Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002419-TA|BGIBMGA002419-
PA|IPR001261|ArgE/dapE/ACY1/CPG2/yscS, IPR001680|WD-40 repeat,
IPR011046|WD40-like, IPR000007|Tubby, C-terminal
(1306 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 254 2e-67
Z48334-4|CAB61010.2| 426|Caenorhabditis elegans Hypothetical pr... 87 1e-16
AF143297-1|AAD33902.1| 426|Caenorhabditis elegans tubby homolog... 87 1e-16
U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical pr... 85 2e-16
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 44 5e-04
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 39 0.027
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 36 0.14
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 36 0.19
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 36 0.19
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 36 0.19
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 35 0.33
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 33 1.0
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 33 1.0
AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical ... 33 1.0
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 33 1.3
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 33 1.3
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 32 2.3
Z81589-9|CAJ85769.1| 926|Caenorhabditis elegans Hypothetical pr... 32 3.1
Z81589-8|CAB04720.1| 923|Caenorhabditis elegans Hypothetical pr... 32 3.1
Z46828-2|CAA86857.1| 434|Caenorhabditis elegans Hypothetical pr... 32 3.1
Z32679-3|CAA83596.1| 401|Caenorhabditis elegans Hypothetical pr... 32 3.1
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 32 3.1
Z79756-3|CAB02121.1| 527|Caenorhabditis elegans Hypothetical pr... 31 4.1
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 31 5.4
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 31 7.2
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 30 9.5
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n... 30 9.5
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 254 bits (623), Expect = 2e-67
Identities = 169/561 (30%), Positives = 258/561 (45%), Gaps = 33/561 (5%)
Query: 22 WMGKVPDELPEEEGWKLNRNNYYQEGWLATGNVRGVVGVTFTSSHSRRPHELPLRTNYNL 81
W G ++ W + + + G L G G VGVT T P +L R N+NL
Sbjct: 9 WQGARIEQTITHLSW-IQQQDKPDHGLLGVGTETGSVGVTLTD-FKPTPDDLT-RYNFNL 65
Query: 82 RGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHFSWSHDGR 141
RGH + + +V WN+ KLASCD+SG+I+VW++ + RWS+EL+NDR V+ SWS G
Sbjct: 66 RGHHNAIRMVTWNKSQSKLASCDASGIIYVWVRNDDRWSVELVNDRGVKVSDLSWSPCGG 125
Query: 142 MALICYQDGFVLVGSVAGQRYWSSMLSLDARITSGCWTPDDNQVYLGTASAQLVVMDVHG 201
ALICY D FVL+GS GQR WS+ L A +T G W PD Q+ LG ++ + V+ G
Sbjct: 126 SALICYDDNFVLIGSANGQRVWSNSFPLPAAVTCGVWAPDSRQLVLGFSTGTIQVLSNAG 185
Query: 202 AMVSQVQLVAEGGITSMAWSCEKFKMXXXXXXXXXXXXHVLAVALGSGEIVLLRGHDDVS 261
++ + E +T MA+S + K+ LA+ + +I ++ +D +
Sbjct: 186 VNITS-RSFTEDKLTQMAFSPLRTKV--------REVEWTLAMLSSANKIYMISAYDQLH 236
Query: 262 PVRVQTGIRGNTLAMEWANSKELLAVAGTLGADI-DDSADSPPYKNIVKFYSDTGVLIYT 320
P ++ + + MEW +LA+ + D+ ++ + LI
Sbjct: 237 PAIYRS--KFQVIRMEWNTDGTILALINANNELVMIDTTCRVIHRERIPIADKEKTLI-- 292
Query: 321 VPIPFTQARVTALTWGHAARRLFVGVGGGVCTARV-WXXXXXXXXXXXXXXXXXXXXXXX 379
P P ++TA TW H + + GG + R+ +
Sbjct: 293 -PNPPPTQKLTAFTWAHNGNVVIIAAGGCLTVGRILFGVPSLFEIVTYDLWKMMGCSSKK 351
Query: 380 XXXXXXXXXXXXXXXNLFSHTIRCNVPEMSDLRRFVSRPPATGARLHCTMLRHDDEEPGA 439
L H IRC +P D+ +V AR +CT +R
Sbjct: 352 VDKLPIPLKEMNALRELDHHVIRCRIPRSQDMCSYVC--SVVDARCYCT-IRPLARGSHT 408
Query: 440 YTLYLEHLGGLVPLLKGRRTSKIRPEFVIFDPQAEGCSGSPXXXXXX----------XXX 489
Y L EHLGGLVPLL GR+ ++ P+F IF Q++ + SP
Sbjct: 409 YVLCFEHLGGLVPLLLGRQVNRFLPQFQIFMYQSKPPTSSPPSGSSAQVEDVNSIFRYST 468
Query: 490 XXXXXXXXTEKDEPPDELAYIDSLPEDVRLVEVTSNIWGTKFKMHGLAKN-VPANLGQVT 548
+++ ++ D RL++VTSN+W T+F + L+ + +P LGQV
Sbjct: 469 GRNSLWRRSKRQIRALMSRHVRPTRPDTRLLQVTSNVWCTRFNISSLSPSLLPTFLGQVI 528
Query: 549 YKTSLLHLQPRQMTLTITELR 569
YKTS+LHLQPRQMT+ + L+
Sbjct: 529 YKTSVLHLQPRQMTIDLAVLQ 549
Score = 136 bits (329), Expect = 1e-31
Identities = 64/91 (70%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
Query: 1216 TGESRNNNARRQLIMHNKAPMWNENSQVYQLDFGGRVTQESAKNFQIEYHGKQVMQFGRI 1275
+G S N+ + + M NK P WNE +QVYQLDFGGRVTQESAKNFQIE KQV+QFGRI
Sbjct: 780 SGRSLNSTCKIET-MTNKTPFWNEQNQVYQLDFGGRVTQESAKNFQIELDSKQVLQFGRI 838
Query: 1276 DGNAYTLDFQYPFSALQAFAVALANVTQRLK 1306
+G +YTLDF+YPFSA QAFAVALA++TQRLK
Sbjct: 839 EGGSYTLDFRYPFSAAQAFAVALASITQRLK 869
>Z48334-4|CAB61010.2| 426|Caenorhabditis elegans Hypothetical protein
F10B5.4 protein.
Length = 426
Score = 86.6 bits (205), Expect = 1e-16
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 1220 RNNNARRQLIMHNKAPMWNENSQVYQLDFGGRVTQESAKNFQIEYHGKQ---VMQFGRID 1276
R N+ I+ NK+P WN+ +Q Y L+F GRVTQ S KNFQI + VMQFGRI
Sbjct: 335 RLNDLDSLKILSNKSPQWNDETQSYVLNFHGRVTQASVKNFQIIHQSSPEYIVMQFGRIS 394
Query: 1277 GNAYTLDFQYPFSALQAFAVALANVTQRL 1305
+ +T+DF+YP SA+QAF +A+ + +L
Sbjct: 395 DDEFTMDFRYPLSAVQAFGIAMTSFHGKL 423
>AF143297-1|AAD33902.1| 426|Caenorhabditis elegans tubby homolog
protein.
Length = 426
Score = 86.6 bits (205), Expect = 1e-16
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 1220 RNNNARRQLIMHNKAPMWNENSQVYQLDFGGRVTQESAKNFQIEYHGKQ---VMQFGRID 1276
R N+ I+ NK+P WN+ +Q Y L+F GRVTQ S KNFQI + VMQFGRI
Sbjct: 335 RLNDLDSLKILSNKSPQWNDETQSYVLNFHGRVTQASVKNFQIIHQSSPEYIVMQFGRIS 394
Query: 1277 GNAYTLDFQYPFSALQAFAVALANVTQRL 1305
+ +T+DF+YP SA+QAF +A+ + +L
Sbjct: 395 DDEFTMDFRYPLSAVQAFGIAMTSFHGKL 423
>U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical
protein C54G7.4 protein.
Length = 1199
Score = 85.4 bits (202), Expect = 2e-16
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 36 WKLNRNNYYQEGWLATGNVRGVVGVTFTSSHSRRPHELPLRTNYNLRGHRSDVILVKWNE 95
W N +NY G A G ++ V T + ++ P+ L N L GH + V+ WNE
Sbjct: 22 WNYN-SNYIACGG-ALGKLKVVKIGTDATDLNKSPNAATLVVNQALEGHNATVMNATWNE 79
Query: 96 PYQKLASCDSSGVIFVWIKYEGRWSIELINDRS-TPVTHFSWSHDGRMALICYQDGFVLV 154
QKL + D+SG+I VW + +W E+IN+R+ + V W+ +G I Y DG V+V
Sbjct: 80 NNQKLTTSDTSGLIIVWGMFNEQWCEEMINNRNKSVVVSICWNLEGTKIAIAYADGNVIV 139
Query: 155 GSVAGQRYWSSMLSL 169
G++ G R W+ L +
Sbjct: 140 GTLEGNRIWNKELEI 154
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 44.4 bits (100), Expect = 5e-04
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Query: 81 LRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHFSWSHDG 140
+RGH + V +N +AS + VW ++ ++ I S P+T S++HDG
Sbjct: 293 MRGHTNYVFCCSFNPQSSLIASAGFDETVRVW-DFKTGLCVKCIPAHSDPITSISYNHDG 351
Query: 141 RMALICYQDGFVLVGSVAGQRYWSSMLSLD-ARITSGCWTPDDNQVYLGTASAQLVVMD 198
DG + V A +++ D A +T C++P+ + + L + D
Sbjct: 352 NTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWD 410
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 38.7 bits (86), Expect = 0.027
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 77 TNYNLRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHFSW 136
T +++ GH V V +N LAS G++ +W G LI++ P+TH +
Sbjct: 224 TIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKF 283
Query: 137 SHDGRMAL 144
S +G+ L
Sbjct: 284 SPNGKYIL 291
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 36.3 bits (80), Expect = 0.14
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 93 WNEPYQKLASCDSSGVIFVWIKYEGRW-SIELINDRSTPVTHFSWSHDGRMALICYQDGF 151
WN+ ++A SS I ++ G W SI +++ PVT W + C QD
Sbjct: 22 WNKDRTQIAVSASSNDIHIFEWRNGDWQSIHTLSEHDLPVTGLDWGTKTNRIVSCSQDKN 81
Query: 152 VLVGSVAGQRYWSSMLSL---DARITSGCWTPDDNQVYLGTASAQLV 195
V + + W L L + T W+P +N+ +G + A+LV
Sbjct: 82 AFVWTF-DKNVWKPELVLVRFNRAATYVKWSPLENKFAVG-SGAKLV 126
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 35.9 bits (79), Expect = 0.19
Identities = 30/130 (23%), Positives = 48/130 (36%), Gaps = 4/130 (3%)
Query: 73 LPLRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVT 132
+ +RT LRGH + + + W + L S G + VW Y + I RS+ V
Sbjct: 43 IQMRTRRTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTN-KVHAIPLRSSWVM 101
Query: 133 HFSWSHDGRMALICYQDGFVLVGSV---AGQRYWSSMLSLDARITSGCWTPDDNQVYLGT 189
+++ G D + S+ G S L S C DDNQ+ +
Sbjct: 102 TCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSS 161
Query: 190 ASAQLVVMDV 199
+ D+
Sbjct: 162 GDMTCALWDI 171
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 35.9 bits (79), Expect = 0.19
Identities = 30/130 (23%), Positives = 48/130 (36%), Gaps = 4/130 (3%)
Query: 73 LPLRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVT 132
+ +RT LRGH + + + W + L S G + VW Y + I RS+ V
Sbjct: 43 IQMRTRRTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTN-KVHAIPLRSSWVM 101
Query: 133 HFSWSHDGRMALICYQDGFVLVGSV---AGQRYWSSMLSLDARITSGCWTPDDNQVYLGT 189
+++ G D + S+ G S L S C DDNQ+ +
Sbjct: 102 TCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSS 161
Query: 190 ASAQLVVMDV 199
+ D+
Sbjct: 162 GDMTCALWDI 171
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 35.9 bits (79), Expect = 0.19
Identities = 30/130 (23%), Positives = 48/130 (36%), Gaps = 4/130 (3%)
Query: 73 LPLRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVT 132
+ +RT LRGH + + + W + L S G + VW Y + I RS+ V
Sbjct: 43 IQMRTRRTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTN-KVHAIPLRSSWVM 101
Query: 133 HFSWSHDGRMALICYQDGFVLVGSV---AGQRYWSSMLSLDARITSGCWTPDDNQVYLGT 189
+++ G D + S+ G S L S C DDNQ+ +
Sbjct: 102 TCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSS 161
Query: 190 ASAQLVVMDV 199
+ D+
Sbjct: 162 GDMTCALWDI 171
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 35.1 bits (77), Expect = 0.33
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 18/116 (15%)
Query: 81 LRGHRSDVILVKWNEPYQK------LASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHF 134
L+ H+ + + W +P K LASC G IF+W +G + ++ + VT
Sbjct: 186 LKRHKQWITSLAW-QPMHKDPTCRLLASCGKDGNIFIWDTVQGT-VVRCLSGHTASVTCL 243
Query: 135 SWSHDG--------RMALICYQDGFVLVGSVAGQRYWSSMLSL--DARITSGCWTP 180
W +G R + D V+ ++ G +W + L+L D + + C+ P
Sbjct: 244 RWGGEGLIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYALRTSCFEP 299
Score = 34.7 bits (76), Expect = 0.44
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 72 ELPLRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPV 131
ELPL T + H+S V+ + W+ K+AS +G I +W G + + +
Sbjct: 137 ELPLHT---CKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWI 193
Query: 132 THFSWS--HDG---RMALICYQDGFVLV 154
T +W H R+ C +DG + +
Sbjct: 194 TSLAWQPMHKDPTCRLLASCGKDGNIFI 221
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 33.5 bits (73), Expect = 1.0
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 81 LRGHRSDVILVKW--NEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHFSWSH 138
LRGH +V+ V+W N Y S D +I+ K R I ++ND PV SW
Sbjct: 129 LRGHSMEVLTVEWSPNGKYLASGSIDYRIIIYNARKLPDR--ITVLNDIQLPVKGLSWDP 186
Query: 139 DGR 141
G+
Sbjct: 187 IGK 189
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 33.5 bits (73), Expect = 1.0
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 81 LRGHRSDVILVKW--NEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHFSWSH 138
LRGH +V+ V+W N Y S D +I+ K R I ++ND PV SW
Sbjct: 417 LRGHSMEVLTVEWSPNGKYLASGSIDYRIIIYNARKLPDR--ITVLNDIQLPVKGLSWDP 474
Query: 139 DGR 141
G+
Sbjct: 475 IGK 477
>AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical
protein T21D12.11 protein.
Length = 709
Score = 33.5 bits (73), Expect = 1.0
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 598 SNDSPSHTNNNIRRKLTLSERINNTNNLINQSEIYNPNNNT 638
S DSPS +N + +LSE +NN N++ NQ E N NNN+
Sbjct: 16 SPDSPSSSNGS---STSLSENLNN-NSVSNQIEYVNQNNNS 52
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 639 SVPSLARAESYDEFPYIDTTDAVNNVPESVYTAAVRGSERRINSSAAVSGRHAISPLRCE 698
+VPS + + +D + T+ + +++++ A S R+ S+++ S P E
Sbjct: 441 NVPS-SNGDPFDSYDPRVLTETLTGHTDAIWSVAYHSSNSRLVSASSDSTVRLWEPGNGE 499
Query: 699 SSVPTLQSPKNAVAPTDIIF 718
+ T+ +PK+ + PT + F
Sbjct: 500 PLIRTIGAPKSGILPTSVDF 519
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 639 SVPSLARAESYDEFPYIDTTDAVNNVPESVYTAAVRGSERRINSSAAVSGRHAISPLRCE 698
+VPS + + +D + T+ + +++++ A S R+ S+++ S P E
Sbjct: 441 NVPS-SNGDPFDSYDPRVLTETLTGHTDAIWSVAYHSSNSRLVSASSDSTVRLWEPGNGE 499
Query: 699 SSVPTLQSPKNAVAPTDIIF 718
+ T+ +PK+ + PT + F
Sbjct: 500 PLIRTIGAPKSGILPTSVDF 519
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 81 LRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHFSWSHDG 140
L H V V +N +AS G++ +W G+ L++D + PV +S +G
Sbjct: 209 LPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNG 268
Query: 141 RMAL 144
+ L
Sbjct: 269 KYIL 272
>Z81589-9|CAJ85769.1| 926|Caenorhabditis elegans Hypothetical
protein T08G5.5b protein.
Length = 926
Score = 31.9 bits (69), Expect = 3.1
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 619 INNTNNLINQSEIYNPNNNTSVPSLARAESYDEFPYIDTTDAVNNVPESVYTAAVRGSER 678
++ + L+N + Y P+ NT++ LA+ IDT A+N +P T +R
Sbjct: 790 VSEASTLVNSTSSYQPDVNTAIKILAK-----HADKIDTVGALNMLPA---TTPLRVVFS 841
Query: 679 RINSSAAVSGRHAISPLRCESSV 701
IN+ +GR A S + E SV
Sbjct: 842 AINAVIQTTGRQA-STRKMEKSV 863
>Z81589-8|CAB04720.1| 923|Caenorhabditis elegans Hypothetical
protein T08G5.5a protein.
Length = 923
Score = 31.9 bits (69), Expect = 3.1
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 619 INNTNNLINQSEIYNPNNNTSVPSLARAESYDEFPYIDTTDAVNNVPESVYTAAVRGSER 678
++ + L+N + Y P+ NT++ LA+ IDT A+N +P T +R
Sbjct: 787 VSEASTLVNSTSSYQPDVNTAIKILAK-----HADKIDTVGALNMLPA---TTPLRVVFS 838
Query: 679 RINSSAAVSGRHAISPLRCESSV 701
IN+ +GR A S + E SV
Sbjct: 839 AINAVIQTTGRQA-STRKMEKSV 860
>Z46828-2|CAA86857.1| 434|Caenorhabditis elegans Hypothetical protein
R03D7.4 protein.
Length = 434
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 1197 KAQLRNKLKRGGNPASGNNTGESRNNNARRQLIMHNKAPM 1236
KAQLR RGG S + + + NNN L++ AP+
Sbjct: 385 KAQLRTITPRGGGVPSTSRSRSNNNNNMNNGLVVKKTAPL 424
>Z32679-3|CAA83596.1| 401|Caenorhabditis elegans Hypothetical protein
C05B5.3 protein.
Length = 401
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 1179 NGYNEVNSKNYRDLESFQKAQLRNKLKRGGNPASGNNTGESRNNNARRQLIMHNKAPMWN 1238
NG N NS N + + A N + GNN +N+N + Q +N+ +WN
Sbjct: 227 NGQNFGNSGNQNGVNPYSGA-FSNGQNQNQQGFFGNNQNNQQNSNGQVQGSQNNQ--IWN 283
Query: 1239 ENSQVYQLDFGGRVTQESAK 1258
+N L FG + + +
Sbjct: 284 QNQNPNILPFGPNLVNSNTQ 303
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 31.9 bits (69), Expect = 3.1
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 9/142 (6%)
Query: 589 EEEVFHSNDSNDSPSHTNNNIRRKLTLSERINNTNNLINQSEIYNPNNNTSVPSLARAES 648
E ++FH SP T N+ +R T+S + +EI ++ P+ +
Sbjct: 163 ELDIFHDYSKEASP--TRNSTKRPSTVSVHERKPKRTL--TEILQ--RRSTAPAATGVAT 216
Query: 649 YDE-FPYIDTTDAVNNVPESVYTAAVRGSERRINSSAAVSGRHAISPLRCESSVPTLQSP 707
Y + F + E +++ A+ ++R+ + SA+ + + P E T +S
Sbjct: 217 YAQAFGSSSNPVKAEIIEEDIFSKAIPLTKRQASMSASAKKQPKLEPEEPEEVPSTSRSR 276
Query: 708 KNAVAPTDIIFERPSPQTVSCG 729
KN++ I ER S +S G
Sbjct: 277 KNSIKSDKI--ERRSQSPMSFG 296
>Z79756-3|CAB02121.1| 527|Caenorhabditis elegans Hypothetical
protein F53C11.4 protein.
Length = 527
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 578 PSFKPNIFSEDEEEVFHSNDSNDSPSHTNNNIRRK--LTLSERINNTNNLINQSEIYN 633
P P FSED+E+ FH D + S RK ++ SERI T L N + N
Sbjct: 428 PPLIPLRFSEDDEDAFHETDDSSSDCCVLPAAPRKKSVSFSERIEQT-RLFNSNTSIN 484
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 76 RTNYNLRGHRSDVILVKWN--EPYQKLASCDSSGVIFVW 112
R Y+L GHR V V WN +P L SC + I VW
Sbjct: 556 RPRYSLVGHRGHVNAVAWNPADP-TMLVSCGADATIRVW 593
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 30.7 bits (66), Expect = 7.2
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 78 NYNLRGHRSDVILVKWNEPYQKLASCDSSGVIFVWIKYEGRWSIELINDRSTPVTHFSWS 137
NY S V+L NE +A+ S+G IFVW + + +L ++ + SW+
Sbjct: 503 NYRTSSDLSRVVLSSGNE---YVAAGSSNGSIFVWNRNSTKLEKQLCSNSENAIFSLSWN 559
Query: 138 HDGRMALICYQDGFV 152
G L + FV
Sbjct: 560 PTGYGLLSSSKQKFV 574
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 71 HELPLRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGVIFVW 112
H++ L L GHR V VK+ + KLASC I +W
Sbjct: 509 HKMQLGIAGTLSGHRRGVGDVKFAKNSHKLASCSGDMTIKIW 550
>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 62
protein.
Length = 1256
Score = 30.3 bits (65), Expect = 9.5
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 554 LHLQPRQMTLTITELRDDYPVGPD--PSFKPNIFSEDEEEVFHSNDSNDSPSHTNNNI-- 609
L L+ +++ T+L+ + G PSF+ N ++D+ D H+ N+I
Sbjct: 186 LSLKQPHLSMNSTQLQSGFQTGNRMMPSFQVNPTTQDQVPHLSHMDQPPPTQHSMNSISQ 245
Query: 610 --RRKLTLSERINNTNNLINQSEIYNPNNNTSVPSL 643
+ LS+ N+N + Q+ + +P++ S SL
Sbjct: 246 SQQHPSQLSQLSCNSNQMSVQNHVLSPSSTNSNMSL 281
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.132 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,575,262
Number of Sequences: 27539
Number of extensions: 1222299
Number of successful extensions: 3004
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2965
Number of HSP's gapped (non-prelim): 46
length of query: 1306
length of database: 12,573,161
effective HSP length: 90
effective length of query: 1216
effective length of database: 10,094,651
effective search space: 12275095616
effective search space used: 12275095616
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
- SilkBase 1999-2023 -