Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002418-TA|BGIBMGA002418-PA|IPR014021|Helicase
superfamily 1 and 2 ATP-binding, IPR001650|Helicase, C-terminal,
IPR001098|DNA-directed DNA polymerase, IPR014001|DEAD-like helicases,
N-terminal, IPR010995|Rad51, N-terminal, IPR002298|DNA polymerase A,
IPR011545|DEAD/DEAH box helicase, N-terminal
(1486 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 31 0.078
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 24 6.7
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 24 6.7
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 24 6.7
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 24 6.7
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 24 8.9
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 24 8.9
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 24 8.9
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 30.7 bits (66), Expect = 0.078
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 439 FKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQMSGRAGRMGRDTKGE 498
FK+G +VLVAT + G+++ + +I + P +I Y GR GR+G K
Sbjct: 455 FKTGHRKVLVATGVAARGLDIKDVQHVINYDL----PKSIDEYVHRIGRTGRVGNKGKAT 510
Query: 499 S 499
S
Sbjct: 511 S 511
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 24.2 bits (50), Expect = 6.7
Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 660 LNLWESLTKAMKKVGELVGVQ---ESFIIKCLRGLNMKHLDSNKLNIHKRFYTAL 711
LNLW + ++G+++G+Q E +++ L+ ++++ + +H F +L
Sbjct: 222 LNLWARSRRYTTELGQVLGLQTTDERKVLEVLQKMSVEEMYLAAEKVHDPFIASL 276
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 24.2 bits (50), Expect = 6.7
Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 660 LNLWESLTKAMKKVGELVGVQ---ESFIIKCLRGLNMKHLDSNKLNIHKRFYTAL 711
LNLW + ++G+++G+Q E +++ L+ ++++ + +H F +L
Sbjct: 222 LNLWARSRRYTTELGQVLGLQTTDERKVLEVLQKMSVEEMYLAAEKVHDPFIASL 276
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 24.2 bits (50), Expect = 6.7
Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 660 LNLWESLTKAMKKVGELVGVQ---ESFIIKCLRGLNMKHLDSNKLNIHKRFYTAL 711
LNLW + ++G+++G+Q E +++ L+ ++++ + +H F +L
Sbjct: 222 LNLWARSRRYTTELGQVLGLQTTDERKVLEVLQKMSVEEMYLAAEKVHDPFIASL 276
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 24.2 bits (50), Expect = 6.7
Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 660 LNLWESLTKAMKKVGELVGVQ---ESFIIKCLRGLNMKHLDSNKLNIHKRFYTAL 711
LNLW + ++G+++G+Q E +++ L+ ++++ + +H F +L
Sbjct: 221 LNLWARSRRYTTELGQVLGLQTTDERKVLEVLQKMSVEEMYLAAEKVHDPFIASL 275
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 23.8 bits (49), Expect = 8.9
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 70 AEGKLTASKEVRNTQKIQSKKLKDWGL---PIEISKKYEERGITEMFDWQLACLCNTKVL 126
AE T SK + + +K+ ++ G+ PI +K YE + + + L C + V+
Sbjct: 743 AETVRTVSKIPPLYKDLVAKRCEERGILFVPIP-NKYYEAKQVYRIGSNGLQCYIDRNVV 801
Query: 127 FDCANLVYSAPTSAGKTL 144
F N PTS + L
Sbjct: 802 FSSQNNTNWVPTSLNRLL 819
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 23.8 bits (49), Expect = 8.9
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 549 QELLLYTDCTLLSAQKEILSQNLILEDTLKELENYELIRIQNNHSENHYVATALGKACLS 608
Q L+ C L L+ NL L L+ + L RI+ + +N V+ + S
Sbjct: 167 QAYTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKNIIVSL---RQIGS 223
Query: 609 SSMAPNDGLTLFCELQKARQCLVLETDLHLIYLVT 643
S ++ + LF ++ CL+L T ++ L+T
Sbjct: 224 LSQLLSETVALFNDV--FGTCLILITGKSIVQLLT 256
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 23.8 bits (49), Expect = 8.9
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 549 QELLLYTDCTLLSAQKEILSQNLILEDTLKELENYELIRIQNNHSENHYVATALGKACLS 608
Q L+ C L L+ NL L L+ + L RI+ + +N V+ + S
Sbjct: 167 QAYTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKNIIVSL---RQIGS 223
Query: 609 SSMAPNDGLTLFCELQKARQCLVLETDLHLIYLVT 643
S ++ + LF ++ CL+L T ++ L+T
Sbjct: 224 LSQLLSETVALFNDV--FGTCLILITGKSIVQLLT 256
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.318 0.133 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 313,570
Number of Sequences: 317
Number of extensions: 12846
Number of successful extensions: 47
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 46
Number of HSP's gapped (non-prelim): 8
length of query: 1486
length of database: 114,650
effective HSP length: 66
effective length of query: 1420
effective length of database: 93,728
effective search space: 133093760
effective search space used: 133093760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)
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