GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002416-TA|BGIBMGA002416-PA|undefined
         (77 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   1.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   1.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    20   2.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    20   2.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    20   2.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    19   4.5  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory
          receptor candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 1.5
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 4  YVGELKSQVPYELPALPSNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAAFKTYDFIS 63
          YV       PY L  + +  ++   FK+ W    +     L+ L   T +A F    F  
Sbjct: 25 YVCTFFGLAPYSLVRVENGKKV---FKFAWWPLTRNALLVLILLGALTYHAIFDLISFKD 81

Query: 64 SSLE 67
          S L+
Sbjct: 82 SDLQ 85


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory
          receptor candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 1.5
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 4  YVGELKSQVPYELPALPSNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAAFKTYDFIS 63
          YV       PY L  + +  ++   FK+ W    +     L+ L   T +A F    F  
Sbjct: 25 YVCTFFGLAPYSLVRVENGKKV---FKFAWWPLTRNALLVLILLGALTYHAIFDLISFKD 81

Query: 64 SSLE 67
          S L+
Sbjct: 82 SDLQ 85


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
          transcription factor Labialprotein.
          Length = 353

 Score = 20.2 bits (40), Expect = 2.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 46 ELPTHTSNAAFKTYDFISSSLETPEPHQE 74
          ++P H SN  ++     + S ETP   QE
Sbjct: 34 QMPPHYSNYHYEDPYGYTGSEETPPSPQE 62


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
          protein.
          Length = 210

 Score = 20.2 bits (40), Expect = 2.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 46 ELPTHTSNAAFKTYDFISSSLETPEPHQE 74
          ++P H SN  ++     + S ETP   QE
Sbjct: 34 QMPPHYSNYHYEDPYGYTGSEETPPSPQE 62


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
          protein.
          Length = 253

 Score = 20.2 bits (40), Expect = 2.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 46 ELPTHTSNAAFKTYDFISSSLETPEPHQE 74
          ++P H SN  ++     + S ETP   QE
Sbjct: 34 QMPPHYSNYHYEDPYGYTGSEETPPSPQE 62


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 53  NAAFKTYDFISSSLETPEP 71
           NAA K+ +     + TPEP
Sbjct: 383 NAALKSDEIPPEPVPTPEP 401


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.133    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,008
Number of Sequences: 317
Number of extensions: 784
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 77
length of database: 114,650
effective HSP length: 46
effective length of query: 31
effective length of database: 100,068
effective search space:  3102108
effective search space used:  3102108
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.3 bits)
S2: 36 (18.6 bits)