GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002416-TA|BGIBMGA002416-PA|undefined
         (77 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   0.25 
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        19   7.1  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    19   7.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    19   9.4  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      19   9.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           19   9.4  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 0.25
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 20 PSNDRISYLFKYYWNCGVKATFRFL 44
          P +D I +LF++ WN   K   +FL
Sbjct: 28 PGHDAIVHLFEWKWNDIAKECEQFL 52


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 19.0 bits (37), Expect = 7.1
 Identities = 6/15 (40%), Positives = 8/15 (53%)

Query: 20 PSNDRISYLFKYYWN 34
          P N++    F  YWN
Sbjct: 34 PDNNKTVREFNVYWN 48



 Score = 18.6 bits (36), Expect = 9.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)

Query: 15  ELPALPSNDRISYLFK 30
           E   +  ND++S+LF+
Sbjct: 234 EATTMQENDKMSWLFE 249


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 19.0 bits (37), Expect = 7.1
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 22  NDRISYLFKYYWNCGVKATFRFLVELPTHTSNAA 55
           NDR+ +L     N G        ++LP   +N A
Sbjct: 261 NDRLGFLTFCPTNLGTTVRASVHIKLPKLAANRA 294


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
          esterase protein.
          Length = 567

 Score = 18.6 bits (36), Expect = 9.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)

Query: 3  PYVGELKSQVPYELPA 18
          P VG+ + + P ++PA
Sbjct: 56 PPVGKFRFKAPQKIPA 71


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 18.6 bits (36), Expect = 9.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)

Query: 68  TPEPHQEKDK 77
           TP+PH E  K
Sbjct: 183 TPDPHDETAK 192


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 18.6 bits (36), Expect = 9.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)

Query: 3  PYVGELKSQVPYELPA 18
          P VG+ + + P ++PA
Sbjct: 56 PPVGKFRFKAPQKIPA 71


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.133    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,409
Number of Sequences: 429
Number of extensions: 954
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 77
length of database: 140,377
effective HSP length: 46
effective length of query: 31
effective length of database: 120,643
effective search space:  3739933
effective search space used:  3739933
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.3 bits)
S2: 36 (18.6 bits)