Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002418-TA|BGIBMGA002418-PA|IPR014021|Helicase
superfamily 1 and 2 ATP-binding, IPR001650|Helicase, C-terminal,
IPR001098|DNA-directed DNA polymerase, IPR014001|DEAD-like helicases,
N-terminal, IPR010995|Rad51, N-terminal, IPR002298|DNA polymerase A,
IPR011545|DEAD/DEAH box helicase, N-terminal
(1486 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical ... 330 6e-90
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 218 3e-56
AC024819-4|AAU20828.1| 469|Caenorhabditis elegans Hypothetical ... 175 1e-43
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 130 7e-30
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 128 2e-29
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 105 2e-22
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p... 86 2e-16
Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical pr... 79 2e-14
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 48 7e-05
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 46 2e-04
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 45 4e-04
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 45 4e-04
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 45 4e-04
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 45 4e-04
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 43 0.002
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 43 0.002
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 42 0.003
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 42 0.003
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 42 0.003
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 42 0.004
Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical pr... 39 0.031
Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical pr... 39 0.031
Z38112-7|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 38 0.041
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 38 0.041
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 38 0.041
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 38 0.071
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 38 0.071
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 38 0.071
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 36 0.29
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 35 0.38
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 35 0.38
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 35 0.50
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 34 0.88
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 33 1.5
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 33 1.5
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 33 2.0
AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical ... 32 2.7
AF024500-6|AAB70361.1| 357|Caenorhabditis elegans Hypothetical ... 32 2.7
L10986-13|AAL08033.1| 140|Caenorhabditis elegans Hypothetical p... 32 3.6
Z67995-5|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 31 4.7
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 31 4.7
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 31 4.7
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 31 4.7
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 31 4.7
AF040657-5|AAB95052.1| 317|Caenorhabditis elegans Hypothetical ... 31 4.7
AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical ... 31 4.7
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 31 4.7
AC024761-2|AAF59463.1| 174|Caenorhabditis elegans Hypothetical ... 31 4.7
Z81103-4|CAB03210.1| 686|Caenorhabditis elegans Hypothetical pr... 31 6.2
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 31 6.2
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 31 6.2
AY652943-1|AAT73710.1| 686|Caenorhabditis elegans guanylate cyc... 31 6.2
AL132860-15|CAB60497.1| 619|Caenorhabditis elegans Hypothetical... 31 6.2
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 31 6.2
Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical pr... 31 8.2
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 31 8.2
U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory ... 31 8.2
U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory ... 31 8.2
U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein. 31 8.2
U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein. 31 8.2
AC006617-6|AAF39769.1| 303|Caenorhabditis elegans Hypothetical ... 31 8.2
>AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3a protein.
Length = 923
Score = 330 bits (810), Expect = 6e-90
Identities = 228/737 (30%), Positives = 383/737 (51%), Gaps = 52/737 (7%)
Query: 96 LPIEISKKYEE-RGITEMFDWQLACLCNTKVLFDCANLVYSAPTSAGKTLVAEILTIKTV 154
LP + Y + + + + +DWQ CL + ++L D N + S PT AGKTL+AE+L ++
Sbjct: 151 LPERDMEMYRKIKKLDKFYDWQQECLSDKRLL-DGENCILSLPTGAGKTLIAEVLMLREA 209
Query: 155 LERQKKVIIILPFVSIVREKMFYLQNILSSSGIRVEGFMGSQS---PAGGMQNVHVAICT 211
+ R++ I++LP+V+IV+EK+ L + GI +E + ++ P + V V + T
Sbjct: 210 IVRKRNAILVLPYVAIVQEKISALAPFEDAFGINIEEYASNKGRFPPIKRRKRVSVYVAT 269
Query: 212 IEKANSMINRLLDNGNIEDLGAVVVDELHLLGDQNRGYILELLLTKIKYVTSKSDLLIQV 271
IEKAN +IN L+ G ++ +G VVVDELH++GD RG ILE LL K Y + Q+
Sbjct: 270 IEKANMLINSLITQGQLDRVGMVVVDELHMIGDGGRGAILEQLLAKFLYKGTG-----QI 324
Query: 272 IGMSATLPNLETLATWLNAELFITTFRPIPLEEYCLVENKYYD--KNGKY--ILEAKSSN 327
+GMSATLPN++ L L A ++ T FRP+ L E+ + + +NG + ++N
Sbjct: 325 VGMSATLPNIDDLKFALRAFVYSTNFRPVELTEFVKIGQTMHQVSENGDLNPAGDLPTNN 384
Query: 328 YGVSCNDSVLKICLETIKEGCSVLIFCMTKNRCESLAQLLSSTFCKIGCEGSEFGMILRS 387
+ D + ++ + I + S +IFC K CE++A L++ T + R+
Sbjct: 385 LKSTDPDGICQLLAKLIPKN-SAVIFCPNKKNCENVAVLIAKTL------PAHIRQAKRA 437
Query: 388 QLNSEHILEALEQLKNSPVGLDQILQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVL 447
+ S+ L++ N +D +L++ I GV YHH+GLT DER +E AF G I V+
Sbjct: 438 E--SDAFLQSYLS-DNDDERMDAVLKQCILSGVAYHHSGLTQDERKCVEAAFMEGLIYVV 494
Query: 448 VATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQMSGRAGRMGRDTKGESILICSEAE 507
ATSTL++GVNLP R+VII++P+ ++ + Y QM+GRAGR G DTKG+ I I E
Sbjct: 495 CATSTLAAGVNLPVRRVIIKAPMVGRERLGKAQYLQMAGRAGRAGFDTKGDCITIIKAGE 554
Query: 508 KKIGFNLMM-GDLDPVKSCIETKEKYMRAILEIIASNISCSKQELLLYTDCTLLSAQKEI 566
++ F M+ D+ S + ++E IL+ + ++ + +E++ +L AQ+
Sbjct: 555 EERWFREMLKSDIPRCMSSLSSEESMGSFILDCVVLKLAENIEEIMTAVRYSLFYAQESP 614
Query: 567 LSQNLILEDTLKELENYELIRI----QNNHSENHYVATA------------LGKACLSSS 610
+ ++E ++K LE + I I Q+ SE A++ LG A ++
Sbjct: 615 ENIRKLVESSVKRLEEHYFITIEPLEQDVASEPSAQASSIPRVPGKISPSDLGNAVFNAG 674
Query: 611 MAPNDGLTLFCEL-QKARQCLVLETDLHLIYLVTPYSVSSQWGNIDWLHLLNLWESLTKA 669
P++ L +L Q ++ + HL++++TPY Q NI+W L ++ +L +
Sbjct: 675 FDPDEATRLHADLVSSLNQGVIFASHFHLLFIITPY---EQVCNINWDLFLLMYNALPSS 731
Query: 670 MKKVGELVGVQESFIIKCLRGLNMKHLDSNKLNIHKRFYTALALQDLVNEVHLSEVANKF 729
+K+ G++E FI++ + + +D R Y AL LQ + N + VA +F
Sbjct: 732 ERKLLAECGLEEKFILEAI----ITRVDLTAGTPRMRLYIALMLQKIWNHEPMYTVAERF 787
Query: 730 QCARGFLQGLQQASGTFAGMVTAFCKQLG--WKSMEILISQFQDRLHFGIQXXXXXXXXX 787
+G+LQ Q+S + A + F +++ W + L+ + RL Q
Sbjct: 788 GVEKGWLQATLQSSISQAASIAKFSEKITTMW-PLRKLLPELVQRLSEAAQPELLPLMTV 846
Query: 788 XXXNGMRARTLFDAGFE 804
RA LF AG++
Sbjct: 847 DGIKKARAAILFKAGYK 863
>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical
protein W03A3.2 protein.
Length = 1540
Score = 218 bits (532), Expect = 3e-56
Identities = 140/443 (31%), Positives = 238/443 (53%), Gaps = 21/443 (4%)
Query: 210 CTIEKANSMINRLLDNGNIEDLGAVVVDELHLLGDQNRGYILELLLTKIKYVTSKSDLLI 269
CTIEKA S+ NR L E++G +VVDE+H++ D +RG +E +L+K+ + +
Sbjct: 1 CTIEKAASLTNRALSEDWFEEIGMIVVDEMHMVFDSSRGAHIEHMLSKVLLWNQSALEKV 60
Query: 270 QVIGMSATLPNLETLATWLN-AELFITTFRPIPLEEYCLVENKYYDKNGKYILEAKSSNY 328
++IGMSAT+P L + WL+ A++F FRPI L+ + ++ ++ +L S
Sbjct: 61 RIIGMSATIPELYRIGKWLDGAKVFEARFRPIVLQNHIVIGSELRKSGDNKVLREFSE-- 118
Query: 329 GVSCNDSVLKICLETIKEGCSVLIFCMTKNRCESLAQLLSSTFCKIGCEGSEFGMILRSQ 388
D ++ + E+ + L+ +K E A ++S F +I S IL+ +
Sbjct: 119 -----DPLILLTEESFRRNSQTLVMISSKLDAEKTALNIASRFHEINKTDSSLLEILKER 173
Query: 389 LNSEHILEALEQLKNSPVGLDQILQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLV 448
N +L L+ + D+ + T+++GV YHHAGLT++ER+ IE F+ I +LV
Sbjct: 174 ANG--LLFIKHGLERNGCK-DRNVMSTLAWGVAYHHAGLTMEERECIELGFREKNIVILV 230
Query: 449 ATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQMSGRAGRMGRDTKGESILICSEAEK 508
ATSTL+SGVNLPA +V+I++ + L+Y+QM GRAGR G T+GE+ L+ + ++
Sbjct: 231 ATSTLASGVNLPAERVLIKAQPRGPSALTSLNYRQMVGRAGRTGHATRGETYLLIKKCDR 290
Query: 509 KIGFNLMMGDLDP---VKSCIETKEKYMRAILEIIASNISCSKQELLLYTDCTLLSAQKE 565
++ +D + + R ILE I + ++ ++ + ++ C LL
Sbjct: 291 DAVLKIIETPIDQGVLTRKRDAERTNLSRFILEGICTGLTTTRSQ--IHDLCKLLLFN-- 346
Query: 566 ILSQNLILEDTLKELENYELIRIQNNHSENHYVATALGKACLSSSMAPNDGLTLFCELQK 625
S+NL L D E+ I + +++ T LG+A ++SS+ P L +F +L
Sbjct: 347 --SENLQLSDIAIEMLLRNSF-ISQDENDDQLSPTQLGRAAIASSLPPEASLAIFEDLNS 403
Query: 626 ARQCLVLETDLHLIYLVTPYSVS 648
A + + L+T+LH++YLV Y S
Sbjct: 404 ASRAIALDTELHMLYLVYFYKNS 426
Score = 175 bits (425), Expect = 3e-43
Identities = 131/425 (30%), Positives = 214/425 (50%), Gaps = 51/425 (12%)
Query: 1074 AINVEIKVLKILSNCELHGIVVDKELVSRLLTDVRDSQDVLQKKAFKICGYHFNFNSSKD 1133
++ +E++ + + N GIV D+ L + + +R + L++ +++ FN +SS +
Sbjct: 1149 SLQLEMESCQTVLNIFYSGIVFDQALCNSFIYKIRKQIENLEENIWRLAYGKFNIHSSNE 1208
Query: 1134 VAKVLGIYNG-------------RKTSTRKSVLSSHNT--PISSIVMYWRKLNAILTKIL 1178
VA VL G R T K +L NT PI ++ +R++ LT+ L
Sbjct: 1209 VANVLFYRLGLIYPETSGCKPKLRHLPTNKLILEQMNTQHPIVGKILEYRQIQHTLTQCL 1268
Query: 1179 YPLTEKACIYSEGDRIMSSYSTFTCTGRITMHEPNLQNVPRTFSIPLRYLTFDNTTSDEV 1238
PL + RI + T TGRI PNLQNVP+ S SD +
Sbjct: 1269 MPLAKFI------GRIHCWFEMCTSTGRILTSVPNLQNVPKRIS------------SDGM 1310
Query: 1239 IEFNCRNVFRAAPGSVMVSADYCQLEMRLLTHFSEDSALTRIMKSDVDVFKSIAASWSDV 1298
+ R +F A ++++ ADY QLE+R+L H S DS L ++ SD D+F+ ++ W+
Sbjct: 1311 ---SARQLFIANSENLLIGADYKQLELRVLAHLSNDSNLVNLITSDRDLFEELSIQWN-F 1366
Query: 1299 PEGEVDDDLRQKAKQLCYGIIYGMGNKTLSQHLDVSEMEASLFMDSFERTYPAIRVFTKS 1358
P R KQLCYG+IYGMG K+LS+ +S +A + +F +P +R +
Sbjct: 1367 P--------RDAVKQLCYGLIYGMGAKSLSELTRMSIEDAEKMLKAFFAMFPGVRSYINE 1418
Query: 1359 VIEECKRQGFVETLSGRRRYLPDITSHITSRRNTAERQAVNTMIQGSAADIAKSAMCSIE 1418
E+ ++ + T+ GRR + S I R ER AVN IQGSA++I K+A+ IE
Sbjct: 1419 TKEKVCKEEPISTIIGRRTIIK--ASGIGEERARIERVAVNYTIQGSASEIFKTAIVDIE 1476
Query: 1419 DGINSFNPKPRLILQMHDELIYEVHETNKSRFISLMKSVMEDTVE--LKVPLPVKLKCGY 1476
I F +++L +HDE++ E E + + +++ M++ + L+VP+ V +K G
Sbjct: 1477 SKIKEFG--AQIVLTIHDEVLVECPEIHVAAASESIENCMQNALSHLLRVPMRVSMKTGR 1534
Query: 1477 TWGAL 1481
+W L
Sbjct: 1535 SWADL 1539
Score = 128 bits (308), Expect = 4e-29
Identities = 72/199 (36%), Positives = 106/199 (53%), Gaps = 7/199 (3%)
Query: 642 VTPYSVSSQWGNIDWLHLLNLWESLTKAMKKVGELVGVQESFIIKCLRGLNMKHLDSNKL 701
VTP +VS W DW HL +++ L K++ +LVGV E FI+ L+G L L
Sbjct: 478 VTPINVSV-WQECDWHHLFSIFSKLPSDHKRIAKLVGVSEKFILDQLQGRRNDKL----L 532
Query: 702 NIHKRFYTALALQDLVNEVHLSEVANKFQCARGFLQGLQQASGTFAGMVTAFCKQLGWKS 761
IH RF++ALAL DL++E+ + EV++K++ RG LQ LQ S T+A M+ AFC +LGW
Sbjct: 533 QIHIRFFSALALFDLISEMSIYEVSHKYRIPRGCLQTLQSQSATYAAMIVAFCLRLGWTY 592
Query: 762 MEILISQFQDRLHFGIQXXXXXXXXXXXXNGMRARTLFDAGFEXXXXXXXXXXXXXENVL 821
++ L+ F RL FG++ +G RAR L + G + L
Sbjct: 593 LKALLDGFATRLLFGVRSELSELVAIEGIDGQRARILHERGVTCLSHLSACDSSKLAHFL 652
Query: 822 LKSVPFESAKERENDEKGD 840
+VP+ S+ ND G+
Sbjct: 653 TLAVPYSSS--NSNDGLGE 669
>AC024819-4|AAU20828.1| 469|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3b protein.
Length = 469
Score = 175 bits (427), Expect = 1e-43
Identities = 124/417 (29%), Positives = 210/417 (50%), Gaps = 28/417 (6%)
Query: 408 LDQILQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIR 467
+D +L++ I GV YHH+GLT DER +E AF G I V+ ATSTL++GVNLP R+VII+
Sbjct: 1 MDAVLKQCILSGVAYHHSGLTQDERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIK 60
Query: 468 SPVFQKQPINILSYKQMSGRAGRMGRDTKGESILICSEAEKKIGFNLMM-GDLDPVKSCI 526
+P+ ++ + Y QM+GRAGR G DTKG+ I I E++ F M+ D+ S +
Sbjct: 61 APMVGRERLGKAQYLQMAGRAGRAGFDTKGDCITIIKAGEEERWFREMLKSDIPRCMSSL 120
Query: 527 ETKEKYMRAILEIIASNISCSKQELLLYTDCTLLSAQKEILSQNLILEDTLKELENYELI 586
++E IL+ + ++ + +E++ +L AQ+ + ++E ++K LE + I
Sbjct: 121 SSEESMGSFILDCVVLKLAENIEEIMTAVRYSLFYAQESPENIRKLVESSVKRLEEHYFI 180
Query: 587 RI----QNNHSENHYVATA------------LGKACLSSSMAPNDGLTLFCEL-QKARQC 629
I Q+ SE A++ LG A ++ P++ L +L Q
Sbjct: 181 TIEPLEQDVASEPSAQASSIPRVPGKISPSDLGNAVFNAGFDPDEATRLHADLVSSLNQG 240
Query: 630 LVLETDLHLIYLVTPYSVSSQWGNIDWLHLLNLWESLTKAMKKVGELVGVQESFIIKCLR 689
++ + HL++++TPY Q NI+W L ++ +L + +K+ G++E FI++ +
Sbjct: 241 VIFASHFHLLFIITPY---EQVCNINWDLFLLMYNALPSSERKLLAECGLEEKFILEAI- 296
Query: 690 GLNMKHLDSNKLNIHKRFYTALALQDLVNEVHLSEVANKFQCARGFLQGLQQASGTFAGM 749
+ +D R Y AL LQ + N + VA +F +G+LQ Q+S + A
Sbjct: 297 ---ITRVDLTAGTPRMRLYIALMLQKIWNHEPMYTVAERFGVEKGWLQATLQSSISQAAS 353
Query: 750 VTAFCKQLG--WKSMEILISQFQDRLHFGIQXXXXXXXXXXXXNGMRARTLFDAGFE 804
+ F +++ W + L+ + RL Q RA LF AG++
Sbjct: 354 IAKFSEKITTMW-PLRKLLPELVQRLSEAAQPELLPLMTVDGIKKARAAILFKAGYK 409
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 130 bits (314), Expect = 7e-30
Identities = 116/420 (27%), Positives = 197/420 (46%), Gaps = 46/420 (10%)
Query: 131 NLVYSAPTSAGKTLVAEILTIKTVLERQK----------KVIIILPFVSIVREKMFYLQN 180
NL+ APT AGKT +A + + T+ E Q K+I I P ++ E
Sbjct: 110 NLLICAPTGAGKTNIAMLTILNTIHEHQNSRGDIMKDDFKIIYIAPMKALATEMTESFGK 169
Query: 181 ILSSSGIRVEGFMG-SQSPAGGMQNVHVAICTIEKANSMINRLL-DNGNIEDLGAVVVDE 238
L+ G++V+ G +Q + + + + T EK + + + DN I + +++DE
Sbjct: 170 RLAPLGLKVKELTGDTQLSRNEVADTQMLVLTPEKWDVITRKSTSDNSLINVVRLLIIDE 229
Query: 239 LHLLGDQNRGYILELLLTKIKYVTSKSDLLIQVIGMSATLPNLETLATWLNAE------L 292
+HLL D+ RG ++E L+ + S I+++G+SATLPN +A +L
Sbjct: 230 VHLLHDE-RGPVIETLVARTLRQVEMSQSGIRIVGLSATLPNFIDVARFLRVNPYKGLFF 288
Query: 293 FITTFRPIPLEEYCLVENKYYDKNGKYILEAKSSNYGVSCNDSVLKICLETIKEGCSVLI 352
F FRP+PL + + K + L N C D V+ + +K G VL+
Sbjct: 289 FDGRFRPVPLTQKFIGTRKAGNFRDNLTL---MDNV---CYDEVV----DFVKRGHQVLV 338
Query: 353 FCMTKNRCESLAQLLSSTFCKIGCEGSEFGMILRSQLNSEHILEALEQLK--NSPVGLDQ 410
F T+N L + FC + + L S ++A + + + +
Sbjct: 339 FVHTRNGTAKLGE----AFCARASVLGQMDLFLPKDRASSKYIQADKAINICRNRAQISP 394
Query: 411 ILQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIR-SP 469
+ Q+ G+G HHAGL +R ++E F G + VL T+TL+ GVNLPA V+I+ +
Sbjct: 395 LFQR----GMGIHHAGLCRQDRILMERCFAEGHVSVLFCTATLAWGVNLPAHAVVIKGTD 450
Query: 470 VFQKQ-----PINILSYKQMSGRAGRMGRDTKGESILICSEAEKKIGFNLMMGDLDPVKS 524
VF + + +L +Q+ GRAGR + +G I+I + +K + M+ +P++S
Sbjct: 451 VFDAEKGVFTDLGVLDVQQIFGRAGRPQFENEGHGIIITTR-DKIDKYLTMLVHQNPIES 509
Score = 75.4 bits (177), Expect = 3e-13
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 409 DQILQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRS 468
D+ L+ T+ FG+G HHAGL+ ER I+E F I+VL+AT+TL+ G+N PA VI++
Sbjct: 1242 DENLKLTLPFGIGMHHAGLSAHERAIVEQLFIEKKIQVLIATATLAWGINCPAHLVIVKG 1301
Query: 469 PVF------QKQPINILSYKQMSGRAGRMGRDTKGESILICSEAEKKIGFNLMMGDLDPV 522
+ + + QM GRAGR D +++ +A+K +
Sbjct: 1302 TEYFDGKKGKYVDFPVTDVLQMMGRAGRPQFDDSAVAVIYVQDAKKTFYKKFLYEPFPVE 1361
Query: 523 KSCIETKEKYMRAILEIIASNISCSKQELLLYTDCTLL 560
S + ++ A EI A I SKQ ++ Y T L
Sbjct: 1362 SSLLPVLPNHVNA--EISAGTID-SKQAIVEYLSKTYL 1396
Score = 74.5 bits (175), Expect = 5e-13
Identities = 52/178 (29%), Positives = 92/178 (51%), Gaps = 12/178 (6%)
Query: 136 APTSAGKTLVAEILTIKTVLERQ-KKVIIILPFVSIVREKMF-YLQNILSSSGIRVEGFM 193
APT +GKTL AE+ + + + KV+ I P S+VRE++ + + G RV
Sbjct: 983 APTGSGKTLCAELAMFRLLQDHPGMKVVYIAPLKSLVRERVDDWKKKFEDGMGYRVVEVS 1042
Query: 194 GSQSP-AGGMQNVHVAICTIEKANSMINRLLDNGNIEDLGAVVVDELHLLGDQNRGYILE 252
G +P + + I T EK + + + +G +V+DE+HLLG +RG +LE
Sbjct: 1043 GDVTPDPEELAASSILITTPEKWDGISRSWATREYVRRVGLIVLDEVHLLG-VDRGAVLE 1101
Query: 253 LLLTKIKYVTSKSDLL---IQVIGMSATLPNLETLATWLN-----AELFITTFRPIPL 302
+++++K +T +S + ++++G+S L N +A WL F + RP+P+
Sbjct: 1102 AIVSRLKMITRRSHVTEEPVRLLGLSTALANAGDVAEWLGIPDEACYNFRPSVRPVPI 1159
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 128 bits (310), Expect = 2e-29
Identities = 123/428 (28%), Positives = 205/428 (47%), Gaps = 48/428 (11%)
Query: 120 LCNTKVLFDCANLVYSAPTSAGKTLVAEILTIKTVLER----------QKKVIIILPFVS 169
LC++ L +L+ APT AGKT VA + ++ + + K++ I P S
Sbjct: 482 LCDS-ALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNHLAEDGSVKLDEFKIVYIAPMKS 540
Query: 170 IVREKMFYLQNILSSSGIRVEGFMG-SQSPAGGMQNVHVAICTIEKANSMINRLLDNGNI 228
+V+E + L+ GI V G +Q V +CT EK + + + +
Sbjct: 541 LVQEMVGSFSKRLAPFGITVGEMTGDAQMSKEQFMATQVIVCTPEKYDVVTRKGGERAYN 600
Query: 229 EDLGAVVVDELHLLGDQNRGYILELLLTKIKYVTSKSDLLIQVIGMSATLPNLETLATWL 288
+ + +++DE+HLL D +RG +LE ++ + ++ +++G+SATLPN + +AT+L
Sbjct: 601 QMVRLLIIDEIHLLHD-DRGPVLESIVVRTIRQMEQNHDECRLVGLSATLPNYQDVATFL 659
Query: 289 NAE-----LFITTFRPIPLEEYCLVENKYYDKNGKYILEAKSSNYGVSCNDSVLKICLET 343
+ F ++RP+PLE+ +Y + E K+ + N+ V +E
Sbjct: 660 RVKPEHLHFFDNSYRPVPLEQ------QYIG-----VTEKKALKRFQAMNEVVYDKIMEH 708
Query: 344 IKEGCSVLIFCMTKNRCESLAQLLSSTFCKIGCEGSEFGMILRSQLNSEHILEA-LEQLK 402
+ VL+F ++ A+ + C E +R S IL EQ K
Sbjct: 709 AGKS-QVLVFVHSRKETAKTAKAIRDA-C---LEKDTLSAFMREGSASTEILRTEAEQAK 763
Query: 403 NSPVGLDQILQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPAR 462
N LD L+ + +G HHAG+ +R ++E F I+VL +T+TL+ GVNLPA
Sbjct: 764 N----LD--LKDLLPYGFAIHHAGMNRVDRTLVEDLFADRHIQVLFSTATLAWGVNLPAH 817
Query: 463 KVIIR-SPVFQKQ-----PINILSYKQMSGRAGRMGRDTKGESILICSEAEKKIGFNLMM 516
VII+ + ++ + + L QM GRAGR D +GE ILI + +E + +LM
Sbjct: 818 TVIIKGTQIYNPEKGRWTELGALDIMQMLGRAGRPQYDDRGEGILITNHSELQYYLSLMN 877
Query: 517 GDLDPVKS 524
L PV+S
Sbjct: 878 QQL-PVES 884
Score = 87.4 bits (207), Expect = 7e-17
Identities = 96/446 (21%), Positives = 196/446 (43%), Gaps = 41/446 (9%)
Query: 131 NLVYSAPTSAGKTLVAEILTIKTVLER-QKKVIIILPFVSIVREKMF-YLQNILSSSGIR 188
N++ AP +GKT +AE+ ++ + K + I P + + + + + + G
Sbjct: 1339 NVIVCAPNGSGKTAIAELAVLRHFENTPEAKAVYITPMEDMATKVYADWKRRLEPAIGHT 1398
Query: 189 VEGFMGSQSPAGGM-QNVHVAICTIEKANSMINRLLDNGNIEDLGAVVVDELHLLGDQNR 247
+ G Q+ + Q + I T E+ +++ R +++++ + D+LH++G N
Sbjct: 1399 IVLLTGEQTMDLKLAQRGQLIISTPERWDNISRRWKQRKSVQNVKLFIADDLHMIGASN- 1457
Query: 248 GYILELLLTKIKYVTSKSDLLIQVIGMSATLPNLETLATWLNAEL-----FITTFRPIPL 302
G + E++ ++ +Y++S+ + ++V+ +S++L N L WL F+ + RP+PL
Sbjct: 1458 GAVFEVVCSRTRYISSQLESAVRVVALSSSLTNARDLGMWLGCSASATFNFMPSTRPVPL 1517
Query: 303 EEYCLVENKYYDKNGKYILEAKSSNYGVSCNDSVLKICLETIK-EGCSVLIFCMTKNRCE 361
+ +E K ++ L +S + IC K E L+F + +
Sbjct: 1518 D----LEIKSFN------LSHNASRFAAMERPVYQAICRHAGKLEPKPALVFVPVRRQTR 1567
Query: 362 SLAQLLSSTFCKIGCEGSEFGMILRSQLNSEHILEALEQLKNSPVGLDQILQKTISFGVG 421
+A L + G F + + +L +E D+ L++++S GVG
Sbjct: 1568 PVAVALLTMALADGAP-KRFLRLAEHDDTFQALLADIE---------DESLRESVSCGVG 1617
Query: 422 YHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQK------QP 475
+ H G + I++ F+S AI+V V + + + A V++ F +
Sbjct: 1618 FLHEGTAPKDVHIVQQLFESNAIQVCVVPRGMCYQIEMSAYLVVVMDTQFYNGKYHVYED 1677
Query: 476 INILSYKQMSGRAGRMGRDTKGESILICSEAEKKIGFNLMMGDLDPVKSCIE-TKEKYMR 534
I M G A R D+ + +++C + K+ + + D PV+S ++ +
Sbjct: 1678 YPIADMLHMVGLANRPILDSDAKCVVMC-QTSKRAYYKKFLCDPLPVESHLDHCLHDHFN 1736
Query: 535 AILEIIASNISCSKQELLLYTDCTLL 560
A EI+ I +KQ+ + Y TLL
Sbjct: 1737 A--EIVTKTIE-NKQDAIDYLTWTLL 1759
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 105 bits (252), Expect = 2e-22
Identities = 125/434 (28%), Positives = 195/434 (44%), Gaps = 67/434 (15%)
Query: 131 NLVYSAPTSAGKTLVAEILTIKTVLERQKKVIIILPFVSIVREKMFYLQNILSSSGIRVE 190
+++ SA TSAGKT+VA K + E+Q+ VI P ++ +K L+ G+ +
Sbjct: 142 SVLVSAHTSAGKTVVATYAIAKCLREKQR-VIYTSPIKALSNQKYRELEEEFKDVGL-MT 199
Query: 191 GFMGSQSPAGGMQNVHVAICTIEKANSMINRLLDNGNIEDLGAVVVDELHLLGDQNRGYI 250
G + A + + T E SM+ R + ++++G VV DE+H + D+ RG +
Sbjct: 200 GDVTLNPDASCL------VMTTEILRSMLYR--GSEIMKEVGWVVYDEIHYMRDKERGVV 251
Query: 251 LELLLTKIKYVTSKSDLLIQVIGMSATLPNLETLATWLNA------ELFITTFRPIPLEE 304
E + + SK+ I+ +SAT+PN A W+ + + T +RP PL+
Sbjct: 252 WEETII----LMSKN---IKQAFLSATIPNARQFAQWVASIKQQPVNVVYTDYRPTPLQH 304
Query: 305 ----------YCLV-------ENKYYDKNGKYILEAKSSNY--------GVSCNDSVLKI 339
Y +V E+K+ D S+ G + +VLKI
Sbjct: 305 WIYPVGGEGMYEVVNVKGEFREDKFRDAMSGLATAGDSAGSFNKRRTGGGTQGDSNVLKI 364
Query: 340 CLETIK-EGCSVLIFCMTKNRCESLA-QLLSSTFCKIGCEGSEFGMILRSQLNSEHILEA 397
+G + ++F ++ CES A L F K E GM+ +S S A
Sbjct: 365 IRSVASNDGLNCIVFSFSRKECESYAISLKDMDFNK----DHEKGMV-KSVYES-----A 414
Query: 398 LEQLKNSPVGLDQILQ--KTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSS 455
+ QL L QIL + G+G HH+GL ++ IE F G ++VL AT T S
Sbjct: 415 IAQLSPEDQKLPQILNILPLLRRGIGVHHSGLMPILKETIEILFGEGLVKVLFATETFSM 474
Query: 456 GVNLPARKVIIRS----PVFQKQPINILSYKQMSGRAGRMGRDTKGESILICSEA-EKKI 510
G+N+PAR V+ S + I Y QM+GRAGR G+D +G IL+ A
Sbjct: 475 GLNMPARTVVFTSARKFDGSDNRYITSGEYIQMAGRAGRRGKDDRGTVILMVDSAMSADD 534
Query: 511 GFNLMMGDLDPVKS 524
++ G DP+ S
Sbjct: 535 AKQIIKGATDPLNS 548
>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
protein C28H8.3 protein.
Length = 1714
Score = 85.8 bits (203), Expect = 2e-16
Identities = 46/99 (46%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 410 QILQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSP 469
Q+L K G+GYHHAGL ER +E F+SG + VL +TSTLS GVN+P + V+
Sbjct: 1272 QVLLKLFERGIGYHHAGLNTVERGAVEVLFRSGNLAVLFSTSTLSLGVNMPCKTVMFGVD 1331
Query: 470 VFQKQPINILSYKQMSGRAGRMGRDTKGESILICSEAEK 508
Q P L Y+QMSGRAGR G D G I + K
Sbjct: 1332 TLQLTP---LLYRQMSGRAGRRGFDHSGNVIFMSIPTSK 1367
Score = 37.1 bits (82), Expect = 0.094
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 136 APTSAGKTLVAEILTIKTVLERQKKVII-ILPFVSIVRE--KMFY--LQNILSSSGIRVE 190
APTSAGKT V+ K + V++ + P +++ + Y +N GI +
Sbjct: 806 APTSAGKTFVSYYCIEKVLRSSDNDVVVYVAPSKALINQVCGSVYARFRNKSMKRGISLF 865
Query: 191 GFMGSQSPAGGMQNVHVAICTIEKANS-MINRL-LDNGNIEDLGAVVVDELHLLGDQNRG 248
G + + MQ V I E M++R + + VV DE+H +G
Sbjct: 866 GTLTQEYSQNAMQ-CQVLITVPECLQELMLSRTPAVQKFVSHIKYVVFDEVHSIGASEES 924
Query: 249 YILELLLTKIKYVTSKSDLLIQVIGMSATLPNLETLATWLNA 290
+I E LL I+ + +SAT+ N L WLN+
Sbjct: 925 HIWEQLLLLIQ---------CPFLALSATIGNANKLHEWLNS 957
>Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical
protein F01G4.3 protein.
Length = 1266
Score = 79.0 bits (186), Expect = 2e-14
Identities = 50/167 (29%), Positives = 91/167 (54%), Gaps = 23/167 (13%)
Query: 350 VLIFCMTKNRCESLAQLLSSTFCKIGCEGSEFGMILRSQLNSEHIL----EALEQLKNSP 405
+++F ++ RC+ AQ+L+S M L +++ +H+ + +++LK S
Sbjct: 565 MVVFVFSRKRCDENAQMLAS-------------MNLTTEVEKQHVRLFFSQCVQRLKGSD 611
Query: 406 VGLDQIL--QKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARK 463
L Q+L + G HH+G+ ++++E F+ G +++L AT T + GVN+PAR
Sbjct: 612 KELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAMGVNMPARC 671
Query: 464 VIIRSPV----FQKQPINILSYKQMSGRAGRMGRDTKGESILICSEA 506
V+ S + +++ +N Y QM+GRAGR G D G I+IC ++
Sbjct: 672 VVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDS 718
Score = 54.4 bits (125), Expect = 6e-07
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 27/183 (14%)
Query: 131 NLVYSAPTSAGKTLVAEILTIKTVLERQKKVIIILPFVSIVREKMFYLQNILSSSGIRVE 190
+L +A TSAGKT+VAE I + + + P ++ +K + I G+
Sbjct: 309 SLFVAAHTSAGKTVVAEY-AIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGL--- 364
Query: 191 GFMGSQSPAGGMQNVHVAICTIEKANSMINRLLDNGN--IEDLGAVVVDELHLLGDQNRG 248
G +Q A C I ++ +L NG+ I DL VV DE+H + ++ RG
Sbjct: 365 -------VTGDIQLHPEAACLI-MTTEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERG 416
Query: 249 YILELLLTKIKYVTSKSDLLIQVIGMSATLPNLETLATWL----NAELFI--TTFRPIPL 302
++ E +L + ++++ +SAT+PN A W+ N ++ + T RP+PL
Sbjct: 417 HVWEEVLIML-------PAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDRRPVPL 469
Query: 303 EEY 305
E +
Sbjct: 470 EHF 472
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 47.6 bits (108), Expect = 7e-05
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 422 YHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSY 481
++HAGLT ++R+ F I +VAT G++ P +R+ + P NI SY
Sbjct: 475 HYHAGLTKNQREKAHTDFMRDKITTIVATVAFGMGIDKPD----VRNVIHYGCPNNIESY 530
Query: 482 KQMSGRAGRMGRDTKGESILICSEAEKKIG-FNLMMGDLDPVKSCIETKEKYMRAILEII 540
Q GRAGR G SI A K + + + + +E +R LE++
Sbjct: 531 YQEIGRAGRDG----SPSICRVFWAPKDLNTIKFKLRNSQQKEEVVENLTMMLRQ-LELV 585
Query: 541 ASNISCSKQELLLYTD 556
+ + C + +LL + D
Sbjct: 586 LTTVGCRRYQLLKHFD 601
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 46.0 bits (104), Expect = 2e-04
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 120 LCNTKVLFDCANLVYSAPTSAGKTLVAEILTIK----------TVLERQKKVIIILPFVS 169
LC++ L +L+ APT AGKT V + ++ +V + K++ I P S
Sbjct: 284 LCDS-ALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNHLAEDGSVKLEEFKIVYIAPTKS 342
Query: 170 IVREKMFYLQNILSSSGIRVEGFMGSQSPAGGMQNVHVAICTIEKANSMINRLLDNGNIE 229
+V+E + L+ GI V G M Q V +CT EK + + + + +
Sbjct: 343 LVQEMVGSFSKRLAPFGITV-GEMTGQMNKEQFMATQVIVCTPEKYDVVTRKGGERAYNQ 401
Query: 230 DLGAVVVDELHLLGDQNRGYILELLL 255
+ +++DE+HLL D +RG +LE ++
Sbjct: 402 MVRLLIIDEIHLLHD-DRGPVLESIV 426
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 45.2 bits (102), Expect = 4e-04
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 131 NLVYSAPTSAGKTLVAEILTIKTVLER-----QKKVIIILPFVSIV-REKMFYLQNILSS 184
N V APT +GKT VA +K + ER +V++++P + +V ++K +L+ +
Sbjct: 387 NCVIVAPTGSGKTEVAIYAALKHIEERTSQGKPSRVVLLVPKIPLVGQQKDRFLK--YCN 444
Query: 185 SGIRVEGFMGSQSPAGGMQN------VHVAICTIEKANSMINRLLDNGN--IEDLGAVVV 236
V GF GS+S G HV++ T + +M+ + N + D ++
Sbjct: 445 GMYEVNGFHGSESSVSGTGRRDEVIATHVSVMTPQILINMLQSVRQNERLYVSDFSMMIF 504
Query: 237 DELHLLGDQNRGYILELLLTKIKYVTSKSDLLIQVIGMSATL 278
DE+H + ++ ++ + KY Q+IG++A+L
Sbjct: 505 DEVHKAAKNHPYVLINQMVQEWKYEKP------QIIGLTASL 540
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 45.2 bits (102), Expect = 4e-04
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 418 FGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPIN 477
F V H + ERD I F+SG+ RVL+ T L+ G+++ ++I + P N
Sbjct: 293 FTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDL----PSN 348
Query: 478 ILSYKQMSGRAGRMGRDTKGESILICSEAEKK 509
+Y GR+GR GR KG +I +E + +
Sbjct: 349 RENYIHRIGRSGRFGR--KGVAINFVTENDAR 378
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 45.2 bits (102), Expect = 4e-04
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 418 FGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPIN 477
F V H + ERD I F+SG+ RVL+ T L+ G+++ ++I + P N
Sbjct: 6 FTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDL----PSN 61
Query: 478 ILSYKQMSGRAGRMGRDTKGESILICSEAEKK 509
+Y GR+GR GR KG +I +E + +
Sbjct: 62 RENYIHRIGRSGRFGR--KGVAINFVTENDAR 91
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 45.2 bits (102), Expect = 4e-04
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 418 FGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPIN 477
F V H + ERD I F+SG+ RVL+ T L+ G+++ ++I + P N
Sbjct: 293 FTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDL----PSN 348
Query: 478 ILSYKQMSGRAGRMGRDTKGESILICSEAEKK 509
+Y GR+GR GR KG +I +E + +
Sbjct: 349 RENYIHRIGRSGRFGR--KGVAINFVTENDAR 378
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 42.7 bits (96), Expect = 0.002
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 414 KTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQK 473
K +F V H + +RD + F++G RVL++T + G+++P ++I +
Sbjct: 286 KEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDL--- 342
Query: 474 QPINILSYKQMSGRAGRMGRDTKGESILICSEAEKKI 510
P N Y GR+GR GR KG +I + + +I
Sbjct: 343 -PNNRELYIHRIGRSGRFGR--KGVAINFVKQDDVRI 376
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 42.7 bits (96), Expect = 0.002
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 414 KTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQK 473
K +F V H + +RD + F++G RVL++T + G+++P ++I +
Sbjct: 286 KEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDL--- 342
Query: 474 QPINILSYKQMSGRAGRMGRDTKGESILICSEAEKKI 510
P N Y GR+GR GR KG +I + + +I
Sbjct: 343 -PNNRELYIHRIGRSGRFGR--KGVAINFVKQDDVRI 376
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 41.9 bits (94), Expect = 0.003
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 15/185 (8%)
Query: 328 YGVSCNDSVLKICLETIKEGCSVLIFCMTKNRCESLAQLLSSTFCKIGCEGSEFGMILRS 387
+ + + V K C E I E + + C+ + + + T+C G E + + +R+
Sbjct: 313 FSATFSHEVEKWCKENIDE---IGMVCVGERNSSNTSVKQKLTYC--GTEDGK-KIAIRN 366
Query: 388 QLNSEHILEALE--QLKNSPVGLDQILQKTIS-FGVGYHHAGLTLDERDIIEGAFKSGAI 444
L + AL Q K+ V L ++L S V ++G + ERD F+ G I
Sbjct: 367 LLRTSFKPPALVFVQSKDRAVQLVKLLSAIDSNLKVDSINSGKSDKERDETMERFRRGEI 426
Query: 445 RVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQMSGRAGRMGRDTKGESILICS 504
VLV T L G++L ++I + P +I+SY GR GR G+ G ++ +
Sbjct: 427 WVLVCTELLGRGLDLSDVGLVINYDL----PTSIVSYIHRVGRTGRAGK--SGHAVTYFT 480
Query: 505 EAEKK 509
+A+ K
Sbjct: 481 DADMK 485
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 41.9 bits (94), Expect = 0.003
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 408 LDQILQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIR 467
+DQ+++ + V H G+ +RD FK+G I+VLVATS + G+++ +++
Sbjct: 568 VDQLMRTGYN-SVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVN 626
Query: 468 SPVFQKQPINILSYKQMSGRAGRMGRDTKGESILICSEAEKKIG 511
P + Y GR GR GR + ++ EK G
Sbjct: 627 YDC----PNHYEDYVHRVGRTGRAGRKGYAYTFVLPEHQEKMAG 666
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 41.9 bits (94), Expect = 0.003
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 410 QILQKTISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSP 469
QIL + VG + LT +R FK I VLV+T S G+++ + +I
Sbjct: 434 QILLGLLGIKVGQMQSSLTQGQRIESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVIN-- 491
Query: 470 VFQKQPINILSYKQMSGRAGRMGRDTKGESILICSEAEKKIGFNLMMGDLD-PVKSCI-- 526
P +I Y GR R G+ G SI + E E+K+ ++ + D +K +
Sbjct: 492 --MNMPKSIKQYIHRVGRTARAGK--AGRSISLVGEDERKLLKEIVNSNADRTLKQRLVA 547
Query: 527 -ETKEKYMRAILEI 539
E E Y R I E+
Sbjct: 548 PEVVEAYRRRIDEL 561
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 41.5 bits (93), Expect = 0.004
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H G + +R++ +SG +++LVAT S G+++P ++ P++I Y
Sbjct: 369 HGGRSQSDREMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDF----PMDIEEYVH 424
Query: 484 MSGRAGRMGRDTKGESI 500
GR GR GR KGE++
Sbjct: 425 RVGRTGRAGR--KGEAM 439
>Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical
protein C08F8.2b protein.
Length = 719
Score = 38.7 bits (86), Expect = 0.031
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 446 VLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQMSGRAGRMG 492
VLVAT + G+NL R+VI S Q + + + Q++GRAGR G
Sbjct: 407 VLVATDAIGMGLNLNIRRVIFNSCTRQTELLPTYAALQIAGRAGRFG 453
>Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical
protein C08F8.2a protein.
Length = 721
Score = 38.7 bits (86), Expect = 0.031
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 446 VLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQMSGRAGRMG 492
VLVAT + G+NL R+VI S Q + + + Q++GRAGR G
Sbjct: 409 VLVATDAIGMGLNLNIRRVIFNSCTRQTELLPTYAALQIAGRAGRFG 455
>Z38112-7|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 38.3 bits (85), Expect = 0.041
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 423 HHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYK 482
+HAGL +R+ ++ + + I V+ AT G++ P + +I Q N+ Y
Sbjct: 444 YHAGLGKKDRNEVQEKWMNNEIPVVAATVAFGMGIDKPDVRAVIHWSPSQ----NLAGYY 499
Query: 483 QMSGRAGRMGR 493
Q +GRAGR G+
Sbjct: 500 QEAGRAGRDGK 510
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 38.3 bits (85), Expect = 0.041
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 422 YHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSY 481
++HA + +R + SG I+V+VAT G++ P +R + P +I +Y
Sbjct: 338 HYHAYMEPVDRSGAHQGWISGKIQVIVATVAFGMGIDKPN----VRFVIHHSLPKSIENY 393
Query: 482 KQMSGRAGRMGR 493
Q SGRAGR G+
Sbjct: 394 YQESGRAGRDGQ 405
Score = 30.7 bits (66), Expect = 8.2
Identities = 42/221 (19%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 162 IIILPFVSIVREKMFYLQNI-LSSSGI----------RVEGFMGSQSPAGGMQNVHVAIC 210
+++ P +S+V +++ L+++ + SS + RVE + ++ + ++V
Sbjct: 130 LVVSPLISLVEDQILQLRSLGIDSSSLNANTSKEEAKRVEDAITNKDSK--FRLLYVTPE 187
Query: 211 TIEKANSMINRLLDNGNIEDLGAVVVDELHLLGDQNRGYILELLLTKIKYVTSKSDLLIQ 270
+ K+ M+N+L + ++ L + +DE+H + + + K +
Sbjct: 188 KLAKSKKMMNKLEKSLSVGFLKLIAIDEVHCCSQWGHDFRTDYSFLNVLKRQFKG---VP 244
Query: 271 VIGMSATLPN--LETLATWLNAELFITTFRPIPLEEYCLVENKYYDKNGKYILEAKSSNY 328
++G++AT + L+ + L + +T FR + N KY + K +
Sbjct: 245 ILGLTATATSNVLDDVKDMLGIQAALT-FRA-----------GFNRSNLKYKVVQKPGSE 292
Query: 329 GVSCNDSVLKICLETIKEGCSVLIFCMTKNRCESLAQLLSS 369
C + + K G + +I+C+++N CE +A+ L S
Sbjct: 293 D-ECTEEIAKTIKRDFA-GQTGIIYCLSRNDCEKVAKALKS 331
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 38.3 bits (85), Expect = 0.041
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 422 YHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSY 481
++HA + +R + SG I+V+VAT G++ P +R + P +I +Y
Sbjct: 361 HYHAYMEPVDRSGAHQGWISGKIQVIVATVAFGMGIDKPN----VRFVIHHSLPKSIENY 416
Query: 482 KQMSGRAGRMGR 493
Q SGRAGR G+
Sbjct: 417 YQESGRAGRDGQ 428
Score = 30.7 bits (66), Expect = 8.2
Identities = 42/221 (19%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 162 IIILPFVSIVREKMFYLQNI-LSSSGI----------RVEGFMGSQSPAGGMQNVHVAIC 210
+++ P +S+V +++ L+++ + SS + RVE + ++ + ++V
Sbjct: 153 LVVSPLISLVEDQILQLRSLGIDSSSLNANTSKEEAKRVEDAITNKDSK--FRLLYVTPE 210
Query: 211 TIEKANSMINRLLDNGNIEDLGAVVVDELHLLGDQNRGYILELLLTKIKYVTSKSDLLIQ 270
+ K+ M+N+L + ++ L + +DE+H + + + K +
Sbjct: 211 KLAKSKKMMNKLEKSLSVGFLKLIAIDEVHCCSQWGHDFRTDYSFLNVLKRQFKG---VP 267
Query: 271 VIGMSATLPN--LETLATWLNAELFITTFRPIPLEEYCLVENKYYDKNGKYILEAKSSNY 328
++G++AT + L+ + L + +T FR + N KY + K +
Sbjct: 268 ILGLTATATSNVLDDVKDMLGIQAALT-FRA-----------GFNRSNLKYKVVQKPGSE 315
Query: 329 GVSCNDSVLKICLETIKEGCSVLIFCMTKNRCESLAQLLSS 369
C + + K G + +I+C+++N CE +A+ L S
Sbjct: 316 D-ECTEEIAKTIKRDFA-GQTGIIYCLSRNDCEKVAKALKS 354
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 37.5 bits (83), Expect = 0.071
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H G D+R+ A K G +LVAT G+++ +++ + + +I Y
Sbjct: 604 HGGKGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAK----SIEDYTH 659
Query: 484 MSGRAGRMGRDTKGESILICSEAEKKIGFNLMMGDLD-PVKSC 525
GR GR G+ G++I + + + F+L ++ PV SC
Sbjct: 660 RIGRTGRAGK--HGKAITFLTPDDTAVYFDLKQVLVESPVSSC 700
Score = 30.7 bits (66), Expect = 8.2
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 38 VKEYLEKSENKQKHVNR-RFVNTASNNSLLNKTAEGKLTASKEVRNTQKIQSKKLKDWGL 96
++E LEK + ++ + + +F++ A +L K E ++ ++R TQK + K+WG
Sbjct: 8 LEELLEKKKREEDELAKPKFLSKAERAALALKRREEEVA---KLRETQKQAEEARKNWGR 64
Query: 97 PIEISKKYEERGI 109
+ S +RG+
Sbjct: 65 TEKTSDDRRDRGL 77
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 37.5 bits (83), Expect = 0.071
Identities = 26/119 (21%), Positives = 57/119 (47%)
Query: 972 EEDQADKTNEVKNSIKDKPLQLFKSPIKRCCETDSIQTVIKKIKVDMKKYSGMDLAQLTI 1031
E ++ +++ + +KP ++ + P K + Q + K K K+ ++ Q +
Sbjct: 930 EIEEIEESPKKSEKAPEKPQEIQEIPKKSEKAPEKPQEIEKSPKKSEKRQEIQEIPQKSE 989
Query: 1032 KVNNRQTKLKNLTLAQESCVKAWAIEMISEKQQNALYESYQNAINVEIKVLKILSNCEL 1090
K + ++ +++ L +S A E+IS++ A YES NA+ E + + +N +L
Sbjct: 990 KTSEKRPEIEELPTFFKSSAPAQTPEIISDEDIFAQYESLLNAVFSEFQFVDDRTNYQL 1048
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 37.5 bits (83), Expect = 0.071
Identities = 26/119 (21%), Positives = 57/119 (47%)
Query: 972 EEDQADKTNEVKNSIKDKPLQLFKSPIKRCCETDSIQTVIKKIKVDMKKYSGMDLAQLTI 1031
E ++ +++ + +KP ++ + P K + Q + K K K+ ++ Q +
Sbjct: 928 EIEEIEESPKKSEKAPEKPQEIQEIPKKSEKAPEKPQEIEKSPKKSEKRQEIQEIPQKSE 987
Query: 1032 KVNNRQTKLKNLTLAQESCVKAWAIEMISEKQQNALYESYQNAINVEIKVLKILSNCEL 1090
K + ++ +++ L +S A E+IS++ A YES NA+ E + + +N +L
Sbjct: 988 KTSEKRPEIEELPTFFKSSAPAQTPEIISDEDIFAQYESLLNAVFSEFQFVDDRTNYQL 1046
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 35.5 bits (78), Expect = 0.29
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 31/231 (13%)
Query: 72 GKLTASKEVRNTQKIQSKKLKDWGLPIEISKKYEERGITEMFDWQLACLCNTKVLFDCAN 131
GK SK+ + + S + + LP E+ + E+ G +E + Q A L + D +
Sbjct: 138 GKPKKSKKEASKKTDISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVL--PAAVRDRQD 195
Query: 132 LVYSAPTSAGKTLVAEILTIKTVLE-------------RQKKVIIILPFVSIVREKMFYL 178
++ +A T +GKTL I + +LE R + +I+ P +V + M ++
Sbjct: 196 VLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHI 255
Query: 179 QNILSSSGIRVEGFMGS-----QSPAGGMQNVHVAICTIEKANSMINRLLDNGNI----E 229
++S++ + +G Q Q + + T + +M+ + G +
Sbjct: 256 NALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMMQEA-ETGEFLAEWK 314
Query: 230 DLGAVVVDELHLLGDQNRGYILEL--LLTKIKYVTSKSDLLIQVIGMSATL 278
DL +VVDE + ++ GY EL +L KI + K L Q + SATL
Sbjct: 315 DLKCLVVDETDRMVEE--GYFAELTHILNKIHEESEKEKL--QTLVFSATL 361
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 35.1 bits (77), Expect = 0.38
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H ER F+SGA VL+AT+ + G+++ +I P NI Y
Sbjct: 594 HGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVIN----YDMPNNIDDYIH 649
Query: 484 MSGRAGRMGRDTKGESIL 501
GR GR+G + S +
Sbjct: 650 RIGRTGRVGNSGRATSFI 667
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 35.1 bits (77), Expect = 0.38
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H ER F+SGA VL+AT+ + G+++ +I P NI Y
Sbjct: 594 HGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVIN----YDMPNNIDDYIH 649
Query: 484 MSGRAGRMGRDTKGESIL 501
GR GR+G + S +
Sbjct: 650 RIGRTGRVGNSGRATSFI 667
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 34.7 bits (76), Expect = 0.50
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H L ER+ F++G +LVAT+ + G+++P K +I + P ++ Y
Sbjct: 458 HGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDL----PSDVDEYVH 513
Query: 484 MSGRAGRMG 492
GR GR+G
Sbjct: 514 RIGRTGRVG 522
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 33.9 bits (74), Expect = 0.88
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 439 FKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQMSGRAGRMG 492
F I L+ATS L GV++ ++I+ F + P+++ SY Q GRA R G
Sbjct: 449 FHRNEINCLIATSVLEEGVDVKQCNLVIK---FDR-PLDMRSYVQSKGRARRAG 498
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 33.1 bits (72), Expect = 1.5
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 423 HHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYK 482
+HAGL + R ++ ++ + V+ AT G++ P + +I + P +I Y
Sbjct: 499 YHAGLNDNLRVSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSL----PKSIEGYY 554
Query: 483 QMSGRAGRMG 492
Q +GRAGR G
Sbjct: 555 QETGRAGRDG 564
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 33.1 bits (72), Expect = 1.5
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 423 HHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYK 482
+HAGL + R ++ ++ + V+ AT G++ P + +I + P +I Y
Sbjct: 499 YHAGLNDNLRVSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSL----PKSIEGYY 554
Query: 483 QMSGRAGRMG 492
Q +GRAGR G
Sbjct: 555 QETGRAGRDG 564
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 32.7 bits (71), Expect = 2.0
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H + +ER FK G IR LV + ++ G+++ +I + P Y
Sbjct: 536 HGDRSAEERQSSLEGFKKGIIRFLVCSDVVARGLDVQGVPFVISVTL----PDEKSMYVH 591
Query: 484 MSGRAGRMGRDTKGESILICSEAEKKIGFN 513
GR GR R G SI + SE E+K ++
Sbjct: 592 RIGRVGRAER--MGLSISLVSEYEEKAWYH 619
>AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical
protein H04J21.1 protein.
Length = 1032
Score = 32.3 bits (70), Expect = 2.7
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 1011 IKKIKVDMKKYSGMDLAQLTIKVNNRQTKLKNLTLAQESCVK---AWAIEMISEKQQNAL 1067
+K ++ K Y +D + LT N+ T +KNL A E+ +K AIE E A
Sbjct: 258 LKLVEGFNKSYHELDFSLLTTSPNSFLTSIKNLNGAPETVLKLSSLHAIEDFIESFNTAN 317
Query: 1068 YESYQNAINVEIKVLKILSN 1087
Y ++ + VLKI+ N
Sbjct: 318 YSTFDQFCGED--VLKIIDN 335
>AF024500-6|AAB70361.1| 357|Caenorhabditis elegans Hypothetical
protein K06H6.1 protein.
Length = 357
Score = 32.3 bits (70), Expect = 2.7
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 1188 YSEGDRIMSSYSTFTCTGRITMHEPNLQNVPRTFSIPLRYLTFDNTTSDEVIEFNCRNVF 1247
+SE D + Y T G ITM E N +NV +TF + T+ T V E C +F
Sbjct: 33 FSEPDLNLQEYKVKTHKGFITMEELN-ENVYKTFGYKIIRPTYPVPTVKMVAEPTCSEIF 91
>L10986-13|AAL08033.1| 140|Caenorhabditis elegans Hypothetical
protein F10E9.12 protein.
Length = 140
Score = 31.9 bits (69), Expect = 3.6
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 884 ATTTNNIKNSVTSRNTSEKDISLFSSDGDNSSLFEDSLPLDLIPSKLLQDVETPNKREQL 943
A T NI +S S N +E +I + SS+ +D LPL+ + K + E P + +
Sbjct: 17 AETEVNITSSEESHNETESEIHIPSSEESPKEEIDDKLPLEAVLQKSKEFDEIPTTPDNI 76
>Z67995-5|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 31.5 bits (68), Expect = 4.7
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 1095 VDKELVSRLLTDVRDSQDVLQKKAFKICGYHFNFNSSKDVAKVLGIYN 1142
+D ELV+ +L R +Q+ L K F + + F N SKDV K++ Y+
Sbjct: 262 MDSELVNNMLRQQRMAQNGLTSKTFAL--HRFIGNDSKDVTKLILKYS 307
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 31.5 bits (68), Expect = 4.7
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 1095 VDKELVSRLLTDVRDSQDVLQKKAFKICGYHFNFNSSKDVAKVLGIYN 1142
+D ELV+ +L R +Q+ L K F + + F N SKDV K++ Y+
Sbjct: 262 MDSELVNNMLRQQRMAQNGLTSKTFAL--HRFIGNDSKDVTKLILKYS 307
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 31.5 bits (68), Expect = 4.7
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H ER F++G+ VL+AT+ G+++ +I + P NI Y
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM----PDNIDDYIH 692
Query: 484 MSGRAGRMGRDTKGESILI--CSEAEKKIG 511
GR GR+G + S + CS + +G
Sbjct: 693 RIGRTGRVGNSGRATSFISEDCSLLSELVG 722
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 31.5 bits (68), Expect = 4.7
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 415 TISFGVGYHHAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQ 474
+I V H + +ER+ + F S RVLV T ++ G+N+ + +II V
Sbjct: 249 SIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMNI-RKSLIINYDVSG-- 305
Query: 475 PINILSYKQMSGRAGRMGRDTKGESILICSE 505
N+ +Y +GR G G +KG I +E
Sbjct: 306 --NMENYMLRNGRQGNFG--SKGLPISFFTE 332
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 31.5 bits (68), Expect = 4.7
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H ER F++G+ VL+AT+ G+++ +I + P NI Y
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM----PDNIDDYIH 692
Query: 484 MSGRAGRMGRDTKGESILI--CSEAEKKIG 511
GR GR+G + S + CS + +G
Sbjct: 693 RIGRTGRVGNSGRATSFISEDCSLLSELVG 722
>AF040657-5|AAB95052.1| 317|Caenorhabditis elegans Hypothetical
protein T20H9.3 protein.
Length = 317
Score = 31.5 bits (68), Expect = 4.7
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 1051 VKAWAIEMISEKQQNALYESYQNAINVEIK-------VLKILSNCELHGIVVDKELVSRL 1103
++ W I I + Q+ A E ++ I+ +++ + E+ GI DK V
Sbjct: 147 IELWYISSIDQFQRIASLEQWKKTKRFCIEDHLFDNEQIELFFHFEVFGIDFDKFSVQNA 206
Query: 1104 LTDVRDSQDVLQKKAFKICGYHFNFNSSKDVAKVLGI-YNGRKT 1146
+ VRD D+L++ F+ CG +F + ++AK+ + Y G +T
Sbjct: 207 VK-VRD--DLLRRSTFQSCGINFKESGPVEIAKLFKLDYVGGET 247
>AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical
protein R155.2 protein.
Length = 1308
Score = 31.5 bits (68), Expect = 4.7
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 42 LEKSENKQKHVNRRFVNTASNNSLLNKTAEGKLTASKEVRNTQKIQSKKLKDWGLPIEIS 101
++ S++K+ F N A ++ ++ G +T+ +E+ + QK+ K LKD I++
Sbjct: 634 IKSSKDKETEALSVFTNIAKDSQVIGMVTRG-ITSMEEMAS-QKVDWKPLKDLSAAIKVM 691
Query: 102 KKYEERGITEM 112
KK + ++
Sbjct: 692 KKMNPADVKKL 702
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 31.5 bits (68), Expect = 4.7
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H ER F++G+ VL+AT+ G+++ +I + P NI Y
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM----PDNIDDYIH 692
Query: 484 MSGRAGRMGRDTKGESILI--CSEAEKKIG 511
GR GR+G + S + CS + +G
Sbjct: 693 RIGRTGRVGNSGRATSFISEDCSLLSELVG 722
>AC024761-2|AAF59463.1| 174|Caenorhabditis elegans Hypothetical
protein Y38C1AA.9 protein.
Length = 174
Score = 31.5 bits (68), Expect = 4.7
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 1322 MGNKTLSQHLDVSEMEASLFMDSFERTYPAIRVFTKSVIEECKRQ--GFVETLSGRRRYL 1379
+GNKT+S +++S++EA E+T V + EE K + VE+L R
Sbjct: 33 VGNKTISGEVEISDVEAE------EKTDKKREVDANDIQEEVKAELDKAVESLKETARER 86
Query: 1380 PDITSHITSRRNTAERQAVNTMIQGSAADIAKSAMCSIEDGIN 1422
+ + + SR + A++ +G+ K+ +C+ + G +
Sbjct: 87 EEEENSLLSRSSLESCGAIDCNHRGTCLGTKKTFLCACQLGFS 129
>Z81103-4|CAB03210.1| 686|Caenorhabditis elegans Hypothetical
protein M04G12.3 protein.
Length = 686
Score = 31.1 bits (67), Expect = 6.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 617 LTLFCELQKARQCLVLETDLHLIYLVTPYSVS 648
LT C L+ Q ++L T H+IYL +PY S
Sbjct: 333 LTQGCHLKLKGQMMMLSTKKHIIYLCSPYVTS 364
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 31.1 bits (67), Expect = 6.2
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H + +ER AFK R+LVAT G+++ ++ P + SY
Sbjct: 314 HRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFN----YDMPEDSDSYLH 369
Query: 484 MSGRAGRMGRDTKGESILICSE 505
RAGR G TKG +I S+
Sbjct: 370 RVARAGRFG--TKGLAITFVSD 389
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 31.1 bits (67), Expect = 6.2
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H + +ER AFK R+LVAT G+++ ++ P + SY
Sbjct: 306 HRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFN----YDMPEDSDSYLH 361
Query: 484 MSGRAGRMGRDTKGESILICSE 505
RAGR G TKG +I S+
Sbjct: 362 RVARAGRFG--TKGLAITFVSD 381
>AY652943-1|AAT73710.1| 686|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 686
Score = 31.1 bits (67), Expect = 6.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 617 LTLFCELQKARQCLVLETDLHLIYLVTPYSVS 648
LT C L+ Q ++L T H+IYL +PY S
Sbjct: 333 LTQGCHLKLKGQMMMLSTKKHIIYLCSPYVTS 364
>AL132860-15|CAB60497.1| 619|Caenorhabditis elegans Hypothetical
protein Y56A3A.16 protein.
Length = 619
Score = 31.1 bits (67), Expect = 6.2
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 1226 RYLTFDNTTSDEVIEFNCRNVFRAAPGSVMVSADYCQLEMRLLTHFSEDSALTRIMKSDV 1285
R FDN D ++E CR ++ +S C+ R L H + D ++R+++
Sbjct: 134 RVCRFDNDVDDNLLETTCR--------TLQISMGLCE-RSRWLNHLARDPVMSRLVRELD 184
Query: 1286 DVFKSIAASWSDVPEGE 1302
+ F AS SD PE +
Sbjct: 185 EDF----ASTSDEPEDQ 197
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 31.1 bits (67), Expect = 6.2
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 406 VGLDQILQKTISFGVGYH--HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARK 463
V +D I + + GV H G +R AF+ VLVAT S G++ +
Sbjct: 452 VDVDNIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIE 511
Query: 464 VIIRSPVFQKQPINILSYKQMSGRAGRMGR 493
+I + P +I +Y GR GR GR
Sbjct: 512 HVINFDM----PEDIENYVHRIGRTGRSGR 537
>Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical
protein C53D6.6 protein.
Length = 615
Score = 30.7 bits (66), Expect = 8.2
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 623 LQKARQCLVLETDLHLIYLVTPYSVSSQWGNIDWLHLLNLWESLTKAMKKVGELVGVQES 682
+QK + V ET L Y+ + + G ++W+ +++++E TK L G+ ++
Sbjct: 298 VQKINESAVYETSLIGEYMTIDSADLVKSGKLNWITVVSMFEQFTK-------LKGLLDT 350
Query: 683 FIIKCLRGLNMKHLDSNKLNIHKRFYTAL 711
F++ + GL + D + + I R + L
Sbjct: 351 FLMNDMEGLMLYQQDYDLMEIILRTLSPL 379
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 30.7 bits (66), Expect = 8.2
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
Query: 424 HAGLTLDERDIIEGAFKSGAIRVLVATSTLSSGVNLPARKVIIRSPVFQKQPINILSYKQ 483
H ++ ++R FKS A +LV T + G+++P ++I P Y
Sbjct: 314 HGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVIN----YDMPSQSKDYVH 369
Query: 484 MSGRAGRMGRDTKGESILICS----EAEKKIGFNLMMGDLDPVKSCIETK 529
GR R GR G +I + + EA +KI NL LD K C+E +
Sbjct: 370 RVGRTARAGR--SGIAITVVTQYDVEAYQKIEANLGK-KLDEYK-CVENE 415
>U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform b protein.
Length = 392
Score = 30.7 bits (66), Expect = 8.2
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 872 LPKSCLSDEDLAATTTNNIKNSVT-SRNTSEKDISLFSSDGDNSSL 916
LP S D+DL +T+++ ++N T + E+ S+ S++ D+ S+
Sbjct: 43 LPSSSSKDDDLLSTSSDEVENMATRTLQQLEESTSIISANSDDDSV 88
>U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform a protein.
Length = 481
Score = 30.7 bits (66), Expect = 8.2
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 872 LPKSCLSDEDLAATTTNNIKNSVT-SRNTSEKDISLFSSDGDNSSL 916
LP S D+DL +T+++ ++N T + E+ S+ S++ D+ S+
Sbjct: 43 LPSSSSKDDDLLSTSSDEVENMATRTLQQLEESTSIISANSDDDSV 88
>U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 30.7 bits (66), Expect = 8.2
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 872 LPKSCLSDEDLAATTTNNIKNSVT-SRNTSEKDISLFSSDGDNSSL 916
LP S D+DL +T+++ ++N T + E+ S+ S++ D+ S+
Sbjct: 43 LPSSSSKDDDLLSTSSDEVENMATRTLQQLEESTSIISANSDDDSV 88
>U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 30.7 bits (66), Expect = 8.2
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 872 LPKSCLSDEDLAATTTNNIKNSVT-SRNTSEKDISLFSSDGDNSSL 916
LP S D+DL +T+++ ++N T + E+ S+ S++ D+ S+
Sbjct: 43 LPSSSSKDDDLLSTSSDEVENMATRTLQQLEESTSIISANSDDDSV 88
>AC006617-6|AAF39769.1| 303|Caenorhabditis elegans Hypothetical
protein C39B5.4 protein.
Length = 303
Score = 30.7 bits (66), Expect = 8.2
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 1054 WAIEMISEKQQNALYESYQNAINVEI-------KVLKILSNCELHGIVVDKELVSRLLTD 1106
W + I E Q + + ++NA ++ K + L + + I E + +
Sbjct: 179 WGADAIDE--QITILDQWKNAKKFQLWNSDFDAKFISHLFHFQCFTINTMTEFSIEAMIE 236
Query: 1107 VRDSQDVLQKKAFKICGYHFNFNSSKDVAKVLGIYNG 1143
+RD D+L++ F+ C +FN ++ K++AKV G
Sbjct: 237 IRD--DLLRRSTFESCYIYFNSSNPKELAKVFNYTGG 271
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.133 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,188,293
Number of Sequences: 27539
Number of extensions: 1427146
Number of successful extensions: 4045
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 3930
Number of HSP's gapped (non-prelim): 110
length of query: 1486
length of database: 12,573,161
effective HSP length: 91
effective length of query: 1395
effective length of database: 10,067,112
effective search space: 14043621240
effective search space used: 14043621240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)
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