Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002418-TA|BGIBMGA002418-PA|IPR014021|Helicase
superfamily 1 and 2 ATP-binding, IPR001650|Helicase, C-terminal,
IPR001098|DNA-directed DNA polymerase, IPR014001|DEAD-like helicases,
N-terminal, IPR010995|Rad51, N-terminal, IPR002298|DNA polymerase A,
IPR011545|DEAD/DEAH box helicase, N-terminal
(1486 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 146 2e-35
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 136 2e-32
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 130 1e-30
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 81 2e-15
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 72 5e-13
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 71 2e-12
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 52 6e-07
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 44 2e-04
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 42 6e-04
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 42 6e-04
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 40 0.002
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 40 0.003
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 39 0.005
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 39 0.005
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 39 0.006
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 39 0.006
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 37 0.018
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 36 0.043
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 36 0.043
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 36 0.056
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 34 0.13
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 34 0.13
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 33 0.23
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 33 0.30
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 33 0.40
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 32 0.52
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 31 0.92
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 30 2.1
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 30 2.1
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 30 2.8
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 30 2.8
SPAC11D3.08c |||amino acid permease, unknown 1|Schizosaccharomyc... 29 3.7
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 29 4.9
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 29 6.5
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 29 6.5
SPBC21C3.18 |spo4||serine/threonine protein kinase Spo4|Schizosa... 29 6.5
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 29 6.5
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 6.5
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 28 8.5
SPAC30.03c |tsn1|tsn, mug90|translin|Schizosaccharomyces pombe|c... 28 8.5
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 28 8.5
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 146 bits (354), Expect = 2e-35
Identities = 122/442 (27%), Positives = 217/442 (49%), Gaps = 43/442 (9%)
Query: 131 NLVYSAPTSAGKTLVAEILTIKTVLERQK-KVIIILPFVSIVREKMF-YLQNILSSSGIR 188
N+ APT +GKT+ AE+ T + + K KV+ I P ++V+E++ + ++ GI
Sbjct: 1152 NIFVGAPTGSGKTMAAELATWRALHNYPKSKVVYIAPMKALVKERVKDWGHRLVEPMGIS 1211
Query: 189 VEGFMGSQSP-AGGMQNVHVAICTIEKANSMINRLLDNGNIEDLGAVVVDELHLLGDQNR 247
+ G +P + N ++ I T EK + + ++D+ +++DE+HLLG +R
Sbjct: 1212 MIELTGDTNPDVKAVTNANIIITTPEKWDGITRSWKSRKYVQDVSLIILDEIHLLGS-DR 1270
Query: 248 GYILELLLTKIKYVTSKSDLLIQVIGMSATLPNLETLATWLNAELFITTF----RPIPLE 303
G +LE++++++ YV S+++ ++V+G+S + N LA WLN + F RP+PLE
Sbjct: 1271 GPVLEMIVSRMNYVASQTNKKVRVLGLSTAVANANDLANWLNIRDGLFNFRHSVRPVPLE 1330
Query: 304 EYCLVENKYYDKNGKYILEAKSSNYGVSCNDSVLKICLETIKEGCSVLIFCMTKNRCESL 363
Y ++ G+ +S N + ++T VLIF ++ +
Sbjct: 1331 IY--IDG----FPGRAYCPRM-----MSMNKPAFQ-AIKTHSPTQPVLIFVSSRRQTRLT 1378
Query: 364 AQLLSSTFCKIGCEGSEFGMILRSQLNSEHILEALEQLKNSPVGLDQILQKTISFGVGYH 423
A+ L + FC G E + + + E I+ +E D+ L+ + FG+ H
Sbjct: 1379 AKDLIA-FC--GLEDNPRRFLYMDEEELEMIVSEVE---------DKSLKLALPFGIALH 1426
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPI------N 477
HAGLT ++R I E F + +++L+ATSTL+ GVN PA VI++ + I +
Sbjct: 1427 HAGLTENDRKISEELFVNNKVQILIATSTLAWGVNTPAHLVIVKGTEYYDAKIGGYKDMD 1486
Query: 478 ILSYKQMSGRAGRMGRDTKGESILICSEAEKKIGFNLMMGDLDPVKSCI-ETKEKYMRAI 536
+ QM GRAGR D G + + + +K + + PV+S + + + ++ A
Sbjct: 1487 LTDVLQMLGRAGRPQFDNSGVARIFVQDIKKSFYKHFLHSGF-PVESYLHKVLDNHLNA- 1544
Query: 537 LEIIASNISCSKQELLLYTDCT 558
EI I C Q + + CT
Sbjct: 1545 -EIATGTIDCI-QGAMDFLTCT 1564
Score = 117 bits (281), Expect = 1e-26
Identities = 109/426 (25%), Positives = 206/426 (48%), Gaps = 55/426 (12%)
Query: 131 NLVYSAPTSAGKT---LVAEILTIKTVLERQK---------------KVIIILPFVSIVR 172
N++ APT AGKT L+A + TI +E K++ I P ++
Sbjct: 295 NMLICAPTGAGKTDVALLAMLQTISNYVESMNLMDESEPLDVHRDDFKIVYIAPMKALAA 354
Query: 173 EKMFYLQNILSSSGIRVEGFMGS-QSPAGGMQNVHVAICTIEKANSMINRLLDNGNI-ED 230
E + + L+ G++ G Q + + + T EK + + + + + + E
Sbjct: 355 EVVEKMGKRLAWLGLKTRELTGDMQLTKTEIAETQILVTTPEKWDVVTRKSVGDTQLAEK 414
Query: 231 LGAVVVDELHLLGDQNRGYILELLLTKIKYVTSKSDLLIQVIGMSATLPNLETLATWLNA 290
+ V++DE+H+L D+ RG ++E L+ + + + S +I+++G+SATLPN +A +L
Sbjct: 415 VRLVIIDEVHMLHDE-RGAVIESLVARTQRLVETSQQMIRIVGLSATLPNYLDVADFLGV 473
Query: 291 E------LFITTFRPIPLEEYCLVENKYYDKNGKYILEAKSSNYGVSCNDSVLKICLETI 344
F + FRP P+E++ + K + +SN +C D VLK+ I
Sbjct: 474 NRYKGLFYFSSAFRPCPIEQHFI--------GAKGSPKIVNSNIDEACFDKVLKL----I 521
Query: 345 KEGCSVLIFCMTKNRCESLAQLLSSTFCKIGCEGSEFGMILRSQLNSEHILEALEQLKNS 404
+EG V+IF ++ + A+ L F G E ++ NS+H +L Q ++
Sbjct: 522 QEGHQVMIFVHSRKETINSAKKLREQFFHEG----EADLLD----NSQHEKYSLAQ-RDV 572
Query: 405 PVGLDQILQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKV 464
++ L++ + +G H+AG+ +R + E F G +++L T+TL+ GVNLPA V
Sbjct: 573 SKSKNKELKELFKYSMGIHNAGMLRSDRHLTERLFSMGILKILCCTATLAWGVNLPAYAV 632
Query: 465 IIR-SPVFQKQ-----PINILSYKQMSGRAGRMGRDTKGESILICSEAEKKIGFNLMMGD 518
+I+ + ++ Q + +L Q+ GRAGR ++ + +I + +K + ++
Sbjct: 633 LIKGTQLYDPQKGSFVDLGVLDVLQIFGRAGRPQFESSAVAYIITTH-DKLSHYISVVTQ 691
Query: 519 LDPVKS 524
P++S
Sbjct: 692 QSPIES 697
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 136 bits (329), Expect = 2e-32
Identities = 126/439 (28%), Positives = 214/439 (48%), Gaps = 54/439 (12%)
Query: 131 NLVYSAPTSAGKTLVAEILTIKTVLERQK----------KVIIILPFVSIVREKMFYLQN 180
N++ APT AGKT VA + + + + + K++ I P ++V+E +
Sbjct: 537 NILLCAPTGAGKTNVAMLCILNELQKHLREDLSFNLQNFKIVYIAPLKALVQEMVNNFSK 596
Query: 181 ILSSSGIRVEGFMG-SQSPAGGMQNVHVAICTIEKANSMINRLLDNGNIEDLGAVVVDEL 239
L+ IRV G SQ + + + T EK + + + D + + V++DE+
Sbjct: 597 RLTPYNIRVAELTGDSQLTKQQISETQIIVTTPEKWDIITRKANDLSYVNLVRLVIIDEV 656
Query: 240 HLLGDQNRGYILELLLTKIKYVTSKSDLLIQVIGMSATLPNLETLATWLNAE------LF 293
HLL D+ RG +LE ++ +I ++ ++++G+SATLPN +A++L+ + F
Sbjct: 657 HLLHDE-RGPVLESIVARIFRHQEETLEQVRLVGLSATLPNYTDVASFLHVDPKKGLFYF 715
Query: 294 ITTFRPIPL-EEYCLVENKYYDKNGKYILEAKSSNYGVSCNDSVLKICLETIKEGCSVLI 352
+T+RP PL +E+ + K K + EA C + V++ + VLI
Sbjct: 716 DSTYRPCPLKQEFIGITEKTPFKRMQTTNEA--------CYEKVMQHAGKN-----QVLI 762
Query: 353 FCMTKNRCESLAQLLSSTFCKIGCEGSEFGMILRSQLNSEHILEALEQLKNSPVGLDQIL 412
F ++ A+ + E G +LRS S IL A E S D+ L
Sbjct: 763 FVHSRKETAKTARFIRDK----ALEEETIGHLLRSDAASREILRA-EADSTS----DENL 813
Query: 413 QKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIR-SPVF 471
+ + +G HHAG+ ++R E F G I+VLV+T+TL+ GVNLPA VII+ + V+
Sbjct: 814 KDLLPYGFAIHHAGMRREDRQTSEDLFADGTIQVLVSTATLAWGVNLPAHTVIIKGTQVY 873
Query: 472 QKQ-----PINILSYKQMSGRAGRMGRDTKGESILICSEAEKKIGFNLMMGDLDPVKSCI 526
+ ++ QM GRAGR DT GE I+I + +E + +LM L P++S
Sbjct: 874 SPEKGIWTELSPQDVLQMLGRAGRPQFDTYGEGIIITAHSELQYYLSLMNQQL-PIES-- 930
Query: 527 ETKEKYMRAILEIIASNIS 545
++MR + + + + +S
Sbjct: 931 ----QFMRRLADCLNAEVS 945
Score = 48.8 bits (111), Expect = 6e-06
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 136 APTSAGKTLVAEILTIKT-VLERQKKVIIILPFVSIV--REKMFYLQNILSSSGIRVEGF 192
AP +GKT+ AE+ + E + I P IV R + +Y + G +
Sbjct: 1387 APNGSGKTVCAELALLHHWSQEDYGTAVYIAPIQEIVDRRYEEWYGKFSDLGDGKVLVKL 1446
Query: 193 MGSQSPAGGM-QNVHVAICTIEKANSMINRLLDNGNIEDLGAVVVDELHLLGDQNRGYIL 251
G +S + Q + CT + +S+ R +I+ + + DEL LLG G +
Sbjct: 1447 TGERSQDLKLIQVADLIFCTPSQWDSLSKRWRSMRSIQKVDFYICDELQLLGGFY-GPLY 1505
Query: 252 ELLLTKIKYVTSKSDLLIQVIGMSATLPNLETLATWL 288
E+++++I+Y+ + + I+V+G+S ++ N L WL
Sbjct: 1506 EIVISRIRYMAVQLEKNIRVVGLSVSVANARDLGEWL 1542
Score = 31.5 bits (68), Expect = 0.92
Identities = 17/86 (19%), Positives = 44/86 (51%)
Query: 381 FGMILRSQLNSEHILEALEQLKNSPVGLDQILQKTISFGVGYHHAGLTLDERDIIEGAFK 440
F ++ S + + L +L + + D LQ+++ G+ Y + ++++I++ ++
Sbjct: 1613 FDLVTFSMADEDEYLFSLMENEAFNKVEDAALQQSLKHGIAYISEITSSNDQNIVQYLYR 1672
Query: 441 SGAIRVLVATSTLSSGVNLPARKVII 466
G I+VL+A+ + + + VI+
Sbjct: 1673 HGLIKVLIASRDVIYSLKAKSNAVIV 1698
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 130 bits (314), Expect = 1e-30
Identities = 130/431 (30%), Positives = 200/431 (46%), Gaps = 64/431 (14%)
Query: 131 NLVYSAPTSAGKTLVAEILTIKTVLERQKKVIIILPFVSIVREKMFYLQNILSSSGIRVE 190
+++ SA TSAGKT++AE I L+ +++VI P S+ +K + +LS G
Sbjct: 142 SVLVSAHTSAGKTVIAEY-AIAQALKNRQRVIYTSPIKSLSNQKY---RELLSEFGD--V 195
Query: 191 GFMGSQSPAGGMQNVHVAICTIEKANSMINRLLDNGNI-EDLGAVVVDELHLLGDQNRGY 249
G M G + A C I + L N I ++ V+ DE+H + D++RG
Sbjct: 196 GLM-----TGDVSINPSASCLIMTTEILRAMLYKNSEIMHEIAWVIFDEVHYMRDKDRGV 250
Query: 250 ILELLLTKIKYVTSKSDLLIQVIGMSATLPNLETLATWLN------AELFITTFRPIPLE 303
+ E L + I+ I +SATLPN A W++ + T +RP PL+
Sbjct: 251 VWEETLILLPDA-------IRFIFLSATLPNALQFARWISEIHKQPCHVVYTDYRPTPLQ 303
Query: 304 E----------YCLVE--NKYYDKNGKYILEA-----KSSNYGVSCNDSVLKICLETI-- 344
Y LV+ NK+ +N K +LE + NY S LE I
Sbjct: 304 HFIYPQGADGIYMLVDEKNKFKTENFKKVLEVLDHSTRQENYSKSSKKVKKSSSLERIIN 363
Query: 345 ----KEGCSVLIFCMTKNRCESLAQLLSSTFCKIGCEGSEFGMILRSQLNSEHILEALEQ 400
+++FC +K CE A F K+ +E +L +E A+ Q
Sbjct: 364 MVLSNRYDPIIVFCFSKKECEINAH----QFGKLDLNDTE-----NKELVTEIFDSAINQ 414
Query: 401 LKNSPVGLDQI--LQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVN 458
L GL Q ++ + G+G HH+GL ++++E F+ G +R+L AT T S G+N
Sbjct: 415 LSEEDRGLRQFEEMRSLLLRGIGIHHSGLLPILKELVEILFQEGLVRILFATETFSIGLN 474
Query: 459 LPARKVII-RSPVFQKQPINILS---YKQMSGRAGRMGRDTKGESILICSEA-EKKIGFN 513
+PAR V+ ++ F L+ Y QMSGRAGR G DTKG SI+I ++ +++
Sbjct: 475 MPARTVLFTKAQKFSGNNFRWLTSGEYMQMSGRAGRRGIDTKGLSIVILDQSIDEQAARC 534
Query: 514 LMMGDLDPVKS 524
LM G D + S
Sbjct: 535 LMNGQADVLNS 545
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 80.6 bits (190), Expect = 2e-15
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 13/224 (5%)
Query: 322 EAKSSNYGVSCNDSVLKIC-LETIKEGCSVLIFCMTKNRCESLAQLLSSTFCKIGCEGSE 380
+ K+ GV + KI + +K V++F +K CE+LA +S E
Sbjct: 428 KGKTGKGGVKGPSDIYKIVKMIMVKNYNPVIVFSFSKRECEALALQMSKLDMNDQTERDL 487
Query: 381 FGMILRSQLNSEHILEALEQLKNSPVGLDQILQKTISFGVGYHHAGLTLDERDIIEGAFK 440
I + +N + E+ + P ++ IL + G+G HH+GL +++IE F+
Sbjct: 488 VTTIFNNAVN-----QLSEKDRELPQ-IEHILP-LLRRGIGIHHSGLLPILKEVIEILFQ 540
Query: 441 SGAIRVLVATSTLSSGVNLPARKVIIRS-PVFQKQPINILS---YKQMSGRAGRMGRDTK 496
G ++VL AT T S G+N+PA+ V+ + F + +S Y QMSGRAGR G D +
Sbjct: 541 EGLLKVLFATETFSIGLNMPAKTVVFTNVRKFDGKTFRWISGGEYIQMSGRAGRRGLDDR 600
Query: 497 GESILICSE-AEKKIGFNLMMGDLDPVKSCIETKEKYMRAILEI 539
G IL+ E + + +++ G+ D + S + +L +
Sbjct: 601 GIVILMIDEKMDPPVAKSMLKGEADRLDSAFHLSYNMILNLLRV 644
Score = 52.8 bits (121), Expect = 3e-07
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 131 NLVYSAPTSAGKTLVAEILTIKTVLERQKKVIIILPFVSIVREKMFYLQNILSSSGIRVE 190
+++ SA TSAGKT+VAE +++ ++Q +VI P ++ +K + +L+ G
Sbjct: 215 SVLVSAHTSAGKTVVAEYAVAQSLRDKQ-RVIYTSPIKALSNQK---YRELLAEFG--DV 268
Query: 191 GFMGSQSPAGGMQNVHVAICTIEKANSMINRLLDNGNIEDLGAVVVDELHLLGDQNRGYI 250
G M + + T E SM+ R + + ++ V+ DE+H + D+ RG +
Sbjct: 269 GLMTGDVTIN--PDATCLVMTTEILRSMLYR--GSEVMREVAWVIFDEIHYMRDKERGVV 324
Query: 251 LELLLTKIKYVTSKSDLLIQVIGMSATLPNLETLATWLN------AELFITTFRPIPLEE 304
E I + KS + +SAT+PN A W+ + T FRP PL+
Sbjct: 325 WE---ETIILLPDKSHFVF----LSATIPNAMQFAEWITKIHRQPCHVVYTDFRPTPLQH 377
Query: 305 Y 305
Y
Sbjct: 378 Y 378
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 72.1 bits (169), Expect = 5e-13
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Query: 350 VLIFCMTKNRCESLAQLLSSTFCKIGCEGSEFGMILRSQLNSEHILEALEQLKNSPVGLD 409
V++F +K RCE L++ E SE +++ +A+ +LK L
Sbjct: 553 VIVFVFSKKRCEEYVDTLTNRDLNNHQEKSEVHVVIE---------KAVARLKKEDRLLP 603
Query: 410 QI--LQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIR 467
QI +++ +S G+ HH GL ++I+E F+ G ++VL AT T + GVN+PA+ V+
Sbjct: 604 QIGRMREMLSRGLAVHHGGLLPIIKEIVEILFQRGLVKVLFATETFAMGVNMPAKSVVFS 663
Query: 468 SPVFQ--KQPINIL--SYKQMSGRAGRMGRDTKGESILICSEAE 507
+ ++L Y Q SGRAGR G D G +++I S +E
Sbjct: 664 GTQKHDGRNFRDLLPGEYTQCSGRAGRRGLDVTG-TVIILSRSE 706
Score = 61.7 bits (143), Expect = 7e-10
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 29/204 (14%)
Query: 135 SAPTSAGKTLVAEILTIKTVLERQKKVIIILPFVSIVREKMFYLQNILSSSGIRVEGFMG 194
+A TSAGKT+VAE I + K I P ++ +K ++ GI + G +
Sbjct: 301 AAHTSAGKTVVAEY-AIALAQKHMTKAIYTSPIKALSNQKFRDFKHKFEDVGI-LTGDV- 357
Query: 195 SQSPAGGMQNVHVAICTIEKANSMINRLLDNGNIEDLGAVVVDELHLLGDQNRGYILELL 254
+P G + T E SM+ R D I D+ V+ DE+H + D RG + E +
Sbjct: 358 QVNPEGSC-----LLMTTEILRSMLYRGADL--IRDVEFVIFDEVHYVNDLERGVVWEEV 410
Query: 255 LTKI-KYVTSKSDLLIQVIGMSATLPNLETLATWL------NAELFITTFRPIPLEEYCL 307
+ + +VT +I +SAT+PN + A+W+ N + T RP+PLE Y
Sbjct: 411 IIMLPPHVT--------LILLSATVPNTKEFASWVGRTKKKNIYVISTLKRPVPLEHYLW 462
Query: 308 VEN---KYYDKNGKYILEA-KSSN 327
V+ K D++G+++++ KS+N
Sbjct: 463 VKQNMFKIVDQHGRFLMDGYKSAN 486
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 70.5 bits (165), Expect = 2e-12
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 386 RSQLNSEHILEALEQLKNSPVGLDQILQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIR 445
+S E + LE L+ + + + G+G HH+GL R I+E F+ G +
Sbjct: 1192 KSTYGKEELYRDLEALRRRQA-VPEWYVDALYRGIGIHHSGLNRRYRQIVEVLFRCGQLT 1250
Query: 446 VLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQMSGRAGRMGRDTKG 497
V++AT TLS G+N+P R V+ Q +N L++ Q +GRAGR G D G
Sbjct: 1251 VVIATRTLSLGINMPCRTVVFLGDSLQ---LNALNFHQAAGRAGRRGFDLLG 1299
Score = 32.7 bits (71), Expect = 0.40
Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 15/161 (9%)
Query: 136 APTSAGKTLVAEILTIKTVLERQKKVII-ILPFVSIVR----EKMFYLQNILSSSGIRVE 190
APTS+GKT ++ K + + V+I + P ++V E +G V
Sbjct: 757 APTSSGKTFISFYAMEKVLRDNDDGVVIYVAPTKALVNQLSAEVYARFNKHYPHAGQTVW 816
Query: 191 GFMGSQSPAGGMQNVHVAICTIEKANSM-INRLLDNGNIEDLGAVVVDELHLLGDQNRGY 249
N V I SM + L N + ++ DE+H +G G
Sbjct: 817 SVYTRDYRINNPTNCQVLITVPHVLQSMLLQPALANAWCPKIRRIIFDEIHCIGQMEDGL 876
Query: 250 ILELLLTKIKYVTSKSDLLIQVIGMSATLPNLETLATWLNA 290
+ E LL ++ +SAT+ N + WL+A
Sbjct: 877 VEEQLLLLAP---------CPIVALSATVGNPQEFQVWLSA 908
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 52.0 bits (119), Expect = 6e-07
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 422 YHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSY 481
++HAGL ER I+ ++SG+ +++VAT GV+ K +R + P ++ Y
Sbjct: 772 HYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGMGVD----KGDVRFVIHHSFPKSLEGY 827
Query: 482 KQMSGRAGRMGRDTKGESILICSEAEKKIGFNLMM-GDLDPVKSCIETKEKYMRAILEII 540
Q +GRAGR G+ I+ S + L+M GD D E + + +R +++
Sbjct: 828 YQETGRAGRDGK--PAHCIMFYSYKDHVTFQKLIMSGDGDAETK--ERQRQMLRQVIQFC 883
Query: 541 ASNISCSKQELLLY 554
+ C ++++L Y
Sbjct: 884 ENKTDCRRKQVLAY 897
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 43.6 bits (98), Expect = 2e-04
Identities = 59/282 (20%), Positives = 121/282 (42%), Gaps = 24/282 (8%)
Query: 100 ISKKYEERGITEMFDWQLACLCNTKVLFDCANLVYSAPTSAGKTLVAEILTIKTVLE-RQ 158
I+ Y R I + + Q + + L++ +++ S TS+GK+L+ +I ++++LE Q
Sbjct: 300 INALYTSRNIEKTYKHQADAINH---LWNGFHVIVSTSTSSGKSLIYQIPILQSLLEDNQ 356
Query: 159 KKVIIILPFVSIVREKMFYLQNILSS----SGIRVEGFMGSQSPAGGMQNVHVAICTIEK 214
+ P S+ +++ L +ILS IRV+ F G + A
Sbjct: 357 STAFFVFPTKSLAQDQKKSLIDILSYMPTLKNIRVDTFDGDTPLESRESIIRSANIIFTN 416
Query: 215 ANSMINRLLDNGN-----IEDLGAVVVDELHLLGDQNRGYILELLLTKIKYVTSKSDLLI 269
+ + +L N N ++L V+DE H+ ++ +L + +
Sbjct: 417 PDMLHQTILPNANRWYYFFKNLKLFVLDEAHVYNGIFGVHVAFVLRRMRRIAEYFGNSQY 476
Query: 270 QVIGMSAT----LPNLETLATWLNAELFITTFRPIPLEEYCLVENKYYDKNGKYILEAKS 325
+ + SAT L +++ + N +L T P +++ + Y D K+ + K
Sbjct: 477 RFVSCSATIEDPLQHMKKIFGVDNIKLINYTSSPSGSKKFVMWNPPYVDP--KHPDDGKK 534
Query: 326 SNYGVSCNDSVLKICLETIKEGCSVLIFCMTKNRCESLAQLL 367
S +S K+ ++ ++ ++FC + CESL +L+
Sbjct: 535 S--AIS---EASKLLIKFAEKRVRTIVFCRVRKTCESLMRLV 571
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 418 FGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPIN 477
F V H + +RD + F++G+ R+L+ T L+ G+++ ++I + P N
Sbjct: 283 FTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDL----PAN 338
Query: 478 ILSYKQMSGRAGRMGRDTKGESI 500
+Y GR GR GR KG SI
Sbjct: 339 RENYIHRIGRGGRFGR--KGVSI 359
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 41.9 bits (94), Expect = 6e-04
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 23/249 (9%)
Query: 879 DEDLAATTTNNIKNSVTSRNTSEKDIS-------LFSSDGDNSSLFEDSLPLDLIPSKLL 931
D + T+++ N + S T ++I L +S + +L E ++ L + +K L
Sbjct: 450 DNNSLRLMTSSLGNQIESLRTQNREIDEEKNHLRLLASKNSDKALAETNIRLQEV-TKEL 508
Query: 932 QDVETPNKREQLEDFYKIKSSN-GLXXXXXXXXXXXMKLVYEEDQADKTNEVKNSIKDKP 990
+ + N + L + + ++ N GL +L+ E +Q K+ EV S +
Sbjct: 509 ETLRMKNSND-LNEIHDLREENEGLTLKIDSITKEKDRLINELEQRIKSYEVNVSELNGT 567
Query: 991 LQLFKSPIKRCCETDSIQTVIKKIKVDMKKYSGMDLAQLTIKVNNRQTKLKNLTLAQESC 1050
+ +++ +K ET V+ + Y DL + +N Q + K LT E
Sbjct: 568 IDEYRNKLKDKEET--YNEVMNAFQ-----YKDNDLRRFHESINKLQDREKELTSNLEK- 619
Query: 1051 VKAWAIEMISEKQQNALYESYQNAINVEIKV-LKILSNCELHGIVVDK-ELVSRLLTDVR 1108
K I + E A+ E + +I + K L N L I+ DK ++ R LTDV+
Sbjct: 620 -KNLVISSLRETV--AMLEKERESIKKYLSGNAKDLDNTNLMEILNDKISVLQRQLTDVK 676
Query: 1109 DSQDVLQKK 1117
D DV +++
Sbjct: 677 DELDVSEEE 685
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 40.3 bits (90), Expect = 0.002
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 411 ILQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPV 470
IL +T+ F H L+ R FKSGA LVAT + G+++P V+I +
Sbjct: 303 ILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDI 362
Query: 471 FQKQPINILSYKQMSGRAGRMGRDTKGESILICSE 505
P + +Y GR R GR G+SI + ++
Sbjct: 363 ----PTDSKAYIHRVGRTARAGR--AGKSIALVTQ 391
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 39.9 bits (89), Expect = 0.003
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 403 NSPVGLDQILQKT--ISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLP 460
NS +D + +K +F V H + ERD I F+ G RVL+ T + G+++
Sbjct: 268 NSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQ 327
Query: 461 ARKVIIRSPVFQKQPINILSYKQMSGRAGRMGRDTKGESILICSEAEKKI 510
++I + P N +Y GR+GR GR KG +I + + +I
Sbjct: 328 QVSLVINYDL----PANRENYIHRIGRSGRFGR--KGVAINFVTNEDVRI 371
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H+ + ER G F++ A ++LVAT S G+++P+ +++I + P + Y
Sbjct: 289 HSEMVQRERINSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDL----PRDPDDYIH 344
Query: 484 MSGRAGRMGRDTKGESILICSEAE 507
GR R GR GESI I +E +
Sbjct: 345 RVGRTARAGR--SGESISIVTERD 366
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 39.1 bits (87), Expect = 0.005
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 417 SFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPI 476
SF G + L+ DER I F +G + +LV + ++ G+++ + +I P+
Sbjct: 461 SFSCGLFTSSLSRDERKKIISRFATGDLNLLVCSDLMARGIDVANTQNVIN----YDPPL 516
Query: 477 NILSYKQMSGRAGRMGRD 494
++ SY GR R GR+
Sbjct: 517 SVRSYVHRIGRTARAGRE 534
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 38.7 bits (86), Expect = 0.006
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 408 LDQILQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIR 467
LD++L++ +F H GL +ER AFK R+ VAT G+++ ++I
Sbjct: 311 LDRLLREC-NFPSICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVIN 369
Query: 468 SPVFQKQPINILSYKQMSGRAGRMGRDTKGESILICSEAE 507
P + SY GRAGR G TKG +I S E
Sbjct: 370 ----YDMPDSPDSYLHRVGRAGRFG--TKGLAITFSSSEE 403
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H+GLT +R I +F+ +L AT ++ G++ P +++ P N Y
Sbjct: 324 HSGLTTAQRRSITESFRKCQSGILFATDVVARGMDFPNITQVVQIT----GPSNTDDYIH 379
Query: 484 MSGRAGRMGRDTKGESILICSEAEK 508
GR GR G+ GE+ LI E EK
Sbjct: 380 RIGRTGRAGK--TGEAYLILLEQEK 402
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 37.1 bits (82), Expect = 0.018
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 439 FKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQMSGRAGRMGRDTKGE 498
FKSG VLVAT + G+++P +++I P+ I Y GR GR +TKG
Sbjct: 462 FKSGKCPVLVATDVAARGLDIPKVQLVINVTF----PLTIEDYVHRIGRTGR--ANTKGT 515
Query: 499 SILICSEAEK 508
+I + +K
Sbjct: 516 AITFFTPQDK 525
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 35.9 bits (79), Expect = 0.043
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 431 ERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIR--SPVFQKQPINILSYKQMSGRA 488
+RD I +F+ G +VLV T+ ++ G+++ +++ P+ Q + +Y GR
Sbjct: 390 QRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNYDMPLDQAGRPDPQTYLHRIGRT 449
Query: 489 GRMGR 493
GR GR
Sbjct: 450 GRFGR 454
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 35.9 bits (79), Expect = 0.043
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H T ER+ F+SG ++VAT+ S G+++P +I + P +I Y
Sbjct: 461 HGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDL----PTDIDDYVH 516
Query: 484 MSGRAGRMGRDTKGESILICSEAEKKIGFNLM 515
GR GR G G+++ + K I L+
Sbjct: 517 RIGRTGRAG--NTGQAVAFFNRNNKGIAKELI 546
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 35.5 bits (78), Expect = 0.056
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H G +RD +K+G VL+ATS ++ G+++ + ++++ P ++ Y
Sbjct: 699 HGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDC----PNHMEDYVH 754
Query: 484 MSGRAGRMGRDTKGESILICSEAEK 508
GR GR G T I E EK
Sbjct: 755 RVGRTGRAGH-TGVAVTFITPEQEK 778
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 430 DERDIIEGAFKS--GAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQMSGR 487
+ER + AF++ G R+++AT G+N ++++ + P + + Y Q +GR
Sbjct: 1456 EERQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGL----PASSMDYVQETGR 1511
Query: 488 AGRMGR 493
AGR G+
Sbjct: 1512 AGRDGK 1517
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 430 DERDIIEGAFKS--GAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQMSGR 487
+ER + AF++ G R+++AT G+N ++++ + P + + Y Q +GR
Sbjct: 1456 EERQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGL----PASSMDYVQETGR 1511
Query: 488 AGRMGR 493
AGR G+
Sbjct: 1512 AGRDGK 1517
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 439 FKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQMSGRAGRM 491
FK+G VL+AT+ G+++P+ ++IR + + + Y Q GRA M
Sbjct: 419 FKTGKYNVLIATAVAEEGIDVPSCNLVIRFNICR----TVTQYVQSRGRARAM 467
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 33.1 bits (72), Expect = 0.30
Identities = 45/213 (21%), Positives = 84/213 (39%), Gaps = 18/213 (8%)
Query: 39 KEYLEKSENKQKHVNRRFVNTASNNSLLNKTA-----EGKLTASKEVRNTQKIQSKKLKD 93
K+ E SE K+K +R T SL +K E ++ N+ +
Sbjct: 69 KDQKEASEKKKK--GKRTSPTIEMTSLGSKVTSKNYNEFSTLEEEDEHNSHGVDVSAWAH 126
Query: 94 WGLPIEISKKYEERGITEMFDWQLACLCNTKVLFDCANLVYSAPTSAGKTLVAEILTIKT 153
+ L E+ + G ++ Q + + FD ++ A T +GKTL I ++
Sbjct: 127 FSLSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFD---IIGKADTGSGKTLAFGIPILEH 183
Query: 154 VLE----RQKKVIIILPFVSIVREKMFYLQNILSSSGIRVEGFMGSQSPAGGMQ----NV 205
L + + +++ P + + + + I S IRV G + + +
Sbjct: 184 CLRNVDAKYVQALVVAPTRELAHQICQHFELIKPSPNIRVMSITGGLAVQKQQRLLNKHP 243
Query: 206 HVAICTIEKANSMINRLLDNGNIEDLGAVVVDE 238
HV + T + S+IN GN + + +V+DE
Sbjct: 244 HVVVATPGRLWSVINENNLTGNFKKIKCLVLDE 276
Score = 31.9 bits (69), Expect = 0.69
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
HA L +R FK+ VLV T + G+++P+ +I V P Y
Sbjct: 420 HAQLDQKKRLQSLEKFKNNPKGVLVCTDVAARGIDIPSVTHVIHYHV----PHTADMYVH 475
Query: 484 MSGRAGRMGRDTKGESILICSEAE 507
SGR R D G SIL+C E
Sbjct: 476 RSGRTARANED--GVSILMCGPKE 497
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 43 EKSENKQKHVNRRFVNTASNNSLLNKTAEGKLTA-SKEVRNTQKIQS 88
++S +Q H +NTA N+ L+ T EGK T+ SKE ++ + S
Sbjct: 200 DESNTEQDHSKESNLNTADNDLALSSTIEGKKTSTSKEALESESLLS 246
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 32.3 bits (70), Expect = 0.52
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H DERD + F++G ++VAT S G+++ + P N Y
Sbjct: 400 HGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDF----PGNTEDYVH 455
Query: 484 MSGRAGRMG 492
GR GR G
Sbjct: 456 RIGRTGRAG 464
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 31.5 bits (68), Expect = 0.92
Identities = 18/73 (24%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 25 FDNSFALQSSLVVVKEYLEKSENKQKHVNRRFVNTASNNSLLNKTAEGKLTASKEVRNTQ 84
FD +LQ ++ +V+ +EK E ++KH+ ++ +N A + +++ + + + ++E +N
Sbjct: 33 FDEEASLQRTVPLVESGVEKEEEEEKHL-QQVINEA-HEAIVRGSEKKLIIPTREAKNIG 90
Query: 85 KIQSKKLKDWGLP 97
I K++ LP
Sbjct: 91 IIDKYYKKNFILP 103
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 60 ASNNSLLNKTAEGKLTASKEVRNTQKIQSKKLKDWGLPIEI-SKKYEERGITEMFDWQLA 118
A++ + N +LT SK+ ++ +++ + ++ W +++ KKY I E F W LA
Sbjct: 401 ANDTHIFNTFFYNRLT-SKD-KDGKRLGHRGVRKWTQKVDLFHKKYIIVPINETFHWYLA 458
Query: 119 CLCN 122
+CN
Sbjct: 459 IICN 462
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 30.3 bits (65), Expect = 2.1
Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 24/201 (11%)
Query: 124 KVLFDCANLVYSAPTSAGKTLVAEILTIKTVLERQKKVIIIL----PFVSIVREKMFYLQ 179
K LF+ N++ + PT GKT +A ++ + + K I+ + P V+ E + +
Sbjct: 83 KALFE--NVLVALPTGLGKTFIAAVVMMNYLRWFPKSYIVFMAPTKPLVTQQMEACYKIT 140
Query: 180 NILSSSGIRVEGFMGSQSPAGGMQNVHVAICTIEK-ANSMINRLLDNGNIEDLGAVVVDE 238
I S + G + + Q+ +V T + N + + + D I +V+DE
Sbjct: 141 GIPKSQTAELSGHVPVTTRNQYYQSRNVFFVTPQTILNDIKHGICDRTRI---SCLVIDE 197
Query: 239 LHLLGDQNRGYILELLLTKIKYVTSKSDLLIQVIGMSATLPN-LETLATWLN----AELF 293
H N Y+ ++ ++ S S+ +++ +SAT N LE + ++ + +
Sbjct: 198 AH-RSTGNYAYV------EVVHLLSLSNKNFRILALSATPGNKLEAIQNVIDSLHISRIE 250
Query: 294 ITTFRPIPLEEYCLVENKYYD 314
I T I + +Y V+ K D
Sbjct: 251 IRTENSIDISQY--VQKKEVD 269
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 13 ILPEHVEFLDNCFDNSFALQSSLVVVKEYLEKSENKQKHVNRRFVNTASNNSLLNKTAEG 72
+LP + + D + A+ S+ ++LEK EN+ K VN++ + + S++
Sbjct: 594 LLPPSISWDDVFLSSEIAIACSIANRIDFLEK-ENRPKSVNKKILQQDKSKSMIELRCLR 652
Query: 73 KLTASKEVRNT 83
L + +R T
Sbjct: 653 LLEKQRSLRET 663
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 29.9 bits (64), Expect = 2.8
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 8/142 (5%)
Query: 7 DLIDTQILPEHVEFLDNCFDNSFALQSSLVVVKEYLEKSENKQKHVNRRFVNTASNNSLL 66
D+I Q+L H ++ A +S L ++ Y E K++ N AS +
Sbjct: 350 DIITEQVLTAHENYIKQLEAEVSANKSFLSLINRYASLIEGKKE--LEASSNDASRLTQR 407
Query: 67 NKTAEGKLTASKEVRNTQKIQSKKLKDWGLPIEISKKYEERGITEMF-DWQLACLC---- 121
+ G L +++R + K++ +P EI+ E G T +F D L +C
Sbjct: 408 GRRDPGLLLREEKIRKRLSRELPKVQSLLIP-EITAWEERNGRTFLFYDEPLLKICQEAT 466
Query: 122 NTKVLFDCANLVYSAPTSAGKT 143
K L+ A+ + P +A T
Sbjct: 467 QPKSLYRSASAAANRPKTATTT 488
>SPAC11D3.08c |||amino acid permease, unknown 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 550
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 112 MFDWQLACLCNTKVLFDCANLVYSAPTSAGKTLVAEILTIKTVLERQKKVIIILPFVSIV 171
++ W + C+C V L S PTS G L I T+ + R + + +VS++
Sbjct: 83 VWSWIIGCICLIPVSISLGELASSMPTSGG--LYFWIFTLASPSSR-AFLCWVCGYVSVL 139
Query: 172 REKMFYLQNILS-SSGIRVEGFMGSQS 197
Y + S SS ++ +GS S
Sbjct: 140 GYATIYASTVYSASSMVQALAVIGSPS 166
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 1095 VDKELVSRLLTDVRDSQDVLQK-KAFKICGYHFNFNSSKDVAKVL 1138
+D+ LV++ T +DS+ +LQK A G+ F S AKVL
Sbjct: 930 IDQTLVNKKETLAQDSESLLQKNNALNEKGFENQFGLSSSAAKVL 974
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 867 QTPYKLPKSCLSDEDLA-ATTTNNIKNSVTSRNTSEKDISLFSSDGDNSSLFEDSLPLDL 925
+ P K +S ++ E +T TNN KN T+ + +DI + GD+ L D +
Sbjct: 12 ENPGKQEESSIAVESREMSTATNNSKNIETTSSNGAEDIKIQRDVGDDKDL--DDKEAND 69
Query: 926 IPSKLLQDVETPNKREQLE 944
SK L++ R+ +E
Sbjct: 70 KSSKGLEEESDSKDRKTIE 88
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 28.7 bits (61), Expect = 6.5
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 31 LQSSLVVVKEYLEKSENK--QKHVNRRFVNTASNNSLLNKTAEGKLTASKEVRNTQKIQS 88
LQ L ++ L K+E ++ N + N L EGK+ + +E+ N K+Q
Sbjct: 606 LQEELSSTRKLLTKNEAAVAEQQSNEEMHSNEPNILNLYSVFEGKVDSLQELYNAFKLQL 665
Query: 89 KKLKDWGLPIEISKKYEE-RGITEMFDWQLA 118
LK G ++K E + I E D+ LA
Sbjct: 666 TSLKQKGEYATLAKDAEAVQHIIEERDYALA 696
>SPBC21C3.18 |spo4||serine/threonine protein kinase
Spo4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 148 ILTIKTVLERQKKVIIILPFVSIVREKMFYLQNILSSSG 186
+L + T + Q +V+I+LPF+ + FY++ L G
Sbjct: 122 VLNMITAVRHQDQVLIVLPFIQHAEFRDFYMKYSLPEIG 160
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 32 QSSLVVVKEYLEKSENKQKHVNRRFVNTASNNSLLNKTAEGKLTASKEVRNTQKIQSKK 90
+S+ V+KE K K ++ + S S ++ A K T K+ QKI SKK
Sbjct: 211 ESAAAVIKEDKVSDRKKSKKKPKKTPVSNSTASQASENASDKKTKEKKSSGKQKIASKK 269
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 28.7 bits (61), Expect = 6.5
Identities = 27/134 (20%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 987 KDKPLQLFKSPIKRCCETDSIQTVIKKIKVDMKKYSGMDLAQLTIKVNNRQTKLKNLTLA 1046
K K + + ++ C + S + K +D K +L L ++ + K ++ +
Sbjct: 456 KIKDFEKIEQDLRACLNSSSNELKEKSALIDKKD---QELNNLREQIKEQ----KKVSES 508
Query: 1047 QESCVKAWAIEMISEKQQNALYESYQNAINVEIKVLKILSNCE-----LHGIVVDKELVS 1101
+S +++ ++++EK+++ +YES N + E++ +SN E L + +KE
Sbjct: 509 TQSSLQSLQRDILNEKKKHEVYESQLNELKGELQT--EISNSEHLSSQLSTLAAEKEAAV 566
Query: 1102 RLLTDVRDSQDVLQ 1115
++ +S++ LQ
Sbjct: 567 ATNNELSESKNSLQ 580
Score = 28.7 bits (61), Expect = 6.5
Identities = 36/172 (20%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 971 YEEDQADKTNEVKNSIKDKPLQLF---KSPIKRCCETDSIQTVIKKIKVDMKK------Y 1021
+E+ ++ ++E N ++ K L+L KS IK+ + DS++ I+ +K D++K +
Sbjct: 649 FEQKESTLSDE-NNDLRTKLLKLEESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEEALRF 707
Query: 1022 SGMDLAQLTIKVNNRQTKLKNLTLAQESCVKAWAIEMISEKQQNALYESYQNAINVEIKV 1081
S ++ L ++N + K + L AQ + + + + K NA+ S + ++K
Sbjct: 708 SKLEAKNLREVIDNLKGKHETLE-AQRNDLHS---SLSDAKNTNAILSSELTKSSEDVK- 762
Query: 1082 LKILSNCELHGIVVDKELVSRLLTDVRDSQDVLQKKAFKICGYHFNFNSSKD 1133
++ +N E + D + + + T + +S + ++ H N S +
Sbjct: 763 -RLTANVET--LTQDSKAMKQSFTSLVNSYQSISNLYHELRDDHVNMQSQNN 811
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 1261 CQLEMRLLTHFSEDSALTRIMKSDVDVFKSIAASWSD 1297
C+L +RL + ++ A+ M+ + F+++++SWSD
Sbjct: 103 CRLLIRLYLLWQKNPAIIEPMEGHQNEFQAVSSSWSD 139
>SPAC30.03c |tsn1|tsn, mug90|translin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 380 EFGMILRSQLNSEHILEALEQLKNSPVGLDQI 411
E G+ L N E ILEALE +K+ GL ++
Sbjct: 56 EHGLTLEDLENQEEILEALEIIKSKTRGLAEL 87
>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 701
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 889 NIKNSVTSRNTSEKDISLFSSDGDNSSLFEDSLPLDLIPSKLLQDVETPNKREQL 943
N++NS +++T +KDIS F D +FE S + I S L + + PN + L
Sbjct: 481 NVENSQNAKDTIQKDISAFGKD-----IFELSAQSERILSNLAEK-KNPNTDQLL 529
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.133 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,405,660
Number of Sequences: 5004
Number of extensions: 268380
Number of successful extensions: 955
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 877
Number of HSP's gapped (non-prelim): 70
length of query: 1486
length of database: 2,362,478
effective HSP length: 82
effective length of query: 1404
effective length of database: 1,952,150
effective search space: 2740818600
effective search space used: 2740818600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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