVFLWIKISSNEDVATID 507
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 31.1 bits (67), Expect = 1.1
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Query: 81 LRGHRSDVILVKWNEPY--QKLASCDSSGVIFVWIKYEGRWSIELIND--RSTPVTHFSW 136
LRGH V + W P LAS G + VW + G WS EL++ V SW
Sbjct: 49 LRGHSGPVWQLGWAHPKFGTILASASYDGHVIVWRETGGVWS-ELMDHTAHQASVNAVSW 107
Query: 137 S-HDGRMALIC-YQDGFVLV 154
+ H+ L C DG V V
Sbjct: 108 APHEYGALLACASSDGKVSV 127
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 586 SEDEEEVFHSNDSNDSPSHTNNNIRRKLTLSERINNTNNLINQSEIYNPNNNTSVPSLAR 645
S ++ F + D + T + R+K+ IN + I+ + Y PN +
Sbjct: 219 SAHNDDGFWDDFDIDFNNETESIFRKKIRSPNTINQKHPYISSTISYQPNVHQDAKYYPL 278
Query: 646 AESYDEFPYIDTTDAVNNVPESVY---TAAVRGSERRINSSAAVSGRHAISPLRCESSVP 702
+ D FP + + ++ P Y T + R + + S +H+ SP++ SS+
Sbjct: 279 CK--DIFPSLANENPHSDNPNLKYSSKTLSKRDTSSHYPETLKASSKHS-SPVKGNSSIS 335
Query: 703 TLQSPKN 709
+ +P N
Sbjct: 336 STWTPSN 342
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 1167 KKQSESSDDEYPNGYNEVNSKNYRDLESFQKAQLRNKLKRGGNPA--SGNNTGESRNNNA 1224
K SE+ ++Y + + VN + + +S +K+ NK RG N + S N++ E ++
Sbjct: 68 KITSEADTEKYNSSKSPVNKEGSVEKKSSEKSSTNNKPWRGDNTSKPSANSSAERTSSQH 127
Query: 1225 RR-----QLIMHNKAPMWNENSQ 1242
++ Q+ N AP+ N N +
Sbjct: 128 QKPETSSQIGKDNAAPVENVNEK 150
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 81 LRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHFSWSHDG 140
+ GH+ V ++ + +A+ + +W G++ + + V +WS D
Sbjct: 385 MHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKF-LATLRGHVAAVYQCAWSTDS 443
Query: 141 RMALICYQDGFVLVGSVAGQRYWSSMLSLDARITSGCWTPDDNQVYLGTA 190
R+ + QD + V V ++ + + ++ + W+PD +V G A
Sbjct: 444 RLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGA 493
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/124 (18%), Positives = 45/124 (36%)
Query: 98 QKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHFSWSHDGRMALICYQDGFVLVGSV 157
++L S + +W + I ++ V H S+S DGR D V +
Sbjct: 359 ERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDG 418
Query: 158 AGQRYWSSMLSLDARITSGCWTPDDNQVYLGTASAQLVVMDVHGAMVSQVQLVAEGGITS 217
++ +++ A + W+ D + + L V DV + E + +
Sbjct: 419 KTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFA 478
Query: 218 MAWS 221
+ WS
Sbjct: 479 VDWS 482
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 76 RTNYNLRGHRSDVILVKWNEPYQKLASCDSSGVIFVW 112
+ ++L GH V V W+ Q++AS + + +W
Sbjct: 464 KMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 30.3 bits (65), Expect = 1.9
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 594 HSNDSNDSPSHTNNNIRRKLTLSERINNTNNLINQSEIYNPNNNTSVPSLARAESYDEFP 653
HS S S+TN +K E ++ NN I+ N + NT VPSL R ++ D
Sbjct: 317 HSPKDYISQSYTNEPGLKK----ESADSFNNSIDSYISPNQSPNTDVPSLNRDDTTDP-K 371
Query: 654 YIDTTDAVNNVPESVYTAAVRGSERRINSSAAVSGRHAISPLRCESSVPTLQSPKNAVA 712
++T D +N + ++ ++ GS S +++ P+ SS S + +V+
Sbjct: 372 VVNTGDIINMLDDA---NSIEGSNMNSLSPLLFDYPNSLYPVNNTSSEQHHNSYRGSVS 427
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 4/129 (3%)
Query: 71 HELPLRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTP 130
H PLR GH SDV V ++ + + S +W + G S+ + N + P
Sbjct: 452 HIYPLRV---FAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGH-SVRVFNGHTQP 507
Query: 131 VTHFSWSHDGRMALICYQDGFVLVGSVAGQRYWSSMLSLDARITSGCWTPDDNQVYLGTA 190
VT + + DG +G + + + R +M I S ++ + + G +
Sbjct: 508 VTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGS 567
Query: 191 SAQLVVMDV 199
+ DV
Sbjct: 568 DCTVRAWDV 576
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 29.9 bits (64), Expect = 2.4
Identities = 35/169 (20%), Positives = 65/169 (38%), Gaps = 9/169 (5%)
Query: 58 VGVTFTSSHSRRPHELPLRTNYNLRGHRSDVILVKWNE-PYQKLASCDSSGVIFVWIKYE 116
VG+ + + +P + + +GH + +++ L S I +W Y
Sbjct: 239 VGINLSEEPGEQTCYIPKKHIFTWKGHTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYH 298
Query: 117 GRWSIELINDRSTPVTHFSWSHDGRMALICYQDGFVLVGSVAGQRYWSSMLSLDARITSG 176
R + + P+ S+S DGR L D + + + + S R+T+
Sbjct: 299 DRSLLRTFQGHARPIRDLSFSQDGRSFLSTSFDKTIKLWDTELGKCLNCFNS--DRLTN- 355
Query: 177 C----WTPD-DNQVYLGTASAQLVVMDVHGAMVSQVQLVAEGGITSMAW 220
C PD N+ GTA +++ D+ + Q GGI S+ +
Sbjct: 356 CVKFQVDPDKPNEFLAGTADKRILQFDIRSPDIVQAYDHHLGGINSITF 404
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 81 LRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEG 117
L+GH + +K+N L SC VI VW + G
Sbjct: 6 LQGHERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNG 42
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 80 NLRGHRSDVILVKWNEPYQKLASCDSSGVIFVW--IKYEGRWSIELINDRSTPVTHFSW- 136
+L+G + + + WN +LAS SSG + VW + + +++ EL N V W
Sbjct: 19 DLQGQQGPIRSLGWNLSGSRLASSSSSGSVLVWNSDRLDFKFTTELGNRGYGLVEQLVWD 78
Query: 137 -SHDGRMALI 145
+H R+ +
Sbjct: 79 PTHSDRLMAV 88
>SPAC19G12.01c |cut20|lid1, apc4, SPAPJ698.04c|anaphase-promoting
complex subunit Apc4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 719
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 160 QRYWSSMLSLDARITSGCWTPDDNQVYLGTASAQLVVMDVH-GAMVSQVQLVAEGGITSM 218
QR W D T CW D N + +G + +L ++D G +V Q + + +
Sbjct: 59 QRIWDVDFH-DLEATELCWNHDGNLIVVGFKNGELKIIDSSTGHLVEQRPASRDLAVLMI 117
Query: 219 AWSCEK 224
W+ ++
Sbjct: 118 TWAMQE 123
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 29.5 bits (63), Expect = 3.2
Identities = 26/124 (20%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 91 VKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHFSWSHDGRMALICYQDG 150
V +N PY+ + + ++++ + +N + +T +W+ DG + L+ DG
Sbjct: 382 VSFNLPYRMVFAVACQDAVYIYDTQTCKPFYRAVNLHYSNLTDIAWNDDGNVLLMTSIDG 441
Query: 151 FV-LVGSVAGQRYWSSM--LSLDARITSGCWTPDDNQ--VYLGTASAQLVVMDVHGAMVS 205
F ++ G+ S +SL + ++ + DD+Q G A+ L+ V + VS
Sbjct: 442 FCSVITFEPGELGVKSQHKISLPEKRSASPSSIDDSQDNTAGGPATTTLIPRKVESSKVS 501
Query: 206 QVQL 209
+ ++
Sbjct: 502 KKRI 505
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 61 TFTSSHSRRPHELPLRTNYNLR---GHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEG 117
T +S H+ R ++ RT +R H S V + + LAS D SG+I VW
Sbjct: 504 TGSSDHTTRMWDV--RTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSS 561
Query: 118 RWSIELINDRSTPVTHFSWSHDGRM 142
+ + S+ V S+S+D ++
Sbjct: 562 NQHVSFVK-HSSIVYSLSFSYDNKI 585
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/66 (21%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 592 VFHSNDSNDSPSHTNNNIRRKLTLSERINNTNNLINQSEIYNPNNNTSV-PSLARAESYD 650
+F + DS+++ NN + + ER N + ++ +P+ ++S+ P+ ++ +S+
Sbjct: 263 LFPNQDSSNTIDLINNRSKTSVENQERTFNLTSDVHLDSPTSPSKHSSIEPNTSQEDSFQ 322
Query: 651 EFPYID 656
E P ++
Sbjct: 323 ELPSLN 328
>SPAC8F11.06 |||nuclear envelope protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/80 (21%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 586 SEDEEEVFHSNDSNDSPSHTNNNIRRKLTLSERINNTNNLINQSEIYNPNNNTSVPSLAR 645
+E++ E + S D + + +RRKL S+ +++N + +++ +N+S ++ +
Sbjct: 38 NENDPEPMDISMSPDEKNLKKSTVRRKLRKSKPNSSSNQVSSRTRALTKRSNSS-NAIIK 96
Query: 646 AESYDEFPYIDTTDAVNNVP 665
A + D D T+ ++P
Sbjct: 97 ANNQDSVYVSDWTNVHRDIP 116
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 570 DDYPVGPDPSFKPNIFSEDEEEVFHSNDSNDSPSHTNNNIRRKLTLSERINNTNNLINQS 629
++Y + K N S+D ++ +ND+ +H N + S+ N N +
Sbjct: 215 EEYQKQWEDFLKSNNISDDPYTSSVNSFANDNLAHNKNIDPQIFQHSDTDNVVENSLQTE 274
Query: 630 EIYNPNNNTSVPSLARAESYDEFPYIDTTDAVNNVPESVYTAAV 673
++Y+ N + S + D P+++ + + N S+ AAV
Sbjct: 275 DVYSQNQDESSEVVKELNGID--PFVEAMNLIKN-GGSISKAAV 315
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 28.7 bits (61), Expect = 5.6
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Query: 504 PDELAYIDSLPEDV---RLVEVTSNIWGTKFKMHGLAKNVPANLGQVTYKTSLLHLQPRQ 560
P EL + L E + ++ V GT F++ L + N Q YK ++
Sbjct: 220 PPELGLLTELREVLLFDNMISVIPAELGTLFQLKILG--IEGNPLQDVYKNQIMESGTAG 277
Query: 561 MTLTITELRDDYPVGPDPSFK--PNIFSEDEEEVFHSNDSNDSPSHTNNNIRRKLTLSER 618
+ I LRD PVGP P + + S+D+++V + N S T + + T S+
Sbjct: 278 L---IAALRDGCPVGPPPPERGWEKLVSDDDDDV-NDNVSTSVRDLTAADSNKPSTTSKN 333
Query: 619 INNT 622
+ T
Sbjct: 334 LKFT 337
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 73 LPLRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVT 132
L R L GH + VKW + LAS I +W +E R S+ + + V+
Sbjct: 84 LTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIW-DFEKRCSVRCLKGHTNYVS 142
Query: 133 HFSWSHDGRM 142
++ G +
Sbjct: 143 SIDFNPLGTL 152
>SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1010
Score = 28.3 bits (60), Expect = 7.5
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 14/134 (10%)
Query: 509 YIDSLPEDVRLVEVTSNIWGTKFKMHGLAKNVPANLGQVTY-----KTSLLHLQPR---Q 560
Y L +DV ++N T ++ L +N+PA Q +Y + ++ P Q
Sbjct: 525 YYRFLAQDVVSDHKSTNSSATFSRLEELGENIPAISKQPSYLSISSSSKSINSSPSPSIQ 584
Query: 561 MTLTITELRDDYPVGPDPSFKPNIFSEDEEEVFHSNDS---NDSPSHTNNNIRRKLTLSE 617
++++ + RD D +S++EE +F ++S NNNI L
Sbjct: 585 LSVSSSISRDKNLSPLDLELDDPTYSDEEEVLFAPPGDLQLSESIDELNNNIEE---LKA 641
Query: 618 RINNTNNLINQSEI 631
++N N LI ++E+
Sbjct: 642 QLNAINTLIKKAEL 655
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Query: 81 LRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHFSWSHDG 140
LRGHR V +N ++LAS I +W + + ++ + + + + G
Sbjct: 503 LRGHRRGVWACSFNPFSRQLASGSGDRTIRIW-NVDTQQCVQTLEGHTGAILKLIYISQG 561
Query: 141 RMALICYQDGFVLVGSVAGQRYWSSMLSLDARITSGCWTPDDNQVYLGTASAQLVV 196
+ DG V V S++ +++ + + R+ + D + + G A A + V
Sbjct: 562 TQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSV 617
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 575 GP-DPSFKPNIFSEDEEEVFHSNDSNDS 601
GP DP+ +P++F E E+V ++D ND+
Sbjct: 34 GPIDPARRPDVFQEGFEDVSVTDDDNDN 61
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 28.3 bits (60), Expect = 7.5
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 1167 KKQSESSDDEYPNGYNEVNSKNYRDLESFQKAQLRNKLKRGGNPASGN-NTGESRNNNAR 1225
K S++S PN + S+N + A N + GN GN N +SR+
Sbjct: 406 KISSKASPFNKPNSVHSEASRNTPSSIDRENASHSNPIMMHGNDFGGNFNNMQSRSTTTS 465
Query: 1226 RQLIMHNKAPMWNENS 1241
+ + AP NE+S
Sbjct: 466 PTSAVASPAPTENEDS 481
>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 27.9 bits (59), Expect = 9.9
Identities = 27/134 (20%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 599 NDSPSHTNNNIRRKLTLSERINNTNNL--INQSEIYN-PNNNTSVPSLARAESYDEFPYI 655
N SP +N+N ++ + S+ +NN + ++ ++++ P+ ++ S DE
Sbjct: 41 NPSPPRSNDNSNKEFSYSKDVNNNGAVEELSLTQLFEVPSQAAFAKQSSQDISDDELIQH 100
Query: 656 DTTDAVNN--VPESVYTAAVRGSERRINSSAAVSGRHAISPLRCESSVPTLQSPKNAVAP 713
D+ +++ P+ +T R +R+ S ++P +S L SP ++ P
Sbjct: 101 DSRKVISSPYSPKQTHTVLKRLYDRQ---SVISDHEKLLTPQNVSNSSQIL-SPFTSLLP 156
Query: 714 TDIIFERPSPQTVS 727
+ + + +P +VS
Sbjct: 157 STLSTLKDTPLSVS 170
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 699 SSVPTLQSPKNAVAPTDIIFERPSPQTVSCGGRGDFCGGRTEYTVRTDSTGLKGNLSAIE 758
S + + ++V PT II +P TVS F + T ST G+ + +
Sbjct: 232 SVISSASLSSSSVLPTSIITSTSTPVTVSSSSLSSFTPSYSTNLTTTGSTTTTGS-ATVS 290
Query: 759 QQPYGLNLGLEPS 771
P+ N + P+
Sbjct: 291 SSPFYSNSSVIPT 303
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 1170 SESSDDEYPNGYNEVNSKNYRDLESFQKAQLRNKLKRGGNPASGNNTGESRNNNARRQLI 1229
+ ++++ YN NS N + L+ N +SGN+ ++ NNN Q
Sbjct: 563 NNNNNNSNSGNYNNNNSGNNNQQHQQSSSSLQGLASSFLNSSSGNSNKQNYNNN-NNQNY 621
Query: 1230 MHNKAPMWNENSQVYQ 1245
+N +N N+ Q
Sbjct: 622 GNNNNQNYNNNNNSSQ 637
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 27.9 bits (59), Expect = 9.9
Identities = 42/181 (23%), Positives = 70/181 (38%), Gaps = 18/181 (9%)
Query: 58 VGVTFTSSHSRRPHELPLRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGVIFVW--IKY 115
+G TF S H R+ L GH +D+ + W+ Q + S I VW +
Sbjct: 110 LGSTFGSGEK---HTENWRSYRRLLGHDNDIQDLCWSYDSQLVVSVGLDSSIIVWNGTTF 166
Query: 116 EGRWSIELINDRSTPVT------HFSWSHDGRMALICYQDGFVLVGSVAGQRYWSSMLSL 169
E IE +T +F+ D R + F + ++ G + +S LS
Sbjct: 167 ERLKRIEAHQSHVKGITFDPAGKYFATESDDRTIKVWRVSDFSIEKTITGP-FNNSPLST 225
Query: 170 DARITSGCWTPDDNQVYLGTA---SAQLVVMDVHGAMVSQVQLVA-EGGITSMAWSCEKF 225
R S W+PD + A V + G S++ L+ EG + A++ + F
Sbjct: 226 YFRRPS--WSPDGKHIAAPNAMNGPVSCVSIIERGTWTSEINLIGHEGPVEVTAFNPKLF 283
Query: 226 K 226
+
Sbjct: 284 R 284
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.132 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,416,578
Number of Sequences: 5004
Number of extensions: 221963
Number of successful extensions: 679
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 629
Number of HSP's gapped (non-prelim): 74
length of query: 1306
length of database: 2,362,478
effective HSP length: 81
effective length of query: 1225
effective length of database: 1,957,154
effective search space: 2397513650
effective search space used: 2397513650
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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