Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002415-TA|BGIBMGA002415-PA|IPR006172|DNA-directed DNA
polymerase B, IPR012337|Polynucleotidyl transferase, Ribonuclease H
fold, IPR004578|DNA polymerase (pol2), IPR006133|DNA polymerase B,
exonuclease, IPR006134|DNA polymerase B region
(1644 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16UP4 Cluster: DNA polymerase; n=1; Aedes aegypti|Rep:... 751 0.0
UniRef50_Q9GSR1 Cluster: DNA polymerase; n=4; Sophophora|Rep: DN... 733 0.0
UniRef50_O60673 Cluster: DNA polymerase zeta catalytic subunit; ... 725 0.0
UniRef50_UPI00015B42EF Cluster: PREDICTED: similar to DNA polyme... 713 0.0
UniRef50_Q27RS8 Cluster: DNA polymerase; n=36; Neurospora|Rep: D... 527 e-147
UniRef50_A1D832 Cluster: DNA polymerase; n=9; Pezizomycotina|Rep... 526 e-147
UniRef50_Q2H423 Cluster: DNA polymerase; n=6; Pezizomycotina|Rep... 524 e-147
UniRef50_A7PS77 Cluster: Chromosome chr14 scaffold_27, whole gen... 517 e-145
UniRef50_Q4PD82 Cluster: DNA polymerase; n=1; Ustilago maydis|Re... 516 e-144
UniRef50_Q0V5M4 Cluster: DNA polymerase; n=2; Pezizomycotina|Rep... 515 e-144
UniRef50_P14284 Cluster: DNA polymerase zeta catalytic subunit; ... 515 e-144
UniRef50_Q9P6L6 Cluster: DNA polymerase; n=1; Schizosaccharomyce... 508 e-142
UniRef50_Q55Y13 Cluster: DNA polymerase; n=2; Filobasidiella neo... 503 e-140
UniRef50_O64795 Cluster: DNA polymerase; n=4; Magnoliophyta|Rep:... 501 e-140
UniRef50_Q6CTU9 Cluster: DNA polymerase; n=1; Kluyveromyces lact... 494 e-138
UniRef50_Q6FK10 Cluster: DNA polymerase; n=1; Candida glabrata|R... 490 e-136
UniRef50_Q75F27 Cluster: DNA polymerase; n=1; Eremothecium gossy... 489 e-136
UniRef50_Q6BUR9 Cluster: DNA polymerase; n=2; Fungi|Rep: DNA pol... 480 e-133
UniRef50_A3LPZ9 Cluster: DNA polymerase zeta; n=1; Pichia stipit... 476 e-132
UniRef50_Q6CB61 Cluster: DNA polymerase; n=1; Yarrowia lipolytic... 472 e-131
UniRef50_A5DZN4 Cluster: DNA polymerase; n=2; Saccharomycetales|... 466 e-129
UniRef50_A5DLL4 Cluster: DNA polymerase; n=1; Pichia guilliermon... 461 e-128
UniRef50_Q9BKQ3 Cluster: DNA polymerase; n=2; Caenorhabditis|Rep... 425 e-117
UniRef50_Q07G15 Cluster: REV3-like, catalytic subunit of DNA pol... 423 e-116
UniRef50_A2FWK3 Cluster: DNA polymerase; n=1; Trichomonas vagina... 414 e-114
UniRef50_UPI00006CCBA6 Cluster: DNA polymerase family B containi... 361 9e-98
UniRef50_Q4DKU0 Cluster: DNA polymerase zeta catalytic subunit, ... 343 3e-92
UniRef50_Q57YY4 Cluster: DNA polymerase zeta catalytic subunit, ... 336 4e-90
UniRef50_Q4QB19 Cluster: DNA polymerase zeta catalytic subunit, ... 334 2e-89
UniRef50_A0BFH6 Cluster: DNA polymerase; n=1; Paramecium tetraur... 333 3e-89
UniRef50_Q5A4E5 Cluster: DNA polymerase; n=1; Candida albicans|R... 319 4e-85
UniRef50_A2YPR6 Cluster: DNA polymerase; n=3; Oryza sativa|Rep: ... 303 2e-80
UniRef50_UPI0000498DAE Cluster: DNA polymerase zeta catalytic su... 298 7e-79
UniRef50_Q233J3 Cluster: DNA polymerase family B containing prot... 298 9e-79
UniRef50_A7EFB8 Cluster: Putative uncharacterized protein; n=1; ... 290 2e-76
UniRef50_Q55AZ3 Cluster: DNA polymerase; n=2; Dictyostelium disc... 278 8e-73
UniRef50_A7APT4 Cluster: DNA polymerase family B family protein;... 254 2e-65
UniRef50_P90829 Cluster: DNA polymerase delta catalytic subunit;... 252 8e-65
UniRef50_P28340 Cluster: DNA polymerase delta catalytic subunit;... 250 2e-64
UniRef50_P52431 Cluster: DNA polymerase delta catalytic subunit;... 249 4e-64
UniRef50_Q5CWN2 Cluster: DNA polymerase; n=3; Cryptosporidium|Re... 246 4e-63
UniRef50_P30315 Cluster: DNA polymerase delta catalytic subunit;... 243 4e-62
UniRef50_Q4N7C1 Cluster: DNA polymerase; n=2; Theileria|Rep: DNA... 239 6e-61
UniRef50_Q308M6 Cluster: DNA polymerase; n=1; Homo sapiens|Rep: ... 232 5e-59
UniRef50_UPI0000499E46 Cluster: DNA polymerase delta catalytic s... 226 5e-57
UniRef50_Q8SQP5 Cluster: DNA polymerase; n=1; Encephalitozoon cu... 211 1e-52
UniRef50_Q22HL1 Cluster: DNA polymerase family B containing prot... 203 3e-50
UniRef50_A7S2K2 Cluster: Predicted protein; n=1; Nematostella ve... 198 8e-49
UniRef50_Q4SY85 Cluster: Chromosome undetermined SCAF12156, whol... 197 2e-48
UniRef50_A6R857 Cluster: DNA polymerase; n=1; Ajellomyces capsul... 193 3e-47
UniRef50_P15436 Cluster: DNA polymerase delta catalytic subunit;... 191 1e-46
UniRef50_A7QST5 Cluster: Chromosome chr4 scaffold_162, whole gen... 167 2e-39
UniRef50_Q8QNI4 Cluster: DNA polymerase; n=1; Ectocarpus silicul... 152 7e-35
UniRef50_Q9DKT8 Cluster: DNA polymerase; n=2; Herpesviridae|Rep:... 146 4e-33
UniRef50_P52342 Cluster: DNA polymerase; n=22; Herpesviridae|Rep... 145 8e-33
UniRef50_Q8IJ38 Cluster: DNA polymerase; n=1; Plasmodium falcipa... 144 2e-32
UniRef50_P03198 Cluster: DNA polymerase; n=157; Herpesviridae|Re... 142 5e-32
UniRef50_A2DY14 Cluster: DNA polymerase; n=2; Trichomonas vagina... 140 2e-31
UniRef50_P30321 Cluster: DNA polymerase; n=67; Phycodnaviridae|R... 138 9e-31
UniRef50_A5KDT7 Cluster: DNA polymerase; n=1; Plasmodium vivax|R... 137 3e-30
UniRef50_Q8TSB3 Cluster: DNA polymerase; n=4; Methanosarcinaceae... 134 1e-29
UniRef50_O41930 Cluster: DNA polymerase; n=128; Gammaherpesvirin... 132 8e-29
UniRef50_O71121 Cluster: DNA polymerase; n=9; Cytomegalovirus|Re... 129 7e-28
UniRef50_A0D7P3 Cluster: DNA polymerase; n=1; Paramecium tetraur... 127 3e-27
UniRef50_Q4JF81 Cluster: DNA polymerase; n=1; Heterosigma akashi... 124 2e-26
UniRef50_Q8TWJ5 Cluster: DNA polymerase; n=1; Methanopyrus kandl... 120 4e-25
UniRef50_UPI0000DB7455 Cluster: PREDICTED: similar to DNA polyme... 117 2e-24
UniRef50_Q54SV8 Cluster: DNA polymerase; n=1; Dictyostelium disc... 117 2e-24
UniRef50_Q6XM69 Cluster: DNA polymerase; n=2; Phaeovirus|Rep: DN... 115 1e-23
UniRef50_Q5B0J8 Cluster: DNA polymerase; n=28; Eukaryota|Rep: DN... 109 5e-22
UniRef50_Q8SRW2 Cluster: DNA polymerase; n=1; Encephalitozoon cu... 108 1e-21
UniRef50_Q27152 Cluster: DNA polymerase alpha catalytic subunit;... 108 1e-21
UniRef50_P09252 Cluster: DNA polymerase; n=20; Herpesviridae|Rep... 107 3e-21
UniRef50_O00874 Cluster: DNA polymerase alpha catalytic subunit;... 106 4e-21
UniRef50_Q5Y970 Cluster: DNA polymerase; n=24; Herpesviridae|Rep... 102 7e-20
UniRef50_Q23AJ0 Cluster: DNA polymerase catalytic subunit; n=2; ... 101 1e-19
UniRef50_Q6UDK1 Cluster: DNA polymerase; n=7; Alphaherpesvirinae... 101 2e-19
UniRef50_A5KAH7 Cluster: DNA polymerase; n=1; Plasmodium vivax|R... 101 2e-19
UniRef50_P09884 Cluster: DNA polymerase alpha catalytic subunit;... 101 2e-19
UniRef50_Q85428 Cluster: DNA polymerase; n=10; Herpesviridae|Rep... 100 3e-19
UniRef50_A2FME7 Cluster: DNA polymerase; n=1; Trichomonas vagina... 100 4e-19
UniRef50_A3QME0 Cluster: DNA polymerase; n=2; Euplotes|Rep: DNA ... 99 5e-19
UniRef50_Q8I944 Cluster: DNA polymerase; n=3; Urostyla grandis|R... 99 9e-19
UniRef50_Q9E6N9 Cluster: DNA polymerase; n=9; Herpesviridae|Rep:... 98 2e-18
UniRef50_Q918Y3 Cluster: DNA polymerase; n=6; unknown phycodnavi... 98 2e-18
UniRef50_Q66230 Cluster: DNA polymerase; n=3; Prymnesiovirus|Rep... 97 3e-18
UniRef50_UPI00015B62CE Cluster: PREDICTED: similar to DNA polyme... 96 6e-18
UniRef50_Q782R4 Cluster: DNA polymerase; n=2; Gallid herpesvirus... 96 8e-18
UniRef50_P07918 Cluster: DNA polymerase; n=128; Viruses|Rep: DNA... 95 2e-17
UniRef50_Q4Y991 Cluster: DNA polymerase; n=9; Plasmodium (Vincke... 94 3e-17
UniRef50_A3QME1 Cluster: DNA polymerase; n=1; Eschaneustyla sp. ... 94 3e-17
UniRef50_Q6X242 Cluster: DNA polymerase; n=119; Herpesviridae|Re... 93 4e-17
UniRef50_P27172 Cluster: DNA polymerase; n=23; Herpesviridae|Rep... 93 4e-17
UniRef50_P08546 Cluster: DNA polymerase; n=126; Herpesviridae|Re... 93 4e-17
UniRef50_Q9Y1T1 Cluster: DNA polymerase; n=1; Toxoplasma gondii|... 93 8e-17
UniRef50_A7KAW4 Cluster: DNA polymerase; n=1; Apodemus flavicoll... 92 1e-16
UniRef50_A0B8Z8 Cluster: DNA polymerase; n=1; Methanosaeta therm... 91 2e-16
UniRef50_Q8QS34 Cluster: DNA polymerase; n=13; Herpesviridae|Rep... 90 5e-16
UniRef50_UPI00015B4719 Cluster: PREDICTED: similar to DNA polyme... 89 9e-16
UniRef50_Q5CU42 Cluster: DNA polymerase; n=2; Cryptosporidium|Re... 88 2e-15
UniRef50_Q4U3V0 Cluster: DNA polymerase; n=3; Ascovirus|Rep: DNA... 88 2e-15
UniRef50_Q9NAH1 Cluster: DNA polymerase; n=2; Caenorhabditis|Rep... 87 3e-15
UniRef50_A2E9P0 Cluster: DNA polymerase; n=1; Trichomonas vagina... 85 1e-14
UniRef50_Q0W954 Cluster: DNA-directed DNA polymerase B; n=1; unc... 85 2e-14
UniRef50_A2DDR9 Cluster: DNA polymerase; n=1; Trichomonas vagina... 83 5e-14
UniRef50_Q9YUS3 Cluster: DNA polymerase; n=4; Herpesviridae|Rep:... 83 6e-14
UniRef50_Q990K4 Cluster: DNA polymerase; n=9; Chlorovirus|Rep: D... 83 8e-14
UniRef50_Q8QZ01 Cluster: DNA polymerase; n=8; Ranavirus|Rep: DNA... 83 8e-14
UniRef50_Q97AH3 Cluster: DNA polymerase; n=6; Euryarchaeota|Rep:... 83 8e-14
UniRef50_P30317 Cluster: DNA polymerase (EC 2.7.7.7) (Vent DNA p... 82 1e-13
UniRef50_Q196U0 Cluster: DNA polymerase; n=5; Iridoviridae|Rep: ... 82 1e-13
UniRef50_A7KAV6 Cluster: DNA polymerase; n=1; Microtus arvalis c... 81 2e-13
UniRef50_Q013X2 Cluster: DNA polymerase; n=2; Ostreococcus|Rep: ... 81 3e-13
UniRef50_Q7QQB5 Cluster: DNA polymerase; n=2; Giardia intestinal... 81 3e-13
UniRef50_Q7R6L0 Cluster: DNA polymerase; n=1; Giardia lamblia AT... 80 4e-13
UniRef50_O59610 Cluster: DNA polymerase (EC 2.7.7.7) [Contains: ... 80 4e-13
UniRef50_Q4P5T4 Cluster: DNA polymerase; n=1; Ustilago maydis|Re... 80 6e-13
UniRef50_O70736 Cluster: DNA polymerase; n=7; Infectious spleen ... 79 1e-12
UniRef50_Q9DSV8 Cluster: DNA polymerase; n=1; Diadromus pulchell... 78 2e-12
UniRef50_Q0E5A0 Cluster: DNA polymerase; n=11; root|Rep: DNA pol... 78 2e-12
UniRef50_A7U6F2 Cluster: Putative B family DNA polymerase I; n=1... 78 2e-12
UniRef50_P28040 Cluster: DNA polymerase alpha catalytic subunit;... 78 2e-12
UniRef50_UPI0000499846 Cluster: DNA polymerase alpha catalytic s... 77 3e-12
UniRef50_Q677R2 Cluster: DNA polymerase; n=3; Lymphocystivirus|R... 77 4e-12
UniRef50_Q55RB8 Cluster: DNA polymerase; n=2; Filobasidiella neo... 77 4e-12
UniRef50_Q74N74 Cluster: DNA polymerase; n=1; Nanoarchaeum equit... 77 4e-12
UniRef50_Q0W0J7 Cluster: DNA-directed DNA polymerase B; n=1; unc... 77 4e-12
UniRef50_Q16ZB1 Cluster: DNA polymerase; n=2; Culicidae|Rep: DNA... 77 5e-12
UniRef50_A7PLB6 Cluster: Chromosome chr7 scaffold_20, whole geno... 76 7e-12
UniRef50_A0DPB2 Cluster: DNA polymerase; n=1; Paramecium tetraur... 76 7e-12
UniRef50_UPI0000D56089 Cluster: PREDICTED: similar to CG6349-PA;... 75 1e-11
UniRef50_Q9TX75 Cluster: DNA polymerase alpha, DNAPOL alpha; n=1... 75 1e-11
UniRef50_A5DZ55 Cluster: DNA polymerase; n=5; Saccharomycetales|... 74 3e-11
UniRef50_Q8V1Z2 Cluster: DNA-directed DNA polymerase; n=13; root... 74 4e-11
UniRef50_P26019 Cluster: DNA polymerase alpha catalytic subunit;... 73 5e-11
UniRef50_Q4SMZ1 Cluster: DNA polymerase; n=3; Deuterostomia|Rep:... 73 7e-11
UniRef50_Q7ZA56 Cluster: DNA polymerase; n=1; Coprinopsis cinere... 72 1e-10
UniRef50_Q6C675 Cluster: DNA polymerase; n=1; Yarrowia lipolytic... 72 2e-10
UniRef50_P13382 Cluster: DNA polymerase alpha catalytic subunit ... 69 1e-09
UniRef50_Q9FHA3 Cluster: DNA polymerase alpha catalytic subunit;... 68 2e-09
UniRef50_A7KAV9 Cluster: DNA polymerase; n=1; Myodes glareolus c... 68 2e-09
UniRef50_O33845 Cluster: DNA polymerase (EC 2.7.7.7) (Pol Tfu) [... 67 4e-09
UniRef50_O29753 Cluster: DNA polymerase; n=1; Archaeoglobus fulg... 66 6e-09
UniRef50_Q4JCH8 Cluster: DNA polymerase B3; n=3; Sulfolobaceae|R... 66 8e-09
UniRef50_O27276 Cluster: DNA polymerase; n=3; Methanobacteriacea... 66 8e-09
UniRef50_O48653 Cluster: DNA polymerase alpha catalytic subunit;... 64 4e-08
UniRef50_O93746 Cluster: DNA polymerase 2; n=15; Thermoprotei|Re... 64 4e-08
UniRef50_Q58295 Cluster: DNA polymerase (EC 2.7.7.7) [Contains: ... 62 9e-08
UniRef50_A7AR93 Cluster: DNA polymerase alpha subunit, putative;... 62 1e-07
UniRef50_A7SAB6 Cluster: Predicted protein; n=1; Nematostella ve... 61 3e-07
UniRef50_A5C6G9 Cluster: Putative uncharacterized protein; n=1; ... 60 5e-07
UniRef50_Q4N0E2 Cluster: DNA polymerase alpha, putative; n=3; Th... 60 7e-07
UniRef50_P52025 Cluster: DNA polymerase; n=6; Methanococcus|Rep:... 60 7e-07
UniRef50_Q87NC2 Cluster: DNA polymerase; n=2; Vibrio|Rep: DNA po... 58 3e-06
UniRef50_P74918 Cluster: DNA polymerase (EC 2.7.7.7) (Pol Tfu) [... 58 3e-06
UniRef50_Q4Z1C7 Cluster: Putative uncharacterized protein; n=5; ... 55 1e-05
UniRef50_P26811 Cluster: DNA polymerase 1; n=9; Thermoprotei|Rep... 54 3e-05
UniRef50_P21189 Cluster: DNA polymerase II; n=165; cellular orga... 54 3e-05
UniRef50_A5DUM9 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-04
UniRef50_Q8NKN7 Cluster: DNA polymerase; n=1; uncultured crenarc... 52 1e-04
UniRef50_Q5UQR0 Cluster: DNA polymerase (EC 2.7.7.7) [Contains: ... 52 1e-04
UniRef50_Q3ZMC0 Cluster: DNA polymerase; n=1; Crocidura russula ... 52 1e-04
UniRef50_A7U6F1 Cluster: Putative B family DNA polymerase I; n=1... 52 2e-04
UniRef50_Q8D8C5 Cluster: DNA polymerase; n=9; Gammaproteobacteri... 52 2e-04
UniRef50_Q1DBV1 Cluster: DNA polymerase; n=3; Bacteria|Rep: DNA ... 51 2e-04
UniRef50_A0KYI7 Cluster: DNA polymerase; n=17; Shewanella|Rep: D... 51 3e-04
UniRef50_A7I7B5 Cluster: DNA polymerase B region; n=1; Candidatu... 50 5e-04
UniRef50_UPI00006D00EC Cluster: hypothetical protein TTHERM_0082... 50 7e-04
UniRef50_Q8KA84 Cluster: DNA polymerase family B protein; n=11; ... 49 0.001
UniRef50_A4BE79 Cluster: DNA polymerase; n=1; Reinekea sp. MED29... 49 0.001
UniRef50_O74046 Cluster: Archael family B DNA polymerase; n=8; C... 48 0.002
UniRef50_P95979 Cluster: DNA polymerase 3; n=4; Sulfolobus|Rep: ... 48 0.002
UniRef50_UPI0000035EE6 Cluster: UPI0000035EE6 related cluster; n... 48 0.002
UniRef50_A2ERL6 Cluster: Viral A-type inclusion protein, putativ... 48 0.002
UniRef50_A7D4V7 Cluster: DNA polymerase B region; n=1; Halorubru... 48 0.002
UniRef50_A6N4C5 Cluster: DNA-dependent DNA polymerase; n=1; Tham... 48 0.003
UniRef50_Q54G05 Cluster: Putative uncharacterized protein; n=1; ... 48 0.003
UniRef50_UPI0000F1FBE9 Cluster: PREDICTED: similar to erythrocyt... 47 0.005
UniRef50_A3DMW2 Cluster: DNA polymerase; n=1; Staphylothermus ma... 47 0.005
UniRef50_A7U6F3 Cluster: Putative B family DNA polymerase I; n=1... 46 0.007
UniRef50_Q5MY93 Cluster: Rhoptry associated membrane antigen; n=... 46 0.007
UniRef50_O93745 Cluster: DNA polymerase 1; n=1; Aeropyrum pernix... 46 0.007
UniRef50_P21402 Cluster: DNA polymerase; n=4; Avipoxvirus|Rep: D... 46 0.009
UniRef50_Q1ZD43 Cluster: DNA polymerase; n=2; Psychromonas|Rep: ... 46 0.012
UniRef50_Q0TN00 Cluster: Putative uncharacterized protein; n=1; ... 45 0.020
UniRef50_A6VXF3 Cluster: DNA polymerase; n=2; Marinomonas|Rep: D... 45 0.020
UniRef50_Q2FPC2 Cluster: DNA polymerase; n=3; Methanomicrobiales... 45 0.020
UniRef50_UPI00006CCC45 Cluster: hypothetical protein TTHERM_0033... 44 0.035
UniRef50_Q9U0K4 Cluster: Putative uncharacterized protein PFD040... 44 0.035
UniRef50_Q8I2E0 Cluster: Putative uncharacterized protein PFA066... 44 0.035
UniRef50_Q54DV1 Cluster: Putative uncharacterized protein; n=1; ... 44 0.035
UniRef50_Q9QSK2 Cluster: DNA polymerase; n=2; Invertebrate iride... 44 0.046
UniRef50_Q8I240 Cluster: Putative uncharacterized protein PFA051... 44 0.046
UniRef50_Q4UFA2 Cluster: CPSF (Cleavage and polyadenylation spec... 44 0.046
UniRef50_Q23CZ4 Cluster: Putative uncharacterized protein; n=2; ... 44 0.046
UniRef50_Q8IJ43 Cluster: Putative uncharacterized protein; n=1; ... 43 0.061
UniRef50_Q55BQ5 Cluster: Putative uncharacterized protein; n=1; ... 43 0.061
UniRef50_Q3ISP1 Cluster: DNA polymerase; n=1; Natronomonas phara... 43 0.061
UniRef50_A2YJD2 Cluster: Putative uncharacterized protein; n=2; ... 43 0.081
UniRef50_Q22AM9 Cluster: XPG I-region family protein; n=1; Tetra... 43 0.081
UniRef50_Q0W1G8 Cluster: Putative DNA-directed DNA polymerase B;... 43 0.081
UniRef50_Q8IBL5 Cluster: Putative uncharacterized protein PF07_0... 42 0.11
UniRef50_A2FCV0 Cluster: Fimbriae-associated protein, putative; ... 42 0.11
UniRef50_UPI0000E48F28 Cluster: PREDICTED: hypothetical protein;... 42 0.14
UniRef50_A2FGT6 Cluster: Putative uncharacterized protein; n=1; ... 42 0.14
UniRef50_UPI0000D8E0D3 Cluster: UPI0000D8E0D3 related cluster; n... 42 0.19
UniRef50_A5D6T7 Cluster: Si:dkey-204a24.2 protein; n=5; Danio re... 42 0.19
UniRef50_Q3IIU6 Cluster: DNA polymerase II; n=4; Alteromonadales... 42 0.19
UniRef50_Q7P5M3 Cluster: DNA mismatch repair protein mutL; n=3; ... 42 0.19
UniRef50_Q2BIJ7 Cluster: DNA polymerase; n=1; Neptuniibacter cae... 42 0.19
UniRef50_Q8I631 Cluster: Putative uncharacterized protein; n=1; ... 42 0.19
UniRef50_Q8I406 Cluster: Phosphatidylinositol 4-kinase, putative... 42 0.19
UniRef50_Q55DW9 Cluster: Putative uncharacterized protein; n=1; ... 42 0.19
UniRef50_Q5A1Z3 Cluster: Putative uncharacterized protein; n=2; ... 42 0.19
UniRef50_Q2SLR0 Cluster: DNA polymerase II; n=1; Hahella chejuen... 41 0.25
UniRef50_Q6R2C0 Cluster: SOS inducible DNA polymerase; n=2; Esch... 41 0.25
UniRef50_Q4Z067 Cluster: BIR protein, putative; n=3; Plasmodium ... 41 0.25
UniRef50_Q24GP7 Cluster: Putative uncharacterized protein; n=2; ... 41 0.25
UniRef50_Q24BX8 Cluster: SMC family, C-terminal domain containin... 41 0.25
UniRef50_Q23E20 Cluster: Putative uncharacterized protein; n=1; ... 41 0.25
UniRef50_A2E434 Cluster: Putative uncharacterized protein; n=2; ... 41 0.25
UniRef50_A0YZI8 Cluster: CheA Signal Transduction Histidine Kina... 41 0.33
UniRef50_Q9M9B8 Cluster: F27J15.5; n=4; core eudicotyledons|Rep:... 41 0.33
UniRef50_Q8I3N9 Cluster: Putative uncharacterized protein PFE112... 41 0.33
UniRef50_Q54PU3 Cluster: Putative uncharacterized protein; n=1; ... 41 0.33
UniRef50_A2EQJ1 Cluster: Putative uncharacterized protein; n=1; ... 41 0.33
UniRef50_Q93M88 Cluster: Putative uncharacterized protein PCP59;... 40 0.43
UniRef50_Q31FJ6 Cluster: Aminopeptidase N; n=1; Thiomicrospira c... 40 0.43
UniRef50_Q2SR11 Cluster: Membrane protein, putative; n=3; Mycopl... 40 0.43
UniRef50_Q2S127 Cluster: DNA polymerase; n=1; Salinibacter ruber... 40 0.43
UniRef50_Q8IJM3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.43
UniRef50_Q8IIS9 Cluster: Putative uncharacterized protein; n=3; ... 40 0.43
UniRef50_Q6LFD0 Cluster: Putative myosin-like protein; n=2; cell... 40 0.43
UniRef50_Q5CS49 Cluster: G patch domain containing protein; n=2;... 40 0.43
UniRef50_A2EN31 Cluster: Viral A-type inclusion protein, putativ... 40 0.43
UniRef50_A0E422 Cluster: Chromosome undetermined scaffold_77, wh... 40 0.43
UniRef50_Q4T3R0 Cluster: Chromosome undetermined SCAF9938, whole... 40 0.57
UniRef50_A5MZN2 Cluster: Putative uncharacterized protein; n=1; ... 40 0.57
UniRef50_A0L7M2 Cluster: NAD-glutamate dehydrogenase; n=1; Magne... 40 0.57
UniRef50_Q4YBL9 Cluster: Putative uncharacterized protein; n=5; ... 40 0.57
UniRef50_Q22SE4 Cluster: Tesmin/TSO1-like CXC domain containing ... 40 0.57
UniRef50_Q5AL15 Cluster: Putative uncharacterized protein; n=1; ... 40 0.57
UniRef50_UPI00006CFCE3 Cluster: hypothetical protein TTHERM_0060... 40 0.76
UniRef50_Q2SS84 Cluster: Membrane protein, putative; n=2; Mycopl... 40 0.76
UniRef50_Q8IHR5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.76
UniRef50_Q4YXS7 Cluster: Erythrocyte membrane protein 3, putativ... 40 0.76
UniRef50_Q24BA9 Cluster: Putative uncharacterized protein; n=1; ... 40 0.76
UniRef50_Q23KB7 Cluster: Cyclic nucleotide-binding domain contai... 40 0.76
UniRef50_Q238V3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.76
UniRef50_Q84173 Cluster: DNA polymerase; n=71; Poxviridae|Rep: D... 40 0.76
UniRef50_Q070J2 Cluster: DNA polymerase; n=1; Crocodilepox virus... 39 1.0
UniRef50_A6F775 Cluster: DNA polymerase II; n=1; Moritella sp. P... 39 1.0
UniRef50_Q22CX2 Cluster: Response regulator receiver domain cont... 39 1.0
UniRef50_A3R6T6 Cluster: Erythrocyte membrane protein 1; n=13; P... 39 1.0
UniRef50_A2F6L9 Cluster: Putative uncharacterized protein; n=1; ... 39 1.0
UniRef50_A2EJ44 Cluster: Viral A-type inclusion protein, putativ... 39 1.0
UniRef50_A0D8X6 Cluster: Chromosome undetermined scaffold_41, wh... 39 1.0
UniRef50_A0CEG2 Cluster: Chromosome undetermined scaffold_171, w... 39 1.0
UniRef50_Q6FWE0 Cluster: Candida glabrata strain CBS138 chromoso... 39 1.0
UniRef50_A5DRM0 Cluster: Putative uncharacterized protein; n=1; ... 39 1.0
UniRef50_Q9HKZ3 Cluster: DNA polymerase (PolB) related protein; ... 39 1.0
UniRef50_Q3IQ99 Cluster: Transducer protein htr31; n=1; Natronom... 39 1.0
UniRef50_UPI00015B5D76 Cluster: PREDICTED: similar to CG18255-PA... 39 1.3
UniRef50_UPI00006CD176 Cluster: hypothetical protein TTHERM_0012... 39 1.3
UniRef50_Q8IIP2 Cluster: Putative uncharacterized protein; n=1; ... 39 1.3
UniRef50_Q8IDP2 Cluster: Putative uncharacterized protein MAL13P... 39 1.3
UniRef50_Q7RGR0 Cluster: Asparagine-rich protein, putative; n=3;... 39 1.3
UniRef50_Q23K38 Cluster: Cyclic nucleotide-binding domain contai... 39 1.3
UniRef50_Q7RNC6 Cluster: KED, putative; n=3; Plasmodium (Vinckei... 38 1.7
UniRef50_Q7RK50 Cluster: Putative uncharacterized protein PY0305... 38 1.7
UniRef50_Q7KWN1 Cluster: Similar to Dictyostelium discoideum (Sl... 38 1.7
UniRef50_Q4XZZ2 Cluster: Putative uncharacterized protein; n=2; ... 38 1.7
UniRef50_Q4XV56 Cluster: Putative uncharacterized protein; n=1; ... 38 1.7
UniRef50_A2FVB6 Cluster: Putative uncharacterized protein; n=2; ... 38 1.7
UniRef50_A2FLH3 Cluster: Putative uncharacterized protein; n=1; ... 38 1.7
UniRef50_A2FD36 Cluster: Viral A-type inclusion protein, putativ... 38 1.7
UniRef50_UPI00015B5AC7 Cluster: PREDICTED: hypothetical protein;... 38 2.3
UniRef50_UPI00015B5285 Cluster: PREDICTED: similar to conserved ... 38 2.3
UniRef50_UPI00006CD141 Cluster: hypothetical protein TTHERM_0012... 38 2.3
UniRef50_UPI00006CB152 Cluster: hypothetical protein TTHERM_0029... 38 2.3
UniRef50_Q9DVU0 Cluster: DNA polymerase; n=1; Plutella xylostell... 38 2.3
UniRef50_Q8EVB9 Cluster: DNA topoisomerase IV subunit A; n=12; B... 38 2.3
UniRef50_Q8IJV9 Cluster: Putative uncharacterized protein; n=1; ... 38 2.3
UniRef50_Q8IEI2 Cluster: Putative uncharacterized protein MAL13P... 38 2.3
UniRef50_Q7RD60 Cluster: Putative uncharacterized protein PY0556... 38 2.3
UniRef50_Q7PDU3 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=... 38 2.3
UniRef50_Q558U1 Cluster: Eukaryotic translation initiation facto... 38 2.3
UniRef50_Q54KG8 Cluster: Putative uncharacterized protein; n=2; ... 38 2.3
UniRef50_Q4XZZ3 Cluster: Putative uncharacterized protein; n=2; ... 38 2.3
UniRef50_A2EVM3 Cluster: Viral A-type inclusion protein, putativ... 38 2.3
UniRef50_A2DDD0 Cluster: Putative uncharacterized protein; n=1; ... 38 2.3
UniRef50_A0BXF4 Cluster: Chromosome undetermined scaffold_134, w... 38 2.3
UniRef50_Q6CPI3 Cluster: Similar to sp|P53276 Saccharomyces cere... 38 2.3
UniRef50_Q46G94 Cluster: Putative uncharacterized protein; n=1; ... 38 2.3
UniRef50_UPI00006CFA35 Cluster: TPR Domain containing protein; n... 38 3.1
UniRef50_Q6JPF1 Cluster: DNA polymerase; n=3; Nucleopolyhedrovir... 38 3.1
UniRef50_Q5M3F7 Cluster: Polysaccharide biosynthesis protein/put... 38 3.1
UniRef50_Q8II32 Cluster: Putative uncharacterized protein; n=3; ... 38 3.1
UniRef50_Q7YX81 Cluster: Putative uncharacterized protein; n=1; ... 38 3.1
UniRef50_Q4X2X5 Cluster: Putative uncharacterized protein; n=2; ... 38 3.1
UniRef50_Q4UCJ8 Cluster: Putative uncharacterized protein; n=1; ... 38 3.1
UniRef50_Q248G7 Cluster: Protein kinase domain containing protei... 38 3.1
UniRef50_Q16GC5 Cluster: Putative uncharacterized protein; n=1; ... 38 3.1
UniRef50_A2EYA1 Cluster: Viral A-type inclusion protein, putativ... 38 3.1
UniRef50_A2EDE6 Cluster: Putative uncharacterized protein; n=1; ... 38 3.1
UniRef50_UPI00015ADF82 Cluster: hypothetical protein NEMVEDRAFT_... 37 4.0
UniRef50_UPI00006CD140 Cluster: Viral A-type inclusion protein r... 37 4.0
UniRef50_Q4HQJ8 Cluster: Poly E-rich protein, putative; n=1; Cam... 37 4.0
UniRef50_Q03FJ2 Cluster: Putative uncharacterized protein; n=1; ... 37 4.0
UniRef50_A0J2X3 Cluster: Putative membrane protein precursor; n=... 37 4.0
UniRef50_Q8ILR9 Cluster: Putative uncharacterized protein; n=1; ... 37 4.0
UniRef50_Q8IJL1 Cluster: Putative uncharacterized protein; n=2; ... 37 4.0
UniRef50_Q8IE35 Cluster: Putative uncharacterized protein PF13_0... 37 4.0
UniRef50_Q7RRF7 Cluster: Chloroquine resistance marker protein, ... 37 4.0
UniRef50_Q7RRE3 Cluster: Putative uncharacterized protein PY0078... 37 4.0
UniRef50_Q7R8V7 Cluster: Putative uncharacterized protein PY0711... 37 4.0
UniRef50_Q6BGF8 Cluster: UNC51-like kinase, putative; n=2; Param... 37 4.0
UniRef50_Q54HD2 Cluster: Putative uncharacterized protein ndrD; ... 37 4.0
UniRef50_Q4YX75 Cluster: BIR protein, putative; n=1; Plasmodium ... 37 4.0
UniRef50_Q24FV1 Cluster: Putative uncharacterized protein; n=1; ... 37 4.0
UniRef50_Q24D16 Cluster: Variant SH3 domain containing protein; ... 37 4.0
UniRef50_Q245C5 Cluster: Putative uncharacterized protein; n=1; ... 37 4.0
UniRef50_Q23MM5 Cluster: Putative uncharacterized protein; n=2; ... 37 4.0
UniRef50_A0CPG2 Cluster: Chromosome undetermined scaffold_23, wh... 37 4.0
UniRef50_Q1E8M1 Cluster: Peptidyl-prolyl cis-trans isomerase; n=... 37 4.0
UniRef50_A7TR87 Cluster: Putative uncharacterized protein; n=1; ... 37 4.0
UniRef50_A7TGL3 Cluster: Putative uncharacterized protein; n=1; ... 37 4.0
UniRef50_UPI0000D56388 Cluster: PREDICTED: similar to schwannomi... 37 5.3
UniRef50_UPI00006CCC63 Cluster: hypothetical protein TTHERM_0033... 37 5.3
UniRef50_Q8IIW9 Cluster: Putative uncharacterized protein; n=1; ... 37 5.3
UniRef50_Q8IE18 Cluster: Putative uncharacterized protein Phat11... 37 5.3
UniRef50_Q8I235 Cluster: Kinesin, putative; n=2; Plasmodium|Rep:... 37 5.3
UniRef50_Q54V85 Cluster: Putative uncharacterized protein; n=1; ... 37 5.3
UniRef50_Q23KK4 Cluster: Von Willebrand factor type A domain con... 37 5.3
UniRef50_A2FMK4 Cluster: Putative uncharacterized protein; n=1; ... 37 5.3
UniRef50_A2DLG0 Cluster: Viral A-type inclusion protein, putativ... 37 5.3
UniRef50_A0E2I3 Cluster: Chromosome undetermined scaffold_75, wh... 37 5.3
UniRef50_A0CXR3 Cluster: Chromosome undetermined scaffold_30, wh... 37 5.3
UniRef50_Q6BP24 Cluster: Similarity; n=1; Debaryomyces hansenii|... 37 5.3
UniRef50_A5DXZ2 Cluster: Putative uncharacterized protein; n=1; ... 37 5.3
UniRef50_A5DX94 Cluster: Predicted protein; n=1; Lodderomyces el... 37 5.3
UniRef50_UPI0000D56185 Cluster: PREDICTED: similar to CG17492-PA... 36 7.1
UniRef50_UPI00006CA9E0 Cluster: cyclic nucleotide-binding domain... 36 7.1
UniRef50_Q4EB30 Cluster: Putative uncharacterized protein; n=1; ... 36 7.1
UniRef50_Q1GSS7 Cluster: Putative uncharacterized protein; n=1; ... 36 7.1
UniRef50_A5TW64 Cluster: DNA-directed DNA polymerase I; n=4; Fus... 36 7.1
UniRef50_Q9VU57 Cluster: CG17687-PA; n=3; Sophophora|Rep: CG1768... 36 7.1
UniRef50_Q8IKR9 Cluster: Putative uncharacterized protein; n=1; ... 36 7.1
UniRef50_Q8IKM1 Cluster: Putative uncharacterized protein; n=1; ... 36 7.1
UniRef50_Q8IBT9 Cluster: Putative uncharacterized protein PF07_0... 36 7.1
UniRef50_Q8I4Q8 Cluster: Putative uncharacterized protein; n=1; ... 36 7.1
UniRef50_Q7PDL3 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=... 36 7.1
UniRef50_Q55D99 Cluster: P21-activated protein kinase; n=3; Dict... 36 7.1
UniRef50_Q556I3 Cluster: Putative uncharacterized protein; n=2; ... 36 7.1
UniRef50_Q54I14 Cluster: Putative uncharacterized protein; n=1; ... 36 7.1
UniRef50_Q54BP1 Cluster: Putative uncharacterized protein; n=1; ... 36 7.1
UniRef50_Q4YQQ2 Cluster: Putative uncharacterized protein; n=1; ... 36 7.1
UniRef50_Q4Y8M2 Cluster: Putative uncharacterized protein; n=1; ... 36 7.1
UniRef50_Q22CU0 Cluster: Zinc finger, C2H2 type family protein; ... 36 7.1
UniRef50_O60991 Cluster: Erythrocyte membrane protein 1; n=5; Pl... 36 7.1
UniRef50_A2FN20 Cluster: Cell-surface adhesin, putative; n=1; Tr... 36 7.1
UniRef50_A2FDG3 Cluster: Putative uncharacterized protein; n=1; ... 36 7.1
UniRef50_A0E4S1 Cluster: Chromosome undetermined scaffold_79, wh... 36 7.1
UniRef50_A0DDC4 Cluster: Chromosome undetermined scaffold_46, wh... 36 7.1
UniRef50_Q5A4P5 Cluster: Potential vacuolar protein sorting prot... 36 7.1
UniRef50_A4RF63 Cluster: Putative uncharacterized protein; n=1; ... 36 7.1
UniRef50_UPI0000D56108 Cluster: PREDICTED: similar to CG18304-PA... 36 9.3
UniRef50_Q600Y2 Cluster: Putative uncharacterized protein; n=5; ... 36 9.3
UniRef50_Q5WDG3 Cluster: Metalloendopeptidase; n=1; Bacillus cla... 36 9.3
UniRef50_Q1N131 Cluster: DNA polymerase; n=1; Oceanobacter sp. R... 36 9.3
UniRef50_Q180D5 Cluster: Putative exported protein; n=2; Clostri... 36 9.3
UniRef50_Q0QZ52 Cluster: DNA polymerase; n=5; root|Rep: DNA poly... 36 9.3
UniRef50_Q8IK20 Cluster: Putative uncharacterized protein; n=1; ... 36 9.3
UniRef50_Q8IJB9 Cluster: Putative uncharacterized protein; n=2; ... 36 9.3
UniRef50_Q7RT06 Cluster: Putative uncharacterized protein PY0019... 36 9.3
UniRef50_Q7RKA8 Cluster: Putative uncharacterized protein PY0299... 36 9.3
UniRef50_Q7RHR7 Cluster: Retinitis pigmentosa GTPase regulator-l... 36 9.3
UniRef50_Q7REP0 Cluster: Putative uncharacterized protein PY0502... 36 9.3
UniRef50_Q7R8E0 Cluster: Sushi domain, putative; n=6; Plasmodium... 36 9.3
UniRef50_Q4Y1R4 Cluster: Putative uncharacterized protein; n=4; ... 36 9.3
UniRef50_Q23JL5 Cluster: Putative uncharacterized protein; n=1; ... 36 9.3
UniRef50_A2E8Z5 Cluster: Viral A-type inclusion protein, putativ... 36 9.3
UniRef50_A2DHY8 Cluster: Putative uncharacterized protein; n=1; ... 36 9.3
UniRef50_A2D7I6 Cluster: Putative uncharacterized protein; n=1; ... 36 9.3
UniRef50_A0CHU3 Cluster: Chromosome undetermined scaffold_184, w... 36 9.3
UniRef50_Q0UXD0 Cluster: Putative uncharacterized protein; n=1; ... 36 9.3
UniRef50_A4VB71 Cluster: Polyprotein; n=13; Vanderwaltozyma poly... 36 9.3
UniRef50_Q9HRV9 Cluster: DNA polymerase; n=1; Halobacterium sali... 36 9.3
UniRef50_Q22918 Cluster: Eukaryotic translation initiation facto... 36 9.3
>UniRef50_Q16UP4 Cluster: DNA polymerase; n=1; Aedes aegypti|Rep: DNA
polymerase - Aedes aegypti (Yellowfever mosquito)
Length = 2080
Score = 751 bits (1856), Expect = 0.0
Identities = 385/826 (46%), Positives = 534/826 (64%), Gaps = 39/826 (4%)
Query: 806 NNSQALGLNEDEINSSIVSIENCESADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSV 865
NN+ +N + + + + CE +FLT M +EVH RG++ P+P +DPI A+FY +
Sbjct: 1215 NNTYGFKVNYENLQKAKAT---CEY-NFLTIMSVEVHIQTRGELRPNPEIDPISAIFYRI 1270
Query: 866 INDCPNNHFLKKSLTGIIV--------VDSSSRKYLDGCVFNVPVIYVSNEIETIDEVIK 917
ND P +H S+ GII+ D + C + V+ VSNE E ++ +
Sbjct: 1271 HNDVPEDHRRAPSVCGIILNHEHGLAATDRLDPYKYNKCNYMADVVTVSNERELYEKFLM 1330
Query: 918 LVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRI--------TEKNRQKRWMK 969
L++ DPDI GYEIE SWGY+++R L ++++K LSR+ +E+ Q+
Sbjct: 1331 LISFWDPDIFAGYEIEQASWGYIIQRGYSLEMNLMKMLSRVPTAEKVHVSEEEEQELLEM 1390
Query: 970 NESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDES 1029
+E +I GR++ ++WRL RHE+AL+SY+FEN ++ +L+ RV +++ QL+ W
Sbjct: 1391 HEYSAGLKIPGRILLDIWRLMRHEIALTSYTFENIVFHILHRRVSCHAFKQLTRLW--NK 1448
Query: 1030 KMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLR 1089
+WI +EYYL +++G + +L +LD+I RT+ELA+LFG+Q++EVLSRGSQFRVES+MLR
Sbjct: 1449 PYSKWIVLEYYLERVNGNLELLHQLDLIGRTAELAKLFGIQFYEVLSRGSQFRVESMMLR 1508
Query: 1090 AARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYC 1149
A+P N +++SP+I+QR+ MRAPE LPLI EPESRFY+DP+IVLDFQSLYPSM+IAYNYC
Sbjct: 1509 IAKPRNFVSVSPSIQQRAHMRAPEYLPLILEPESRFYADPLIVLDFQSLYPSMIIAYNYC 1568
Query: 1150 FSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLP 1209
FSTC+GRV+++ +EFGA LR+ L+ LV+ +LI SP GI FVK+SVR G+LP
Sbjct: 1569 FSTCLGRVEHLGQSEPFEFGASHLRLSPRMLKVLVEKNLITISPCGIAFVKSSVREGILP 1628
Query: 1210 XXXXXXXXXXQAVKKSMKMQNDEAV-KKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVE 1268
VK SMK+ + ++ ++ +HSRQLGLKLIANVTYGYTAANFSGRMPCVE
Sbjct: 1629 RMLNEILTTRLMVKGSMKLHKENSILQRVLHSRQLGLKLIANVTYGYTAANFSGRMPCVE 1688
Query: 1269 VADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADA 1328
V DSVV+KGRETLERAIK+V + W AKV+YGDTDS+FVL PGR++ +AF+IG +IADA
Sbjct: 1689 VGDSVVSKGRETLERAIKMVETSERWGAKVVYGDTDSLFVLCPGRTKEQAFKIGAEIADA 1748
Query: 1329 VTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGV 1388
VT DNPPPV LKLEKVYQP ILQTKKRYVG+M+E+PDQEKP YEAKGIETVRRDGCP
Sbjct: 1749 VTKDNPPPVKLKLEKVYQPSILQTKKRYVGYMYETPDQEKPVYEAKGIETVRRDGCPVVS 1808
Query: 1389 KLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPP 1448
K+L + L LF D+S VK S++ E + + + + +E+ G+ GY+PGA P
Sbjct: 1809 KMLEKVLRILFETRDVSKVKEYTCRQFSKILEGRVNLQDFIYAKEFRGEDGYKPGACVPA 1868
Query: 1449 NEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYAT 1508
E+ +R + D R PR G RV +++ G P VPL+RL R+P EL D L+ + YY
Sbjct: 1869 LELTRRWKVVDPRREPRRGQRVPYVIINGPPLVPLIRLVRSPDELLADNGLKINSNYYIG 1928
Query: 1509 RVXXXXXXXXXXXXGVDVFKWWNEL----------GYNRT--AQQREQTQSGGIEKYMSR 1556
+ G DV +W+N++ G R+ A + + + I +Y S
Sbjct: 1929 KAIIPPLNRCLLLIGADVNQWYNDMPRKYQLLHNTGGKRSSLASELQLPKKSTISQYFST 1988
Query: 1557 ERC-AVCGVRTIVRSAVCPQC-AHTQRACVVLQTRANNAATYLDSC 1600
C CG ++ S VC +C QR + + N ++ C
Sbjct: 1989 TSCIGDCGNQS--HSGVCTECRKRPQRTVTYVMDKINRLERRVELC 2032
Score = 250 bits (613), Expect = 2e-64
Identities = 149/409 (36%), Positives = 230/409 (56%), Gaps = 40/409 (9%)
Query: 1 MTKPTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPE- 59
M KP D YSEFRG+++KQVPV+R+FG DG +C+HIHGVFPY Y+P +
Sbjct: 21 MHKPEPRFDTCYSEFRGSNVKQVPVIRLFGSTADGTHSCVHIHGVFPYLYVPFDGNTADR 80
Query: 60 ---PQLLYQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYR 116
+L+YQIA+SLDKA+N+++ A S+ HV++I+LVKG+P YGYH KEH + K+++Y
Sbjct: 81 TAVDRLMYQIASSLDKAINVSLGNANSAATHVFRIALVKGIPIYGYHRKEHQFFKIYMYN 140
Query: 117 PGLIKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFRKSGFSQ 176
P LI++A L +G IL + FQ ESH+ + LQFFID+NL+GMS +D+ R
Sbjct: 141 PYLIRKANNLLMNGVILSRVFQTFESHVPYILQFFIDYNLYGMSLLDVLESAIRP---RT 197
Query: 177 KSNEVLYDTKENTLTSESSCHYEADCMASHIINRQRI--GKGDGIENPGLEEVWNQELER 234
++ E E L S+ YE D +A I+NR + K NPG+ +WN E+ R
Sbjct: 198 ETGE------EGHLQKMSTSEYEIDILAGDILNRHTLEQEKRSEYANPGIASIWNDEIAR 251
Query: 235 RKQLNMSLASKSLSQGLTSLKQVETDSHYKFENIFAVKL--SNKIDKPVLLEH------- 285
RK L M ++LS + ++ T+S F ++ A KL SN ++PV E
Sbjct: 252 RKLLGME-QPEALSLSQSGKVEIVTESDRFFRSVLASKLTGSNNANRPVEGEETRLKPPV 310
Query: 286 AYYPAETLGDTQLFKAVDVSIHLPSKDLDLTLNRTTKMNLNEHEEEDLDTTIVDENLVLN 345
++YP+E D +L +A V H ++ + N++ + D D + VDE+ +++
Sbjct: 311 SFYPSEVADDERLLEASCVQDH-------KHFSQYSSFNMS-NTVYDFDGSQVDEDRIVS 362
Query: 346 SSMSLQYSQVLLNSEDMELIDMLHDMDQQR---VEEDSIMGTPANRDQE 391
S Q ED +L+D++ ++++ VE DS++ P + E
Sbjct: 363 MS---QNPDATFAEEDHQLLDIMRELEEHENRDVENDSLL-APLTQQNE 407
Score = 61.7 bits (143), Expect = 2e-07
Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 21/275 (7%)
Query: 542 IVKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNNELELSPDGNELGIVSF-YD 600
++ +++SE+ +LQ K + ++ E+ + S+ E S + L I +
Sbjct: 820 LITALSQSEVTNLQVKKADPTSMETIEISSES-EVIHISDEESRSSGEQKRLSIPEISQE 878
Query: 601 ASKVFDDSFNQTFLQEQTNCDDCSDI-IANEYEKQEDYDKFKDTELKLDVSVNEK-LDTG 658
A++V + S T + + + D+ I + YE +D F + D S+ E D
Sbjct: 879 AAQVANRSPISTKAMTEDDEGEDEDLNIKSFYEHTLVFDDFDELGSGSDGSMMELGCDNH 938
Query: 659 IKIFTPTV-----KPPTKNEMET---KYKIPKTKQVQPFFSDYKDVGDKVEIGQLVLKLH 710
++ T + KPP+ + ++ IP+ +PF+S+ DV + E+G +VL +
Sbjct: 939 VEDDTKVISTLQEKPPSMADALKAIQEFTIPQVIHQEPFYSNPVDVTGRKEVGHIVLNIG 998
Query: 711 SNLSRDQKPFEKVL-ETESIENWRQLLFLQKYATQ------DDYKPDT--LRTLLAGNSR 761
N D + F V+ + SI N+R Y D +PD +R LLA
Sbjct: 999 GNSLNDMEEFHSVVSDMNSINNFRHKKLSAIYGDSLSAILGDSSRPDAGKMRELLATEQS 1058
Query: 762 YVIQPVVRPPTSEQVKKWINEQKALQLLSQFSSEQ 796
++ P +PP+ + K W+ + ++ EQ
Sbjct: 1059 VIVVPAAKPPSKHEAKVWLKAMEKIKTEEAVPVEQ 1093
>UniRef50_Q9GSR1 Cluster: DNA polymerase; n=4; Sophophora|Rep: DNA
polymerase - Drosophila melanogaster (Fruit fly)
Length = 2130
Score = 733 bits (1811), Expect = 0.0
Identities = 381/845 (45%), Positives = 541/845 (64%), Gaps = 32/845 (3%)
Query: 770 PPTSEQVKKWINEQKALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSSI---VSIE 826
PP+S+ ++ ++ A L + S + + + D + + GL+ ++++ V++E
Sbjct: 1227 PPSSQSSEQSVSSSAAQAELDRSSFLRQLEGSSQDRQHDLSFGLSHATLDNTFGFKVNLE 1286
Query: 827 NCESA------DFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLT 880
N + A + LT + +EV S RGD+ PDP D I+ +FY++ + P+ K+
Sbjct: 1287 NLQQAKADIDCNHLTIITLEVFVSTRGDLQPDPMHDEIRCLFYAIEHSLPDEKLPSKACG 1346
Query: 881 GIIV---VDSSSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSW 937
I+V D S G ++ V V++E E + ++ L D DI GYEIEM+SW
Sbjct: 1347 YIMVNTVQDLLSEGPFHGIDRDIEVQVVTSEAEAFEALLALCERWDADIYAGYEIEMSSW 1406
Query: 938 GYVLERAEILGLDVLKDLSRI-TEKNR----QKRWMKNESDYEGRIIGRVIFNVWRLFRH 992
GYV++RA+ L ++ LSR+ T+K R + R + D E ++ GR++ +VWRL R
Sbjct: 1407 GYVIDRAKHLCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGRILLDVWRLMRS 1466
Query: 993 ELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQ 1052
E+AL+SY+FEN MY +L++R P ++ L++W+ S RWI +EYYL ++ GT+ +L
Sbjct: 1467 EIALTSYTFENVMYHILHKRCPWHTAKSLTEWF--GSPCTRWIVMEYYLERVRGTLTLLD 1524
Query: 1053 KLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAP 1112
+LD++ RTSE+A+L G+Q++EVLSRGSQFRVES+MLR A+P NL+ LSP+++ R+ MRAP
Sbjct: 1525 QLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQARAHMRAP 1584
Query: 1113 ETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWR 1172
E L LI EP+SRFY+DP+IVLDFQSLYPSM+IAYNYCFSTC+GRV+++ G + +EFGA +
Sbjct: 1585 EYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQ 1644
Query: 1173 LRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDE 1232
LR+ R L+ L+++ L+ SP G+ FVK VR G+LP Q VK+SMK+ D
Sbjct: 1645 LRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHKDS 1704
Query: 1233 -AVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVREN 1291
A+++ +HSRQLGLKL+ANVTYGYTAANFSGRMP VEV DSVV+KGRETLERAIKLV N
Sbjct: 1705 SALQRILHSRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSVVSKGRETLERAIKLVENN 1764
Query: 1292 TTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQ 1351
W +V+YGDTDSMFVLVPGR+R EAF IG++IA AVT NP PV LKLEKVYQPC+LQ
Sbjct: 1765 EEWKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAKAVTEMNPQPVKLKLEKVYQPCMLQ 1824
Query: 1352 TKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLV 1411
TKKRYVG+M+E+ DQE+P YEAKGIETVRRDGCPA K+L + L LF D+S +K V
Sbjct: 1825 TKKRYVGYMYETADQEQPVYEAKGIETVRRDGCPAVAKMLEKVLRILFETQDVSKIKAYV 1884
Query: 1412 KATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVS 1471
++L + +L F +E+ G GY+P A P E+ ++ KD R +PR G RV
Sbjct: 1885 CRQFTKLLSGRANLQDLIFAKEFRGLNGYKPTACVPALELTRKWMQKDPRHVPRRGERVP 1944
Query: 1472 WLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWN 1531
+++ G PG+ L+RL R+P ++ + + + YY T+ G +V W+
Sbjct: 1945 FIIVNGPPGMQLIRLVRSPHDILANEGHKINAIYYITKAIIPPLNRCLLLIGANVHDWFA 2004
Query: 1532 ELGYN-------RTAQQREQTQ--SGGIEKYMSRERCAV-CGVRTIVRSAVCPQCAHTQR 1581
L TA + + I +Y S C + CG +T ++ +CP C
Sbjct: 2005 SLPRKLLMTPAVGTANELAGARGAKSTISQYFSTTSCVIDCGRQT--KAGICPDCLKNAT 2062
Query: 1582 ACVVL 1586
CVV+
Sbjct: 2063 TCVVV 2067
Score = 223 bits (544), Expect = 4e-56
Identities = 147/460 (31%), Positives = 238/460 (51%), Gaps = 39/460 (8%)
Query: 1 MTKPTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEP 60
M KP G+D YSE RG +IK+VPV+R+FG G K C+H+HGVFPY YIP ++ E
Sbjct: 23 MEKPQFGMDPCYSELRGKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPYLYIPYDKKDFES 82
Query: 61 --QLLYQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPG 118
+ + Q+A LDKA+NI++ Q +S+ QHV+KI LVKG+PFYGYH EH +LK++++ P
Sbjct: 83 LERGILQMAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYHRVEHQFLKIYMFNPR 142
Query: 119 LIKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMS--DIDLQSVQFRKS---G 173
+++A L SGAIL + F PHESH+ + LQF ID+NL+GMS + L+ ++FR++
Sbjct: 143 FVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRNHDDD 202
Query: 174 FSQKSNEVLYDTKENTLTSESSCH-YEADCMASHIINR-QRIGKG-DGIENPGLEEVWNQ 230
+N + T + +C E D ++ I+NR Q + K NPG+E +WN
Sbjct: 203 VIPYANVKQAQLLDITTAKKVACSALEVDVSSNFILNRFQLVAKSKSNHTNPGIEAIWND 262
Query: 231 ELERRKQL---NMSLASKSLSQGLTSLKQVETDSHYKFE----NIF-AVKLSNKIDKPVL 282
E RR++L + + ++ + L+ T ++ E +IF L +K+ +
Sbjct: 263 EKLRRQKLVEKHTDAGDEEKAEAVPVLELPPTQERHQIEIAESDIFYRTALESKL---MT 319
Query: 283 LEHAYYPAETLGDTQLFKAVDVSIHLPSKDLDLTLNRTTKMNLN----EHEEEDLDTTIV 338
LE + +TL D + + +P K+ N E +D +V
Sbjct: 320 LEQSTLSEQTLSDQTILPQATMQTTMPGTKAQKRRFNLQKLLANAVYPEECSQDQQQLLV 379
Query: 339 DENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDSIMGTPANRD--------Q 390
+ + + N S V L++ D D+D+ V+E+ I+ +
Sbjct: 380 NASFIQNHVTCGYSSSVSLSTSK----DESDDLDETVVDEELILSLTQPHGAIPHDATLR 435
Query: 391 EVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSF 430
E D+EL DA ++ + + + +++ +PLS H F
Sbjct: 436 EEDLELLDA--LQLLEEQNESESHVDLDSSLAPLSQHKKF 473
Score = 58.8 bits (136), Expect = 1e-06
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 656 DTGIKIFTPTVKPPTKNEMET---KYKIPKTKQVQPFFSDYKDVGDKVEIGQLVLKLHSN 712
D+ + P PP+ +E+ + K IP+ + +P++S+ DV E+G LVL + N
Sbjct: 995 DSNSFVIAPLELPPSYDEVVSGSRKMDIPEYEFQKPYYSNPSDVSKVTEVGFLVLHIPGN 1054
Query: 713 LSRDQKPFEKVLETE-SIENW--RQLLFLQKYATQDDYKPD-TLRTLLAGNSRYVIQPVV 768
D PF+ +L + + +W RQL+ + A ++ + +R + R I+P
Sbjct: 1055 KLNDCDPFQSILGNDRGLASWRRRQLIAIGGLAMLQRHRGEQKVREYFSTQQRIAIEPAQ 1114
Query: 769 RPPTSEQVKKWINEQKALQLLSQFSSEQAISKNMD 803
PT ++ K W+ KA +LL Q + S ++D
Sbjct: 1115 LAPTWQEAKIWL---KAKELLRQREEPKKSSDDID 1146
>UniRef50_O60673 Cluster: DNA polymerase zeta catalytic subunit; n=39;
Euteleostomi|Rep: DNA polymerase zeta catalytic subunit -
Homo sapiens (Human)
Length = 3130
Score = 725 bits (1793), Expect = 0.0
Identities = 363/854 (42%), Positives = 543/854 (63%), Gaps = 35/854 (4%)
Query: 764 IQPVVRPPTSEQV--KKWINEQKALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSS 821
+ P+ P ++++ KK N ++L + Q + N SQ G + +
Sbjct: 2219 LSPLSTEPKTQKLSNKKGSNTDTLRRVLLTQAKNQFAAVNTPQKETSQIDGPSLNNTYGF 2278
Query: 822 IVSIENCESADFL------TSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFL 875
VSI+N + A L T + +E+H R D+ PDP DPI A+FY + +D P
Sbjct: 2279 KVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPICALFYCISSDTPLPDTE 2338
Query: 876 KKSLTGIIVVDSSSRKYLDGCVFNVPVI-----------YVSNEIETIDEVIKLVNIHDP 924
K LTG+IV+D + + P++ Y ++E E+ ++ +DP
Sbjct: 2339 KTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAADEKALFHEIANIIKRYDP 2398
Query: 925 DIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDY------EGRI 978
DI+ GYEI+M+SWGY+L+RA L +D+ + +SR+ + + R+ +Y E I
Sbjct: 2399 DILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVPDDKIENRFAAERDEYGSYTMSEINI 2458
Query: 979 IGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVE 1038
+GR+ N+WR+ R+E+AL++Y+FEN + VL++R P +++ LSDW+ +++ + RW V+
Sbjct: 2459 VGRITLNLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVD 2518
Query: 1039 YYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIA 1098
+Y++++ G ++ML++LD+I +TSE+ARLFG+Q+ VL+RGSQ+RVES+MLR A+P+N I
Sbjct: 2519 HYVSRVRGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIP 2578
Query: 1099 LSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQ 1158
++P+++QRS MRAP+ +PLI EPESRFYS+ V+VLDFQSLYPS++IAYNYCFSTC+G V+
Sbjct: 2579 VTPSVQQRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVE 2638
Query: 1159 NINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXX 1218
N+ ++FG LR+P L + + + SP G+ FVK SVR+GVLP
Sbjct: 2639 NLGKYDEFKFGCTSLRVPPDLLYQVRHDITV--SPNGVAFVKPSVRKGVLPRMLEEILKT 2696
Query: 1219 XQAVKKSMKM-QNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKG 1277
VK+SMK + D A+ + + +RQLGLKLIANVT+GYT+ANFSGRMPC+EV DS+V K
Sbjct: 2697 RFMVKQSMKAYKQDRALSRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKA 2756
Query: 1278 RETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPV 1337
RETLERAIKLV + W A+V+YGDTDSMFVL+ G ++ ++F+IGQ+IA+AVTA NP PV
Sbjct: 2757 RETLERAIKLVNDTKKWGARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPV 2816
Query: 1338 ALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCE 1397
LK EKVY PC+LQTKKRYVG+M+E+ DQ+ P ++AKGIETVRRD CPA K+L +SL
Sbjct: 2817 KLKFEKVYLPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKL 2876
Query: 1398 LFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGM 1457
LF D+S++K+ V+ +L E + + F +EY G Y+PGA P E+ +++
Sbjct: 2877 LFETRDISLIKQYVQRQCMKLLEGKASIQDFIFAKEYRGSFSYKPGACVPALELTRKMLT 2936
Query: 1458 KDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXX 1517
DRR+ P+ G RV +++ G PGVPL++L R P E+ +D +LR + YY T+
Sbjct: 2937 YDRRSEPQVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNATYYITKQILPPLAR 2996
Query: 1518 XXXXXGVDVFKWWNELG--YNRTAQQREQTQ--SGGIEKYMSRERCAVCGVRTIVRSAVC 1573
G+DVF W++EL + T+ R + + G I +Y + C VC + + +C
Sbjct: 2997 IFSLIGIDVFSWYHELPRIHKATSSSRSEPEGRKGTISQYFTTLHCPVCD--DLTQHGIC 3054
Query: 1574 PQC-AHTQRACVVL 1586
+C + Q V+L
Sbjct: 3055 SKCRSQPQHVAVIL 3068
Score = 213 bits (520), Expect = 3e-53
Identities = 118/314 (37%), Positives = 183/314 (58%), Gaps = 39/314 (12%)
Query: 1 MTKPTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEP 60
M P GLD S +K+VPV+R+FG G K CLH+HG+FPY Y+P +P
Sbjct: 13 MASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPYLYVPYDGYGQQP 72
Query: 61 Q-LLYQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGL 119
+ L Q+A S+D+ALN+A+ +S+ QHV+K+SLV G+PFYGYH+KE ++K++LY P +
Sbjct: 73 ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPTM 132
Query: 120 IKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFRKSGFSQKSN 179
+K+ EL SGAI+ + +QPHE+H+ + LQ FID+NL+GM+ I+L +V+FRK+ +KSN
Sbjct: 133 VKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFRKA--RRKSN 190
Query: 180 ------------------EVLYDTKENTLTS---------ESSCHYEADCMASHIINRQR 212
+ L+ +++ + S +S+C E D +A+ I+NR
Sbjct: 191 TLHATGSCKNHLSGNSLADTLFRWEQDEIPSSLILEGVEPQSTCELEVDAVAADILNRLD 250
Query: 213 IGKGDGIENPGLEEVWNQELERRKQLN-MSLASKSLSQGLTSLKQVETDSHYK------- 264
I G NPGL+ +W E +RR+ N S S+ SQ + E++ ++
Sbjct: 251 IEAQIG-GNPGLQAIWEDEKQRRRNRNETSQMSQPESQDHRFVPATESEKKFQKRLQEIL 309
Query: 265 FENIFAVKLSNKID 278
+N F+V LS +D
Sbjct: 310 KQNDFSVTLSGSVD 323
Score = 36.7 bits (81), Expect = 5.3
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 661 IFTPTVKPPTKNE-MET--KYKIPKTKQVQPFFSDYKDVGDKV-EIGQLVLKLHSNLSRD 716
I P + PP++ E M T + + +T +PF S+ DV +K EIG +L + + L+ D
Sbjct: 1877 ILKPLMSPPSREEIMATLLDHDLSETIYQEPFCSNPSDVPEKPREIGGRLLMVETRLAND 1936
Query: 717 QKPFEKVLETESIENWR 733
FE E + W+
Sbjct: 1937 LAEFEGDFSLEGLRLWK 1953
>UniRef50_UPI00015B42EF Cluster: PREDICTED: similar to DNA polymerase
zeta catalytic subunit; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to DNA polymerase zeta catalytic
subunit - Nasonia vitripennis
Length = 2006
Score = 713 bits (1763), Expect = 0.0
Identities = 382/877 (43%), Positives = 544/877 (62%), Gaps = 61/877 (6%)
Query: 764 IQPVVRPPTSEQVKKWIN-----EQKALQLLSQFSSEQ------------AISK--NMDD 804
I+P+ PP+ E V+ W+ EQK + + E ++SK + +D
Sbjct: 1071 IRPLYSPPSRESVESWLKAKEKREQKEKEEKEKVEKEMEKSSIATPDVSLSLSKIFHPED 1130
Query: 805 FNNSQALGLNEDEINS--SIVSIEN--------CESADFLTSMVIEVHTSVRGDMHPDPA 854
F++ + + E NS S+V IE+ + FLT + ++VH R ++ PDP
Sbjct: 1131 FSHHLGVSCGQIEFNSRSSVVDIEDGNLGKAKALTTYQFLTVLCLDVHPITRPNLLPDPR 1190
Query: 855 VDPIKAVFYSVINDCPNNHFLKKSLT-GIIVVD-----SSSRKYLDGCVFNVPVIYVSNE 908
D I AVFY++ ND P + K L G+I+VD S +K G +IYV E
Sbjct: 1191 QDRIAAVFYAIHNDVPPDWNQAKPLDCGVIIVDPEKVNSKIKKLNGGTEQEQSLIYVEKE 1250
Query: 909 IETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEK--NRQKR 966
+ +EV+ L+ DP+I+ G++IE SWGY+ +RA + G ++ +SRI N + R
Sbjct: 1251 EDVFEEVVSLIQRCDPEILIGWDIEFLSWGYLFQRASVFGKNLSGKISRIPSAKCNWETR 1310
Query: 967 W-------MKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYA 1019
+ E+ E ++ GR++ ++WR+ R E+AL+ Y++EN MY V+NER+P+ S+
Sbjct: 1311 AHDESTTELHLETLVEVKLPGRIVLDIWRIMRSEIALTGYTYENVMYNVMNERIPNPSFD 1370
Query: 1020 QLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGS 1079
L+ WW S +W ++ Y K+ G R+L LDIINRTSE ARL+G+Q++EV SRGS
Sbjct: 1371 TLTKWW--NSSNTQWRVIDNYSNKVIGVHRLLHHLDIINRTSEHARLYGIQFYEVFSRGS 1428
Query: 1080 QFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLY 1139
QFRVES+MLR A+P+N IA+SP+ QR MRAPE+LPLI EPES Y DPV+VLDFQSLY
Sbjct: 1429 QFRVESMMLRLAKPMNYIAVSPSAHQRGCMRAPESLPLIMEPESTMYLDPVVVLDFQSLY 1488
Query: 1140 PSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFV 1199
PS++IAYNYCFSTC+GR+++I +EFGA L++ ++ + L + ++++P G+ FV
Sbjct: 1489 PSIIIAYNYCFSTCLGRIEHIGSPHPFEFGATTLKVQKNLAKKL--QNKMNFAPCGVAFV 1546
Query: 1200 KTSVRRGVLPXXXXXXXXXXQAVKKSMK--MQNDEAVKKAMHSRQLGLKLIANVTYGYTA 1257
K+ VRRG+LP VKK++K + D A+++A+HSRQLGLKLIANVTYGYTA
Sbjct: 1547 KSDVRRGILPRMLTEILETRLMVKKAIKDHSKEDRALQRALHSRQLGLKLIANVTYGYTA 1606
Query: 1258 ANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLE 1317
ANFSGRMPC+EV DSVV+KG+ETLERAIK+V W A+V+YGDTDS+F+L+ G++R E
Sbjct: 1607 ANFSGRMPCIEVGDSVVSKGKETLERAIKMVESTPEWGARVVYGDTDSLFILLKGKTREE 1666
Query: 1318 AFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIE 1377
AF IG ++ADAVTA NP PV LK EKV QPCILQTKKRY G+M+E+ + +KP Y AKGIE
Sbjct: 1667 AFAIGAEMADAVTAANPKPVKLKFEKVMQPCILQTKKRYCGYMYENLN-DKPVYLAKGIE 1725
Query: 1378 TVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQ 1437
TVRRDGCPA K+L +SL LF +MS+VK+ V L ++ + +L F +E+ G
Sbjct: 1726 TVRRDGCPAVAKILEKSLRILFDTNNMSMVKQYVTRQLDKVLSGRASIQDLTFAKEFRGM 1785
Query: 1438 AGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDR 1497
GY+ A P E+ KR+ KD RA+PRTG RV +++ GAP L+R R P EL D
Sbjct: 1786 KGYKAAACVPALELTKRLIQKDPRAVPRTGARVPYIIVAGAPNEALIRCVRAPMELILDP 1845
Query: 1498 SLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNELGYNRTAQQRE--------QTQSGG 1549
LRP+ YY T+V GVD + W+ E+ + + + + + Q
Sbjct: 1846 GLRPNATYYVTKVIIPPLNRCLKLIGVDAYTWYMEMPHRQALNRLQGPALLNANRKQKTT 1905
Query: 1550 IEKYMSRERCAVCGVRTIVRSAVCPQCAHTQRACVVL 1586
I +Y+ C CG ++ R +C +C + Q +V+
Sbjct: 1906 ISQYLCNATCPSCG-QSCDR-GICAECVNNQSQTLVV 1940
Score = 258 bits (632), Expect = 9e-67
Identities = 149/441 (33%), Positives = 246/441 (55%), Gaps = 40/441 (9%)
Query: 4 PTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLL 63
P +D T+S+FRG+DIKQVPVLRIFG ++G K CLHIHGVFPY Y+P Q L
Sbjct: 16 PIPEVDPTFSQFRGSDIKQVPVLRIFGTTQNGEKVCLHIHGVFPYLYVPYSGQIKADILA 75
Query: 64 YQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQA 123
Y++AA+LD A+NI++ A ++ QHVYK+ V G+PFYGYH K H + K++ Y P +IK+A
Sbjct: 76 YRLAAALDTAINISLGSAKANTQHVYKVHQVSGIPFYGYHRKNHHFFKIYFYNPAMIKRA 135
Query: 124 VELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFRKSGFSQKSNEVLY 183
+L +G IL Q FQPHE+H+ FT+QF ID+N++GMS I+L++V+ R S ++ E L
Sbjct: 136 TDLLQNGCILDQVFQPHEAHIPFTMQFMIDYNIYGMSMINLRNVKHRHSATVSQTEEKLS 195
Query: 184 DTKEN--------------TLTSESSCHYEADCMASHIINRQRIGKGDGIENPGLEEVWN 229
+ N ++ +S C E D AS I+NR+ I KG + NPG++ +W
Sbjct: 196 NNSNNLSDFESEVKEYLPYSVKKQSVCKLEIDAWASDILNREVIDKGMDL-NPGIDAIWE 254
Query: 230 QELERRKQLNM---SLASKSLSQGLTSLKQVETDSHYKFENIFAVKL---SNKIDKPVL- 282
+E RR Q + S + S + ++ TD+ + A +L ++ D+ L
Sbjct: 255 EEKARRAQAGLVGESQLTHPSSPERSQAARILTDNDIYHQKRLAQRLCVIESQGDESSLS 314
Query: 283 --LEHAYYPAETLGDTQLFKAVDVSIHLPSKDLDLTLNRTTKMNLNEHEEEDLDTTIVDE 340
+++ YP D+ L A + IH + ++N+ D+ + +E
Sbjct: 315 PNSQNSSYPLPVPDDSNLLNASRLEIHAGPLG-----TSAIQQSINQS-----DSDLNNE 364
Query: 341 NLVLNSSMSLQYSQVLLNSEDMELIDMLHDM--DQQ----RVEEDSIMGTPANRDQEVDM 394
+++L+ +S + LNS D+E++D+L ++ DQ+ ++ +SI+G+ ++ D+
Sbjct: 365 SIMLSWQSQASFSDISLNSSDLEVVDLLANLAKDQEDIPSSIDSNSILGSQKSQRNLEDL 424
Query: 395 ELDDAEYSRIFNDDSVCHDQN 415
++ + + ++ D N
Sbjct: 425 GVEQDNPADVEDEGEEVTDLN 445
>UniRef50_Q27RS8 Cluster: DNA polymerase; n=36; Neurospora|Rep: DNA
polymerase - Neurospora crassa
Length = 1926
Score = 527 bits (1300), Expect = e-147
Identities = 296/723 (40%), Positives = 428/723 (59%), Gaps = 26/723 (3%)
Query: 829 ESADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFY---SVINDCPNNHFLKKSLTGIIVV 885
+ A ++++M +EVH + RG + PDP D ++ VF+ S +N ++ GI+V
Sbjct: 924 DQAQYMSAMSLEVHVNTRGKLVPDPEEDEVQCVFWYMRSEVNALRGTQAPDDTVRGIVVF 983
Query: 886 DSSSRKYLDGCV--FNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLER 943
S D +VPV+ + E++ + ++++V HDPDI GYE+ +SWGY++ER
Sbjct: 984 -SEDGLLADRIRKHTSVPVVQETTELDMMVRMVEIVRNHDPDIFTGYEVHGSSWGYLIER 1042
Query: 944 AEI-LGLDVLKDLSRITEKNRQK------RWMKNESDYEGRIIGRVIFNVWRLFRHELAL 996
A I LD+ + SR+ ++ + RW N + RI GR + N+WR R EL L
Sbjct: 1043 ARIKYELDLCDEFSRMKSQSNGRIGKDADRWGFNTTS-SIRITGRHMINIWRAMRGELNL 1101
Query: 997 SSYSFENCMYEVLNERVPSYSYAQLSDWWC-DESKMLRWIPVEYYLTKLSGTVRMLQKLD 1055
Y+ EN ++ +L+ R+P YS+ LSDW+ D K L + + YYLT+ + +L K +
Sbjct: 1102 LQYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDKV-LRYYLTRTRLDIEILDKNE 1160
Query: 1056 IINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETL 1115
+I RTSE ARL G+ ++ V SRGSQF+VES+M R A+P N + SP+ KQ A E L
Sbjct: 1161 LIPRTSEHARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLPSPSRKQVGAQNALECL 1220
Query: 1116 PLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRI 1175
PL+ EP+S FYS P++VLDFQSLYPS+MIAYNYC+ST +GR+ + G F ++ +
Sbjct: 1221 PLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVSWRGRNKMGFMDYKRQ- 1279
Query: 1176 PRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDE-AV 1234
L +L+K+ I+ +P G+ + K +R+ +L VK MK D+ A+
Sbjct: 1280 --EGLLSLLKD-YINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVKSGMKQDKDDRAI 1336
Query: 1235 KKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTW 1294
+ +++R L LKL+ANVTYGYT+A+FSGRMPC E+ADS+V GRETLERAI + W
Sbjct: 1337 QPLLNNRPLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAFIHSVQKW 1396
Query: 1295 NAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKK 1354
+A V+YGDTDS+FV + GR+R +AFEIGQ+IADAVT NP PV LK EKVY PCIL KK
Sbjct: 1397 DADVVYGDTDSLFVSLKGRTREQAFEIGQEIADAVTKLNPRPVKLKFEKVYHPCILLAKK 1456
Query: 1355 RYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKAT 1414
RYVG+ +ES DQ P ++AKGIETVRRDG PA ++ ++L LF D+S VK +
Sbjct: 1457 RYVGYKYESRDQTVPVFDAKGIETVRRDGTPAEQRIEEKALKILFETADLSQVKSYFQEQ 1516
Query: 1415 LSRLAETSLPVHELFFTREY----HGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRV 1470
++ ++ V + F RE + +G R G + IA + +D RA P+ G RV
Sbjct: 1517 CHKIMRGAVSVQDFCFAREVKLGTYSTSG-RGGPAPAGALIATKKMKEDARAEPQYGERV 1575
Query: 1471 SWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWW 1530
++V GAPG+ LV P+EL + YY + G +V W+
Sbjct: 1576 PYVVMAGAPGLRLVDRCVEPEELLNNAHATLDADYYINKNIIPPLERIFNLVGANVRTWY 1635
Query: 1531 NEL 1533
E+
Sbjct: 1636 EEM 1638
Score = 124 bits (299), Expect = 2e-26
Identities = 75/225 (33%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 4 PTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLL 63
P DV +S R +VPV+R+FG G K C HIHG FPY Y+ + EP
Sbjct: 23 PQFDQDVRFS--RSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDG-DLEPNKD 79
Query: 64 YQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQA 123
+ +A S K ++V +ISL KG PFYG++ YLK++L+ P ++ +
Sbjct: 80 HALAISYRK------DPIRDRPKYVARISLTKGTPFYGFYVGYRFYLKIYLFNPVVMSRL 133
Query: 124 VELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFRKSGFSQKSN---- 179
V+L G I+ + FQP+E+HL + LQF D+NL+G + +D FR SN
Sbjct: 134 VDLLQHGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAPVAKHDSNIEGR 193
Query: 180 EVLYDTKENTLTSE-----------SSCHYEADCMASHIINRQRI 213
E + + T+ SE S C E D I+NR+++
Sbjct: 194 EAEHHWDDTTIPSELITDNYSLPRASHCSLEVDICVEDILNRKQV 238
>UniRef50_A1D832 Cluster: DNA polymerase; n=9; Pezizomycotina|Rep: DNA
polymerase - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 1686
Score = 526 bits (1297), Expect = e-147
Identities = 304/822 (36%), Positives = 459/822 (55%), Gaps = 37/822 (4%)
Query: 770 PPTSEQVKKWINEQKAL-----QLLSQFSSEQAISKNMDDF----NNSQALGLNEDEINS 820
PP+ +V +W +E+++ + + SE + N+ G +
Sbjct: 773 PPSRAEVLEWFDEEQSRCQTQPKAAKEPDSEPQLQPNIQSQIEGPTQKNDYGFKYSQKGK 832
Query: 821 SIVSIENCESADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPN---NHFLKK 877
S S+E+ +++SM +EVH + RG + P+P D I +F+ + +D + N L
Sbjct: 833 S-TSVEH--QTQYMSSMSLEVHVNTRGVLLPNPEEDEISCIFWCIQSDDQDIDVNGNLPG 889
Query: 878 SLTGIIVVDSSSRKYLD-GCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNS 936
G+I S + + + E++ I+ ++ +V HDPDI+ GYE+ S
Sbjct: 890 VHVGMIAQGSGDGPTSKLSKALRIELEHEPTELDLINRLVDIVRYHDPDIITGYEVHNGS 949
Query: 937 WGYVLERA-EILGLDVLKDLSRITEKNRQK------RWMKNESDYEGRIIGRVIFNVWRL 989
WGY++ERA + D+ +LSR+ + + RW N + R+ GR + N+WR
Sbjct: 950 WGYLIERARKKYDFDICDELSRVRSQAHGRFGKDADRWGFNHTS-SIRVTGRHMINIWRA 1008
Query: 990 FRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVR 1049
R EL L Y+ EN ++ +L+ R+P YSY L+ W+ VEY+++++ +
Sbjct: 1009 MRSELNLLQYTMENVVFHLLHRRIPHYSYRDLTAWYQSGKPRDLLKVVEYFVSRVQMNLE 1068
Query: 1050 MLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTM 1109
+L+ ++I RTSE ARL G+ ++ V SRGSQF+VESLM R A+P N + +SP+ +Q
Sbjct: 1069 ILESNELIPRTSEQARLLGIDFFSVFSRGSQFKVESLMFRIAKPENYLLVSPSRRQVGQQ 1128
Query: 1110 RAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFG 1169
A E LPL+ EP+S FY+ P++VLDFQSLYPS+MIAYNYC+ST +GRV G F
Sbjct: 1129 NALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFLGRVSLWRGRNKMGFM 1188
Query: 1170 AWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQ 1229
++ R PR LE L+K+ I+ +P G+ + K VR+ +L VK MKM
Sbjct: 1189 DYK-RQPRV-LE-LLKDK-INIAPNGMMYAKPEVRQSLLARMLAEILETRVMVKTGMKMD 1244
Query: 1230 NDEAV-KKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLV 1288
D+ V ++ +++RQL LKLIANVTYGYT+A+FSGRMPC E+ADS+V GRETLE+AI L+
Sbjct: 1245 KDDKVLQRLLNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEKAIALI 1304
Query: 1289 RENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPC 1348
W A+V+YGDTDS+FV + GR+R EAF+IG++IA AVT NP P+ LK EKVY PC
Sbjct: 1305 HSVERWGAEVVYGDTDSLFVYLKGRTRDEAFDIGEEIAKAVTDINPHPIKLKFEKVYHPC 1364
Query: 1349 ILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVK 1408
+L KKRYVGF +E +Q++P ++AKGIETVRRDG PA K+ ++L LF D+S VK
Sbjct: 1365 VLLAKKRYVGFKYEHRNQKEPEFDAKGIETVRRDGTPAEQKIEEKALKLLFRTADLSQVK 1424
Query: 1409 RLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGW 1468
R + +++ + + + + F +E G P I+ + ++D R+ P+ G
Sbjct: 1425 RYFQKQCAKIMQGRVSIQDFCFAKEVRLGTYSERGLLPPGAMISTKKMVEDPRSEPQYGE 1484
Query: 1469 RVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFK 1528
RV ++V GAPG LV P+ L D L YY + G +V +
Sbjct: 1485 RVPYVVVTGAPGSRLVDRCVAPETLLHDAELELDAEYYINKNIIPPLERIFNLVGANVRQ 1544
Query: 1529 WWNELGYNRTAQQREQTQSGG--------IEKYMSRERCAVC 1562
W+ E+ + ++ + S +E YM C VC
Sbjct: 1545 WYEEMPKFQLIRRIKGAASAAGKDAKGKTLESYMKSSSCIVC 1586
Score = 109 bits (263), Expect = 5e-22
Identities = 68/202 (33%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 22 QVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNP-EPQLLYQIAASLDKALNIAMKQ 80
+VPV+RIFG + G K C+H+HG FPY YI P +P+ + +A LN
Sbjct: 39 KVPVIRIFGATETGQKVCVHVHGAFPYLYIEY--DGPLDPEQDHALA------LNYRRNA 90
Query: 81 ATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVELFSSGAILGQTFQPH 140
V I+LVKG+PFYGYH + K++L P + +L GA+L + QP+
Sbjct: 91 YDKKTAFVAHITLVKGVPFYGYHVGYRFFFKIYLLDPVYTTRLADLLLQGAVLKRPLQPY 150
Query: 141 ESHLNFTLQFFIDFNLFGMSDIDLQSVQFRK--------SGFSQK--SNEVLYD--TKEN 188
ESHL + Q+ D+NL+G + + V+FR S S + + D +
Sbjct: 151 ESHLQYVPQWMCDYNLYGCAYMKCSRVKFRSPIPEYYELSNLSHRWHDRSIQPDCVSDAT 210
Query: 189 TLTSESSCHYEADCMASHIINR 210
L +S C EAD I+NR
Sbjct: 211 LLPKQSHCPLEADVCVHDILNR 232
>UniRef50_Q2H423 Cluster: DNA polymerase; n=6; Pezizomycotina|Rep: DNA
polymerase - Chaetomium globosum (Soil fungus)
Length = 1755
Score = 524 bits (1294), Expect = e-147
Identities = 302/802 (37%), Positives = 452/802 (56%), Gaps = 36/802 (4%)
Query: 770 PPTSEQVKKWINEQKALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSSIVSIENCE 829
PPT +V W E++ + +S SQ +G + S +
Sbjct: 803 PPTFAEVSGWWEEKEKCKTQRVRPGRPPLSTQTQKPELSQIIGPTPKNTHGFKYSQKQKS 862
Query: 830 S-----ADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVIND--CP-NNHFLKKSLTG 881
+ A ++++M +E+H + RG + P+P D ++ +F+ + +D C + ++TG
Sbjct: 863 TSVQHEAQYMSTMSLEIHVNSRGKLVPNPEEDEVQCIFWCLRSDEQCLFGSQSDDNTITG 922
Query: 882 IIVVDSSSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNI---HDPDIMCGYEIEMNSWG 938
I+V+ L V N V E +D ++K+V I HDPDI+ GYE+ +SWG
Sbjct: 923 IVVLSGDG--LLAKQVRNQTSCQVDEEASELDLLVKMVEIVRAHDPDILTGYEVHGSSWG 980
Query: 939 YVLERA-EILGLDVLKDLSRITEKNRQKRWMKNESDYEGR------IIGRVIFNVWRLFR 991
Y++ERA D+ + SR+ ++ K + KN + + + GR I NVWR R
Sbjct: 981 YLVERAMHKYEFDLCNEFSRMKSESFGK-FGKNADAWGSKTTSNLHVTGRHIINVWRAMR 1039
Query: 992 HELALSSYSFENCMYEVLNERVPSYSYAQLSDWWC-----DESKMLRWIPVEYYLTKLSG 1046
EL L YS EN ++ +L+ R+P YS+ L+DW+ D SK+LR YYL +
Sbjct: 1040 GELNLLQYSMENVVWHLLHRRIPHYSWQTLTDWYLSGRPRDLSKVLR-----YYLRRTRL 1094
Query: 1047 TVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQR 1106
+ +++ ++I RTSE ARL G+ ++ V SRGSQF+VES+M R A+P N + +SP KQ
Sbjct: 1095 DIEIIEANELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLVSPNRKQV 1154
Query: 1107 STMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAY 1166
+ A E LPL+ EP+S FY P++VLDFQSLYPS+MIAYNYC+STC+GRV + G
Sbjct: 1155 GSQNALECLPLVMEPQSAFYPSPLLVLDFQSLYPSVMIAYNYCYSTCLGRVVSWRGTNKM 1214
Query: 1167 EFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSM 1226
F +R R L L+K+ I+ +P G+ + K +R+ +L VK M
Sbjct: 1215 GFTEYRRR---EGLLRLLKDH-INIAPNGMMYTKPEIRKSLLAKMLTEILETRVMVKSGM 1270
Query: 1227 KM-QNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAI 1285
K ++D+ ++K +H+RQL LKL+ANVTYGYT+A+FSGRMPC E+ADS+V RETLERAI
Sbjct: 1271 KEDKDDKTLQKLLHNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTSRETLERAI 1330
Query: 1286 KLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVY 1345
+ W A+V+YGDTDS+FV + GR+R +AF+IG ++A +T NP PV LK EKVY
Sbjct: 1331 AYIHSVERWGAEVVYGDTDSLFVYLKGRTREQAFDIGAEMAKEITDLNPRPVKLKFEKVY 1390
Query: 1346 QPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMS 1405
PC+L KKRYVG+ +ES DQ P ++AKGIETVRRDG PA K+ ++L LF D+S
Sbjct: 1391 HPCVLLAKKRYVGYKYESRDQTVPEFDAKGIETVRRDGTPAEQKIEEKALKILFETADLS 1450
Query: 1406 VVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPR 1465
VK ++ SR+ ++ + + F +E + G P I+ R ++D RA P+
Sbjct: 1451 QVKEYFQSQCSRIMRGAVSIQDFLFAKEIKLGSYSGKGPGPPGALISTRRMLEDARAEPQ 1510
Query: 1466 TGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVD 1525
G RV ++V GAPG L+ P++L D YY ++ G +
Sbjct: 1511 YGERVPYVVVSGAPGARLIDRCVAPEDLLNDPHASLDAEYYISKNLIPPLERIFNLVGAN 1570
Query: 1526 VFKWWNELGYNRTAQQREQTQS 1547
V W++E+ + ++ E T +
Sbjct: 1571 VRAWYDEMPKVQQVRRLEMTSA 1592
Score = 140 bits (340), Expect = 2e-31
Identities = 78/219 (35%), Positives = 119/219 (54%), Gaps = 19/219 (8%)
Query: 14 EFRGTDIKQ--VPVLRIFGPAKDGYKACLHIHGVFPYFYIPC--PTQNPE-PQLLYQIAA 68
++R KQ VPV+R+FG + G K C H+HG FPY YI P P + +Y +
Sbjct: 29 DYRSEPNKQPKVPVIRVFGSTETGQKVCAHVHGAFPYLYIEYRGPLDKPTVSEYIYALHL 88
Query: 69 SLDKAL--NIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVEL 126
S+D+AL N Q + V +++LVKG+PFYG+H YLK+++ P ++ + +L
Sbjct: 89 SIDRALAINYRRDQRREPQRFVARVTLVKGVPFYGFHVGYRYYLKIYMLNPVVMTRLADL 148
Query: 127 FSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFR-----KSGFSQ----- 176
G ++GQ FQP+E+HL + LQF D+NL+G +D + V+FR +G
Sbjct: 149 LLQGLVMGQKFQPYEAHLQYLLQFMADYNLYGCDYLDAEDVRFRGPIPDPAGPDDPPRIW 208
Query: 177 KSNEVLYD--TKENTLTSESSCHYEADCMASHIINRQRI 213
SN +L + T E +L S C E D +I NR+ +
Sbjct: 209 DSNTILPEAITNEMSLPRASHCSIEVDICVQNISNRKAV 247
>UniRef50_A7PS77 Cluster: Chromosome chr14 scaffold_27, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_27, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1905
Score = 517 bits (1276), Expect = e-145
Identities = 299/764 (39%), Positives = 428/764 (56%), Gaps = 29/764 (3%)
Query: 834 LTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGIIVVDSSSRKYL 893
+T + IE+ RGD+ PDP D I + + D ++ L+ + ++ RK L
Sbjct: 1068 VTLLSIEIQAESRGDLRPDPRYDAINVIVLLIQED--DDSALEVFVLCRSNIEPCQRK-L 1124
Query: 894 DGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLK 953
DG + V+ S E D+ I ++ DPDI+ G++I+ S G++ ERA LG+ +L
Sbjct: 1125 DG-ISGCKVLVSSEEKLLFDDFINIICSFDPDILIGWDIQGGSLGFLAERASHLGIGLLN 1183
Query: 954 DLSRITEKNR---------QKRWMKNESDYEG-RIIGRVIFNVWRLFRHELALSSYSFEN 1003
+SR + + +KR + G + GR++ NVWRL R E+ L+ Y+ E+
Sbjct: 1184 KISRTPSETKTASRNFEIPEKRDEWGRTHASGVHVGGRIVLNVWRLMRGEIKLNMYTAES 1243
Query: 1004 CMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSEL 1063
VL +++PS L+ W+ R+ +EY + + ++ +LD+INRTSEL
Sbjct: 1244 VAEAVLRQKIPSIRNRVLTKWFSSGPGRARYRSIEYVIQRAKLNFEIMNQLDMINRTSEL 1303
Query: 1064 ARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPES 1123
AR+FG+ ++ VLSRGSQ+ VES+ LR A N +A+SP +Q +T A E LPL+ EPES
Sbjct: 1304 ARVFGIDFFSVLSRGSQYHVESMFLRLAHTQNFLAISPGPQQVATQPAMECLPLVMEPES 1363
Query: 1124 RFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEAL 1183
FY+DPV+VLDFQSLYPSM+IAYN C+STC+G+V + G L L
Sbjct: 1364 GFYADPVVVLDFQSLYPSMIIAYNLCYSTCLGKVAPSKADV---LGVSIYSPDPHALHDL 1420
Query: 1184 VKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMK--MQNDEAVKKAMHSR 1241
L+ +P G+ +V + R+GVLP VKK+MK + + + +++ ++R
Sbjct: 1421 KDQILL--TPNGVMYVPSKARKGVLPRLLEEILSTRIMVKKAMKKLVPSQQVLQRIFNAR 1478
Query: 1242 QLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYG 1301
QL LKLIANVTYGYTAA +SGRMPC E+ADS+V GR TLE AI LV + W AKVIYG
Sbjct: 1479 QLALKLIANVTYGYTAAGYSGRMPCAELADSIVQCGRRTLENAISLVNTHDKWKAKVIYG 1538
Query: 1302 DTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMF 1361
DTDSMFVL+ GR+ E+F+IG +IA AVTA NP PV LK+EKVY PC L TKKRYVG+ +
Sbjct: 1539 DTDSMFVLLKGRTVKESFQIGHEIASAVTAMNPNPVTLKMEKVYHPCFLLTKKRYVGYSY 1598
Query: 1362 ESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAET 1421
ESPDQ +PT++AKGIETVRRD C A K + QSL F H D+S VK ++ R+
Sbjct: 1599 ESPDQIEPTFDAKGIETVRRDTCGAVAKTMEQSLRLFFEHQDISKVKVYLQRQWRRILSG 1658
Query: 1422 SLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMK-DRRAIPRTGWRVSWLVTCGAPG 1480
+ + + F +E +S PP I M+ D RA P RV ++V G PG
Sbjct: 1659 RVSLQDFVFAKEVRLGTYSSRASSLPPAAIVAIKAMRADPRAEPCYAERVPYVVIHGEPG 1718
Query: 1481 VPLVRLARTPQELTR-DRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNELG----- 1534
LV L P +L D R + YY + G D+++W++E+
Sbjct: 1719 ARLVDLVVDPLDLLAIDSPYRLNDQYYINKQIIPALQRVFGLVGADLYQWFSEMPRPVRE 1778
Query: 1535 -YNRTAQQREQTQSGGIEKYMSRERCAVCGVRTIVRSAVCPQCA 1577
Y + I+ Y + C +CG + + +C +C+
Sbjct: 1779 VYAKHKSHAPNPYRTRIDFYYLSKHCILCGELSPASAHICDKCS 1822
Score = 103 bits (248), Expect = 3e-20
Identities = 52/142 (36%), Positives = 83/142 (58%), Gaps = 5/142 (3%)
Query: 64 YQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQA 123
+ ++ ++KAL + A S QHV+ SLV+ FYGYH E L++K++LY P + +A
Sbjct: 118 HAVSLGVEKALKLK-GNAGSKRQHVHGCSLVRAKNFYGYHSSEELFVKIYLYHPHDVSRA 176
Query: 124 VELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFRKSGFSQ-KSNEVL 182
L G++L ++ QPHESH+ F LQF ID+NL+GM + L ++FR S +V
Sbjct: 177 ANLLLGGSVLDKSLQPHESHIPFLLQFLIDYNLYGMGHLHLSKMKFRHPVPDVFSSRKVN 236
Query: 183 YDTKENTLTSESSC---HYEAD 201
Y+ ++ + +C H +AD
Sbjct: 237 YNGQQKLEPDDFACISAHLQAD 258
Score = 69.7 bits (163), Expect = 6e-10
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 1 MTKPTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPE- 59
M P LD+ YS F+G +K+VPV+RI+G G K CLH+H PY Y+PC P+
Sbjct: 22 MAPPIPDLDICYSSFQGGMVKEVPVIRIYGSTPVGQKTCLHVHRALPYLYVPCTDLMPQS 81
Query: 60 PQ 61
PQ
Sbjct: 82 PQ 83
>UniRef50_Q4PD82 Cluster: DNA polymerase; n=1; Ustilago maydis|Rep:
DNA polymerase - Ustilago maydis (Smut fungus)
Length = 1678
Score = 516 bits (1274), Expect = e-144
Identities = 282/775 (36%), Positives = 444/775 (57%), Gaps = 19/775 (2%)
Query: 770 PPTSEQVKKWINEQKALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSSIVSIENCE 829
PPT + + W ++K ++ + ++ + G + ++ + + +
Sbjct: 737 PPTLLEARAWRQKEKVIERQRSKRRRARLLSQIERLTQANDFGFKISQHKATALVKRDKQ 796
Query: 830 SADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPN--NHFLKKSL-TGIIVVD 886
+T++ +EV T+ R + PDPA+D I+++ YS N+ N + + L TG+I+V
Sbjct: 797 H---MTTLAVEVMTTTRDSLFPDPALDAIQSIVYSFQNEDENLQDTGSRPDLRTGLIIVS 853
Query: 887 SSSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERA-E 945
+ + ++ V V +E+E + +I LV DP+I+ G+EI +SWGY++ERA +
Sbjct: 854 GDEINFDRLGLSHLAVEVVEDELELFNTLIDLVRAFDPEILVGWEIHSSSWGYIVERASK 913
Query: 946 ILGLDVLKDLSRITEKNRQKRWMKNES-----DYEGRIIGRVIFNVWRLFRHELALSSYS 1000
D++ + R N + K+++ R GR N+WRL + EL L+ Y+
Sbjct: 914 EYDYDLVPQIGRAIIHNTGRAGGKSDNYAYTQSSALRFTGRHTLNLWRLMKGELTLNLYT 973
Query: 1001 FENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRT 1060
EN Y +L+ R+P YS+ L+ W+ L + YY+ + + ++ + + + RT
Sbjct: 974 LENVCYHLLHRRIPKYSHQTLTQWYKSGRAELIRRALLYYVDMVELELEIIAESEFVLRT 1033
Query: 1061 SELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFE 1120
+E AR++G+ ++ V+SRGSQF+VES+MLR A+P N + +SP+ Q A E LPLI E
Sbjct: 1034 AEFARIYGIDFFSVISRGSQFKVESIMLRIAKPENFVLISPSRAQVGKQNAAECLPLIME 1093
Query: 1121 PESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKL 1180
P+S FY P+IVLDFQSLYPS+MIAYN C+STC+GRV G + +FG P+ L
Sbjct: 1094 PQSAFYKGPLIVLDFQSLYPSIMIAYNLCYSTCLGRVAGFKGTS--KFGVTEYAPPKGLL 1151
Query: 1181 EALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKM-QNDEAVKKAMH 1239
L + ++ S G+ FVK SVR+ +L VK SMK ++D++ ++ +
Sbjct: 1152 SLLQDD--VNISSNGLLFVKPSVRKSLLAKMLSEILDTRVMVKSSMKATKSDKSFQRIQN 1209
Query: 1240 SRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVI 1299
+RQ+ LKL+ANVTYGYT+A+FSGRMPCVE+AD++V GRETLE+A+ L+ W A+V+
Sbjct: 1210 ARQISLKLLANVTYGYTSASFSGRMPCVEIADAIVQTGRETLEKAMDLINGTEEWGAQVV 1269
Query: 1300 YGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGF 1359
YGDTDS+FV +PGR++ EAF +G IAD VT+ NP PV LK EKVY P +L KKRYVGF
Sbjct: 1270 YGDTDSLFVYLPGRTKEEAFTLGNVIADKVTSLNPRPVKLKFEKVYLPSVLLAKKRYVGF 1329
Query: 1360 MFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLA 1419
+E+ D+ +P ++AKGIETVRRD PA ++L + LF D+S+VK ++ ++
Sbjct: 1330 KYETLDEREPGFDAKGIETVRRDFHPAIQRMLEACIRILFRSRDLSLVKSYLQRQWRKIL 1389
Query: 1420 ETSLPVHELFFTREYHGQAGYRPGASAPPN-EIAKRIGMKDRRAIPRTGWRVSWLVTCGA 1478
E + + F +E Y + PP +A R + D R+ P+ G RV ++++ G
Sbjct: 1390 EGRVSAQDFIFAKEVR-LGSYSDKVAPPPGAAVASRRMLADPRSEPQYGERVPYIISQGE 1448
Query: 1479 PGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNEL 1533
P L + A +P+ +D L+ + YY TR G DV W++ +
Sbjct: 1449 PRAKLNQQAVSPEAFLKDPQLQINALYYITRTIIPPLARVFNLLGADVEAWFHHM 1503
Score = 117 bits (281), Expect = 3e-24
Identities = 87/278 (31%), Positives = 131/278 (47%), Gaps = 43/278 (15%)
Query: 1 MTKPTAGLDVTYSEFR--GTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCP-TQN 57
+T PT D T F G +++VPVLR+FG G + CL+IH V+PY YI + +
Sbjct: 46 LTVPTP-FDRTSCAFNAEGQPLRKVPVLRLFGATPAGQRVCLYIHNVYPYCYIQYKGSLD 104
Query: 58 PEPQLLY--QIAASLDKALNIAMKQA---TSSNQHVYKISLVKGLPFYGYHDKEHLYLKV 112
P+ L Y ++ L+ A+ ++++ T +NQ + I L KG+ FYGYH YLK+
Sbjct: 105 PDNVLRYIHRLGRGLNAAMAASLRRNLHDTDANQFIAAIHLCKGVNFYGYHVGYSYYLKI 164
Query: 113 FLYRPGLIKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFR-- 170
P + + SG ++ FQP E H+ + LQF +D+N+FG +DL ++FR
Sbjct: 165 SFVDPAHNYRIAAILESGGVMKTVFQPFEIHIRYQLQFMLDYNIFGCDYVDLDDIRFRLP 224
Query: 171 -----------KSGFSQKS-----NEVLY-DTKENTLTSESSCHYEADCMASHIINRQRI 213
S +S N + Y + + S C EAD A IINR+R
Sbjct: 225 IPEGNLVANDDLSPLDSRSKIWNRNSIPYAHVQAPDVHRGSYCELEADASAPWIINRRRF 284
Query: 214 GKGDGIEN---------------PGLEEVWNQELERRK 236
+ D N P L +W E++RRK
Sbjct: 285 KQRDIHSNFDETSTTPSDQDILVPSLSGLWEDEMKRRK 322
>UniRef50_Q0V5M4 Cluster: DNA polymerase; n=2; Pezizomycotina|Rep: DNA
polymerase - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1702
Score = 515 bits (1271), Expect = e-144
Identities = 279/730 (38%), Positives = 435/730 (59%), Gaps = 30/730 (4%)
Query: 819 NSSIVSIENCESADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKS 878
N + ++++ +++ M +EVH + RG + PDPA D I+ +FYS+ + N +
Sbjct: 814 NKKLTTVKH--ETQYMSIMSLEVHVNSRGSLVPDPAEDEIQCIFYSIQGE--ENATTDRP 869
Query: 879 LTGIIVVDSSSRKYLDGCV------FNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEI 932
GI+ + + DG V +V V + +E++ I+ ++ +V DPDI+ GYE+
Sbjct: 870 RLGILCLSTD-----DGIVERIAKQSSVDVEHEEDELDLINRIVDIVRQFDPDILAGYEV 924
Query: 933 EMNSWGYVLERAEI-LGLDVLKDLSRITEKNRQKRWMKNESDYEG-------RIIGRVIF 984
+SWGY++ERA + ++ ++SR+ ++ + E+D G RI GR +
Sbjct: 925 HNSSWGYLIERARMKYEYNLCDEISRMKSQSHGR--FGKEADRWGFTHTSTIRITGRHMI 982
Query: 985 NVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKL 1044
N+WR R EL L Y+ EN ++ +L+ R+P Y ++ L+ W+ ++++LT++
Sbjct: 983 NIWRAMRGELNLLQYTMENVVFHLLHRRIPHYQHSDLTGWYRSSKPRELAKVLDHFLTRV 1042
Query: 1045 SGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIK 1104
+ +L+ +I+ RTSE ARL G+ ++ V+SRGSQF+VES M R A+P N I +SP+ K
Sbjct: 1043 QLNLDILEANEIVPRTSEQARLLGVDFFAVISRGSQFKVESTMFRIAKPENFILISPSRK 1102
Query: 1105 QRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGET 1164
Q A E LPL+ EP+S FYS P++VLDFQSLYPS+MIAYNYC+STC+GR+ + G
Sbjct: 1103 QVGQQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTCLGRIVSWRGRN 1162
Query: 1165 AYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKK 1224
F ++ R P+ L LVK+ I+ +P G+ +VK +R+ +L +K
Sbjct: 1163 KMGFMDFK-REPQ--LLELVKD-YINIAPNGMMYVKPEMRKSLLAKMLGEILETRVMIKS 1218
Query: 1225 SMKM-QNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLER 1283
MK ++D+ +++ +++RQL LKL+ANVTYGY +A+FSGRMPC E+ADS+V GRETLE+
Sbjct: 1219 GMKQDKDDKTLQQLLNNRQLALKLLANVTYGYASASFSGRMPCSEIADSIVQTGRETLEK 1278
Query: 1284 AIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEK 1343
AI L+ W A+V+YGDTDS+F+ + GR+R +AF IG++IA AVTA NP P+ LK EK
Sbjct: 1279 AIALIHATEKWGAEVVYGDTDSLFIYLKGRTRDQAFTIGEEIAAAVTAANPRPIKLKFEK 1338
Query: 1344 VYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGD 1403
VY PC+L KKRYVGF +E +Q +P ++AKGIETVRRDG PA K+ ++L LF D
Sbjct: 1339 VYHPCVLLAKKRYVGFKYEHRNQTEPDFDAKGIETVRRDGTPAEQKIEERALKILFRTAD 1398
Query: 1404 MSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAI 1463
+S VK + ++ + + + + F +E G P IA + + D R
Sbjct: 1399 LSQVKSYFQEQCMKIMQGRISIQDFLFAKEVKLGTYSDRGPPPPGALIATKRMLADPRTE 1458
Query: 1464 PRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXG 1523
P+ G RV ++V GAPG L+ +P+ L ++ L YY ++ G
Sbjct: 1459 PQYGERVPYIVITGAPGARLIDRCVSPETLLQNDHLELDAEYYISKNLIPPLERIFNLVG 1518
Query: 1524 VDVFKWWNEL 1533
+V +W++E+
Sbjct: 1519 ANVRQWFDEM 1528
Score = 118 bits (283), Expect = 2e-24
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 5/157 (3%)
Query: 19 DIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQL---LYQIAASLDKALN 75
D QVP++R FG + G K C HIHG PY Y+ + + + + AS+D AL
Sbjct: 36 DAPQVPIIRAFGATETGQKVCAHIHGALPYLYLEYNGSLEKEVVSTYILSLRASIDHALA 95
Query: 76 IAMKQATSSNQHVY--KISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVELFSSGAIL 133
++ + +Y I+LVKG+PF+GY ++LKV++ P + + +L SGAI+
Sbjct: 96 TTYRRNAYDGKSMYVGHITLVKGVPFFGYSVGYKIFLKVYMLNPVHMTRFADLLHSGAIM 155
Query: 134 GQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFR 170
+ FQP+ESHL + LQ+ D+NL+G ID V FR
Sbjct: 156 DRVFQPYESHLQYLLQWMCDYNLYGCDYIDCAKVLFR 192
>UniRef50_P14284 Cluster: DNA polymerase zeta catalytic subunit; n=3;
Saccharomycetaceae|Rep: DNA polymerase zeta catalytic
subunit - Saccharomyces cerevisiae (Baker's yeast)
Length = 1504
Score = 515 bits (1271), Expect = e-144
Identities = 300/828 (36%), Positives = 466/828 (56%), Gaps = 37/828 (4%)
Query: 768 VRPPTSEQVKKWINEQKAL---QLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSSIVS 824
++PPT + V+KW N+ ++ + SQ S SK + F S G + + SS+
Sbjct: 608 LKPPTYDAVQKWYNKVPSMGNKKTESQISMHTPHSKFLYKFA-SDVSGKQKRK-KSSV-- 663
Query: 825 IENCESADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDC-PNNHFLKKSLTGII 883
D LT + +E+H + R D PDPA+D + + + + + P + L + GI+
Sbjct: 664 ------HDSLTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLD--LDIAYEGIM 715
Query: 884 VV-----DSSSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWG 938
+V DS+ + C+ +PV++ +E E + + LV + DPDI+ G+EI SWG
Sbjct: 716 IVHKASEDSTFPTKIQHCINEIPVMFYESEFEMFEALTDLVLLLDPDILSGFEIHNFSWG 775
Query: 939 YVLERAE-ILGLDVLKDLSRITEKNRQK---RWMKNESDYEGRIIGRVIFNVWRLFRHEL 994
Y++ER + I D++++L+R+ + + K W S I GR + N+WR R ++
Sbjct: 776 YIIERCQKIHQFDIVRELARVKCQIKTKLSDTWGYAHSSGI-MITGRHMINIWRALRSDV 834
Query: 995 ALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPV-EYYLTKLSGTVRMLQK 1053
L+ Y+ E+ + +L++R+P +S+ L++ W + V Y+L++ +++L+K
Sbjct: 835 NLTQYTIESAAFNILHKRLPHFSFESLTNMWNAKKSTTELKTVLNYWLSRAQINIQLLRK 894
Query: 1054 LDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPE 1113
D I R E ARL G+ + V RGSQF+VES ++R + + I LSP K +A E
Sbjct: 895 QDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRICKSESFILLSPGKKDVRKQKALE 954
Query: 1114 TLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRL 1173
+PL+ EPES FY P+IVLDFQSLYPS+MI YNYC+ST IGRV+ IN T G +
Sbjct: 955 CVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCYSTMIGRVREIN-LTENNLGVSKF 1013
Query: 1174 RIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDE- 1232
+PR+ L AL+KN + +P G+ + KTSVR+ L +KK+M D+
Sbjct: 1014 SLPRNIL-ALLKND-VTIAPNGVVYAKTSVRKSTLSKMLTDILDVRVMIKKTMNEIGDDN 1071
Query: 1233 -AVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVREN 1291
+K+ ++++QL LKL+ANVTYGYT+A+FSGRMPC ++ADS+V GRETLE+AI ++ ++
Sbjct: 1072 TTLKRLLNNKQLALKLLANVTYGYTSASFSGRMPCSDLADSIVQTGRETLEKAIDIIEKD 1131
Query: 1292 TTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQ 1351
TWNAKV+YGDTDS+FV +PG++ +EAF IG +A+ VT +NP P+ LK EKVY P IL
Sbjct: 1132 ETWNAKVVYGDTDSLFVYLPGKTAIEAFSIGHAMAERVTQNNPKPIFLKFEKVYHPSILI 1191
Query: 1352 TKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLV 1411
+KKRYVGF +ESP Q P ++AKGIETVRRDG PA K++ + + LF D+S +K+ +
Sbjct: 1192 SKKRYVGFSYESPSQTLPIFDAKGIETVRRDGIPAQQKIIEKCIRLLFQTKDLSKIKKYL 1251
Query: 1412 KATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNE-IAKRIGMKDRRAIPRTGWRV 1470
+ ++ + + F +E Y+ +AP + KR +D RA P+ R+
Sbjct: 1252 QNEFFKIQIGKVSAQDFCFAKEVK-LGAYKSEKTAPAGAVVVKRRINEDHRAEPQYKERI 1310
Query: 1471 SWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWW 1530
+LV G G L +P+E +L YY ++ G++V W
Sbjct: 1311 PYLVVKGKQGQLLRERCVSPEEFLEGENLELDSEYYINKILIPPLDRLFNLIGINVGNWA 1370
Query: 1531 NELGYNRTAQQREQTQSGGIEKYMSRERCAVCG--VRTIVRSAVCPQC 1576
E+ ++ A T+ I + + C CG + I +C C
Sbjct: 1371 QEIVKSKRA-STTTTKVENITRVGTSATCCNCGEELTKICSLQLCDDC 1417
Score = 105 bits (251), Expect = 1e-20
Identities = 63/187 (33%), Positives = 99/187 (52%), Gaps = 18/187 (9%)
Query: 1 MTKPTAGLDVTYSEFRGTD-IKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPE 59
M+KPT LD ++ E + QVP +R+FG G++ H+HG+ PY +I Q +
Sbjct: 34 MSKPTF-LDPSHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPYMFIKYDGQITD 92
Query: 60 PQLL-YQIAASLDKALNIAMKQA---TSSNQH------------VYKISLVKGLPFYGYH 103
L +Q A + K L + ++ + ++H V +S+VKG+PFYGYH
Sbjct: 93 TSTLRHQRCAQVHKTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVVKGIPFYGYH 152
Query: 104 DKEHLYLKVFLYRPGLIKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDID 163
+L+ K+ L P + + EL G I G+ F+ +ESH+ + LQ+ DFNLFG S I+
Sbjct: 153 VGWNLFYKISLLNPSCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWIN 212
Query: 164 LQSVQFR 170
+ FR
Sbjct: 213 VDRCYFR 219
>UniRef50_Q9P6L6 Cluster: DNA polymerase; n=1; Schizosaccharomyces
pombe|Rep: DNA polymerase - Schizosaccharomyces pombe
(Fission yeast)
Length = 1480
Score = 508 bits (1252), Expect = e-142
Identities = 282/740 (38%), Positives = 424/740 (57%), Gaps = 23/740 (3%)
Query: 837 MVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGIIVVDSSSRKYLDGC 896
+ +E+ G + PDP D I+ F++ D N+ + + G IVVD S+ G
Sbjct: 654 LALELFCCSHGGLTPDPTKDSIECCFWAYQEDV-NSSMIDR--VGFIVVDKSASNSSFGR 710
Query: 897 VF-NVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEI-LGLDVLKD 954
F + V+ V++E+E I+EVI L DP I+CGYE+ +SWGY++ERA D+ +
Sbjct: 711 SFPSCTVLVVNSELELINEVIGLNRQLDPTIVCGYEVHNSSWGYLIERASYRFNYDLPEQ 770
Query: 955 LSRI--TEK----NRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEV 1008
LSR+ T K ++ W K + I+GR + N+WR+ R E+ L +YS EN + +
Sbjct: 771 LSRLKCTSKANFAKKENAW-KYTTTSSINIVGRHVLNIWRILRGEVNLLNYSLENVVLNI 829
Query: 1009 LNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFG 1068
++ P Y+ A W + I + Y L + + +L I+ + E AR+ G
Sbjct: 830 FKKQTPYYNQADKVHLWQSSRFHEKQILLNYMLNRTRYCLEILSACAIVTKIREQARIIG 889
Query: 1069 LQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSD 1128
+ + V+SRGSQF+VES+M R A+P N I SP+ KQ + A E LPL+ EP+S Y++
Sbjct: 890 IDFMSVISRGSQFKVESIMFRIAKPENYIFPSPSAKQVAEQNALEALPLVMEPKSDLYNN 949
Query: 1129 PVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSL 1188
PV+VLDFQSLYPS++IAYN C+STC+G V+ +NG+ F + L+KN
Sbjct: 950 PVVVLDFQSLYPSIIIAYNLCYSTCLGPVKIVNGKVKLGF---MFHSSNPNIVNLIKND- 1005
Query: 1189 IHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLI 1248
++ SP G +VK +VR+ +L VK+ MK + + V K ++SRQL LKLI
Sbjct: 1006 VYISPNGYAYVKENVRKSLLAKMLEELIETRNMVKRGMKDCDSDYVNKVLNSRQLALKLI 1065
Query: 1249 ANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFV 1308
ANVTYGYT+A+FSGRMPC E+AD++V GRE L +++ + +AKV+YGDTDS+FV
Sbjct: 1066 ANVTYGYTSASFSGRMPCSEIADTIVETGREILSYSLEYINTLDFCHAKVVYGDTDSLFV 1125
Query: 1309 LVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEK 1368
+PG ++ +AF+IGQQ+A+ +T+ P P+ LK EK+Y PC L KKRYVGF FES Q+
Sbjct: 1126 ELPGATKEQAFDIGQQLANNITSRFPSPIRLKFEKIYFPCFLLAKKRYVGFKFESVSQKA 1185
Query: 1369 PTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHEL 1428
P +EAKGIETVRRDG P +LLR+ L LF D+S VK+ + ++ ++PV +
Sbjct: 1186 PIFEAKGIETVRRDGTPVQQQLLRRCLEILFKTKDLSTVKKEFQNVCYQIMSGNVPVMDF 1245
Query: 1429 FFTREYHGQAGYRPGASAPPNEI-AKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLA 1487
F++E + Y+ ++APP + A+R+ KD R P+ G RV +L+ APG L +
Sbjct: 1246 CFSKEVRLEK-YKELSTAPPGAVMARRLMTKDPRREPQYGERVPYLIIAAAPGTTLANRS 1304
Query: 1488 RTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNELGYNRTAQQREQTQS 1547
P+E + + YY G W++E+ RT+ + +T
Sbjct: 1305 VAPEEFLSSSFSQLDINYYINNSLIPPLDRFLNLLGASAQSWYHEMPKPRTSLKLTETVK 1364
Query: 1548 GGIEK-----YMSRERCAVC 1562
GGI+K ++ + C+ C
Sbjct: 1365 GGIQKKTLDTFLMEKLCSSC 1384
Score = 109 bits (261), Expect = 8e-22
Identities = 74/239 (30%), Positives = 115/239 (48%), Gaps = 15/239 (6%)
Query: 19 DIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIP----CPTQNPE-PQLLYQIAASLDKA 73
++ VPV+R+FG ++ C IH VFPY Y+ T + E P L Q+ S++ A
Sbjct: 32 ELTTVPVIRVFGLNEEAETVCCFIHNVFPYIYVEYSSFAETLDLEVPDFLSQLQTSINYA 91
Query: 74 LNIAMKQATSSNQH-VYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVELFSSGAI 132
L +A + + + V + LVKG+PFYGY +LK+ L+ P + V+LF GAI
Sbjct: 92 LALAARANPETYKPAVQSVQLVKGIPFYGYSFCFQKFLKICLFSPKNRDRLVDLFRQGAI 151
Query: 133 LGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFRKSGFSQKSNEVLYDTKENTLTS 192
L + Q +ESHL + LQF +D NL+G + IDL ++ N ++ + L +
Sbjct: 152 LNKVIQVYESHLPYLLQFMVDHNLYGCAPIDLDDSIIKRDDLLSFCNVEVHVSPNAILNA 211
Query: 193 --ESSCHYEADCMASHIINRQRIGKGDGIENPGLEEVWNQELERRKQLNMSLASKSLSQ 249
S + D +H + + L E+W E RR L S + S S+
Sbjct: 212 CWLSERNIHTDLYETH------ASSPNSLLVTSLAEIWKSEASRR-NLTSSDETNSFSK 263
>UniRef50_Q55Y13 Cluster: DNA polymerase; n=2; Filobasidiella
neoformans|Rep: DNA polymerase - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 1973
Score = 503 bits (1240), Expect = e-140
Identities = 278/726 (38%), Positives = 421/726 (57%), Gaps = 21/726 (2%)
Query: 834 LTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVIN---DCPNNHFLKKSLTGIIVVDS--- 887
++ + +EV RG + PDP D + A+FY N D P+ G +V +
Sbjct: 1126 MSILTMEVFAQSRGTLLPDPEKDAVTAIFYCYSNTDDDLPDTTIYPGYHAGYVVTSALAN 1185
Query: 888 SSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAE-I 946
+R LD F V V +E+ I+ VI +V DPD++ G+E+ +SWGY+ RA
Sbjct: 1186 PARLRLDDIPFEV----VEDELALINWVIDIVKFWDPDVLAGWELHNSSWGYLAARASGE 1241
Query: 947 LGLDVLKDLSRITEKNRQKRWMKNESDYEG--RIIGRVIFNVWRLFRHELALSSYSFENC 1004
+D++ +SRI R + + +++GR N+WR+ R E+ L+ Y+FEN
Sbjct: 1242 FAMDMMDQISRIISGRTGPRNDGYSAHHSSTFKVVGRHTLNIWRICRSEINLTQYTFENV 1301
Query: 1005 MYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELA 1064
++ +L++R+P YS + L+ W + ++Y+ + + +L + +II +T+E A
Sbjct: 1302 VFHLLHQRIPHYSPSSLTALWKSKYPSHACRVLKYFFQRTVMCMEILDQAEIITKTAEFA 1361
Query: 1065 RLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESR 1124
R+FG+ + VL+RGSQ++VES + R A+P + + +SP+ +Q AP +PLI EPES+
Sbjct: 1362 RVFGVDFASVLTRGSQYKVESFIFRIAKPESFVLVSPSKQQVGLQNAPFAVPLIAEPESK 1421
Query: 1125 FYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALV 1184
+Y+ PVIVLDFQSLYPS+MIAYN C+STC+GRV+ G +FG L++ LE L+
Sbjct: 1422 YYTHPVIVLDFQSLYPSIMIAYNICYSTCLGRVEMFKGTN--KFGFTNLKVTEGLLE-LL 1478
Query: 1185 KNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHS-RQL 1243
K+ L +P G+ FVK ++R+ +L +K +MK + AMH+ RQL
Sbjct: 1479 KDYLTV-TPNGMIFVKPAIRKSLLAKMLGEILDTRVMIKHAMKGARGDKSLTAMHNARQL 1537
Query: 1244 GLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDT 1303
GLKL+ANVTYGYT+A +SGRMPC+E+ADS+V GRETLE+A +L+ W+A+V+YGDT
Sbjct: 1538 GLKLMANVTYGYTSATYSGRMPCIEIADSIVQTGRETLEKAQELIHSRVDWDARVVYGDT 1597
Query: 1304 DSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFES 1363
DS+FV +PGRS+ +AF+IG IA+AVTA NP PV LK EKVY +L KKRYVGF +E
Sbjct: 1598 DSLFVALPGRSKEQAFKIGYDIANAVTALNPKPVKLKFEKVYMGSVLMAKKRYVGFKYEH 1657
Query: 1364 PDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSL 1423
PD +P+++AKGIET+RRDG PA K+ L LF D+S VK +++ + +
Sbjct: 1658 PDDTEPSFDAKGIETIRRDGFPAQQKMEEVCLKLLFRTQDLSKVKEFCLKEWTKILQGHV 1717
Query: 1424 PVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPL 1483
+ + +E G P +A R +KD R P+ RV +L++ A G L
Sbjct: 1718 SMQDFIIAKEVRLGTYSEKGIPPPGAAVAYRRILKDPRDEPQYAERVPYLIS-NADGRRL 1776
Query: 1484 VRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNELGYNRTAQQRE 1543
+ AR P+EL RSL YY + G DV +W++ + +T + +
Sbjct: 1777 IDRARMPEELLSSRSLSIDAEYYIRNLLIPPLSRIFNLVGADVEEWYDNM--PKTKRLGK 1834
Query: 1544 QTQSGG 1549
++GG
Sbjct: 1835 YDKAGG 1840
Score = 111 bits (266), Expect = 2e-22
Identities = 63/170 (37%), Positives = 93/170 (54%), Gaps = 21/170 (12%)
Query: 23 VPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEP-------QLLYQIAASLDKALN 75
VPV+RIFG K C +IH +PYF++P P + +P +L + A SL+ A+
Sbjct: 70 VPVIRIFGTTSSSQKICANIHLCYPYFFVPYPMDSQDPLRPERVVKLCQRFAVSLNYAIC 129
Query: 76 IAMKQ-----ATSSNQ---------HVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIK 121
+A++Q A ++N HV + LVKG PFYGYH +LK+ L P +
Sbjct: 130 LALRQNPTSAANNTNYGGGVDPKHLHVVSVILVKGTPFYGYHLGFDYFLKINLANPARLH 189
Query: 122 QAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFRK 171
A+E +LG+ +QPHE+HLN LQF DF+L+G ++L FR+
Sbjct: 190 IALEQLRKPNVLGREWQPHEAHLNHVLQFMCDFDLYGCGWLELGGGTFRE 239
>UniRef50_O64795 Cluster: DNA polymerase; n=4; Magnoliophyta|Rep: DNA
polymerase - Arabidopsis thaliana (Mouse-ear cress)
Length = 1894
Score = 501 bits (1235), Expect = e-140
Identities = 302/790 (38%), Positives = 431/790 (54%), Gaps = 51/790 (6%)
Query: 834 LTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGIIVVDSSSRKYL 893
LT + IEVH RGD+ PDP D + + V ND + F+ + + DS ++ +
Sbjct: 1037 LTILSIEVHAESRGDLRPDPRFDSVNVIALVVQND---DSFVAEVFVLLFSPDSIDQRNV 1093
Query: 894 DGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLK 953
DG + + E + I+ + DPD++ G++I+ S G++ ERA LG+ L
Sbjct: 1094 DG-LSGCKLSVFLEERQLFRYFIETLCKWDPDVLLGWDIQGGSIGFLAERAAQLGIRFLN 1152
Query: 954 DLSRI-----TEKNRQKRWMKNE------------------SDYEGR-------IIGRVI 983
++SR T + KR + N D GR + GR++
Sbjct: 1153 NISRTPSPTTTNNSDNKRKLGNNLLPDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIV 1212
Query: 984 FNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTK 1043
N WRL R E+ L+ Y+ E VL ++VPS Y L++W+ R+ +EY + +
Sbjct: 1213 LNAWRLIRGEVKLNMYTIEAVSEAVLRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRR 1272
Query: 1044 LSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTI 1103
+ + ++ +LD+INRTSELAR+FG+ ++ VLSRGSQ+RVES++LR A N +A+SP
Sbjct: 1273 ANLNLEIMSQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGN 1332
Query: 1104 KQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGE 1163
+Q ++ A E +PL+ EPES FY DPVIVLDFQSLYPSM+IAYN CFSTC+G++ ++
Sbjct: 1333 QQVASQPAMECVPLVMEPESAFYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHLKMN 1392
Query: 1164 TAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVK 1223
T G + L+ L N ++ +P + +V VRRG+LP VK
Sbjct: 1393 T---LGVSSYSLDLDVLQDL--NQILQ-TPNSVMYVPPEVRRGILPRLLEEILSTRIMVK 1446
Query: 1224 KSMK-MQNDEAV-KKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETL 1281
K+MK + EAV + ++RQL LKLIANVTYGYTAA FSGRMPC E+ADS+V GR TL
Sbjct: 1447 KAMKKLTPSEAVLHRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTL 1506
Query: 1282 ERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKL 1341
E+AI V N WNA+V+YGDTDSMFVL+ GR+ EAF +GQ+IA A+T NP PV LK+
Sbjct: 1507 EKAISFVNANDNWNARVVYGDTDSMFVLLKGRTVKEAFVVGQEIASAITEMNPHPVTLKM 1566
Query: 1342 EKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTH 1401
EKVY PC L TKKRYVG+ +ESP+Q +P ++AKGIETVRRD C A K + QSL F
Sbjct: 1567 EKVYHPCFLLTKKRYVGYSYESPNQREPIFDAKGIETVRRDTCEAVAKTMEQSLRLFFEQ 1626
Query: 1402 GDMSVVKRLVKATLSRLAETSLPVHELFFTREYH-GQAGYRPGASAPPNEIAKRIGMK-D 1459
++S VK + R+ + + + F +E G R + PP I MK D
Sbjct: 1627 KNISKVKSYLYRQWKRILSGRVSLQDFIFAKEVRLGTYSTRDSSLLPPAAIVATKSMKAD 1686
Query: 1460 RRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTR-DRSLRPHVAYYATRVXXXXXXXX 1518
R PR RV ++V G PG LV + P L D R + YY +
Sbjct: 1687 PRTEPRYAERVPYVVIHGEPGARLVDMVVDPLVLLDVDTPYRLNDLYYINKQIIPALQRV 1746
Query: 1519 XXXXGVDVFKWWNEL------GYNRTAQQREQTQSGGIEKYMSRERCAVCGVRTIVRSAV 1572
G D+ +W+ E+ + + + I+ + + C +CG + +
Sbjct: 1747 FGLVGADLNQWFLEMPRLTRSSLGQRPLNSKNSHKTRIDYFYLSKHCILCGEVVQESAQL 1806
Query: 1573 CPQCAHTQRA 1582
C +C + A
Sbjct: 1807 CNRCLQNKSA 1816
Score = 148 bits (358), Expect = 1e-33
Identities = 68/179 (37%), Positives = 107/179 (59%), Gaps = 9/179 (5%)
Query: 1 MTKPTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPC---PTQN 57
M P G ++ YS F+G+++ +VPV+RI+G G K CLHIH PY YIPC P ++
Sbjct: 22 MASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIHRALPYLYIPCSEIPLEH 81
Query: 58 PEPQLLYQIAASLDKALNIAMK-QATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFL-- 114
+ +A SL+ + +K A S QH++ +V+ FYGYH E ++K++L
Sbjct: 82 HKGVDGSTLALSLELEKALKLKGNAASKRQHIHDCEIVRAKKFYGYHSTEEAFVKIYLYP 141
Query: 115 ---YRPGLIKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFR 170
Y P + +A L +GA+LG++ QP+ESH+ F LQF +D+NL+GM + + ++FR
Sbjct: 142 YSSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGMGHVHISKMKFR 200
>UniRef50_Q6CTU9 Cluster: DNA polymerase; n=1; Kluyveromyces
lactis|Rep: DNA polymerase - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 1451
Score = 494 bits (1219), Expect = e-138
Identities = 272/712 (38%), Positives = 413/712 (58%), Gaps = 12/712 (1%)
Query: 826 ENCESADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDC-PNNHFLKKSLTGIIV 884
+N +++ +T +E+H + R D PDP D ++ +F+ V + P + + + I +
Sbjct: 607 KNNNASNRMTHFTMEIHVNTREDKFPDPKYDAVRMIFWKVQDGTFPFDLDITQEGVLIFL 666
Query: 885 VDSSSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERA 944
D S+ +V + +E+E I + LV DPDI+ GYEI +SWGY+++R
Sbjct: 667 DDVSTENSWKTADPSVHITAYYDELEMIYALEDLVRFFDPDILSGYEIHSSSWGYLIDRC 726
Query: 945 EI-LGLDVLKDLSRI--TEKNRQK-RWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYS 1000
DV +LSR+ + +++K RW + I GR + N+WR R L L Y+
Sbjct: 727 HKGHDYDVEDELSRVDYNQSSKKKDRWGYTHATAFS-ITGRQMLNIWRPLRSSLNLLDYT 785
Query: 1001 FENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRT 1060
EN + VL++R+P YSY ++++ + + + Y++T+L ++L+ +II +T
Sbjct: 786 LENIAFHVLHQRLPFYSYKTRTEFYESMDETSKRCLLFYWITRLRVNFKLLETQNIIGKT 845
Query: 1061 SELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFE 1120
E ARL G+ ++ VL RGSQ++VES ++R + I +SP+ Q +A E +PL+ E
Sbjct: 846 IEQARLIGIDFYSVLYRGSQYKVESFLIRLCKSEQFILISPSRMQVRNQKALECIPLVME 905
Query: 1121 PESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKL 1180
P S FY P++VLDFQSLYPS+++AYNYC+ST IGRV+++N + E G R IP L
Sbjct: 906 PSSAFYKSPLLVLDFQSLYPSIVMAYNYCYSTIIGRVESLNTKNN-EIGITRYDIPEDLL 964
Query: 1181 EALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEA-VKKAMH 1239
+ + I SP GI FVK +R+ VL +K +MK NDE + +
Sbjct: 965 TLI--SDYITISPNGIVFVKKELRKSVLAKMLKDILDTRFLMKSTMKELNDEHNLINMLD 1022
Query: 1240 SRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVI 1299
+RQ LKL+ANVTYGYT+A+FSGRMPC ++ADS+V GRETLERAI+++ W AKV+
Sbjct: 1023 NRQEALKLLANVTYGYTSASFSGRMPCSDIADSIVQTGRETLERAIEVIETTKEWGAKVV 1082
Query: 1300 YGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGF 1359
YGDTDS+FV +PG+S+ EAF IG+QIA+ +T NP P+ LK EKVY PC L TKKRYVGF
Sbjct: 1083 YGDTDSLFVYLPGKSKDEAFVIGRQIAEEITRQNPKPIELKFEKVYHPCFLVTKKRYVGF 1142
Query: 1360 MFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLA 1419
+ES Q++P ++AKGIETVRRDG PA K++ ++L +F D+S+VK + ++
Sbjct: 1143 SYESEYQKEPKFDAKGIETVRRDGTPAQQKIVEKALRIMFETTDLSMVKEYLIGEFDKII 1202
Query: 1420 ETSLPVHELFFTREYHGQAGYRPGASAPPN-EIAKRIGMKDRRAIPRTGWRVSWLVTCGA 1478
+ + + F RE Y+ +APP +IA ++ +D R P+ RV ++V G
Sbjct: 1203 TGRVNIQDFCFAREVK-LGHYKSEKTAPPGAQIAMQMMEEDARTEPQYKQRVPYVVKMGK 1261
Query: 1479 PGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWW 1530
G L +P+ R ++ R YY + GVD+ W+
Sbjct: 1262 IGETLSSRCLSPEAFLRSKTSRLDYTYYIVKNIIPPLQRFFQLVGVDIMDWY 1313
Score = 95.1 bits (226), Expect = 1e-17
Identities = 55/171 (32%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 11 TYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQ-NPEPQLLYQIAAS 69
T G QVPVLR +G G+K +H HG+FPY +I N + ++ S
Sbjct: 38 TSKSLPGLRFVQVPVLRFYGCLSTGHKVLIHCHGIFPYIFIKYDGHSNDKASVIRNRCTS 97
Query: 70 LDKALNIAM---------KQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLI 120
L K L M K+ +S +++ +S+VKG+PFYGYH Y K+ L
Sbjct: 98 LHKILETRMIETFTKTDFKEKLTSLKYIANVSVVKGVPFYGYHVGYEPYYKITLLNGSYS 157
Query: 121 KQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFRK 171
+ EL G I E+H+ + LQ D+NLFG + L FR+
Sbjct: 158 NKLSELLRDGRIFTSKVDVFEAHIPYLLQMMADYNLFGCGWLKLSKCYFRQ 208
>UniRef50_Q6FK10 Cluster: DNA polymerase; n=1; Candida glabrata|Rep:
DNA polymerase - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 1481
Score = 490 bits (1208), Expect = e-136
Identities = 279/774 (36%), Positives = 428/774 (55%), Gaps = 27/774 (3%)
Query: 824 SIENCESA-DFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGI 882
SI+ ES D LT +E+H + RGD+ PDP D + +F+ V +D + L GI
Sbjct: 637 SIKRSESIHDNLTHFSLEIHVNTRGDLLPDPRKDEVSVIFWKVDSDT-FPFSIDLQLEGI 695
Query: 883 IVVDSSSRKYL----DGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWG 938
+ + R+ L + VP++ +E D + L+ + DPD++ GYEI +SWG
Sbjct: 696 MYTNKLERENLIETLESISGGVPIMEYEDEFSMFDALTDLILLFDPDLLSGYEIHNSSWG 755
Query: 939 YVLERA-EILGLDVLKDLSRITE----KNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHE 993
Y+ ER+ + ++ ++SR+ K R K S I GR + N+WRL R E
Sbjct: 756 YIFERSLSVHKFNIANEISRVNMGAQFKLRDSWGFKKSSGIS--ITGRYVLNIWRLLRKE 813
Query: 994 LALSSYSFENCMYEVLNERVPSYSYAQLSDWWCD--ESKMLRWIPVEYYLTKLSGTVRML 1051
+A++ YSFEN ++ +L R+P YS + L+ W + L+ + YYLT++ + +L
Sbjct: 814 IAVTQYSFENMVHLLLKIRLPKYSCSHLTSLWSNFKTGNELKTF-LNYYLTRVRLNIGIL 872
Query: 1052 QKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRA 1111
+K+ E ARL G+ + V +RGSQ++VES ++R + N I LSP+ +
Sbjct: 873 KKISFTLNVMEEARLIGIDFQSVYNRGSQYKVESFLIRICKSENYILLSPSKVAVQKQKP 932
Query: 1112 PETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAW 1171
E +PL+ EPES FY P++VLDFQSLYPS+M YNYC+ST +GRV+ ++G T G
Sbjct: 933 LECVPLVMEPESAFYKSPLLVLDFQSLYPSIMSGYNYCYSTMMGRVRELDG-TKRTLGVT 991
Query: 1172 RLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMK-MQN 1230
+ L+ L + I +P G+ + K +R+ L +KK++ + +
Sbjct: 992 NFELKSELLKKLRDD--IRIAPNGVIYAKEHLRKSTLSKMLSEILEIRFMIKKTISDLGS 1049
Query: 1231 D-EAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVR 1289
D +A+KK + S+QL LKL+ANVTYGYT+A+FSGRMPC ++ADS+V GRETLE+A+K++
Sbjct: 1050 DHQALKKLLESKQLALKLLANVTYGYTSASFSGRMPCSDLADSIVQTGRETLEKAVKMIE 1109
Query: 1290 ENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCI 1349
+W AKV+YGDTDS+FV +PG+++ +AF IG +I++++TA NP P+ LK EKVY PCI
Sbjct: 1110 STASWGAKVVYGDTDSLFVYLPGKTKEDAFRIGAEISNSITASNPKPITLKFEKVYFPCI 1169
Query: 1350 LQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKR 1409
L +KKRYVG+ + S Q P ++AKGIETVRRDG PA K++ +L LF D+S VK
Sbjct: 1170 LLSKKRYVGYSYLSSSQLNPHFDAKGIETVRRDGTPAQQKVVENALRILFETKDLSKVKN 1229
Query: 1410 LVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNE-IAKRIGMKDRRAIPRTGW 1468
V T +++ ++ + + F +E Y+ ++ PP +AKR+ +D RA P+
Sbjct: 1230 YVVDTFTKIRSGNISIQDFCFAKEIK-LGHYKSESTMPPGAVVAKRLKKQDSRAEPQYKE 1288
Query: 1469 RVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFK 1528
R+S+LV G G L + E + YY T+ G+ V
Sbjct: 1289 RLSYLVVKGKSGQILRERCVSVSEYFSNDHFALDSEYYITKTLIPPLDRLFNIVGISVSD 1348
Query: 1529 WWNELGYNRTAQQREQTQSGGIEKYMSRERCAVCGVRTIV-RSAVCPQCAHTQR 1581
W E + T G + + RC C T+ S +C C ++
Sbjct: 1349 WNQEGPMFVEGSIKPYT---GADNIPTSTRCKACEQNTVSGDSYLCDNCVSNEK 1399
Score = 90.2 bits (214), Expect = 4e-16
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 22/207 (10%)
Query: 1 MTKPTAGLDVTY-SEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPE 59
M PT+ LD T+ S +VPV+RIFG + G++ H+HG+FPYF++ + +
Sbjct: 33 MAYPTS-LDRTHGSSLPLKKFHKVPVIRIFGCLRTGHQLLCHVHGIFPYFFVKYDGKEDD 91
Query: 60 PQLLY-----QIAASLDKALNIAMK---------QATSSNQHVY--KISLVKGLPFYGYH 103
++ ++ L++ L MK T+ N+ VY +S+VKG+PFYGYH
Sbjct: 92 TSIIINEKCAKLHQLLEQILRDKMKSKGSRNDKQDETNLNELVYIANVSVVKGVPFYGYH 151
Query: 104 DKEHLYLKVFLYRPGLIKQAVELFSSGAIL--GQTFQPHESHLNFTLQFFIDFNLFGMSD 161
+ K+ L P L +Q + +L GQ + +ES + L+F DFNLF S
Sbjct: 152 VGWTPFYKISLLNPSLSEQVCNIIREQNVLQNGQN-EVYESQFPYLLKFTADFNLFACSW 210
Query: 162 IDLQSVQFRKSGFSQKSN-EVLYDTKE 187
I+ + V FR ++ N + + TKE
Sbjct: 211 INFKKVYFRAPVLNEMLNMDEIMMTKE 237
>UniRef50_Q75F27 Cluster: DNA polymerase; n=1; Eremothecium
gossypii|Rep: DNA polymerase - Ashbya gossypii (Yeast)
(Eremothecium gossypii)
Length = 1463
Score = 489 bits (1207), Expect = e-136
Identities = 287/771 (37%), Positives = 437/771 (56%), Gaps = 27/771 (3%)
Query: 823 VSIENCESADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNN-HFLKKSLTG 881
+S E ES L + +E+H R +M P+P D IK + +S+ D P + ++ S G
Sbjct: 616 MSNEARESGPQLLHLSMEIHVDTRRNMLPNPRTDEIKMICWSI--DGPQSVGTMELSTDG 673
Query: 882 IIVV----DSSSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSW 937
++V D+ ++ ++ V + ++E E I E KLV I DPDI+ +SW
Sbjct: 674 LLVSLNENDAIYKRIIEEACGKTRVAFFTSEYELITEFAKLVLIIDPDILQDMN-HKSSW 732
Query: 938 GYVLERAEIL-GLDVLKDLSRITEKNRQ---KRWMKNESDYEG-RIIGRVIFNVWRLFRH 992
GY+L R E+ +D +SR++ +R W N S G +I GR + NVWR R
Sbjct: 733 GYILARVELSHNIDFGLLISRLSRDDRSGLASEW--NYSHSAGIKIAGRHMLNVWRKMRT 790
Query: 993 ELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRW-IPVEYYLTKLSGTVRML 1051
E+ L+ Y+ EN Y +L+ER+P +++ LS +W +S I + Y L ++ +R+L
Sbjct: 791 EVNLAKYNIENVAYHLLHERLPKFTHETLSGFWRTKSDRTSIKIVINYCLERVRCNIRLL 850
Query: 1052 QKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRA 1111
+I+RT E ARL G+ ++ VLSRGSQ+RVES++ R A+ +L+ +SP RA
Sbjct: 851 NLKQVISRTVEQARLIGIDFYSVLSRGSQYRVESVLARLAKAEHLMLISPGKGDLRHQRA 910
Query: 1112 PETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNIN-GETAYEFGA 1170
E +PLI EP+ FY+ PV+VLDFQSLYPS++IAYNYC++T +GR + + GE + G
Sbjct: 911 LECVPLILEPDPTFYTSPVLVLDFQSLYPSIIIAYNYCYTTILGRTREMTAGEN--KIGI 968
Query: 1171 WRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMK-MQ 1229
+ + L+ L N I +P G+ +VK ++R+ +L +K+++ M
Sbjct: 969 TTNILKPNILQLLGDNITI--APNGVTYVKQNIRKSILAKMLSDILDTRVLLKRTISDMH 1026
Query: 1230 N-DEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLV 1288
N + + + +RQL LKL+ANVTYGY +A++SGRMPC ++ADS+V GRETL AI+++
Sbjct: 1027 NGSKRLLSTLDNRQLALKLLANVTYGYASASYSGRMPCSDIADSIVHTGRETLRAAIQMI 1086
Query: 1289 RENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPC 1348
+ W A+V+YGDTDS+FV +PG+SR +AF+IG I+DAVTA NP P+ LK EKVY PC
Sbjct: 1087 EKEDKWGARVVYGDTDSLFVHLPGKSREQAFKIGAAISDAVTAANPNPIKLKFEKVYHPC 1146
Query: 1349 ILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVK 1408
IL +KKRYVG +E QE P Y+AKGIETVRRDG PA K++++SL LF D+S +K
Sbjct: 1147 ILLSKKRYVGHAYEHASQEVPRYDAKGIETVRRDGHPAQRKIIQRSLEILFRTKDLSQLK 1206
Query: 1409 RLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPP-NEIAKRIGMKDRRAIPRTG 1467
+ ++ S+P+ + F++E Y+ A+APP ++A+R+ D A P+
Sbjct: 1207 AYIVNQFWKIMTGSVPIGDFCFSKEVR-LGFYKSEAAAPPAAQVARRMMENDSMAEPQYR 1265
Query: 1468 WRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVF 1527
RVS++V PG L PQ+ D L YY T+ G+D+F
Sbjct: 1266 ERVSYVVAKSRPGTLLADRCIAPQDFLADPRLELDAEYYITKTLIPPLNRLLQTVGLDLF 1325
Query: 1528 KWWNELGYNRTAQQREQTQSGGIEKYMSRERCAVCGVRTIVRSA--VCPQC 1576
W+ E+ + + S + + RC C ++ +C C
Sbjct: 1326 DWYREMPRPSSYKHVGSGASDTLHHVLKSNRCLCCKREATTKNGLQLCDSC 1376
Score = 85.0 bits (201), Expect = 2e-14
Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 25/190 (13%)
Query: 4 PTAGLDVTYS-EFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQL 62
P LD +S + G VP++R +G G+ H+HG PY +I C P +L
Sbjct: 49 PPTSLDPKHSLSWPGKAFSTVPIIRFYGKLTSGHNILSHLHGALPYLFISCDA--PPDEL 106
Query: 63 LYQIAAS---LDKALNIAM-------------KQATSSN------QHVYKISLVKGLPFY 100
Y A+ L L +A+ KQ+ S+ ++V +S+VKG+PFY
Sbjct: 107 RYNSKATCHRLHVLLELALLNTSTKSHGSESAKQSDSTEDNIECLRYVANVSVVKGVPFY 166
Query: 101 GYHDKEHLYLKVFLYRPGLIKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMS 160
G++ ++ K+ L P + G+ILG++ +E+H+ + LQ DFNL+G +
Sbjct: 167 GFNVGWSVFYKISLLNPRFVTLLANKLRDGSILGRSVSVYEAHIPYLLQTSADFNLYGCA 226
Query: 161 DIDLQSVQFR 170
++L FR
Sbjct: 227 YLNLTDCYFR 236
>UniRef50_Q6BUR9 Cluster: DNA polymerase; n=2; Fungi|Rep: DNA
polymerase - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 1588
Score = 480 bits (1183), Expect = e-133
Identities = 289/839 (34%), Positives = 458/839 (54%), Gaps = 38/839 (4%)
Query: 767 VVRPPTSEQVKKWINEQKALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSSIVSIE 826
V PP+ +++KW+ ++A + I + N+ + ++I+
Sbjct: 681 VAEPPSKVEIQKWVAVEEAKMKYKRSKFRSQIEPPITQTNDYK-FSYRSEKIS------R 733
Query: 827 NCESADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKS--LTGIIV 884
S + LT+ +E+H + D+ P+P VDPI +FY+ + +NH K+ GI++
Sbjct: 734 RPNSFNSLTNFHLEIHVNTHNDLLPNPDVDPISVIFYTFSD---SNHMFDKNNNKVGILI 790
Query: 885 VDS--SSR----KYLD---GCVFNVPVIYV-SNEIETIDEVIKLVNIHDPDIMCGYEIEM 934
S R K L+ + P + + S+E I+++I+LV DPDI+ GYEI
Sbjct: 791 YHEPGSQREDFAKQLEKVSSFLVEKPAVAIFSDEKSMINQLIRLVECFDPDILSGYEINA 850
Query: 935 NSWGYVLER-AEILGLDVLKDLSRITEKNRQK---RWMKNESDYEGRIIGRVIFNVWRLF 990
SWGYV+ER +++L + SR K+ K RW + +I GR I NVWRL
Sbjct: 851 LSWGYVIERFRNAYDINLLFEFSRCKFKSNGKFGDRWGYTHTS-AFKINGRHILNVWRLL 909
Query: 991 RHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRM 1050
R EL+L++YS EN Y +L++ +P Y QLS W+ + +YYL ++ +++
Sbjct: 910 RSELSLTNYSLENMSYHLLHQTLPRYLNFQLSQWYYGNDFLELLSVFKYYLRRVQLIMKI 969
Query: 1051 LQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMR 1110
+ ++I R E +RL G+ + RGSQF+VES++ R + N++ S + +Q MR
Sbjct: 970 IDIQELITRNVEQSRLIGIDFNSNFYRGSQFKVESILCRLTKAENILLNSVSKQQVHEMR 1029
Query: 1111 APETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGA 1170
E +PLI EP+S FY P+IVLDFQSLYPS+MIAYNYC+ST +G++ +
Sbjct: 1030 PLECIPLIMEPDSNFYKSPLIVLDFQSLYPSIMIAYNYCYSTILGKLHGFSPRKNIIGYL 1089
Query: 1171 WRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKM-Q 1229
L++P ++ KN ++ SP G FVK+S+R+ +L VK MK+ +
Sbjct: 1090 KNLKLPPGLVDLFAKNDGLNISPNGYVFVKSSIRKSMLAKMLEEILNARINVKSVMKLFK 1149
Query: 1230 NDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVR 1289
+D + K +SRQL LKLIANVTYGYT+A FSGRMP ++AD++V+ GRE L +++ L+
Sbjct: 1150 DDPELIKLYNSRQLALKLIANVTYGYTSATFSGRMPNSDIADAIVSTGREILSQSVNLI- 1208
Query: 1290 ENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCI 1349
E T + AKV+YGDTDS+FV +PG+++ +AF+IG ++A +T P P+ LK EKVY PC+
Sbjct: 1209 ELTNYGAKVVYGDTDSLFVYLPGKTKQDAFKIGNELASFITDKFPDPIKLKFEKVYHPCV 1268
Query: 1350 LQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKR 1409
L KKRYVG+ +E DQ++P ++AKGIET+RRDG PA K++ +++ LF ++S++K+
Sbjct: 1269 LLAKKRYVGYSYEYEDQQEPKFDAKGIETIRRDGIPAQQKMVEKTIRILFDTKNLSLIKK 1328
Query: 1410 LVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEI-AKRIGMKDRRAIPRTGW 1468
++ + + + F +E Y+ A PP I A R KD R P+
Sbjct: 1329 YTMEQFYKILINKVSIKDFCFAKEVR-FGTYKNEAHLPPGAIVANRNVNKDPRNEPQYRE 1387
Query: 1469 RVSWLVTCGAPGVPLVRLARTPQELTRD-RSLRP---HVAYYATRVXXXXXXXXXXXXGV 1524
RV ++V + + + +P++ + +L+P YY TRV GV
Sbjct: 1388 RVPYVVFQDSSKIRVKDRCISPEDFIKSYNTLKPLSLDNEYYITRVLIPPLERVFNLIGV 1447
Query: 1525 DVFKWWNELGYNRTAQQREQTQSGGIEKYMSRERCAVCG--VRTIVRSA-VCPQCAHTQ 1580
D+ W+ EL + K++ CA CG ++ RS +C QC + +
Sbjct: 1448 DIKGWYKELPKFNHELFETKNNIFQFAKFIKLNSCACCGSKLKEYSRSKYICGQCLNNE 1506
Score = 50.0 bits (114), Expect = 5e-04
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 36/171 (21%)
Query: 36 YKACLHIHGVFPYFYIPC-------PTQNPEPQLLYQIAASL---------------DKA 73
Y +H+H +PY Y+ C ++N QL+ + SL ++
Sbjct: 72 YNVLVHVHNYYPYLYVDCFENEALLRSENYINQLVEYLENSLQQSFRRKKGEEEEEEEET 131
Query: 74 LNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVELF------ 127
+++ + + + K+++ KG P YGY L+ K+ L P + LF
Sbjct: 132 IDVDVDSGGGERKFIAKVAICKGSPIYGYQVGYKLFYKISLLSPLYKTRLTTLFHDKNIN 191
Query: 128 --------SSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFR 170
G +E+H+ + LQF DFNLFG +++ + FR
Sbjct: 192 ICEFSSSFDKGTKKSYAVNVYEAHIPYLLQFLADFNLFGCGWLEIDNTYFR 242
>UniRef50_A3LPZ9 Cluster: DNA polymerase zeta; n=1; Pichia
stipitis|Rep: DNA polymerase zeta - Pichia stipitis
(Yeast)
Length = 1489
Score = 476 bits (1174), Expect = e-132
Identities = 281/783 (35%), Positives = 433/783 (55%), Gaps = 31/783 (3%)
Query: 819 NSSIVSIENCESADFLTSMVIEVHTSVRGD-MHPDPAVDPIKAVFYSVINDCPNNHFLKK 877
NS V N + + L+ +E H + PDP DP+ + Y +D N K
Sbjct: 653 NSEKVKRRN-DGFNRLSDFHLEAHVNTNDPKFSPDPLKDPVSIISY-YFDDTNNMFENSK 710
Query: 878 SLTGIIVVDSSS------RKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYE 931
+ +GI++ + + R + + NE+ ++ ++ ++ DPDI+ GYE
Sbjct: 711 NRSGILIFNDNMIDVKMLRSAMSFLENGTEIEVFDNELHMVNRLVSIIEKFDPDILSGYE 770
Query: 932 IEMNSWGYVLERAE-ILGLDVLKDLSRITEKNRQK---RWMKNESDYEGRIIGRVIFNVW 987
+ +SWGY++ER + +++L D SR + K K RW + +I GR I NVW
Sbjct: 771 VNASSWGYLIERFRTVYEVNLLADFSRGSYKTNGKFGDRWGYTHTS-NIKINGRHIINVW 829
Query: 988 RLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPV-EYYLTKLSG 1046
RL RHEL+L+SYS EN Y +L++ +P +S QLS+W +K + V YY +++
Sbjct: 830 RLLRHELSLTSYSLENVSYHLLHQSLPKFSNFQLSEW-LRSNKFQNILTVFRYYQRRIAL 888
Query: 1047 TVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQR 1106
+++++ +++ R E +RL G+ + RGSQFR+ES++ R A+ NL+ SP+ +Q
Sbjct: 889 VIKIIEVQELVTRNVENSRLIGIDFNSNFYRGSQFRIESILSRLAKSENLLLNSPSKQQV 948
Query: 1107 STMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAY 1166
M+ E +PLI EP S FY P++VLDFQSLYPS+MIAYNYCFST +GR+ N N
Sbjct: 949 FEMKPIECIPLIMEPNSNFYKSPLVVLDFQSLYPSVMIAYNYCFSTLLGRLHNFN-PNKN 1007
Query: 1167 EFGAWR-LRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKS 1225
E G + L +P ++ + K + I SP G FVK++VR+ +L VK+
Sbjct: 1008 EIGYLKNLSLPPGLVDLMEKENAITLSPNGYMFVKSNVRKSILAKMLEEILSTRVKVKEV 1067
Query: 1226 MKM-QNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERA 1284
MK+ ++D + + +RQL LKLIANVTYGYT+A FSGRMP +++D++V+ GRE L ++
Sbjct: 1068 MKLFRDDRELTRLYDARQLALKLIANVTYGYTSATFSGRMPNPDISDAIVSTGREILSKS 1127
Query: 1285 IKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKV 1344
I+++ N + AKV+YGDTDS+F+ PG+SR EAF IG+ IA +T P P+ LK EKV
Sbjct: 1128 IEIIN-NGNFGAKVVYGDTDSLFIYFPGKSRSEAFSIGRHIAQYITDQFPDPIKLKFEKV 1186
Query: 1345 YQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDM 1404
Y PC+L TKKRYVG+ +E +Q P ++AKGIETVRRDG PA K++ +SL LF ++
Sbjct: 1187 YHPCVLLTKKRYVGYSYEYENQTSPKFDAKGIETVRRDGIPAQQKIVEKSLRILFETKNL 1246
Query: 1405 SVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEI-AKRIGMKDRRAI 1463
S VK V+ +++ + V + F +E Y+ PP I A++ +D R
Sbjct: 1247 SRVKEYVQKQFHKISINKVSVIDFCFAKEVR-YGTYKNEKYLPPGAIVAQKKVDEDHRKE 1305
Query: 1464 PRTGWRVSWLVTCGAPGVPLVRLARTPQE-LTRDRSLRPHV---AYYATRVXXXXXXXXX 1519
P+ RV ++V + +P+E + ++ P++ YY TRV
Sbjct: 1306 PQYRERVPYVVVSDPTKTRIKDRCISPEEFIDSYKTTNPYILDYEYYITRVLIPPLERIF 1365
Query: 1520 XXXGVDVFKWWNELGYNRTAQQREQTQSGGIEKYMSRERCAVCG--VRTIVRSAVCPQCA 1577
GVDV W+ EL Q+ I + + C CG +++ S +C C
Sbjct: 1366 NLIGVDVKGWYREL---PKFQKNSNKGILNISRNIRTHACLGCGDKLQSSTSSYLCSSCR 1422
Query: 1578 HTQ 1580
H +
Sbjct: 1423 HNE 1425
Score = 48.4 bits (110), Expect = 0.002
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 30/169 (17%)
Query: 19 DIKQVPVLRIFG----PAKDG---YKACLHIHGVFPYFYIPC--------PTQNPEPQLL 63
++ QVPV+RI+G P + +H+H +PY Y+ C ++ ++
Sbjct: 35 NVNQVPVIRIYGTIAVPKTTPNLVFNVLVHVHNYYPYLYVDCFEADKRKLASKEHIDNVI 94
Query: 64 YQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPG----- 118
+ AS+ + + + + + + +S+ +G P YG+ L ++ L P
Sbjct: 95 NYLEASMIDSFKHDHQNSRTRRKFIAGVSVCRGTPIYGFQLGHRLVYRISLLSPKYKTRL 154
Query: 119 ---LIKQAVELFSSGAILGQTFQP------HESHLNFTLQFFIDFNLFG 158
L ++ ++L SS + +P +E+H+ + LQF DFNLFG
Sbjct: 155 SKLLYERKIDL-SSLELDSNLKRPKKKALVYEAHIPYFLQFLADFNLFG 202
>UniRef50_Q6CB61 Cluster: DNA polymerase; n=1; Yarrowia
lipolytica|Rep: DNA polymerase - Yarrowia lipolytica
(Candida lipolytica)
Length = 1338
Score = 472 bits (1164), Expect = e-131
Identities = 269/756 (35%), Positives = 423/756 (55%), Gaps = 32/756 (4%)
Query: 834 LTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGIIVVDSSSRKYL 893
LT M +EVH + R ++PDP +DPI V + ++ P+ G+I+ +
Sbjct: 528 LTVMSMEVHVNTRKGLNPDPDLDPILFVVWHMLGG-PS---------GVIINAEDCPDFT 577
Query: 894 DGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLK 953
+ + P V E E I + K+V DPDI+ G+E++ +SWGYV +R + +
Sbjct: 578 N--IIEAPSTVVKTECEMITHLQKMVENFDPDILTGFEVQASSWGYVQDRCKTMLYPC-- 633
Query: 954 DLSRITEKNRQKR---WMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLN 1010
+ R+ + W ++ +++GR + N+WR+ R E++L Y+ EN ++ VL+
Sbjct: 634 EFGRVQHHKMSSKIDTWGARKASGV-KVVGRHVLNLWRMIRGEVSLLKYTLENVVFHVLH 692
Query: 1011 ERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQ 1070
ER+P Y++ L++ C S R + VEY T+ + +++L L+I++RT+E AR+ G+
Sbjct: 693 ERIPFYTHDTLTEM-CVGSLSDRKLLVEYKCTRSNYNLQLLSTLEIVSRTAEQARVVGID 751
Query: 1071 WWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPV 1130
+ V +RGSQ++VES + R + N + SP+ +Q A E + L+ EPESR Y+ PV
Sbjct: 752 FSSVYTRGSQYKVESFLARLTKSENFMLASPSREQVGQQNALECIALVMEPESRLYTSPV 811
Query: 1131 IVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIH 1190
+VLDFQSLYPS+++A+NYC+STC+G+ + + G +L S ++ L+ +
Sbjct: 812 LVLDFQSLYPSVILAHNYCYSTCLGKWTDFEKD-GNTLGTEKLFYKPSLVKRLLTKDDVT 870
Query: 1191 WSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDE-AVKKAMHSRQLGLKLIA 1249
SP G+ FVK +R +L VK + K+ D + ++ H+RQL LKL+A
Sbjct: 871 ISPNGLVFVKPHIRVSLLARMLGEILETRFMVKDTAKLDRDNVSFQRLNHNRQLALKLVA 930
Query: 1250 NVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVL 1309
NVTYGYT+A+FSGRMPC E+AD++V GRETLE+ I ++ + W AKV+YGDTDS+FV
Sbjct: 931 NVTYGYTSASFSGRMPCAEIADAIVQSGRETLEKCIDVIHGSDKWAAKVVYGDTDSLFVC 990
Query: 1310 VPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKP 1369
+PGR++ EAF+IG +IAD +T+ NP P+ L+ EKVY PC+L +KKRYVG+ +E Q P
Sbjct: 991 LPGRTKDEAFKIGTEIADTITSANPAPMKLQFEKVYLPCMLISKKRYVGYKWEYSKQMYP 1050
Query: 1370 TYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELF 1429
++AKGIETVRRDG PA K+ ++L LF D+S+VK + +++ + + +
Sbjct: 1051 IFDAKGIETVRRDGTPAAQKIEEKALRILFDTADLSLVKSYLYEQWTKILTGKVSIQDFC 1110
Query: 1430 FTREYH-GQAGYRPGASAPPN-EIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLA 1487
F +E GQ Y+ G P +I+ D R P+ R+ ++V G P L+
Sbjct: 1111 FAKEVKLGQ--YKEGGVLPAGAKISAEKMAVDMRFEPQYKERIPYVVVAGPPKSRLIDRC 1168
Query: 1488 RTPQELTRD-RSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNELGYNRTAQ-----Q 1541
+P+EL R+ SL YY + G V KW+ E+ R +
Sbjct: 1169 VSPEELVRNANSLILDADYYIHKTLIPPLDRFFNCVGASVLKWYEEMPKKRRYEFYQTVS 1228
Query: 1542 REQTQSGGIEKYMSRERCAVC-GVRTIVRSAVCPQC 1576
R +T ++ Y C VC +T S +C C
Sbjct: 1229 RAKTNQTTLKSYAVSNSCIVCKTAQTSGLSKLCATC 1264
Score = 109 bits (262), Expect = 6e-22
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
Query: 19 DIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNIAM 78
D+ +VPVLRIFG DG +C H+H VF YFYIP + P A + + +N+ +
Sbjct: 38 DLHRVPVLRIFGGTSDGLSSCAHVHNVFQYFYIPYTGPSLSPADSEPFIADMYRRINLQL 97
Query: 79 KQATSSNQHVYK-------ISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVELFSSGA 131
+ + + + + I L K PFYGYH+ YLK+ + P + V++F +G
Sbjct: 98 RSKRTRGEKLPEECSFLANIVLCKATPFYGYHEGWRYYLKIVVVDPSHVGMLVDMFRNGV 157
Query: 132 ILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFRKSGFSQKS 178
+ ESHL++ LQFF D+NL G ++ R+ G KS
Sbjct: 158 FGWDHSRVFESHLSYILQFFCDYNLHGCGWMEASRYMMRREGMISKS 204
>UniRef50_A5DZN4 Cluster: DNA polymerase; n=2; Saccharomycetales|Rep:
DNA polymerase - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 1803
Score = 466 bits (1150), Expect = e-129
Identities = 294/838 (35%), Positives = 446/838 (53%), Gaps = 50/838 (5%)
Query: 765 QPVVRPPTSEQVKKWI--NEQKALQLLSQFSSEQAISK-NMDDFN---NSQALGLNEDEI 818
Q + PPT + V W+ EQK + ++ S+ K + DF NS+ + DE
Sbjct: 912 QYLPEPPTKKSVANWVKEEEQKNINKRQRYRSQIDSGKTQLYDFKFSYNSEKVTRKPDEF 971
Query: 819 NSSIVSIENCESADFLTSMVIEVHTS-VRGDMHPDPAVDPIKAVFYSVIND-CPNNHFLK 876
N +LTS +E+H S + DP DPI +FYS ++ C
Sbjct: 972 N-------------YLTSFHLEIHASPPNSKLVADPLRDPILMIFYSFDDENCMFEQCNY 1018
Query: 877 KSLTGIIVVDS--SSRKYLD--GCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEI 932
KS G+++ ++ + D G +E E I +++LVNI DPDI+ GYE+
Sbjct: 1019 KS--GVLIFNNLGLNPHLFDRLGNSLGQRFEIYDDEQEMIMRLVELVNIFDPDILSGYEV 1076
Query: 933 EMNSWGYVLERAE-ILGLDVLKDLSRITEKNRQK---RW-MKNESDYEGRIIGRVIFNVW 987
SWGY++ER + ++ DLSR T+++ K RW + ++ E I GR I NVW
Sbjct: 1077 NSMSWGYIIERCRLVFETTIMSDLSRGTQRSNGKFGDRWGYTHTANIE--INGRHILNVW 1134
Query: 988 RLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGT 1047
R+ + +L+L+SY+ EN Y +L+ VP Y QLS WW + ++ YY+ ++ T
Sbjct: 1135 RILKSDLSLTSYTLENVCYHLLHVSVPRYLAHQLSQWWQSGNFQNLYVVASYYMRRIELT 1194
Query: 1048 VRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRS 1107
++++ ++I R E +RL G+++ RGSQ++VES++ R +P +L+ SP+ Q
Sbjct: 1195 MKIIFVQELITRNVEHSRLIGIEFNSNFYRGSQYKVESILARITKPESLLLNSPSKYQVH 1254
Query: 1108 TMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYE 1167
MR E +PL+ EP+S FY P+IVLDFQSLYP++MIAYNYCFST IG++ N +
Sbjct: 1255 EMRPIECIPLVMEPKSSFYKSPLIVLDFQSLYPTIMIAYNYCFSTLIGKLHNFKPKKNNV 1314
Query: 1168 FGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMK 1227
L +P ++ L + I+ SP G FVK+ VR+ VL K MK
Sbjct: 1315 GYLKNLDLPPGMIDLLKNDDAINVSPNGFAFVKSHVRKSVLAKMLEEILNIRIKTKSVMK 1374
Query: 1228 MQNDEA-VKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIK 1286
M D+ +KK +SRQ LKLIANVTYGY +A FSGRMP ++AD++V+ GRE L ++I+
Sbjct: 1375 MFGDDTELKKLYNSRQTALKLIANVTYGYASATFSGRMPNPDIADAIVSSGREILGKSIE 1434
Query: 1287 LVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQ 1346
L+ EN + AKV+YGDTDS+FV PG+S+ EAF++G++IA VT P P+ L+ EKVY
Sbjct: 1435 LI-ENGGYGAKVVYGDTDSLFVYFPGKSKAEAFKLGREIAKLVTDYFPDPIKLQFEKVYH 1493
Query: 1347 PCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSV 1406
PC+L KKRYVG+ +E+ +Q P ++AKGIETVRRDG PA K+ ++L LF ++S
Sbjct: 1494 PCVLLAKKRYVGYSYETENQVNPKFDAKGIETVRRDGIPAQQKITERALRILFETQNLSK 1553
Query: 1407 VKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEI-AKRIGMKDRRAIPR 1465
VK ++ + +++ F +E Y+ PP + A + D R+ P+
Sbjct: 1554 VKEFTVKQFYKIMANKISINDFCFAKEVK-YGNYKDERYLPPGAVLASKAVEDDPRSEPQ 1612
Query: 1466 TGWRVSWLVTCGAPGVPLVRLARTPQELTRDRS----LRPHVAYYATRVXXXXXXXXXXX 1521
R+ +LV + P++ + S L YY TRV
Sbjct: 1613 YKERIPYLVIRDPLKERIKDRVIFPEDFIKSFSTSNPLMLDYEYYITRVLIPPLERIFNL 1672
Query: 1522 XGVDVFKWWNELGYNRTAQQREQTQSGGIEKYMSRERCAVCGVRTIVRSAVCPQCAHT 1579
G DV W+ E+ +T + + + C CG R + VC +C ++
Sbjct: 1673 MGADVRGWYREM--PKTLGLTDNITN------PFNDTCLTCGGRLDGQMYVCSKCRYS 1722
>UniRef50_A5DLL4 Cluster: DNA polymerase; n=1; Pichia
guilliermondii|Rep: DNA polymerase - Pichia
guilliermondii (Yeast) (Candida guilliermondii)
Length = 1593
Score = 461 bits (1136), Expect = e-128
Identities = 290/839 (34%), Positives = 455/839 (54%), Gaps = 35/839 (4%)
Query: 762 YVIQPVVRPPTSEQVKKWI-NEQKALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINS 820
Y+ + V PP S +K W+ E+K +Q E S F S L L+ +S
Sbjct: 700 YLWEYAVTPPLSASIKDWLATEKKKRNTYTQI--EHPNSGTAAKFKYSYRLELSSRRPDS 757
Query: 821 SIVSIENCESADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLT 880
I LT+ E+H + + PDP ++ + A+FY D N F K +T
Sbjct: 758 FIR----------LTNFHAEIHVNTDSNSLPDPELNLVSAIFYHF--DDANLMFDKIPVT 805
Query: 881 GIIVV-DSSSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGY 939
G++V ++ + +L ++ + +E +D ++ LV DPDI+CGYEI +SWGY
Sbjct: 806 GVLVNRETCNNVHLLKSAVDMKIETFEDEKSMVDRLLFLVEAFDPDILCGYEINASSWGY 865
Query: 940 VLERAEIL-GLDVLKDLSRITEKNRQK---RWMKNESDYEGRIIGRVIFNVWRLFRHELA 995
++ER +++L LSR T K+ K RW + +I GR + NVWR+FR +
Sbjct: 866 LVERFRAAYDINLLPLLSRCTFKSNGKFGDRWGYTHTSAL-KINGRHLLNVWRVFRSNVT 924
Query: 996 LSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLD 1055
L+SYS EN ++ +L++ + S LS W+ ++ + YY+ ++ ++L +
Sbjct: 925 LTSYSLENVVFHILHQTIAKCSNRSLSKWFRSDNASKLLFVLNYYMQRILLVQKILDVRE 984
Query: 1056 IINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETL 1115
II + E AR G+ ++ V RGSQ++VES++ R ++ +L+ SP+ Q S M+ E +
Sbjct: 985 IITKNVEEARFIGVDFYSVFFRGSQYKVESILSRISKVESLLLNSPSKTQVSNMKPLEAI 1044
Query: 1116 PLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRI 1175
LI EP++ FY P++VLDFQSLYPS+MIAYNYCF+T +GR+ + + L +
Sbjct: 1045 SLILEPDANFYKSPLVVLDFQSLYPSIMIAYNYCFTTLLGRLDGFDPKKNTIGFLKHLDL 1104
Query: 1176 PRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKM-QNDEAV 1234
P + L +N I+ SP G F K+SVR+ +L VK M M ++D +
Sbjct: 1105 PPGLVNLLKENDDINLSPNGYMFAKSSVRKSLLSKMLEEILNTRIQVKTVMLMFKDDTNL 1164
Query: 1235 KKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTW 1294
K ++SRQL LKLIANVTYGY +A+FSGRMP +AD++V+ GRE L ++I ++ E +
Sbjct: 1165 AKLLNSRQLALKLIANVTYGYASASFSGRMPNSAIADAIVSTGREILTKSINII-ELANY 1223
Query: 1295 NAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKK 1354
AKV+YGDTDS+F+ +PGRS+ ++F+IG+++A +T+ P P+ LK EKVY PC+L +KK
Sbjct: 1224 GAKVVYGDTDSLFMYLPGRSKEDSFKIGREVAAHITSLFPDPIQLKFEKVYHPCVLLSKK 1283
Query: 1355 RYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKAT 1414
RYVG FE Q++ T++AKGIET+RRDG PA K++ ++L LFT D+S+VK
Sbjct: 1284 RYVGNCFEYESQQEATFQAKGIETIRRDGIPAQQKIVEKALRILFTTKDLSLVKDYTLTQ 1343
Query: 1415 LSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNE-IAKRIGMKDRRAIPRTGWRVSWL 1473
++ + + + F +E Y+ P +A R +D R+ P+ RV ++
Sbjct: 1344 FRKIIANRISIRDFCFAKEVR-FGTYKSLNHIPAGAMVAMRKVARDPRSEPQYRERVPYV 1402
Query: 1474 VTCGAPGVPLVRLARTPQE--LTRDRSLRP---HVAYYATRVXXXXXXXXXXXXGVDVFK 1528
V A P +R P E + R LRP YY RV G D+
Sbjct: 1403 VIEDAE-KPRIRDRSVPPEEFIEAYRHLRPVRLDYEYYIGRVLIPPLERIFNLVGADIRG 1461
Query: 1529 WWNELGYNRTAQQREQTQSGGIEKYMSRERCAVCG--VRTIVRSAVCPQCAHTQRACVV 1585
W+ E+ +TA T + +++ + C CG V ++VC +C ++A +V
Sbjct: 1462 WYKEIP-KQTATDL-HTGVLKMSRHIKSKTCINCGGQVAEGESTSVCRECLSNEQALMV 1518
Score = 63.3 bits (147), Expect = 5e-08
Identities = 53/185 (28%), Positives = 76/185 (41%), Gaps = 31/185 (16%)
Query: 36 YKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASL-----------------DKALNIAM 78
+ LH+H FPYFYI P + Q + S +K N +
Sbjct: 105 FTTVLHVHNFFPYFYIDAPVHSVPLQTIISYLESCLGESFLRNPGDDDEYENEKGTNTNL 164
Query: 79 KQATSSN-----QHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVEL------- 126
+AT+ + + +IS KG P YGY LKV L P + V L
Sbjct: 165 PEATAGGSDQKRRFIARISRCKGTPVYGYQVGNKCMLKVSLLSPVYKTRLVRLIHDKKIN 224
Query: 127 FSSGAILGQTFQP--HESHLNFTLQFFIDFNLFGMSDIDLQSVQFRKSGFSQKSNEVLYD 184
F++ Q F+P +E+HL LQF DFNL+G ++L S FR S + +
Sbjct: 225 FANFCSTKQKFKPNVYETHLPMLLQFLTDFNLYGCGWVELDSFWFRSPVLDYNSPALSFI 284
Query: 185 TKENT 189
+ NT
Sbjct: 285 STTNT 289
>UniRef50_Q9BKQ3 Cluster: DNA polymerase; n=2; Caenorhabditis|Rep: DNA
polymerase - Caenorhabditis elegans
Length = 1133
Score = 425 bits (1046), Expect = e-117
Identities = 243/613 (39%), Positives = 361/613 (58%), Gaps = 16/613 (2%)
Query: 902 VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEK 961
V+++ E+E ++EV K + +D D+M GYE SWG+ R ++LG + D + I +
Sbjct: 407 VVHMETELEMLEEVAKWIVQYDVDVMIGYETIRLSWGFFFRRIKLLGSRISMDRALI-DA 465
Query: 962 NRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQL 1021
+ ++ GR++ +VW++ R +LAL +Y + + VL +++P A L
Sbjct: 466 YEDHIEVDDQEITVAPPKGRLLVSVWKVVRSDLALRNYDLGSAVANVLRKKIPMLDNAAL 525
Query: 1022 SDWWCDESKMLRWIPVEYYLTKLSG-TVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQ 1080
E +R V +L KLS + +L +++ + +E+AR++G+Q+ EV +RGSQ
Sbjct: 526 MRRIKGERSAIR-NDVHLHLLKLSSLNISLLTEMNWFLKNAEMARVYGIQFHEVWTRGSQ 584
Query: 1081 FRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYP 1140
RVES++LR A +N +A S T QR+ M +PE L LI EP+S+ Y DPVIVLDFQSLYP
Sbjct: 585 LRVESMLLRLAHRMNFVAPSITHLQRNMMGSPEQLQLILEPQSKVYFDPVIVLDFQSLYP 644
Query: 1141 SMMIAYNYCFSTCIGRVQNI---NGETAYE----FGAWRLRIPRSKLEALVKNSLIHWSP 1193
SM+IAYNYC+ST +G++ N+ N E+ GA + + + LV + SP
Sbjct: 645 SMVIAYNYCYSTILGKIGNLVQMNDESRNREEIVLGAIKYHPSKDDIVKLVAYKEVCASP 704
Query: 1194 VGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTY 1253
+ FVK S R GV+P VK +MK ++ +K+ + +RQL LKL+ANV+Y
Sbjct: 705 LASMFVKKSKREGVMPLLLREILAARIMVKSAMKRTKNKKLKRILDARQLALKLVANVSY 764
Query: 1254 GYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGR 1313
GYTAAN+SGRMPC E+AD+++ KGRETLER+I++V+ A+VIYGDTDSMFVLV G
Sbjct: 765 GYTAANWSGRMPCAELADAILGKGRETLERSIEMVQRGDYGGAEVIYGDTDSMFVLVRGA 824
Query: 1314 SRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEA 1373
S EAFEIG++I D VT NP PV LKLEKVY+ C+L+TKKRY G+M+E + ++ + +A
Sbjct: 825 SVEEAFEIGRRIVDDVTNSNPDPVVLKLEKVYKGCVLETKKRYAGWMYEH-ENDEGSLDA 883
Query: 1374 KGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTRE 1433
KGIETVRRD CP ++L +SL +F+ + + L L+ E + F +E
Sbjct: 884 KGIETVRRDTCPIVAEVLEKSLGLIFSQNWKTFITYLNTVVLNLPQEN---FSKFVFCKE 940
Query: 1434 YHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQEL 1493
Y G Y A P +IA+ K I G RV +++ G G + R+ +
Sbjct: 941 YRGD--YSARAMVPQKKIAEARIRKCPSHITLRGERVPYVIIDGVTGSTVYSCVRSIDQF 998
Query: 1494 TRDRSLRPHVAYY 1506
R+ + + YY
Sbjct: 999 ARNPEYKINTFYY 1011
Score = 41.5 bits (93), Expect = 0.19
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 177 KSNEVLYDTKENTLTSESSCHYEADCMASHIINRQRIGKGDGIENPGLEEVWNQELERRK 236
++NE+L E T CH E D + + I+N + NPGLE +W +E ER
Sbjct: 33 RNNELLLSPYEKKTT----CHVECDALVTDILNMEMQADNVHSSNPGLEYLWREEKERCD 88
Query: 237 QLNMSL 242
L + L
Sbjct: 89 ALGIEL 94
>UniRef50_Q07G15 Cluster: REV3-like, catalytic subunit of DNA
polymerase zeta RAD54 like; n=11; Eumetazoa|Rep:
REV3-like, catalytic subunit of DNA polymerase zeta RAD54
like - Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 517
Score = 423 bits (1041), Expect = e-116
Identities = 207/452 (45%), Positives = 295/452 (65%), Gaps = 9/452 (1%)
Query: 1140 PSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFV 1199
PS++IAYNYC+STC+G ++N+ ++FG L++P L L + + SP G+ FV
Sbjct: 7 PSIVIAYNYCYSTCLGNIENLGKYEDFKFGCSSLQVPPDLLYQLRHDITV--SPNGVAFV 64
Query: 1200 KTSVRRGVLPXXXXXXXXXXQAVKKSMKM-QNDEAVKKAMHSRQLGLKLIANVTYGYTAA 1258
K VR+GVLP VK+SMK ++D+ + + + +RQLGLKLIANVT+GYTAA
Sbjct: 65 KACVRKGVLPRMLEEILKTRIMVKQSMKKYKHDKGLTRLLDARQLGLKLIANVTFGYTAA 124
Query: 1259 NFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEA 1318
N+SGRMPCVE+ DS+V K RETLERAIKLV + W AKV+YGDTDSMFVL+ G ++ ++
Sbjct: 125 NYSGRMPCVEIGDSIVHKARETLERAIKLVNDTKKWGAKVVYGDTDSMFVLLKGATKEQS 184
Query: 1319 FEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIET 1378
F+IGQ+IA+AVTA NP P+ LK EKVY PC+LQTKKRYVG+M+E+ DQ+ P ++AKGIET
Sbjct: 185 FKIGQEIAEAVTATNPKPIKLKFEKVYLPCVLQTKKRYVGYMYETVDQKDPVFDAKGIET 244
Query: 1379 VRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQA 1438
VRRD CPA K+L +SL LF D+S +K+ V+ +L E + +L F +EY G
Sbjct: 245 VRRDACPAVGKILERSLKLLFETRDISQIKQYVQKQCIKLVEGKASMQDLIFAKEYRGSF 304
Query: 1439 GYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRS 1498
Y+PGA P E+ +++ DRR+ PR G RV +++ G+PGVPL++L R P ++ +D +
Sbjct: 305 AYKPGACVPALELTRKMVAYDRRSEPRVGERVPYVIIYGSPGVPLIQLVRRPIDVLQDHN 364
Query: 1499 LRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNELGYNR----TAQQREQTQSGGIEKYM 1554
LR + YY T+ GVDVF W++EL + TA+ ++ + G I +Y
Sbjct: 365 LRLNGTYYITKQILPPLNRIFSLIGVDVFSWYDELPRIQKTFSTARNEQEARKGTISQYF 424
Query: 1555 SRERCAVCGVRTIVRSAVCPQCAHTQRACVVL 1586
+ C VC + + +C +C + VV+
Sbjct: 425 TTLHCPVCD--ELTQHGICSKCRSQPQHVVVI 454
>UniRef50_A2FWK3 Cluster: DNA polymerase; n=1; Trichomonas vaginalis
G3|Rep: DNA polymerase - Trichomonas vaginalis G3
Length = 1174
Score = 414 bits (1020), Expect = e-114
Identities = 263/812 (32%), Positives = 424/812 (52%), Gaps = 39/812 (4%)
Query: 773 SEQVKKWINEQKALQLLSQFSSEQAISKNM---DDFNNSQALGLNEDEINSSIVS-IENC 828
S+ ++ +++ K L+ +S+ SKN+ ++ NS+ E NS IE
Sbjct: 316 SQVLQPSMSQMKEKPLVQTIASKLLKSKNVLVVEEEKNSEESSSKEKTQNSQKEQDIETG 375
Query: 829 E-SADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGIIVVDS 887
E + FL + IEV S RG + P+PA+D I ++++ D K+ +++
Sbjct: 376 EHGSQFLKVLFIEVGCSSRGKLLPNPAMDQIVCACFTLMID-------KE------IIEK 422
Query: 888 SSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEIL 947
+ V V + S+E E + VI + DPDI+ G+ IE S Y+ ER +IL
Sbjct: 423 VTFWVGPNLVIGEKVEFFSSERELLVGVINYILKIDPDIIVGWNIERESVFYINERCKIL 482
Query: 948 GL-DVLKDLSRITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMY 1006
G+ D ++SR T KN +E Y I GR+ N+WR+ RH+ AL SY+ +
Sbjct: 483 GIKDFYAEVSR-TGKNPHAM---DEVRY---IEGRLTVNLWRVVRHQAALRSYTLASVSD 535
Query: 1007 EVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARL 1066
L + P +Q+S W S R+ V Y + + + + ++ + EL+ +
Sbjct: 536 HFLGTKFPDIKQSQISYWL--HSAPFRF--VSYCRKRATVIISICLAMNFVEYYCELSSI 591
Query: 1067 FGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFY 1126
G + SRGSQF++ESL++R ++ L SPT + S RAP LPL+ EP S FY
Sbjct: 592 IGADFASTYSRGSQFQIESLLIRVSKRLGFCLPSPTRFEVSQQRAPMALPLVMEPMSGFY 651
Query: 1127 SDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKN 1186
SDPV+V+DFQSLYPS +IAYN +++ +GR ++ N T G + ++P LE L++N
Sbjct: 652 SDPVLVIDFQSLYPSSIIAYNLDYTSIVGRTEDAN--TGGRLGVYEHKVPTRVLEELLEN 709
Query: 1187 SLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLK 1246
I +P + +V VR G+LP +K+++K + +K + +RQ+ LK
Sbjct: 710 GKIINTPNDVLYVTKDVRPGLLPAMLDQILNLRAFIKQTLKKTKNAKMKSILDARQMALK 769
Query: 1247 LIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSM 1306
+IA TYGYT+A+FSGRMPCVE++DS+V R LE + + +N V+YGDTDS+
Sbjct: 770 VIAACTYGYTSAHFSGRMPCVELSDSIVECSRHVLEFTLNYIEKNYP-ELSVLYGDTDSL 828
Query: 1307 FVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQ 1366
FV++P S + F+ ++ + +T+ P P+ +K+EK+Y+ C L KKRY G ++E+ DQ
Sbjct: 829 FVMMPPASTEKCFQFADKLCEEITSIFPSPIRIKIEKIYRGCFLVNKKRYCGLVYETADQ 888
Query: 1367 EKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVH 1426
+ PT++ KG+E RRD CP +++ + + + D+ + + K +S+L +P+H
Sbjct: 889 QVPTFDVKGLEMKRRDSCPFTARVMTEVILSIIKTKDIKEAEVIFKQNISKLCHNIIPIH 948
Query: 1427 ELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRL 1486
ELFF RE + G P +A+R D P G R+ ++V +PG LV
Sbjct: 949 ELFFAREL--RLGTYKALEPPGAFVARRQMSVDPMMEPLYGQRLQYIVVSSSPGSRLVDK 1006
Query: 1487 ARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNELG--YNRTAQQREQ 1544
+P+E +R++R YY + GVDV KW + NR +
Sbjct: 1007 VVSPEEYL-ERNMRVCTKYYVEKQLVPALGRVLETMGVDVSKWIKNVSVELNRLPLYIGK 1065
Query: 1545 TQSGGIEKYMSRERCAVCGVRTIVRSAVCPQC 1576
S IE++ +C +CG + +S VC +C
Sbjct: 1066 -GSTVIEQFCVSAQCPLCGNQCSTQSPVCNRC 1096
Score = 66.1 bits (154), Expect = 8e-09
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 19 DIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNIAM 78
+IK+ P +IFG + G CL +HG FP Y+ CP+ P L Q + L I+
Sbjct: 36 EIKRSPWFQIFGTTETGEHECLIVHGFFPEIYVNCPS---NPNELEQFTSEL-----ISY 87
Query: 79 KQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVELFSSGAILGQTFQ 138
+ + + + +P YGY DK ++++FL +P +Q ++ A G+
Sbjct: 88 IERDFGDTCIKSYDYAEYIPAYGYQDK-CKFIRLFLVQPDQQQQLGRHINAFAWNGKPHH 146
Query: 139 PHESHLNFTLQFFIDFNLFGMSDIDLQSVQFRKSGFSQKSNEV 181
+E+H ++F +NL G I L+ KS S+ EV
Sbjct: 147 AYEAHFPNFIKFLSKYNLTGFGYIRLKHAWRVKSILSRYGTEV 189
>UniRef50_UPI00006CCBA6 Cluster: DNA polymerase family B containing
protein; n=1; Tetrahymena thermophila SB210|Rep: DNA
polymerase family B containing protein - Tetrahymena
thermophila SB210
Length = 1907
Score = 361 bits (888), Expect = 9e-98
Identities = 225/638 (35%), Positives = 338/638 (52%), Gaps = 35/638 (5%)
Query: 956 SRITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPS 1015
S I ++N + + E+ E R GR+I+N+WRL R +L L+++ EN YE+ R P
Sbjct: 1207 SSIKQQNDPQSAQQKENIKELRR-GRIIWNIWRLCRDKLKLTNFDAENVYYELFQIRNPV 1265
Query: 1016 YSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVL 1075
YS L+ W+ ES + + +YY KL +L KLDII RT+ ARL+G + ++
Sbjct: 1266 YSNWTLTKWFNSESAKHKTLVFDYYFNKLKINQIVLDKLDIIQRTTSSARLYGCDFESII 1325
Query: 1076 SRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDF 1135
+RGSQFRVE +++R + + LS + Q ++ + E +PL+ EP + DPVIV+DF
Sbjct: 1326 TRGSQFRVEGVLVRVTKQYGYLMLSASRMQVASQKILECMPLVMEPPKMLFVDPVIVMDF 1385
Query: 1136 QSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRS---KLEALVKNSL---- 1188
QSLYPS+MIAYNYC+STC+G NIN E G+ RL + + K E L
Sbjct: 1386 QSLYPSVMIAYNYCYSTCLG---NIN-EQFNNGGSGRLGVNQDAHLKFEQLFGKDRKFNP 1441
Query: 1189 ---------IHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKM-QNDEAVKKAM 1238
I +P + +V+ ++R G+LP +KKS ++D+ + K +
Sbjct: 1442 KDMDQYHQDIFIAPNKVAYVRKTIREGILPQILHEFLLTRIMIKKSAGFYKDDKYLSKLL 1501
Query: 1239 HSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKV 1298
++Q +KL V YGYT A+FSGRMP V++ADS+V GR L + + + N W AKV
Sbjct: 1502 DAQQQSIKLFMCVVYGYTGASFSGRMPSVDIADSIVETGRYLLNQVCEYINSNKDWYAKV 1561
Query: 1299 IYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVG 1358
+YGDTDS+FVL+ GRS EAF IG++IA+++T P P+ LK EKV++ IL +KKRYVG
Sbjct: 1562 VYGDTDSVFVLLKGRSVEEAFRIGKEIAESITKQYPYPIELKFEKVFRELILVSKKRYVG 1621
Query: 1359 FMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRL 1418
+ E +KP + AKGIE VRRDGC A VKL+++SL LF ++S +K + +++
Sbjct: 1622 YKMEK-ITDKPEFLAKGIEIVRRDGCDAVVKLMKKSLNILFETKNLSKLKNYLNKQWAKI 1680
Query: 1419 AETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGA 1478
+ + +E Y+ + +I +D+ A P+ G RV +LV G
Sbjct: 1681 LHGHVNFKDFCIAKEVK-LGKYKEDRVPAHGIVGLKITEQDQLAKPKYGERVKYLVVQGE 1739
Query: 1479 PGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNELGYNRT 1538
+ L + E + + + YY R VD+ + ++T
Sbjct: 1740 QKSKVKDLVVSVPEFFNKFNHQMNSLYYINRQINSSIGRLFSTFDVDIKR------QSKT 1793
Query: 1539 AQQREQTQSGGIEKYMSRERCAVCGVRTIVRSAVCPQC 1576
R Q IE Y E C +C R +C C
Sbjct: 1794 QDLRSQLH---IENYYRLEVCIICYER--CSEDICNSC 1826
Score = 79.0 bits (186), Expect = 1e-12
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 26/203 (12%)
Query: 13 SEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGV----------FPYFYIPCPTQNPEPQL 62
+ ++G ++QVP++R+FG K G K CL++H V ++ +
Sbjct: 67 TNYKGQKVQQVPIIRLFGANKYGQKCCLNVHNVPLDVQFLIMLKSILFLYYIDREKLDSF 126
Query: 63 LYQIAASLDKALNIAMKQATSSNQH---------------VYKISLVKGLPFYGYHDKEH 107
LY+ + +++ Q+ + NQ V+K +V +YGYH +
Sbjct: 127 LYEFCSKVEECFQKVYSQSNAKNQPNKAQKYAGFKNLQQIVHKAEIVYKKDYYGYHAYDE 186
Query: 108 LYLKVFLYRPGLIKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSV 167
++K+ Y P K+ E+ +GAI+ FQ ++ H+++ + F+ D ++GM ++ +
Sbjct: 187 PFIKIIYYNPSHGKKIQEILIAGAIMNLRFQIYDGHISYFMHFYSDNYIYGMKEVYAINY 246
Query: 168 QFRKSGFSQKSNEVLYDTKENTL 190
+FRK FS+ + + N +
Sbjct: 247 KFRKD-FSENNANIFQKLSLNQI 268
Score = 49.2 bits (112), Expect = 0.001
Identities = 71/304 (23%), Positives = 126/304 (41%), Gaps = 28/304 (9%)
Query: 662 FTPTVKPPTKNEMETKYKIPKT--KQVQPFFSDYKDVGDKVEIGQ--LVLKLHSN--LSR 715
FT + KPP + ++ + + P++ + D+ D ++ +V KL LS
Sbjct: 662 FTYSKKPPPFEAIVKNFQQSNSFFEHQYPYYENMVDLFDHYQMKNKNVVNKLQQAQILSH 721
Query: 716 D--QKPFEKVLETESIENWRQLLFLQKYATQDDYKPDTLRTLLAGNSRYVIQPVVRPPTS 773
+ P K+ + + F + Y T DDY ++ + + N + + +PP+
Sbjct: 722 GLIKAPINKLYACDIKNELKLPKFFRIYLT-DDY--ESFKISMYDNKQ-TFKYQQQPPSY 777
Query: 774 EQVKKWINEQKALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSSIVSIENCESADF 833
+Q+ K Q Q IS D LN+ I+N D
Sbjct: 778 QQILKDFQNQTPQQPSRLTDEFNIISPFKDKSPIKTRNSLNQKS------PIQNKFVGD- 830
Query: 834 LTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGIIVVDSSSRKYL 893
+T M++E+ P+PA D + A+F+S+ N K +S +K
Sbjct: 831 ITLMLVEIFARSSPHKLPNPATDSVDALFFSIYNG--------KFDVSPRYFNSEEQKAK 882
Query: 894 DGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLK 953
+ +I V NE + I I + DPDI G+++E +S Y+ +R +ILG+ + +
Sbjct: 883 TNENIS-EIIVVENEEDLIQVFIIITQKIDPDIFGGWDMEKSSLNYLGQRCQILGIQLFE 941
Query: 954 DLSR 957
LSR
Sbjct: 942 LLSR 945
>UniRef50_Q4DKU0 Cluster: DNA polymerase zeta catalytic subunit,
putative; n=1; Trypanosoma cruzi|Rep: DNA polymerase zeta
catalytic subunit, putative - Trypanosoma cruzi
Length = 1885
Score = 343 bits (842), Expect = 3e-92
Identities = 199/564 (35%), Positives = 312/564 (55%), Gaps = 15/564 (2%)
Query: 980 GRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEY 1039
GRV+ ++ R R E+ L S + + ++ + +P ++ A L + + S +R + +
Sbjct: 1119 GRVVVDLGRQLRKEMKLPSQTLQMVYQKLFHSSLPYFTDAALIEMYTSRSDDMRRVALSV 1178
Query: 1040 YLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIAL 1099
LT+ R+ Q L R E +R++G+ ++EVLSRGSQ+RVE+ + R +P+ L
Sbjct: 1179 LLTRAVIPHRIAQHLRFYTRVVEFSRMYGILFYEVLSRGSQYRVEATLHRMTKPMGYAML 1238
Query: 1100 SPTIKQRSTMRAPETLPLIFEPESRFYSD-PVIVLDFQSLYPSMMIAYNYCFSTCIGRVQ 1158
SP+ ++ + ++PLI +P S FY D P++VLDF+SLYPS++IAYN C+STC+G+V
Sbjct: 1239 SPSPEEVHHQPSLVSMPLIMQPRSDFYKDDPIVVLDFRSLYPSIIIAYNLCYSTCLGKVS 1298
Query: 1159 N-----INGETAY-EFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXX 1212
+ T+Y + LR+ ++ + K+ + ++P G F+ VR+GVLP
Sbjct: 1299 KHRRGRLGVLTSYKQVDPLLLRL-LAEDDMCPKSHRVTFAPNGCMFLSPEVRKGVLPQML 1357
Query: 1213 XXXXXXXQAVKKSMKM----QNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVE 1268
V ++K D +++ + +Q +K++AN TYGYTAA+F+GRMPCV+
Sbjct: 1358 QALLDTRLEVLAALKHVAQPSGDNYMQRILQEQQTAIKMLANTTYGYTAASFTGRMPCVD 1417
Query: 1269 VADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADA 1328
VAD+ V GR+TLERA++L+ + W+A+V+YGDTDS+FV +PGR++ EAF G+Q+A
Sbjct: 1418 VADATVMLGRQTLERAMRLINIHPGWDAEVVYGDTDSLFVRLPGRTKEEAFLCGEQMARE 1477
Query: 1329 VTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGV 1388
V+ NP P+ L+LEKV PC+L KKRYVG+ + PDQ +P + A+GIETVRRD CPA
Sbjct: 1478 VSRINPTPIQLQLEKVLSPCLLLAKKRYVGYAYYKPDQTQPQFFARGIETVRRDQCPATS 1537
Query: 1389 KLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPP 1448
+L + LF+ ++ + +L + + F R+ YR PP
Sbjct: 1538 RLAECMIHLLFSGASTDELRARFFEEVGKLQRGACNPADCIF-RKSVKLGRYRDETRLPP 1596
Query: 1449 N-EIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQE-LTRDRSLRPHVAYY 1506
++A R+ KD P G R+ ++V V L PQ L +LR YY
Sbjct: 1597 GAQLAMRLMEKDFTRTPYWGERLPYVVVQPMASVRLCDRVIHPQRLLDLKENLRIDHEYY 1656
Query: 1507 ATRVXXXXXXXXXXXXGVDVFKWW 1530
TR GV W+
Sbjct: 1657 ITRHIIPTLDRMFYLIGVSFANWY 1680
Score = 74.1 bits (174), Expect = 3e-11
Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 39 CLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDK-ALNIAMKQATSSN----QHVYKISL 93
C HIHGV+PYF + ++ + Q A L+ AL + ++S++ Q ++ + L
Sbjct: 145 CAHIHGVYPYFMV---LRHDSRVSVMQFGAQLEAVALRVLRPSSSSTSAPPRQLLHHVEL 201
Query: 94 VKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVELFS-SGAILGQTFQPHESHLNFTLQFFI 152
V+ LPFYGYH++ + +V + P ++ + V L + + G+ +Q +ESH + QF +
Sbjct: 202 VRRLPFYGYHERFRSFFRVSVIDPAMVGRLVRLLGHTTEVGGRRWQTYESHAPYHFQFMV 261
Query: 153 DFNLFGMS 160
D+ + GM+
Sbjct: 262 DYGMKGMA 269
>UniRef50_Q57YY4 Cluster: DNA polymerase zeta catalytic subunit,
putative; n=1; Trypanosoma brucei|Rep: DNA polymerase
zeta catalytic subunit, putative - Trypanosoma brucei
Length = 1958
Score = 336 bits (825), Expect = 4e-90
Identities = 204/591 (34%), Positives = 321/591 (54%), Gaps = 29/591 (4%)
Query: 977 RIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIP 1036
++ GR+I ++ + R L L S + + ++ N +P ++ L+ +C ++ +
Sbjct: 1139 QVAGRIIVDLSKYLRKYLQLPSTTLQMVYKKLFNSSLPFFTDVALTRMYCAGEAGMQRVF 1198
Query: 1037 VEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNL 1096
+ LT++ R+ Q L RT+E AR+FG+ + EVL+RGSQ+RVE+ + R A+P+
Sbjct: 1199 MSILLTRVVAPHRIAQHLHFFTRTAEFARMFGILFSEVLTRGSQYRVEATLHRMAKPMGF 1258
Query: 1097 IALSPTIKQRSTMRAPETLPLIFEPESRFYSD-PVIVLDFQSLYPSMMIAYNYCFSTCIG 1155
LSP ++ +++PLI +P S FY D PV+VLDF+SLYPS++IAYN C++TC+G
Sbjct: 1259 ALLSPPLEVVHRQPRLQSMPLIMQPRSGFYKDDPVVVLDFRSLYPSIVIAYNICYTTCLG 1318
Query: 1156 RV-QNINGET----AYEFGAWRLR-----IPRSKLEALVKN------SLIH---WSPVGI 1196
V + + G +Y+ L + +K + KN + +H ++P G
Sbjct: 1319 SVGKGVYGRLGVLKSYKRDDMLLSSLLSGLADTKNDHNGKNDDNENSNTLHGVTFTPNGC 1378
Query: 1197 GFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQ----NDEAVKKAMHSRQLGLKLIANVT 1252
F+ R GVLP ++ ++K D +++ + +Q+ +K++AN T
Sbjct: 1379 MFLTPENREGVLPQMLRVLLDTRVDLQAALKHVAHPFGDIYMQQILQEQQMAIKMLANTT 1438
Query: 1253 YGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPG 1312
YGYTAA+F+GRMPC +VAD++V GR+TLERA+ L+ + W A+V+YGDTDS+FV +PG
Sbjct: 1439 YGYTAASFTGRMPCADVADAIVMLGRQTLERAMWLINSHPVWKAEVVYGDTDSLFVRLPG 1498
Query: 1313 RSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYE 1372
R++ EAF +G+++A VTA NP PV L+ EKV PC+L KKRYVG+ + P+Q++P +
Sbjct: 1499 RTKEEAFAVGEEMAKEVTAVNPAPVRLQFEKVLFPCLLLVKKRYVGYAYFKPEQQEPQFL 1558
Query: 1373 AKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSL-PVHELFFT 1431
AKGIETVRRD CPA L + + LF+ +++ +S+L PV +F
Sbjct: 1559 AKGIETVRRDQCPATAHLAAKMIHLLFSGAGTETLRQCFYEEVSKLQRGDCSPVDCIFRK 1618
Query: 1432 REYHGQAGYRPGASAP-PNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTP 1490
G+ Y+P P +A + KD P G R+ ++V L P
Sbjct: 1619 AVKFGR--YKPNGRLPAAARLAALLVEKDAMRTPYWGERIPFVVIRRPESTRLSDRVVHP 1676
Query: 1491 QELTRDRS-LRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNELGYNRTAQ 1540
Q+L D L YY TR GV +W+ E+ RT Q
Sbjct: 1677 QQLLSDEDHLMLDSEYYITRHIVPTLDRMFYLVGVSCGRWYAEMPRGRTYQ 1727
Score = 67.7 bits (158), Expect = 2e-09
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 36 YKACLHIHGVFPYFYIPCPTQNPEP-QLLYQIAASLDKALNIAM-KQATSSNQH-----V 88
Y C HIHGV+PYF++ Q Q+ + +AL+ K A + H +
Sbjct: 76 YSVCAHIHGVYPYFFVQRSNSRISAMQFGTQLESVAMEALSSGHNKSAAAPRPHDRQQLI 135
Query: 89 YKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVE-LFSSGAILGQTFQPHESHLNFT 147
+ + +V LPFYGYH K+ + KV++ P ++ + + L+ + + G+ + +E+H F
Sbjct: 136 HHVDVVWLLPFYGYHGKKQPFFKVYVVDPAMVSRFLHLLYCTKHMGGRQWLVYEAHSPFH 195
Query: 148 LQFFIDFNLFGMSDIDLQSVQFR 170
QF D+ GM + S R
Sbjct: 196 FQFMADYGAKGMGAFFIPSCTAR 218
>UniRef50_Q4QB19 Cluster: DNA polymerase zeta catalytic subunit,
putative; n=4; Leishmania|Rep: DNA polymerase zeta
catalytic subunit, putative - Leishmania major
Length = 3096
Score = 334 bits (820), Expect = 2e-89
Identities = 200/582 (34%), Positives = 312/582 (53%), Gaps = 22/582 (3%)
Query: 978 IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWW----CDESKM-- 1031
++GR+ ++ R R E+ + SYS ++L + +P ++ + LS+ + C ++
Sbjct: 2134 VVGRICTSLGRDLRKEIKMPSYSLSMVHVQLLGQPLPYFTDSYLSELFLTPQCADALGGG 2193
Query: 1032 LRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAA 1091
R + Y ++++ R+ KL R E +R++G+ EV++RGSQFRVE+ +L A
Sbjct: 2194 ERHTALRYLASRVAAPHRIACKLRWFTRLLEFSRMYGILTKEVITRGSQFRVEATLLHFA 2253
Query: 1092 RPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYS-DPVIVLDFQSLYPSMMIAYNYCF 1150
PL LSP++ Q E +PL+ +P+S Y DPV+VLDF+SLYPS++IAYN C+
Sbjct: 2254 HPLRYAMLSPSLSQVHRQPRIECIPLVMQPKSGLYRHDPVVVLDFRSLYPSLIIAYNLCY 2313
Query: 1151 STCIGRVQ-NINGETAY--EFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGV 1207
STC+G VQ + +G F + + ++ + +SP G FV S R G+
Sbjct: 2314 STCLGIVQPHSHGRLGVLPRFRQSNAALAELLPDDGTQHDGVVFSPNGAMFVPPSTRVGL 2373
Query: 1208 LPXXXXXXXXXXQAVKKSMKM----QNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGR 1263
LP V+ ++K D +++ + +QL LK++ANVTYGYTAA+++GR
Sbjct: 2374 LPQMVQAVLDTRFEVQAALKHIAVPSGDITMQQRLQEQQLALKMLANVTYGYTAASYTGR 2433
Query: 1264 MPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQ 1323
MPCV++A+++V+ GR+TLER I+L+ W A+V+YGDTDS+FV + GR++ +AF IGQ
Sbjct: 2434 MPCVDLAEAIVSLGRQTLERTIELIHNTPAWRAEVVYGDTDSLFVRLAGRTKADAFRIGQ 2493
Query: 1324 QIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDG 1383
++ADAVT +P P+ L+ EKV PC+L KKRY G+M+ SP QE PT+ AKGIE VRRD
Sbjct: 2494 EMADAVTRSSPAPIRLQFEKVLLPCLLLVKKRYAGYMWSSPTQEAPTFLAKGIEVVRRDQ 2553
Query: 1384 CPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPG 1443
CPA +L + L L +V+++ A + RL + + F R + G
Sbjct: 2554 CPATAQLTDRLLRLLLDDASATVLRQSYYAAVERLQSGAANPLQCIFRRAV--KLGRYKD 2611
Query: 1444 ASAPPNEIAKRIGM----KDRRAIPRTGWRVSWLVTCGAPGV-PLVRLARTPQELTRDRS 1498
A +A R+ KD P G R+ ++V L P+ L +
Sbjct: 2612 ADDTHLPLAARLAFQQMEKDATQTPCWGERLPYVVVRSTTATNKLTDKVLHPERLLQVHD 2671
Query: 1499 LRP-HVAYYATRVXXXXXXXXXXXXGVDVFKWWNELGYNRTA 1539
YY R G+ +W+ + RTA
Sbjct: 2672 THSLDATYYIVRHVNRTLDRMFYLVGISFGRWYQAMPRRRTA 2713
Score = 66.1 bits (154), Expect = 8e-09
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
Query: 37 KACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDK-ALNIAMKQAT--SSNQHVYKISL 93
+ACLH+HGV+P +P +N Q+AA L+ AL + +Q T + Q V+ + +
Sbjct: 206 RACLHVHGVYPSLLLPQYDRNVSAD---QLAAQLEAVALRVLARQGTFVPTQQLVHNVHI 262
Query: 94 VKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVE-LFSSGAILGQTFQPHESHLNFTLQFFI 152
V YGY H + +V L P L+ + V+ L +S + G+ +Q +++H + QF +
Sbjct: 263 VHRFNVYGYRPHAHAFYEVELIDPDLLPRVVDVLQNSTEVGGRRWQLYDAHYRYHTQFMV 322
Query: 153 DFNLFGMSDIDL 164
+ + G++ L
Sbjct: 323 RWRVSGIAPFPL 334
>UniRef50_A0BFH6 Cluster: DNA polymerase; n=1; Paramecium
tetraurelia|Rep: DNA polymerase - Paramecium tetraurelia
Length = 1544
Score = 333 bits (818), Expect = 3e-89
Identities = 215/654 (32%), Positives = 335/654 (51%), Gaps = 41/654 (6%)
Query: 978 IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPV 1037
++GRV+ NVWR ++ + YS EN +++ ++ LS W+ E+ ++
Sbjct: 863 VVGRVLINVWRNVATDIKIIDYSIENVYFQMFKQKNALIHNQTLSQWFKSET----FLVF 918
Query: 1038 EYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLI 1097
+YY +++ T +L+ + +I RT E+A+LFG ++ V RGSQF++ES++ R + + +
Sbjct: 919 QYYAKRINMTFDILEMIGLIPRTIEIAKLFGCEYESVGFRGSQFKIESILNRVTKLNDYL 978
Query: 1098 ALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRV 1157
LS T Q ST + E +PL+ EP F DP+IVLDFQSLYPS+MIAYN CFSTC+G +
Sbjct: 979 LLSATRVQVSTQKILECMPLVVEPPKIFTVDPLIVLDFQSLYPSIMIAYNLCFSTCLGSI 1038
Query: 1158 QNINGETAYE-FGAWRLRIPRSKL-------EALVKNSLIHWSPVGIGFVKTSVRRGVLP 1209
+ E + FG I L E L+K+ LI +P + F+ VR G++P
Sbjct: 1039 KEEFQEGGKKRFGVVATDIDFESLLQKYQNQEELMKHILI--TPNNVAFLTKDVRVGIIP 1096
Query: 1210 XXXXXXXXXXQAVKKSMKMQNDEAVKKAMHS-RQLGLKLIANVTYGYTAANFSGRMPCVE 1268
+KKS + + + H RQL +KL NV YGY A+FSGRMP +
Sbjct: 1097 QILNEFLMTRIMIKKSTSLYDKHPKIQKQHGFRQLAIKLFMNVMYGYCGASFSGRMPSGD 1156
Query: 1269 VADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADA 1328
+ADSVV GR L + I+ + N W AKV+YGDTDS+FV++PGR+ EA IG QIA
Sbjct: 1157 IADSVVELGRTILNQCIECINTNPAWQAKVLYGDTDSLFVMLPGRTVNEALLIGNQIAQH 1216
Query: 1329 VTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGV 1388
T+ P P+ LK EKVY +L KKRYVG FE + + + KG+E +RRDG PA
Sbjct: 1217 CTSLYPHPIELKFEKVYSEALLVAKKRYVGNKFEKGEFQ---LDGKGLEIIRRDGFPALQ 1273
Query: 1389 KLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPP 1448
K+ ++++ LF D+S +K ++ +++ + + + + +E Y+ G
Sbjct: 1274 KIQKKAINILFKTKDLSQLKLYMQKQWAKILQDHVDIQDYIMAKEVK-LGSYKEGRLPAH 1332
Query: 1449 NEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYAT 1508
+A +I D P+ G RV ++V L L + L PH YY
Sbjct: 1333 AVVATKIMNSDPMRRPKGGERVPYVVIQAQGTSKLADLVVNIYDFQSTMKLNPH--YYIK 1390
Query: 1509 RVXXXXXXXXXXXXGVDVFKWWNEL----------GYNRTAQQREQTQSG--GIEKYMSR 1556
++ +D+ W++ L + T QT++ + KY++
Sbjct: 1391 QI-NAAVGRLFACFDIDIADWYSNLPKMLAKRDQFKQHLTYSNAHQTKATQYTLVKYLNI 1449
Query: 1557 ERCAVCGVRTIVRSAVCPQCAHTQR-ACVVLQTRAN----NAATYLDSCYSVII 1605
++C +CG + + +C C+ R A +LQ + N + A SC S I
Sbjct: 1450 QQCLLCGEES--KYELCKSCSQDGRTALFLLQYKQNLLEIDKANITSSCKSCSI 1501
Score = 106 bits (255), Expect = 4e-21
Identities = 100/413 (24%), Positives = 192/413 (46%), Gaps = 35/413 (8%)
Query: 8 LDVTYSEFRGTDIKQVPVLRIFG-PAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQI 66
L + +++ I+ PV+R+FG K + C+H+HG FPYFYI L +
Sbjct: 22 LKYSNTDYLDRPIQFAPVIRLFGYEPKTKERMCVHVHGYFPYFYIKVDELRHLFTDLDFV 81
Query: 67 AASLDKALNIAM--------KQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPG 118
++K + K++ + +Y+ L + L FYG+H ++ L+LK+F+Y
Sbjct: 82 KDFINKVHQVYASTFLAHYPKKSQEKFKIIYQYELCQKLDFYGFHMQKQLFLKLFMYDKQ 141
Query: 119 LIKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFRKSGFSQKS 178
+ Q V L +SGAI+ FQ +ESHL + + F+ D NLFGMS I + +++RK F +
Sbjct: 142 YMSQLVMLLASGAIMNYKFQSYESHLTYFMHFYSDANLFGMSQIKILKLKYRKR-FDKDL 200
Query: 179 NEV---------LYDTKENTLTSESSCHYEADCMASHIINRQRIGKGDGIENPGLEEVWN 229
+ L+ ++ + L ++C E DC + I+N + + D +E + +
Sbjct: 201 ESLLTKPILFRDLHASQYSHLYRVTTCPLEIDCHYTCILNERYKDEKDRLE---IARAFT 257
Query: 230 QELERRKQLNMSLASKSLSQGLTSLKQVETDSHYKF-ENIFAVKLSNKIDKPVLLEHAYY 288
E +L SL L S +++ + +KF + + + +K + L EH Y
Sbjct: 258 HNKEFEVELTPSL------NKLWSDEEINR-ARFKFNQPVSFIVDKSKNKEGQLWEH--Y 308
Query: 289 PAETLGDTQLFKAVDVSIHLPSKDLDLTLNRTTKMNLNEHEEEDLDTTIVDENLVLNSSM 348
P+ + + Q K ++ +K + + + + +N++ + DE + S+
Sbjct: 309 PSVNVLNKQFMKQY-FQLYEDAKKNHIKFDINSCI-INQNIAQMFFNGQQDEMELCKKSI 366
Query: 349 SLQYSQVLLNSEDM-ELIDMLHDMDQQRVEEDSIMGTPANRDQEVDMELDDAE 400
++ + +D+ ELI ++D + +D + + D +L+DAE
Sbjct: 367 IQRFQEYKTRKKDLFELIKEEGNIDYEYDFDDKFIDQQDLQQDNEDEDLEDAE 419
Score = 59.3 bits (137), Expect = 9e-07
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 821 SIVSIENCESADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLT 880
SI+S ++ + L M+ E+ + + PDP D I + N ++ + K L
Sbjct: 643 SILSEDDITFQEDLVLMIFEIFSYKDSKLLPDPEKDEISFIILHSYN-VKSSKIMNKML- 700
Query: 881 GIIVVDSSSRKYLDGCV--FNVPVIYV----SNEIETIDEVIKLVNIHDPDIMCGYEIEM 934
II + + K ++G N PV Y NEI + +V++ DPD + GY++E
Sbjct: 701 -IIQNEENYLKAVNGYFERMNAPVEYTIVLTQNEINLMKAFTLIVHLIDPDFISGYDLET 759
Query: 935 NSWGYVLERAEILGLDVLKDLSR 957
S YV RAE +G D L ++SR
Sbjct: 760 RSLYYVANRAEFIGYDFLTEISR 782
>UniRef50_Q5A4E5 Cluster: DNA polymerase; n=1; Candida albicans|Rep:
DNA polymerase - Candida albicans (Yeast)
Length = 1261
Score = 319 bits (784), Expect = 4e-85
Identities = 196/538 (36%), Positives = 307/538 (57%), Gaps = 39/538 (7%)
Query: 765 QPVVRPPTSEQVKKWINEQKALQLLS----QFSSEQAISKNMD-DFN-NSQALGLNEDEI 818
Q V PP+ +V KW+ +A L QF E ++++ D ++ NS + DE
Sbjct: 740 QYVPEPPSKREVSKWLKHDEAYTLKKNTKYQFQIEPGVTQSYDYKYSYNSMKISRRPDEF 799
Query: 819 NSSIVSIENCESADFLTSMVIEVHTSV-RGDMHPDPAVDPIKAVFYSVINDCPNNHFLKK 877
N C LT+ +E+H + + DP DPI +FYS D NN F
Sbjct: 800 N--------C-----LTNFHMELHANPPNSKLTVDPLRDPISLIFYSF--DDANNMFRHL 844
Query: 878 SL-TGIIV-----VDSSSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYE 931
+ +GI++ +D + + L + N + +E++ I +++ LV + DPDI+ GYE
Sbjct: 845 NFASGILIFNNTNIDMNLIQRLSHTL-NKHIEIFDDELKMITKLVTLVELFDPDILSGYE 903
Query: 932 IEMNSWGYVLERA-EILGLDVLKDLSRITEKNRQK---RW-MKNESDYEGRIIGRVIFNV 986
+ SWGY++ER ++ G++++ DLSR + K+ K RW + S+ E I GR + NV
Sbjct: 904 VNSMSWGYIVERLRDVFGINIMSDLSRGSFKSNGKFGDRWGYTHTSNIE--ISGRHMLNV 961
Query: 987 WRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSG 1046
WR R EL+L+SYS EN Y +L++ +P YS +LS+W + + + + YY+ ++
Sbjct: 962 WRPLRSELSLTSYSLENVTYHLLHKSLPRYSNYRLSEWLKEGTFSSIFAVLSYYINRIDI 1021
Query: 1047 TVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQR 1106
++++ ++I R E +RL G+++ RGSQ++VES++ R +P +L+ SP+ +Q
Sbjct: 1022 VLKIINVQELITRNVEHSRLIGIEFNSNFYRGSQYKVESILARICKPESLLLNSPSKQQV 1081
Query: 1107 STMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAY 1166
MR E +PLI EP+S FY P++VLDFQSLYPS+MIAYNYC+ST +G++ N T
Sbjct: 1082 HEMRPIECIPLILEPKSNFYKSPLVVLDFQSLYPSIMIAYNYCYSTLVGKLHNYR-PTKN 1140
Query: 1167 EFGAWR-LRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKS 1225
G R L+IP + L + + SP G FVK+ +R+ VL +K+
Sbjct: 1141 NIGYLRNLKIPYGLVNLLQREDGFNISPNGFVFVKSHIRKSVLAKMLEEILSIRIKIKQV 1200
Query: 1226 MKM-QNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLE 1282
MK+ + D + K +SRQL LKLIANVTYGYT+A FSGRMP ++AD++V+ GRE +
Sbjct: 1201 MKLFKEDAELTKLYNSRQLALKLIANVTYGYTSATFSGRMPNSDIADAIVSTGREIFQ 1258
Score = 44.0 bits (99), Expect = 0.035
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 38/167 (22%)
Query: 36 YKACLHIHGVFPYFYIPCP----TQNPEPQLLYQIAASLDKALNIAMKQATSSN------ 85
+ +H+H +PY Y+ C T+ + I L+ L + K SS
Sbjct: 96 FNVVIHVHNFYPYIYVDCHETDFTKLENDDFIKLITDYLETVLEESFKYRKSSKNLDDDE 155
Query: 86 -------------QHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVELFSSGAI 132
+++ +S+ KG+P YG+ + K+ L P + +LF I
Sbjct: 156 QNHVENLKRSGQRKYIANVSVCKGVPIYGFQLGYRFFYKISLLSPLYKSRLAKLFQENTI 215
Query: 133 ----LGQ------TFQP-----HESHLNFTLQFFIDFNLFGMSDIDL 164
+G T+ P +E+H+ + LQF D+NLFG +++
Sbjct: 216 SLFRIGMEKKKNVTYNPEPAYVYEAHIPYLLQFLTDYNLFGCGWVNI 262
>UniRef50_A2YPR6 Cluster: DNA polymerase; n=3; Oryza sativa|Rep: DNA
polymerase - Oryza sativa subsp. indica (Rice)
Length = 1731
Score = 303 bits (745), Expect = 2e-80
Identities = 159/332 (47%), Positives = 219/332 (65%), Gaps = 15/332 (4%)
Query: 980 GRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEY 1039
GR+I N+WRL R E+ L++YS E EVL +VP L+ W+ S R+ +EY
Sbjct: 1088 GRIILNLWRLMRAEVKLNNYSLEAVANEVLRRKVPLVPTKILNRWFATGSGRGRYRCIEY 1147
Query: 1040 YLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIAL 1099
+ S + +L +LD++NRTSELAR+FG+ ++ VLSRGSQFRVES++LR N +A+
Sbjct: 1148 VNKRSSLNLEILNQLDLVNRTSELARVFGIDFFSVLSRGSQFRVESMLLRLVHTQNYLAI 1207
Query: 1100 SPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRV-- 1157
SP +Q ++ A E LPL+ EPES FYSDPV+VLDFQSLYPSM+IAYN C+STC+G+V
Sbjct: 1208 SPGNQQVASQPAMECLPLVMEPESAFYSDPVVVLDFQSLYPSMIIAYNLCYSTCLGKVFP 1267
Query: 1158 --QNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXX 1215
++ G ++Y ++ A +KN L+ +P G+ +V+ VR+GVLP
Sbjct: 1268 SKSSVLGVSSYSADPQKI--------ADLKNQLL-LTPNGVLYVQPEVRKGVLPRLLEEI 1318
Query: 1216 XXXXQAVKKSMK--MQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSV 1273
VKK+MK + + +++ ++RQL LKLIANVTYGYTAA FSGRMPC E+ADS+
Sbjct: 1319 LSTRIMVKKAMKKLSASQKVLQRIFNARQLALKLIANVTYGYTAAGFSGRMPCAEIADSI 1378
Query: 1274 VAKGRETLERAIKLVRENTTWNAKVIYGDTDS 1305
V GR TLE AI V ++ W A+V+YGDTDS
Sbjct: 1379 VQCGRRTLETAISFVNQHPLWKARVVYGDTDS 1410
Score = 104 bits (250), Expect = 2e-20
Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 3/191 (1%)
Query: 1361 FESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAE 1420
+ESP+Q++P ++AKGIETVRRD CPA K+L QS+ +F D++ V+ ++ +R+
Sbjct: 1411 YESPEQKEPIFDAKGIETVRRDTCPAVAKILEQSIRIMFEEQDLAKVRSYLERQWTRILS 1470
Query: 1421 TSLPVHELFFTREYH-GQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAP 1479
+ + + F +E G R + P +A + + D RA PR G RV ++V G P
Sbjct: 1471 GKISIQDFVFAKEVRLGTYSARASSLPPAAIVATKAILSDPRAEPRYGERVPYVVIHGEP 1530
Query: 1480 GVPLVRLARTPQELTRDRS-LRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNELGYN-R 1537
G LV + P L S R + YY T+ G D+ KW+NE+ R
Sbjct: 1531 GARLVDMVIDPYGLLEVGSPYRLNALYYITKQIIPALQRVFGLVGADLNKWFNEMPRPIR 1590
Query: 1538 TAQQREQTQSG 1548
+ Q+ SG
Sbjct: 1591 ETLAKRQSASG 1601
Score = 81.0 bits (191), Expect = 3e-13
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 1 MTKPTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEP 60
M P G D +YS F G ++++VPV+RI+G G K CLHIH + Q P
Sbjct: 29 MAPPLPGFDFSYSHFHGGEVEEVPVIRIYGSTPAGQKTCLHIHRLISLVIFDSRLQ-PSL 87
Query: 61 QLLYQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLI 120
++ ++ S+ L + K+ N + KG F GL+
Sbjct: 88 RVFDALSVSVLPFLYVPCKEDLLHN-------VEKGNSFIS----------------GLL 124
Query: 121 KQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFR 170
+ GA+L + FQP+ESH+ + L F ID+NL+GM + + +FR
Sbjct: 125 SDLEKALQDGAVLNRVFQPYESHIPYLLHFLIDYNLYGMGYVHVTDFKFR 174
Score = 78.6 bits (185), Expect = 1e-12
Identities = 66/187 (35%), Positives = 98/187 (52%), Gaps = 12/187 (6%)
Query: 794 SEQAISKNMDDFNN-SQALGLNEDEINSSIVSIENCESADF-----LTSMVIEVHTSVRG 847
S Q I KN+ D+++ SQ G +E + + + I C+ A LT + IEV T RG
Sbjct: 871 SNQEI-KNLADWHDFSQISGGDEKDKLTPLSQIGFCDPASIGGGQQLTIISIEVITESRG 929
Query: 848 DMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGIIVVDSSSRKY-LDGCVFNVPVIYVS 906
++ PDP D I AV +V +D N + + G DSS R+ LDG V V
Sbjct: 930 ELRPDPRFDAINAVSLAVEDDADNTIEVHVLIRGNN--DSSHRRRNLDG-VSGCDVNVFP 986
Query: 907 NEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKR 966
E E ++ +I + DPDI+ G+EI++ S G++ ERA LG+ +LK +SR T ++ K
Sbjct: 987 GERELLNHLINAICSIDPDIIVGWEIQLGSLGFLAERAAHLGIGLLKRISR-TPPHQMKH 1045
Query: 967 WMKNESD 973
N D
Sbjct: 1046 PPMNPVD 1052
>UniRef50_UPI0000498DAE Cluster: DNA polymerase zeta catalytic
subunit; n=1; Entamoeba histolytica HM-1:IMSS|Rep: DNA
polymerase zeta catalytic subunit - Entamoeba histolytica
HM-1:IMSS
Length = 1385
Score = 298 bits (732), Expect = 7e-79
Identities = 212/716 (29%), Positives = 346/716 (48%), Gaps = 44/716 (6%)
Query: 874 FLKKSLTGIIVVDSSSRKYLDGCVFNVPVIYV--SNEIETIDEVIKLVNIHDPDIMCGYE 931
F K+L +I D + KYL + I + NE+ + +IK++N D D++ +
Sbjct: 631 FRNKTLFYLIHTDLEAIKYLHNIYKTLKTIDIICHNELSLFNSLIKIINDEDADMIIAED 690
Query: 932 IEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFR 991
++ ER ++ D + NR ++N +GR++ ++W +++
Sbjct: 691 CSFTIQ-FINERYKLYKQGSFND-----KINR----LQNGKGIKGRLV----LDMWHIYK 736
Query: 992 HELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRML 1051
S+Y + +V N +P+ +Y + E + ++ L +L
Sbjct: 737 ECSKFSNYETDYIAKQVFNVSLPNVNYLCYN---APEQLLNSFLRFHCCLL-------LL 786
Query: 1052 QKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRA 1111
INR E A+ + RGSQ++VE + R ++ SP+ Q ++ RA
Sbjct: 787 DYFGYINRIREFAQFHSCPLKGEIERGSQYKVECYLKRVSKS-EFKLFSPSDNQLNSSRA 845
Query: 1112 PETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAW 1171
+ + L+ EP+S F+S+PVIVLDF S+YP+ IAYN C+STC+G V +IN E + G
Sbjct: 846 TDCVALVMEPQSGFHSNPVIVLDFLSMYPTTAIAYNICYSTCLGYVDDINIER--KIGPM 903
Query: 1172 RLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKM--Q 1229
+ L L N IH GI FV VR+G+LP Q +K+ MKM +
Sbjct: 904 TYSFEKENLHTLKGN--IHVVANGIMFVDACVRKGILPIMLEEMLSTRQHIKERMKMFTK 961
Query: 1230 NDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVR 1289
EA KK +QL LKL+ NV YGYT A SGRMPC E+AD++V R+TLE+AI
Sbjct: 962 GSEAYKKCF-LQQLALKLLCNVVYGYTGAGLSGRMPCNEIADAIVETARQTLEKAINFAE 1020
Query: 1290 ENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCI 1349
+ KVIY DTDS+FV + G++ E+FE+G+Q+ + PPP+ L+LEKVY P +
Sbjct: 1021 RK--FGGKVIYSDTDSLFVEMEGKTIEESFEVGKQLCEEFNKTIPPPMKLQLEKVYWPLV 1078
Query: 1350 LQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKR 1409
TKKRY G +E + KPT EAKG+E VR+D C V+ + S+ + + D+ +K+
Sbjct: 1079 TVTKKRYFGMKYEK-CETKPTLEAKGLEAVRKDSCEV-VRGMMASVMKYLLNKDIEGMKQ 1136
Query: 1410 LVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAP-PNEIAKRIGMKDRRAIPRTGW 1468
++ + + + + +R Y + Y G P ++ + +D + G
Sbjct: 1137 YLEINWEMIQKGEGFIDDFVISRPY--RRHYAEGRKPPIGTKVVLKERERDNTFYFQYGQ 1194
Query: 1469 RVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFK 1528
RV ++V + G L A +PQ ++ + YY + G+D+ K
Sbjct: 1195 RVKYVVVRTSSG-KLCDSAVSPQFAASEQMIIDS-DYYINKQINNALQRILLPCGIDINK 1252
Query: 1529 WWNELGYNRTAQQREQTQSGGIEKYMSRERCAVCGVRTIVRSAVCPQCAHTQRACV 1584
W+N + + + +E Y +C C + I S +C C++ +R +
Sbjct: 1253 WYN-TSLTTILFEGRKDKKVRLEDYYLIHKCIRCNKKIIGESYLCKTCSYDKRIVI 1307
Score = 41.5 bits (93), Expect = 0.19
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 29 FGPAKDGYKACLHIHGVFPYFYIPCPTQNP---EP--QLLYQIAASLDKALNIAMKQATS 83
FG +DG C+ +G P+ I N EP + + ++++ +N K
Sbjct: 31 FGHQEDGNTCCIIFYGWKPHLDIDLTELNKKINEPIGDVFIDLVETINEVIN-EQKPKEK 89
Query: 84 SNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVELFSSGAILGQTFQPHESH 143
+ + + +++G+PF GYH ++H + +V+L I Q ++ + +E+H
Sbjct: 90 QYRIIDHLEVIEGIPFVGYHTRKHTFGRVWLKNHKDINQVRKICNE-----MDINIYEAH 144
Query: 144 LNFTLQFFIDFNL 156
L+ + F D L
Sbjct: 145 LSPDIIFMTDLGL 157
>UniRef50_Q233J3 Cluster: DNA polymerase family B containing protein;
n=2; Tetrahymena thermophila SB210|Rep: DNA polymerase
family B containing protein - Tetrahymena thermophila
SB210
Length = 2315
Score = 298 bits (731), Expect = 9e-79
Identities = 199/645 (30%), Positives = 308/645 (47%), Gaps = 42/645 (6%)
Query: 978 IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPV 1037
I GR+I N WRL +H+ L Y E+ + V ER+P +S L+ + E R
Sbjct: 1063 IAGRMIINTWRLVKHDYKLFCYELESVVNYVFQERIPIFSNWSLTQMYNHEDIKQRVFVF 1122
Query: 1038 EYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLI 1097
EY + +L T ++ + IIN +E +L+G + + +G QFR+E +M R L
Sbjct: 1123 EYMMKRLMKTKDIIDHIQIINTCAEETKLYGFDFQSAICKGHQFRIEHIMNRVTDLLGYK 1182
Query: 1098 ALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRV 1157
+S + T R E PL EP FY DPVIVLDF SLYPS+MIAYN CFSTC+G +
Sbjct: 1183 LMSASRYGVQTQRMLECSPLTLEPPKLFYVDPVIVLDFISLYPSIMIAYNLCFSTCLGYI 1242
Query: 1158 Q-NINGETAYEFGAWR---------LRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGV 1207
N + G + L+ ++ L+K+ + +P + FVK SVR GV
Sbjct: 1243 DDNFQKGGFKKLGVQKQWDVQFEELLKKHNYDIDELMKDIFV--APNKVAFVKKSVREGV 1300
Query: 1208 LPXXXXXXXXXXQAVKKSMKM--QND--EAVKKAMHSRQLGLKLIANVTYGYTAANFSGR 1263
L Q +K +M QN + + RQ LKL V +GYT A FSGR
Sbjct: 1301 LSQITHEFFFTRQFIKGNMGKYKQNPLYNHIYNKLQQRQKSLKLFMCVIFGYTGATFSGR 1360
Query: 1264 MPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQ 1323
MP ++ADS++ G+ L +AI L+ + W A+VIYGDTDS+FV + G S +A +IG+
Sbjct: 1361 MPLGDLADSIIQIGKFLLNQAINLINNSKKWGAQVIYGDTDSVFVNIKGVSVNDAIKIGK 1420
Query: 1324 QIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDG 1383
+I V+ P P+ LK EK YQ ++ TKKRY GF E+ + ++P +EAKG+E +R+DG
Sbjct: 1421 EIESEVSKMFPYPLKLKYEKTYQNLVILTKKRYAGFFVEN-ETDEPKFEAKGLEVMRKDG 1479
Query: 1384 CPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPG 1443
C A +++ L L + ++S +K + +L +L ++E + P
Sbjct: 1480 CQALSIIMKNCLETLLKNKNLSAIKLYLNGEWQKLLNDQFSYRDLIISKECKLENYTMP- 1538
Query: 1444 ASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHV 1503
P IA + +D + P+ G R+ + + L + E ++ + ++
Sbjct: 1539 --PPHARIALKEMKRDPQTKPKYGQRIKYFIINNPQSQRLYDCVVSVNEFMKNYRHQINL 1596
Query: 1504 AYYATRVXXXXXXXXXXXXGVDVFKWWNEL------GYNRTAQQREQTQSGGIEK----- 1552
Y + VD+ W + +N A Q +Q Q GG+
Sbjct: 1597 NEYLEKQINSALGRLFSTFDVDIQDWVQRIKKSEIKSHNILAIQNKQ-QKGGLSSEFQKQ 1655
Query: 1553 --------YMSRERCAVCGVRTIVRSAVCPQCAHTQRACVVLQTR 1589
Y +E C C +T ++ +C C A + + T+
Sbjct: 1656 KKQFQLNHYYLKEICIACSNKT--KNQICENCLQDPSALIFILTQ 1698
Score = 85.4 bits (202), Expect = 1e-14
Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 14/272 (5%)
Query: 20 IKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNIAMK 79
I Q PV R++G K G CLHIHGV ++ + + + I +++ K
Sbjct: 85 ILQAPVARMYGNDKQGNSVCLHIHGVNQISHLIQNDKTFLDKFIDLIEECYYTLYSVSEK 144
Query: 80 QAT---SSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVELFSSGAILGQT 136
Q S+ + ++ YGYH E +LK++ Y P +IK+ V + SG ++
Sbjct: 145 QKKFLMSTTPIILNYEIIYKKDIYGYHSTEEPFLKIYFYNPKMIKKLVGILESGVVMNIE 204
Query: 137 FQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFRKS---GFSQ--KSNEVL-----YDTK 186
F +E HL L+ + D ++ G+ +I L RK+ Q K E+ K
Sbjct: 205 FVIYEGHLTHFLKLYSDLDIKGLREIKLLKYSLRKNENQALQQLTKEREICKYYLNSKNK 264
Query: 187 ENTLTSESSCHYEADCMASHIINRQRIGKGDGIENPGLEEVWNQELERRKQLNMSLASKS 246
N++T S+C E D +I+N + + EN +E + EL + + S
Sbjct: 265 FNSMTKVSTCDVEIDVYYKNILNYIFLQEEKSEEN-FIEMCSDLELAKNCKQRTRECSVQ 323
Query: 247 LSQGLTSLKQVETDSHYKFENIFAVKLSNKID 278
+++ L + E I ++K + ID
Sbjct: 324 INKSLEMFWKEEKQMQEDLFGIKSMKATQTID 355
Score = 55.2 bits (127), Expect = 1e-05
Identities = 121/523 (23%), Positives = 220/523 (42%), Gaps = 59/523 (11%)
Query: 460 QLGLSRPKKKNERVNNPTNTDSNIDTSEIDEINVSRETADGDVCISELVRASKISKTSIE 519
+L L ++ + N+ N D + S+ DE + S + D D I++ + + +
Sbjct: 499 ELDLLPEDQQEDSENDQQNEDIDQYDSDSDEQSSSSDD-DNDENINDEDDNNNFQEKDSK 557
Query: 520 NTEIKSEETFIDAVSRITAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNS 579
N EIK + ++ I KL N ++ L N+F+ G S K ++ ++
Sbjct: 558 NMEIKISPNYYQVFLEKLVEEKIEKL-NITKKRTL-NEFLQ--GNSEKLKHEEDQKVKKH 613
Query: 580 SNNELELSPDGNELGIVSFYDASKVFDDSFN---QTFLQEQTNCDDCSDIIANEYEKQED 636
+ E + N + +++ D+FN E T +C +Y + +
Sbjct: 614 IKLQYEKQTNQNNI---------QIWRDNFNAVKNNMEVEDTAFSECQYCKQIKYLCRCN 664
Query: 637 YDKFKDTELKLDVSVNEKLDTGIKIFTPTVKP--PTKNEMETKYKIPKTKQVQPFFSDYK 694
++ ++++ EK K F KP P+ N++ +KQV+ ++ Y+
Sbjct: 665 LNESTKQDIQIVQQFFEKPQNQAKRFVLKYKPKCPSFNQIMAT---GISKQVEHQYAYYE 721
Query: 695 DVGDKVEIGQLVLK-LHSNLSRDQKPFEKVLETESIENW----RQLLFLQKYATQ---DD 746
++ D E L K + NL Q + +++T + + + L L KY +D
Sbjct: 722 NLEDLFEHYNLKNKSVQRNLYFAQILEKDIIKTPQHKQYYVGIQNNLKLPKYFRAYITED 781
Query: 747 YKPDTLRTLLAGNSRYVIQPVVRPPTSEQVKKWINEQKALQLLSQFSSEQAISKN-MDDF 805
Y D+ + R+ Q + P+ +Q+ I + Q Q + ++KN + F
Sbjct: 782 Y--DSQQQFQETKQRFRYQK--KCPSFKQISADIIKSNKKQN-KQLLNVTPVTKNWLSPF 836
Query: 806 NNSQALG-LNEDEINSSIVSIENCESADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYS 864
++SQ L E++ N + + E +T E+ DM PDP+ DPI + +
Sbjct: 837 SHSQKQEKLTENQQNQNKKLTQYHED---ITMYTFEIFAKSTPDMLPDPSSDPINFIVFD 893
Query: 865 VINDCPNNHFLKKSLTGIIVVDSSS--------RKY--LDGCVFNVPVIYVSNEIETIDE 914
+ N K GII+VD + RKY + +F +I NE E +
Sbjct: 894 LENF--------KRTQGIILVDEINCHEPIDKVRKYYGFNDSMFKT-IIVTKNEEELLLT 944
Query: 915 VIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSR 957
IK ++I + DI+ G++IE S Y R LG+DV+ LSR
Sbjct: 945 FIKQIHIFNVDIITGWDIEKKSLFYFSHRCWQLGIDVMDILSR 987
>UniRef50_A7EFB8 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1430
Score = 290 bits (712), Expect = 2e-76
Identities = 162/424 (38%), Positives = 238/424 (56%), Gaps = 14/424 (3%)
Query: 1179 KLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKM-QNDEAVKKA 1237
+L L+K+ I+ +P G+ + K ++R+ +L VK MK+ + D+A+++
Sbjct: 932 RLLELLKDH-INIAPNGMMYAKPNIRKSLLAKMLGEILETRVMVKSGMKLDKEDKALQRL 990
Query: 1238 MHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAK 1297
+++RQL LKLIANVTYGYT+A+FSGRMPC E+ADS+V GRETLERAI L+ W A+
Sbjct: 991 LNNRQLALKLIANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIALIHSVKRWGAE 1050
Query: 1298 VIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYV 1357
V+YGDTDS+FV + GRS+ EAF+IG +IA VT NP P+ LK EK+Y PC+L KKRYV
Sbjct: 1051 VVYGDTDSLFVYLKGRSKDEAFDIGNEIAKTVTNMNPRPIKLKFEKLYLPCVLLAKKRYV 1110
Query: 1358 GFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSR 1417
GF +E Q +P ++AKGIETVRRDG PA K+ ++L LF D+S VK + +
Sbjct: 1111 GFKYEGKSQIEPDFDAKGIETVRRDGTPAEQKIEERALKILFRTADLSQVKSYFQEQCEK 1170
Query: 1418 LAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCG 1477
+ + S+ + + F RE G P I+ + ++D RA P+ G RV ++V G
Sbjct: 1171 IMKGSVSIQDFCFAREVKLGTYSDKGPPPPGALISTKKMLEDARAEPQYGERVPYVVVTG 1230
Query: 1478 APGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNELGYNR 1537
APG L+ P++L YY ++ G +V W++E+ +
Sbjct: 1231 APGARLIDRCVAPEDLLNSDHSELDAEYYISKNLIPPLERIFNLMGANVRSWYDEMPKVQ 1290
Query: 1538 TAQQREQTQSGG-----------IEKYMSRERCAVCGVRTIVRSAVCPQC-AHTQRACVV 1585
++ E G +E YM C VC + +CPQC ++ + +
Sbjct: 1291 RVRRIEMNFDQGQLKELGINKKTLESYMKSSSCLVCKDKLEAEGFLCPQCHSNASESMLS 1350
Query: 1586 LQTR 1589
LQTR
Sbjct: 1351 LQTR 1354
Score = 182 bits (444), Expect = 6e-44
Identities = 103/325 (31%), Positives = 181/325 (55%), Gaps = 13/325 (4%)
Query: 831 ADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGIIVVDSSSR 890
A +++ M +EVH + RG P+P D ++ +F+ D S GI+++ + +
Sbjct: 627 AQYMSVMSLEVHVNTRGSFVPNPEEDEVQCIFFCFQADDEGTDG-SPSQPGIVILSADNN 685
Query: 891 KYLDGCVFNVP--VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEI-L 947
+ VP V S+E++ + ++ +V +DPDI+ G+E+ SWGY++ERA +
Sbjct: 686 NISERVSNQVPFEVHAESSELDLLIRMVGIVREYDPDILTGFEVHGGSWGYLIERARVKY 745
Query: 948 GLDVLKDLSRITEKNRQK------RWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSF 1001
D+ + SR+ ++ + +W N + R+ GR + N+WR R EL L Y+
Sbjct: 746 DYDLCDEFSRMKAQSHGRFGKDNDKWGFNNTSTI-RVTGRHMINIWRAMRAELNLLQYTL 804
Query: 1002 ENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTS 1061
EN + +L R+P Y++A L W+ + S + +Y++++ + +L++ ++I+RTS
Sbjct: 805 ENVAFHLLYRRIPHYTWADLRTWYTNGSARDLSKVLTHYVSRVQLDLEILEQNELISRTS 864
Query: 1062 ELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEP 1121
E ARL G+ ++ V SRGSQF+VESLM R A+P N + +SP+ KQ A E LPL+ EP
Sbjct: 865 EQARLLGVDFFSVFSRGSQFKVESLMFRIAKPENFMLISPSRKQVGGQNALECLPLVMEP 924
Query: 1122 ESRFYSDPVIVL--DFQSLYPSMMI 1144
+ D ++ L D ++ P+ M+
Sbjct: 925 QKYTREDRLLELLKDHINIAPNGMM 949
>UniRef50_Q55AZ3 Cluster: DNA polymerase; n=2; Dictyostelium
discoideum|Rep: DNA polymerase - Dictyostelium discoideum
AX4
Length = 2701
Score = 278 bits (682), Expect = 8e-73
Identities = 159/378 (42%), Positives = 217/378 (57%), Gaps = 13/378 (3%)
Query: 1167 EFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSM 1226
+FGA L LE++ L + SP + F S+R G+ P VK++M
Sbjct: 2156 KFGASWLENKLGLLESISIEHL-NISPNNVIFTDKSIRTGLFPKLLQEVLDTRIMVKRAM 2214
Query: 1227 KM--QNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERA 1284
K + D+ + +++RQLGLK++ANV +GYTAA +SGRMPC+E+ DS+V RETLE A
Sbjct: 2215 KKIDKGDKKMFNILNARQLGLKMMANVAFGYTAATYSGRMPCIEIGDSIVQTARETLEAA 2274
Query: 1285 IKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKV 1344
IK+V + WNAKV+YGDTDS+FVL+PG SR +AFEIGQ IA+ VT+ NP PV L EKV
Sbjct: 2275 IKIVESSKEWNAKVVYGDTDSLFVLLPGVSREKAFEIGQNIANKVTSLNPSPVKLLFEKV 2334
Query: 1345 YQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDM 1404
Y PCIL KKRYVG+ +ESP Q +P ++AKGIETVRRD C K+L +S+ +F D+
Sbjct: 2335 YHPCILVNKKRYVGYKYESPSQTEPIFDAKGIETVRRDSCKVVSKILEKSIRIIFETKDI 2394
Query: 1405 SVVKRLVKATLSRLAETSLPVHELFFTRE-----YHGQAGYRP----GASAPPNEIAKRI 1455
S+VK V ++ + + + F++E Y Q P IA R+
Sbjct: 2395 SLVKSYVIRQWEKILQDRFSLSDFIFSKEVRLGTYKCQQQQNNIDDLNGLPPAALIASRL 2454
Query: 1456 GMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQE-LTRDRSLRPHVAYYATRVXXXX 1514
D R PR G RV ++V G P L+ L TP E L R LR +V YY T+
Sbjct: 2455 MKSDPRLEPRYGERVKYVVVYGEPNSRLIDLVLTPMEFLERSDRLRINVIYYITKQILPA 2514
Query: 1515 XXXXXXXXGVDVFKWWNE 1532
V+V +W+N+
Sbjct: 2515 LDRIFKVLNVNVRQWFND 2532
Score = 244 bits (597), Expect = 2e-62
Identities = 132/366 (36%), Positives = 214/366 (58%), Gaps = 40/366 (10%)
Query: 834 LTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVIND--CPNNHFLKKSLTGIIVV-DSSSR 890
LT + +E+H + R +++P+P D I+++ Y + ++ + + GI++V D
Sbjct: 1716 LTILSVEIHCNSRDNLNPNPEFDSIQSIIYCIRDEQSIEIEGDQYQDIKGILMVNDGHYE 1775
Query: 891 KYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLD 950
+ N + + NE E ++L+ +D DI+ G+E++M+S GY++ERA LGL
Sbjct: 1776 NENNSYGLNCFIKVLHNEFELFKSFVELIRSYDIDILVGFEVQMSSIGYLIERANQLGLS 1835
Query: 951 VLKDLSRI------------TEK--NRQKR---WMKNESDYEG------RIIGRVIFNVW 987
+ ++SR+ T K NR KR + K+ Y +IIGR++ N+W
Sbjct: 1836 LCDEISRVISNTGLTGQNTTTTKGANRTKRTNYFSKDRDQYSFEHFTGMKIIGRIVLNLW 1895
Query: 988 RLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWC--------------DESKMLR 1033
RL RHE+ L +Y+++N + VLN+R YS+ +L++W+ R
Sbjct: 1896 RLLRHEITLDNYTYQNLCFHVLNKRQEEYSFKKLTNWYGGGGGSSNTFQQHQHQHQYQQR 1955
Query: 1034 WIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARP 1093
W +EYYL K ++ D+I RTSE +R++G+ + VLSRGSQ+ VES++LR +P
Sbjct: 1956 WRTLEYYLKKCENNFNLIYAFDLIQRTSEFSRVYGIDFNSVLSRGSQYTVESMLLRLTKP 2015
Query: 1094 LNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTC 1153
N I LSP+ ++ + PE++PL+ +P +R Y+ PV+VLDFQSLYPS+MIAYNYC+STC
Sbjct: 2016 ENFILLSPSREEVLSQPMPESIPLVMDPITRLYNSPVVVLDFQSLYPSIMIAYNYCYSTC 2075
Query: 1154 IGRVQN 1159
+G+VQN
Sbjct: 2076 LGKVQN 2081
Score = 118 bits (285), Expect = 1e-24
Identities = 66/201 (32%), Positives = 107/201 (53%), Gaps = 32/201 (15%)
Query: 2 TKPTAGLDVTYSEFRGTD----IKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQN 57
T+P GLDV S ++ I++VP++RIFG G K CLH+H +FPYF+I +
Sbjct: 30 TRPVQGLDVMVSPLSSSNNNKTIEEVPIVRIFGSTPAGQKCCLHLHQLFPYFFIEYTENS 89
Query: 58 PEPQL----LYQIAASLDKALNIAMKQATSSN------------------------QHVY 89
+ + ++ ++L+ ALN + ++N Q+++
Sbjct: 90 LSTEYVSTYIRKLVSTLNLALNHSNNNNNNNNNNNNNNNNSNNNINSNNNNNVFLKQYIF 149
Query: 90 KISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVELFSSGAILGQTFQPHESHLNFTLQ 149
LV+G PFYGYH + +++K++LY P I + L SG I+ + F+ ESH+ F LQ
Sbjct: 150 NAKLVRGRPFYGYHSTDKIFIKIYLYNPDDINRVANLLRSGMIMSRCFRVFESHIPFILQ 209
Query: 150 FFIDFNLFGMSDIDLQSVQFR 170
F+D+NL GMS+I+ + FR
Sbjct: 210 VFLDYNLSGMSNIEFTNAYFR 230
>UniRef50_A7APT4 Cluster: DNA polymerase family B family protein; n=1;
Babesia bovis|Rep: DNA polymerase family B family protein
- Babesia bovis
Length = 1478
Score = 254 bits (621), Expect = 2e-65
Identities = 168/542 (30%), Positives = 280/542 (51%), Gaps = 51/542 (9%)
Query: 900 VPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGL-DVLKDLSRI 958
+ V YV +E E I EV L DP+I+ GY++ +S GY+ RA +G+ D L+ +SR+
Sbjct: 633 INVAYVQSERELIQEVENLFIKFDPNIIYGYDVARSSIGYIQHRAAAIGVPDFLERISRV 692
Query: 959 TEKNRQK-------RWMKNESDYEGRI----------IGRVIFNVWRLFRHELALSSYSF 1001
K+ ++ +N +GR +GR+IF++ + EL L++ +
Sbjct: 693 PPKHERQITDITTIMTHQNAKLIKGRYKSSSIKPVFCLGRLIFDLADVALRELNLANLTL 752
Query: 1002 ENCMYEVLNERVPSYSYAQLSDWWC---------DESKMLRWIP------------VEYY 1040
EN +Y + +P YS LS W D S P + Y
Sbjct: 753 ENIVYNQFDYLMPVYSQYTLSKWLTTSVQLNASNDPSATTESAPKHGSYKPHAYRAIRYM 812
Query: 1041 LTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALS 1100
L + + + KL + R + ++L+GL + RGSQ+ VES++LR + + S
Sbjct: 813 LFRNYAVLATMDKLVYLRRYATFSKLYGLDIKSAIVRGSQYHVESVLLRFTKSYGYLLPS 872
Query: 1101 PTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRV-QN 1159
PT +Q R +P++ +P+S + PV +LDFQSLY + IAYN C+STC+G + ++
Sbjct: 873 PTQRQVHEQRPSVAIPIVMQPQSGLHLAPVAILDFQSLYSCITIAYNICYSTCLGLLSEH 932
Query: 1160 INGETAYEFGAWRLRIPRSKLEALVKNSL-----IHWSPVGIGFVKTSVRRGVLPXXXXX 1214
+ + G LE + ++ +H +P G+ FV VR G+LP
Sbjct: 933 KKNSGSIKLGIMTYYPEEGILEDITEHRTDKGIGVHITPNGVMFVDKRVREGILPMMLKV 992
Query: 1215 XXXXXQAVKKSMKMQNDEAVK-KAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSV 1273
+ +K++MK + +A+ + Q GLK+++N++ G TA+++SGRMPC ++A+SV
Sbjct: 993 VLQSRRKIKEAMKQPDMDAISLHKLDREQHGLKMLSNLSVGLTASSYSGRMPCSDLAESV 1052
Query: 1274 VAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADN 1333
V+ R + ++V N ++A+VIYGDTDS+F+ PG++ +EA ++IA +
Sbjct: 1053 VSIARALILHCREIVHNN--FDAEVIYGDTDSIFIKFPGKNVVEAEAEAKKIAKKINEAV 1110
Query: 1334 PPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQ 1393
P P+ + +KVY PCIL +KKRY+G + + Y+ KG+ET+R C LL+
Sbjct: 1111 PEPIKILFQKVYSPCILVSKKRYLGL---AHIDGQVFYDDKGVETMRSSECNLTRALLKD 1167
Query: 1394 SL 1395
L
Sbjct: 1168 VL 1169
Score = 73.7 bits (173), Expect = 4e-11
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 65 QIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAV 124
++ + + + + KQ +S H++++ +V+ L FYGYH K+ ++KV+ Y P K
Sbjct: 162 RLMSQSSQRIALLRKQTAASTAHIHRVDVVEHLLFYGYHTKKQKFIKVYHYNPAYTKYLA 221
Query: 125 ELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQS 166
S I G QP+E H+++ + F D+NL GM + L S
Sbjct: 222 GYAYSSGIDGHLLQPYEVHISYFMHFMSDYNLRGMDYVYLSS 263
Score = 55.6 bits (128), Expect = 1e-05
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 1 MTKPTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEP 60
M++PT D +S+ G + VPV+RIFG G + CLH+HG PYFY+ P ++ +P
Sbjct: 25 MSRPTE-FDPHHSD-TGDVVTHVPVIRIFGSTPAGQQVCLHVHGYLPYFYLQVP-KDKDP 81
Query: 61 QLLYQIAASLDKALNIAMKQATSSNQ 86
++ A + + L + ++A + +
Sbjct: 82 ---HKFAKKVHRVLEVVARRAAADKK 104
>UniRef50_P90829 Cluster: DNA polymerase delta catalytic subunit; n=8;
root|Rep: DNA polymerase delta catalytic subunit -
Caenorhabditis elegans
Length = 1081
Score = 252 bits (616), Expect = 8e-65
Identities = 188/605 (31%), Positives = 281/605 (46%), Gaps = 46/605 (7%)
Query: 902 VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEK 961
+I NE +++ + V DPDI+ GY I Y+L+RA++L L + L R EK
Sbjct: 338 IIQCVNEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKVLSLPQVSHLGRQKEK 397
Query: 962 NRQKRWMKNESDYEGR-------IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVP 1014
R S G I GR+IF+V ++ + L SY+ + Y+ L+E+
Sbjct: 398 GSVVRDAAISSKQMGSRVNKSIDIHGRIIFDVLQVVLRDYKLRSYTLNSVSYQFLSEQKE 457
Query: 1015 SYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEV 1074
+ + D + + R + +Y L +R+L KL I E+AR+ G+ +
Sbjct: 458 DVEHNIIPDLQRGDEQTRRRL-AQYCLKDAYLPLRLLDKLMSIINYIEMARVTGVPMNFL 516
Query: 1075 LSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLD 1134
L++G Q ++ S+MLR + N P I+ S + +P FY++P+ LD
Sbjct: 517 LTKGQQIKILSMMLRRCKQNNFFL--PVIEANSGDGEGYEGATVIDPIRGFYNEPIATLD 574
Query: 1135 FQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPV 1194
F SLYPS+MIA+N C++T + Q + E +P
Sbjct: 575 FASLYPSIMIAHNLCYTTLLKSPQGVENEDYIR------------------------TPS 610
Query: 1195 GIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYG 1254
G F S RRG+LP + K MK + DE + + RQL LK+ AN YG
Sbjct: 611 GQYFATKSKRRGLLPEILEDILAARKRAKNDMKNEKDEFKRMVYNGRQLALKISANSVYG 670
Query: 1255 YTAANFSGRMPCVEVADSVVAKGRETL-------ERAIK--LVRENTTWNAKVIYGDTDS 1305
+T A G++PC+E++ SV A GR+ + ER K + +AKVIYGDTDS
Sbjct: 671 FTGATV-GKLPCLEISQSVTAFGRKMIDMTKLEVERIYKKGALDGKCPADAKVIYGDTDS 729
Query: 1306 MFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPD 1365
+ V + +A EIG A V+ PP+ L+ EKVY P +L KKRY G F PD
Sbjct: 730 VMVKFGVETVAQAMEIGLDAAKEVSKIFTPPIKLEFEKVYSPYLLINKKRYAGLYFTKPD 789
Query: 1366 QEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPV 1425
+ KG+ETVRRD CP K+L L +L D K T+S L + +
Sbjct: 790 VH-DKMDCKGLETVRRDNCPLVAKVLGVCLEKLLIERDQQSALDFAKRTISDLLCNKIDI 848
Query: 1426 HELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVR 1485
L ++E ++G + A E+A R+ +D + PR G RV ++ A VP
Sbjct: 849 SLLIISKEL-TKSGDKYQAKQAHVELAARMKKRDAGSAPRLGDRVPYVFVAAAKNVPAYE 907
Query: 1486 LARTP 1490
A P
Sbjct: 908 RAEDP 912
>UniRef50_P28340 Cluster: DNA polymerase delta catalytic subunit;
n=36; Eukaryota|Rep: DNA polymerase delta catalytic
subunit - Homo sapiens (Human)
Length = 1107
Score = 250 bits (613), Expect = 2e-64
Identities = 182/601 (30%), Positives = 283/601 (47%), Gaps = 41/601 (6%)
Query: 919 VNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYEGR- 977
+ I DPD++ GY I+ Y++ RA+ L + L R+ R +S GR
Sbjct: 385 IRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGLCSNIRDSSFQSKQTGRR 444
Query: 978 ------IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKM 1031
++GRV ++ ++ E L SY+ + L E+ ++ ++D +
Sbjct: 445 DTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQNGNDQT 504
Query: 1032 LRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAA 1091
R + V Y L +R+L++L ++ E+AR+ G+ +LSRG Q +V S +LR A
Sbjct: 505 RRRLAV-YCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQA 563
Query: 1092 RPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFS 1151
L L P +K T + EP +Y P+ LDF SLYPS+M+A+N C++
Sbjct: 564 MHEGL--LMPVVKSEGG--EDYTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYT 619
Query: 1152 TCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXX 1211
T + TA + G L ++ I +P G FVKTSVR+G+LP
Sbjct: 620 TLL------RPGTAQKLG-------------LTEDQFIR-TPTGDEFVKTSVRKGLLPQI 659
Query: 1212 XXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVAD 1271
+ K + + D ++ + RQL LK+ AN YG+T A G++PC+E++
Sbjct: 660 LENLLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQ 718
Query: 1272 SVVAKGRETLERAIKLVRENTT------WNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQI 1325
SV GR+ +E+ +LV T +AKV+YGDTDS+ S EA +G++
Sbjct: 719 SVTGFGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREA 778
Query: 1326 ADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCP 1385
AD V+ P P+ L+ EKVY P +L +KKRY G +F S + KG+E VRRD CP
Sbjct: 779 ADWVSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCP 838
Query: 1386 AGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGAS 1445
L+ SL L D + +S L + + +L T+E A G
Sbjct: 839 LVANLVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQ 898
Query: 1446 APPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAY 1505
A E+A+R+ +D + P G RV +++ A GV + P + SL Y
Sbjct: 899 AHV-ELAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPL-FVLEHSLPIDTQY 956
Query: 1506 Y 1506
Y
Sbjct: 957 Y 957
Score = 72.9 bits (171), Expect = 7e-11
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 23 VPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNIAMKQAT 82
VPVLR FG +G+ C HIHG PYFY P P P + L + LN+A+ + +
Sbjct: 122 VPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAP-----PGFGPEHMGDLQRELNLAISRDS 176
Query: 83 SSNQH-----VYKISLVKGLPFYGYHDK-EHLYLKVFLYRPGLIKQAVELFSSG---AIL 133
+ V + L +GYH +L++ + P L+ A L G A L
Sbjct: 177 RGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGL 236
Query: 134 G-QTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQF 169
G +F P+E++++F ++F +D ++ G + ++L + ++
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKY 273
>UniRef50_P52431 Cluster: DNA polymerase delta catalytic subunit;
n=50; root|Rep: DNA polymerase delta catalytic subunit -
Mus musculus (Mouse)
Length = 1105
Score = 249 bits (610), Expect = 4e-64
Identities = 192/670 (28%), Positives = 309/670 (46%), Gaps = 45/670 (6%)
Query: 923 DPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYEGR----- 977
DPD++ GY I+ Y++ RA+ L +D L R+T R +S GR
Sbjct: 387 DPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTGLRSNIRDSSFQSRQVGRRDSKV 446
Query: 978 --IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWI 1035
++GRV ++ ++ E L SY+ + L E+ ++ ++D + R +
Sbjct: 447 ISMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQNGNEQTRRRL 506
Query: 1036 PVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLN 1095
V Y L +R+L++L ++ E+AR+ G+ +L+RG Q +V S +LR A
Sbjct: 507 AV-YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLGYLLTRGQQVKVVSQLLRQAMRQG 565
Query: 1096 LIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIG 1155
L L P +K T + EP +Y P+ LDF SLYPS+M+A+N C++T +
Sbjct: 566 L--LMPVVKTEGG--EDYTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL- 620
Query: 1156 RVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXX 1215
A + G K + +K +P G FVK+SVR+G+LP
Sbjct: 621 -----RPGAAQKLGL--------KPDEFIK------TPTGDEFVKSSVRKGLLPQILENL 661
Query: 1216 XXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVA 1275
+ K + + D ++ + RQL LK+ AN YG+T A G++PC+E++ SV
Sbjct: 662 LSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQV-GKLPCLEISQSVTG 720
Query: 1276 KGRETLERAIKLVRENTTW------NAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAV 1329
GR+ +E+ +LV T NAKV+YGDTDS+ S EA +G++ A+ V
Sbjct: 721 FGRQMIEKTKQLVESKYTVENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWV 780
Query: 1330 TADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVK 1389
++ P P+ L+ EKVY P +L +KKRY G +F S + KG+E VRRD CP
Sbjct: 781 SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDKMDCKGLEAVRRDNCPLVAN 840
Query: 1390 LLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPN 1449
L+ SL + D K +S L + + +L T+E A G A
Sbjct: 841 LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHV- 899
Query: 1450 EIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYY-AT 1508
E+A+R+ +D + P G RV +++ A GV + P + SL YY
Sbjct: 900 ELAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPL-FVLEHSLPIDTQYYLEQ 958
Query: 1509 RVXXXXXXXXXXXXGVDVFKWWNELGYNRTAQQREQTQSGGIEKYMSRERCAVCGVRTIV 1568
++ G + G + + ++ GG+ + R C + G R+++
Sbjct: 959 QLAKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCI-GCRSVI 1017
Query: 1569 --RSAVCPQC 1576
+ AVC C
Sbjct: 1018 DHQGAVCKFC 1027
Score = 68.5 bits (160), Expect = 1e-09
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 23 VPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNIAMKQAT 82
VP+LR FG +G+ C HI G PYFY P P + L ++ L+ A++ +
Sbjct: 120 VPILRAFGVTDEGFSVCCHIQGFAPYFYTPAP-PGFGAEHLSELQQELNAAISRDQRGGK 178
Query: 83 S-SNQHVYKISLVKGLPFYGYHDK-EHLYLKVFLYRPGLIKQAVELFSSGAI---LG-QT 136
S V I L +GYH +L++ L P L+ A L G LG +
Sbjct: 179 ELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPS 238
Query: 137 FQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQF 169
F P+E++++F ++F +D ++ G + ++L + ++
Sbjct: 239 FAPYEANVDFEIRFMVDADIVGCNWLELPAGKY 271
>UniRef50_Q5CWN2 Cluster: DNA polymerase; n=3; Cryptosporidium|Rep:
DNA polymerase - Cryptosporidium parvum Iowa II
Length = 1084
Score = 246 bits (602), Expect = 4e-63
Identities = 178/581 (30%), Positives = 279/581 (48%), Gaps = 42/581 (7%)
Query: 923 DPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEK---NRQKRWMKNE-SDYEGRI 978
DPD++ GY Y+LERA++ L+ +R+ + ++ R+ +E ++
Sbjct: 374 DPDVITGYNCINFDMNYLLERAKLFQLNDFFFFTRLAKTKITSKDTRFSSRAFGTHESKL 433
Query: 979 I---GRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWI 1035
I GR+++++ R E L SYS L E+ Y+ + + + I
Sbjct: 434 INIEGRILWDILETIRREHKLKSYSLNYVSTNFLKEQKEDVHYSMIRGLQDGNPETRKRI 493
Query: 1036 PVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLN 1095
+ Y L +R+++ L + E+AR+ G +LSRG Q +V S +LR + N
Sbjct: 494 AI-YCLKDSILPLRLMKHLKLFPNIIEMARVTGTTIDILLSRGQQIKVTSQILRKCKSTN 552
Query: 1096 LIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIG 1155
L PT+K +S + EP FY DP+ LDF SLYPS+MIA+N C+ST I
Sbjct: 553 F--LMPTVKNQSDGDNQYEGATVLEPLKGFYKDPISTLDFASLYPSIMIAHNICYSTLIP 610
Query: 1156 RVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXX 1215
+ N V L SP G FV +SVR+G+LP
Sbjct: 611 PLNLKN----------------------VPEDLRKTSPTGHSFVLSSVRKGILPLIVEEL 648
Query: 1216 XXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVA 1275
+ KK M+ D + ++ RQL LK AN YGYT A G++PC+E++ S+ +
Sbjct: 649 IAARKKAKKEMEEATDPTLISILNGRQLALKTSANSVYGYTGAVAGGQLPCLELSTSITS 708
Query: 1276 KGRE----TLERAIKLVRENTTW--NAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAV 1329
GR T K+ R+ + +AKV+YGDTDS+ + EA ++G + A ++
Sbjct: 709 YGRAMIDITKNEVEKIYRKENGYSADAKVVYGDTDSVMIQFGVSDIGEAMKLGLEAATSI 768
Query: 1330 TADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVK 1389
+ P+ L+ EKVY P +L KKRY G +F++P Q + KGIETVRRD C K
Sbjct: 769 SKLFVKPIKLEFEKVYCPFLLMNKKRYAGVLFKNP-QFHERIDCKGIETVRRDNCLLVQK 827
Query: 1390 LLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPN 1449
++ L ++ D+ K+ + +S L + + + L ++ G+ Y A
Sbjct: 828 VVDTVLKKILVDKDVEAAKQYTRNVISDLLKNKIDLSLLVVSKSL-GKDDYT--AKLAHV 884
Query: 1450 EIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTP 1490
E+AKR+ ++D + P G RVS++V GA G P A P
Sbjct: 885 ELAKRLKLRDPGSAPNIGDRVSYVVIKGAKGQPQYDRAEDP 925
Score = 44.8 bits (101), Expect = 0.020
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 7/146 (4%)
Query: 12 YSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQN-PEPQLLYQIAASL 70
+S D + P++++FG G ++IH FPY Y P P P+ +I +
Sbjct: 88 FSNKTNQDNIETPIIQLFGSTSTGITVLINIHCFFPYLYCEVPKSTPPNPE---KIKTQI 144
Query: 71 DKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVELFSSG 130
+ L + + Q + K S++ D + + K+ L P L+ + +G
Sbjct: 145 ESGLGATEGKNVLNVQVLKKESIMHYKGDSEIEDSQ--FYKITLQLPNLVPTCRSMIENG 202
Query: 131 AILGQTFQPHESHLNFTLQFFIDFNL 156
L Q +E+++ F L++ ID +L
Sbjct: 203 N-LDCIPQAYEANIPFILRYLIDRDL 227
>UniRef50_P30315 Cluster: DNA polymerase delta catalytic subunit;
n=10; root|Rep: DNA polymerase delta catalytic subunit -
Plasmodium falciparum (isolate K1 / Thailand)
Length = 1094
Score = 243 bits (594), Expect = 4e-62
Identities = 192/701 (27%), Positives = 324/701 (46%), Gaps = 47/701 (6%)
Query: 902 VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRI--- 958
VI+ ++E ++ + + DPD + GY I Y+L R L L LK L RI
Sbjct: 362 VIWFNDEKTLLEAWNEFIIRIDPDFLTGYNIINFDLPYILNRGTALNLKKLKFLGRIKNV 421
Query: 959 --TEKNRQ---KRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERV 1013
T K+ K++ +E+ E I GR+ F+V+ L + + L SY+ +E L E+
Sbjct: 422 ASTVKDSSFSSKQFGTHETK-EINIFGRIQFDVYDLIKRDYKLKSYTLNYVSFEFLKEQK 480
Query: 1014 PSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWE 1073
Y+ ++D +ES R Y + +R++ KL I E+AR+ G +
Sbjct: 481 EDVHYSIMNDLQ-NESPESRKRIATYCIKDGVLPLRLIDKLLFIYNYVEMARVTGTPFVY 539
Query: 1074 VLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVL 1133
+L+RG Q +V S + R + LN + S +K + + + EP +Y +P+ L
Sbjct: 540 LLTRGQQIKVTSQLYRKCKELNYVIPSTYMKVNTNEKYEGAT--VLEPIKGYYIEPISTL 597
Query: 1134 DFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSP 1193
DF SLYPS+MIA+N C+ST I ++ + + ++ KN+L
Sbjct: 598 DFASLYPSIMIAHNLCYSTLIKSNHEVSDLQNDDI---------TTIQG--KNNL----- 641
Query: 1194 VGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTY 1253
FVK +V++G+LP + VK +K + + K ++ RQL LK+ AN Y
Sbjct: 642 ---KFVKKNVKKGILPLIVEELIEARKKVKLLIKNEKNNITKMVLNGRQLALKISANSVY 698
Query: 1254 GYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVR------ENTTWNAKVIYGDTDSMF 1307
GYT A+ G++PC+EVA S+ GR +E+ + V N+ VIYGDTDS+
Sbjct: 699 GYTGASSGGQLPCLEVAVSITTLGRSMIEKTKERVESFYCKSNGYEHNSTVIYGDTDSVM 758
Query: 1308 VLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQE 1367
V + EA +G+ A+ ++ + P+ L+ EKVY P +L KKRY G ++ +P++
Sbjct: 759 VKFGTNNIEEAMTLGKDAAERISKEFLSPIKLEFEKVYCPYLLLNKKRYAGLLYTNPNKH 818
Query: 1368 KPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHE 1427
+ KGIETVRRD C +++ L +L +++ K+ + L ++ +
Sbjct: 819 -DKMDCKGIETVRRDFCILIQQMMETVLNKLLIEKNLNSAIEYTKSKIKELLTNNIDMSL 877
Query: 1428 LFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLA 1487
L T+ G+ Y P E+AK++ +D P G RVS+++ G G A
Sbjct: 878 LVVTKSL-GKTDYE--TRLPHVELAKKLKQRDSATAPNVGDRVSYIIVKGVKGQAQYERA 934
Query: 1488 RTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNELGYNRTAQQREQTQS 1547
P + D +L +Y + + + ++T QT
Sbjct: 935 EDPLYVL-DNNLAIDYNHYLDAIKSPLSRIFEVIMQNSDSLFSGDHTRHKTILTSSQT-- 991
Query: 1548 GGIEKYMSRE-RCAVCGVRTIVRSAVCPQCAHTQRACVVLQ 1587
+ K++ + RC C +I + +C C + + +Q
Sbjct: 992 -ALSKFLKKSVRCIGCN-SSIKKPPLCNHCKENKEFSIYMQ 1030
Score = 52.8 bits (121), Expect = 8e-05
Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 23 VPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNIAMKQAT 82
VP++RI+ KDG +++H FPYFY+ P L+ ++ +++ LN+ Q
Sbjct: 116 VPIIRIYSLRKDGCSVLINVHNFFPYFYVEKPDDFDNEDLI-KLEMLMNENLNL-NSQYK 173
Query: 83 SSNQHVYKISLVK--GLPFYGYHDKEHLYLKVFLYRPGLIKQAVELFSSGAILGQTF--- 137
+ + KI +VK L ++ + K+ +LK+ + P ++ + F +
Sbjct: 174 IYEKKILKIEIVKTESLMYFKKNGKKD-FLKITVLLPKMVPSLKKYFEGIVHVNNKSIGG 232
Query: 138 QPHESHLNFTLQFFIDFNLFGMSDID 163
+E++L F L++ ID + G S I+
Sbjct: 233 IVYEANLPFILRYIIDHKITGSSWIN 258
>UniRef50_Q4N7C1 Cluster: DNA polymerase; n=2; Theileria|Rep: DNA
polymerase - Theileria parva
Length = 1095
Score = 239 bits (584), Expect = 6e-61
Identities = 183/625 (29%), Positives = 297/625 (47%), Gaps = 45/625 (7%)
Query: 899 NVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDV-LKDLSR 957
N ++ NE + + V DPD + GY I + Y+L R+ +L ++ K L+R
Sbjct: 350 NCTILSFDNEEQLLLAWNDFVTFVDPDFLTGYNIILFDLPYLLTRSSVLNIEARFKKLTR 409
Query: 958 ITEKNRQ-KRWMKNESD---YEGRII---GRVIFNVWRLFRHELALSSYSFENCMYEVLN 1010
I N K + N + YE + I GR++F+V+ L R + L SYS +E L
Sbjct: 410 IRSVNCNFKDSISNNNILGLYENKEINIEGRILFDVYDLVRRDYKLKSYSLNFVSFEFLK 469
Query: 1011 ERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQ 1070
++ Y+ + + + R I Y L + ++ KL ++ E++R+
Sbjct: 470 QQKEDVHYSTILKLFNGNNNDRRRI-ASYCLKDSILPLLLINKLLLLYNYIEMSRVTTTP 528
Query: 1071 WWEVLSRGSQFRVESLMLRAARPLNLI--ALSPTIKQRSTMRAPETLPLIFEPESRFYSD 1128
+++RG Q RV + + + +N + ++ K S + E ++ EP ++ +
Sbjct: 529 IKLLITRGQQIRVTMQIYKQCKKMNYVIPVIAGGGKSSSNENSYEGATVL-EPLKGYHKN 587
Query: 1129 PVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSL 1188
P+ VLDFQSLYPS+MIA+N C+ST + N N Y+ P + N +
Sbjct: 588 PISVLDFQSLYPSIMIAHNICYSTLL----NYNTINNYK--------PEDIVTVPGYNDI 635
Query: 1189 IHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLI 1248
F+ R+G+LP + KK M DE +KK RQL LK+
Sbjct: 636 C--------FINVKKRKGILPIIVENLINERKKAKKMMNECKDEMLKKVYDGRQLALKIT 687
Query: 1249 ANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTT------WNAKVIYGD 1302
N YGYT A G +PC++VA ++ + GR + L+ E+ + +++KVIYGD
Sbjct: 688 TNSVYGYTGATSGGFLPCIDVATAITSFGRNMIVNTKDLIEEHFSRKNGFKFDSKVIYGD 747
Query: 1303 TDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMF- 1361
TDS+ + EA ++G+ AD +T+ + P+ L EKVY+P +L +KKRY G +
Sbjct: 748 TDSVMINFGTDDIQEAIDLGKSAADLITSKSVRPITLLFEKVYKPLLLLSKKRYAGLYYV 807
Query: 1362 ESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAET 1421
S + EK + KGIE+VRRD C ++L + L L D+ VK +S L +
Sbjct: 808 NSENYEK--IDCKGIESVRRDFCLLIQQMLEKILYLLLVKLDLDGAIEFVKQKVSELLKN 865
Query: 1422 SLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGV 1481
+ V L T+ G+ Y P E+AK++ +D P G R+S+++ G G
Sbjct: 866 DIDVSLLVITKTL-GKVDYE--QRLPHVELAKKLRKRDPGKAPGVGDRISYIIVKGTKGE 922
Query: 1482 PLVRLARTPQELTRDRSLRPHVAYY 1506
PL A P +T + +L YY
Sbjct: 923 PLFDRAEEPLYVT-ENNLPIDTNYY 946
Score = 39.9 bits (89), Expect = 0.57
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Query: 17 GTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALN- 75
G + +VP++R++G K+ + + PYFYI P P LL + L + N
Sbjct: 92 GDHLTEVPMVRLYGVTKEQQSVLVCVDDFNPYFYIEKP-----PDLLDEYFDDLKRVFNK 146
Query: 76 --IAMKQATSSNQHVYKISLVKGLPFYGYHDK-EHLYLKVFLYRPGLIKQAVELFSSG-- 130
Q S ++V I V+ Y + E +L++ + P ++ SG
Sbjct: 147 YLSEQNQFKKSLRYVLDIQKVRLTSLMMYDENGEKDFLRIVVSSPRMVSNLRSFIESGVD 206
Query: 131 -AILGQTF------QPHESHLNFTLQFFIDFNL 156
++ G + Q +E++L + L+F +D N+
Sbjct: 207 LSVEGDSVSIPLFRQTYEANLPYVLRFLLDNNV 239
>UniRef50_Q308M6 Cluster: DNA polymerase; n=1; Homo sapiens|Rep: DNA
polymerase - Homo sapiens (Human)
Length = 1133
Score = 232 bits (568), Expect = 5e-59
Identities = 197/696 (28%), Positives = 311/696 (44%), Gaps = 63/696 (9%)
Query: 919 VNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYEGR- 977
+ I DPD++ GY I+ Y++ RA+ L + L R+ R +S GR
Sbjct: 385 IRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGLCSNIRDSSFQSKQTGRR 444
Query: 978 ------IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKM 1031
++GRV ++ ++ E L SY+ + L E+ ++ ++D +
Sbjct: 445 DTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQNGNDQT 504
Query: 1032 LRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAA 1091
R + V Y L +R+L++L ++ E+AR+ G+ +LSRG Q +V S +LR A
Sbjct: 505 RRRLAV-YCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQA 563
Query: 1092 RPLNLI----------------ALSPTIKQRSTMRAPETLPLI-FEP-----ESRFYSDP 1129
L+ + P R RA L+ P R+Y P
Sbjct: 564 MHEGLLMPVVKSEGGEDYTGATVIGPLKGVRPQDRAGAAWELLALTPGRGCSPPRYYDVP 623
Query: 1130 VIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLI 1189
+ L F SLYPS+M+A+N C++T + TA + G L ++ I
Sbjct: 624 IATLGFSSLYPSIMMAHNLCYTTLL------RPGTAQKLG-------------LTEDQFI 664
Query: 1190 HWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIA 1249
+P G FVKTSVR+G+LP + K + + D ++ + RQLGLK+ A
Sbjct: 665 R-TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLRRQVLDGRQLGLKVSA 723
Query: 1250 NVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTT------WNAKVIYGDT 1303
N YG+T A G++PC+E++ SV GR+ +E+ +LV T +AKV+YGDT
Sbjct: 724 NSVYGFTGAQV-GKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDT 782
Query: 1304 DSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFES 1363
DS+ S EA +G++ AD V+ P P+ L+ EKVY P +L +KKRY G +F S
Sbjct: 783 DSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSS 842
Query: 1364 PDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSL 1423
+ KG+E VRRD CP L+ SL L D + +S L +
Sbjct: 843 RPDAHDRMDCKGLEAVRRDNCPLVANLVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRI 902
Query: 1424 PVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPL 1483
+ +L T+E A G A E+A+R+ +D + P G RV +++ A GV
Sbjct: 903 DISQLVITKELTRAASDYAGKQAHV-ELAERMRKRDPGSAPSLGDRVPYVIISAAKGVAA 961
Query: 1484 VRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNELGYNRTAQQRE 1543
+ P + SL YY + + L + T ++
Sbjct: 962 YMKSEDPL-FVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGDHTRRKTV 1020
Query: 1544 QT-QSGGIEKYMSRERCAVCGVRTIV--RSAVCPQC 1576
T + GG+ + R C + G RT++ + AVC C
Sbjct: 1021 LTGKVGGLLAFAKRRNCCI-GCRTVLSHQGAVCEFC 1055
Score = 72.9 bits (171), Expect = 7e-11
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 23 VPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNIAMKQAT 82
VPVLR FG +G+ C HIHG PYFY P P P + L + LN+A+ + +
Sbjct: 122 VPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAP-----PGFGPEHMGDLQRELNLAISRDS 176
Query: 83 SSNQH-----VYKISLVKGLPFYGYHDK-EHLYLKVFLYRPGLIKQAVELFSSG---AIL 133
+ V + L +GYH +L++ + P L+ A L G A L
Sbjct: 177 RGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGL 236
Query: 134 G-QTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQF 169
G +F P+E++++F ++F +D ++ G + ++L + ++
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKY 273
>UniRef50_UPI0000499E46 Cluster: DNA polymerase delta catalytic
subunit; n=1; Entamoeba histolytica HM-1:IMSS|Rep: DNA
polymerase delta catalytic subunit - Entamoeba
histolytica HM-1:IMSS
Length = 1077
Score = 226 bits (552), Expect = 5e-57
Identities = 173/594 (29%), Positives = 276/594 (46%), Gaps = 35/594 (5%)
Query: 908 EIETIDEVIK----LVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKN- 962
+ +T +E++K +N D DI GY I + Y+LERA++L + S++ +
Sbjct: 317 DYDTEEELLKGWSDFINAIDVDIFTGYNIMNFDFKYLLERAKVLKVKDFSSFSKLKSSHV 376
Query: 963 --RQKRWMKN-----ESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPS 1015
RQ + ES+ + GR+ F+++++ +H+ L SY+ L ++
Sbjct: 377 SIRQSTFQSKAVGVRESNELINLEGRIPFDMFQVIQHDYKLRSYTLNFVSSNFLGDQKEE 436
Query: 1016 YSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVL 1075
YA ++ I V Y L +++L+KL + E+ R+ G+ +L
Sbjct: 437 VHYADITTLHEGSMDDRNRIAV-YCLKDTYLPIKLLEKLMSLVNGFEMCRVTGIPLSYLL 495
Query: 1076 SRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDF 1135
RG Q +V + + R A NL P ++ T + P FY P+ LDF
Sbjct: 496 PRGQQVKVITQLYRHANAKNLFI--PFFQRTKTNGDKYVGATVINPIKGFYKVPISTLDF 553
Query: 1136 QSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSL------- 1188
SLYPS+MI++N C+ST I ++ + EF KL + L
Sbjct: 554 SSLYPSIMISHNLCYSTLIDGIKTRKDIPSIEFLKTSESEEDRKLYDQIMKKLKDKQLNV 613
Query: 1189 --IHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLK 1246
+ SP G FVK+S R+G+LP + KK M D ++ RQL LK
Sbjct: 614 EDVELSPNGDLFVKSSKRKGILPEILENLLAARKQAKKDMAAATDPFKITVLNGRQLALK 673
Query: 1247 LIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTT------WNAKVIY 1300
+ AN YG+T A G++PC+++A SV + GR +E V E + W+A+V+Y
Sbjct: 674 VSANSVYGFTGAQI-GKLPCMQIASSVTSYGRTMIELTKTTVEEKYSKKNGFPWDAQVVY 732
Query: 1301 GDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFM 1360
GDTDS+ V EA +G++ A VT P P+ L+ EKV+ P +L +KKRY G
Sbjct: 733 GDTDSVMVKFGTSDLAEAIRLGKEAAVFVTTKFPRPINLEFEKVFFPYLLISKKRYAGLY 792
Query: 1361 FESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAE 1420
F D+ + KGIETVRRD C ++ L ++ D+ VK +S L +
Sbjct: 793 FNRADKWDHV-DTKGIETVRRDNCLLVKYVIENVLNKILLDSDVEGAISFVKNMISDLLQ 851
Query: 1421 TSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLV 1474
L + L ++ + Y G A E+ KRI +D+ TG R+ +++
Sbjct: 852 NKLDLSMLIISKTL-SKEDY-AGKQAHV-ELVKRIRERDKTTTINTGDRIPYVI 902
Score = 52.4 bits (120), Expect = 1e-04
Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 24 PVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNIAMKQATS 83
PVL ++G +G +HG PYFYI + + Q L ++ ++ L+ +K
Sbjct: 71 PVLYLYGTTNEGDSVLAMVHGYKPYFYISVEKEYTQ-QELDELKMKCNQQLHSEVKATGD 129
Query: 84 SNQHVYKISLVK---GLPFYGYHDKEHLYLKVFLYRPGLIKQAVELF-SSGAILGQTFQP 139
Q++ + +K L Y + +KE ++K+ L P + + + + + +Q
Sbjct: 130 FEQYILNMENIKNHHSLMNYNF-EKEVFFIKITLRLPKYVPLLRHILQETQRVNNRHYQT 188
Query: 140 HESHLNFTLQFFIDFNLFGMSDIDLQSVQF 169
+E+ L F L+F +D L G S + + + ++
Sbjct: 189 YEADLLFVLRFMVDSGLVGCSWVKVPAKRY 218
>UniRef50_Q8SQP5 Cluster: DNA polymerase; n=1; Encephalitozoon
cuniculi|Rep: DNA polymerase - Encephalitozoon cuniculi
Length = 974
Score = 211 bits (515), Expect = 1e-52
Identities = 160/588 (27%), Positives = 277/588 (47%), Gaps = 46/588 (7%)
Query: 900 VPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRIT 959
V V + E E ++ K DPD++ GY ++ Y+L R EILG++ L R
Sbjct: 249 VNVHWYETEKELLESWKKYFMELDPDVIVGYNVKGFDIPYILSRGEILGIESFSVLGRSR 308
Query: 960 EKNRQKRWMKNESDY------EGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERV 1013
+K R + + + + E I GR+I ++ + R + L SYS + L E+
Sbjct: 309 KKARTRDTTMSSNMFGSITTTEVEIDGRLIIDMMVVIRRDFKLRSYSLNSVSIHFLKEQK 368
Query: 1014 PSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWE 1073
Y+ + + R I Y L +R+ L+++ +EL+R+ G
Sbjct: 369 EDVPYSSIGELQSKNKDTRRRI-ASYCLRDTVLPLRLFNTLNVLINYTELSRVTGTPIEY 427
Query: 1074 VLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVL 1133
+RG ++ +L+ RAA + + P I + + E + EP FY+ PV V+
Sbjct: 428 FFTRGMAIKIFTLVYRAASKEDFMI--PDIDPFESNKTFEG-GFVIEPRKGFYNKPVSVM 484
Query: 1134 DFQSLYPSMMIAYNYCFSTCIGRVQ-NINGETAYEFGAWRLRIPRSKLEALVKNSLIHWS 1192
DF SLYPS+MI++N C++T + + Q I G T G + R K
Sbjct: 485 DFSSLYPSIMISHNLCYTTLLTKEQYRILGGTKTPTGNYFCSAERKK------------- 531
Query: 1193 PVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVT 1252
G+LP + +K+ ++ + D A++ ++ RQL KL AN
Sbjct: 532 -------------GLLPRILTDLLTSRKRIKEELEREKDSALRACLNGRQLAFKLCANSL 578
Query: 1253 YGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVREN------TTWNAKVIYGDTDSM 1306
YG+T A+ G++PC E++ SV GRE + KL+ EN T ++ VIYGDTDS+
Sbjct: 579 YGFTGAS-RGKLPCFEISQSVTGFGREMIILTKKLIEENFSRKNGYTHDSVVIYGDTDSV 637
Query: 1307 FVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQ 1366
V + + F++ ++I++ +T+ PV+L+ EKVY P +L KKRY G ++ +P+
Sbjct: 638 MVDFDEQDIEKVFKMSKEISEFITSKFVKPVSLEFEKVYYPYLLINKKRYAGLLYSNPEN 697
Query: 1367 EKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVH 1426
+ +GIETVRRD C +++ L + ++ K+ VK + L +
Sbjct: 698 PS-KIDTRGIETVRRDNCRLVKEVVETVLEMILYQKNVEKAKQFVKDAVRDLYLGRTDLS 756
Query: 1427 ELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLV 1474
L ++ +AG + + ++A+++ +D P G RV +++
Sbjct: 757 LLVISKSL-TKAGDKYESKQAHVQLAEKLRKRDESTAPVLGDRVPYVI 803
Score = 39.9 bits (89), Expect = 0.57
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 14/140 (10%)
Query: 24 PVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNIAMKQATS 83
PV IFG K G + FPYFY+ P+ E Y+ + + +K
Sbjct: 26 PVFSIFGNTKSGRPVRVLARNFFPYFYVE-PSNGKE----YKEEDIKESVQRLDVKATIL 80
Query: 84 SNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVELFSSG-AILGQ--TFQPH 140
+ V K S++ GY + + ++ L P + L SG ++ G+ F+ +
Sbjct: 81 EVEAVMKQSIL------GYTEGKTRVYRLTLNTPHVSTALKVLLESGISVKGEKVRFRVY 134
Query: 141 ESHLNFTLQFFIDFNLFGMS 160
ES+ F L+F D + GMS
Sbjct: 135 ESNFPFVLRFMCDLGIVGMS 154
>UniRef50_Q22HL1 Cluster: DNA polymerase family B containing protein;
n=12; root|Rep: DNA polymerase family B containing
protein - Tetrahymena thermophila SB210
Length = 1124
Score = 203 bits (496), Expect = 3e-50
Identities = 160/562 (28%), Positives = 263/562 (46%), Gaps = 51/562 (9%)
Query: 893 LDGCVFNVPVIYVSN---EIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGL 949
+D C N+P V + E E + E K + DPDI GY I + Y+LER + L +
Sbjct: 348 MDTCS-NIPGCIVKSFKTETELLLEWEKFLQNVDPDIFLGYNITNFDFPYILERGKQLKI 406
Query: 950 D---------VLKDLSRITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYS 1000
+ + ++RI + + M E GR+ ++ E LSSYS
Sbjct: 407 NNGKYGFMGRIKNTITRIKDGKYLSKAMGMRDTKEMNFEGRIQLDMMMHMHRETKLSSYS 466
Query: 1001 FENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRT 1060
+ Y LNE+ + Q+S +++ + + V Y L ++++QKL I
Sbjct: 467 LNSVSYHFLNEQKEDVHHTQISGLQKGDAETRKRLAV-YCLKDAQLPLKLMQKLMCIYNY 525
Query: 1061 SELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFE 1120
+E+AR+ G+ + +RG Q +V S + R + LNL PT + + E + +
Sbjct: 526 TEMARVTGVPINFLFTRGQQIKVASQLYRRTKLLNLYI--PTERSQGQGDKFEGA-FVLQ 582
Query: 1121 PESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKL 1180
P+ FY P+ LDF SLYPS+M+A+N C+ST I + + + +K
Sbjct: 583 PKKGFYDKPIATLDFASLYPSIMMAHNLCYSTLISK---------------NVAMSMNKD 627
Query: 1181 EALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHS 1240
+ + +P G F K VR+G+LP + K + + D K +
Sbjct: 628 DYTL-------TPHGDYFAKPHVRQGILPDILKDLLAARKKAKNELAKETDPLRKAVLDG 680
Query: 1241 RQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLV------RENTTW 1294
RQL LK+ AN YG+T A G++PC+E++ SV + GR+ +E V +
Sbjct: 681 RQLALKISANSVYGFTGAQV-GQLPCLEISSSVTSFGRQMIEATRDFVLNHYNKANGYNY 739
Query: 1295 NAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTAD-NPPPVALKLEKVYQPCILQTK 1353
++ VIYGDTDS+ V S EA + G++ A+ ++ P+ L+ EKVY P +L +K
Sbjct: 740 DSDVIYGDTDSVMVKFGCDSIEEAMKYGKEAAEMISKKLFINPIKLEFEKVYYPYLLISK 799
Query: 1354 KRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKR---L 1410
KRY G + PD + + KG+E VRRD C +++ L + V+R
Sbjct: 800 KRYAGCFYTKPD-KYDKIDTKGMENVRRDNCQFIREMMNTCLRYILVEHKQDGVQRSIQF 858
Query: 1411 VKATLSRLAETSLPVHELFFTR 1432
+K +S L + + + +L T+
Sbjct: 859 IKGCISDLYQNKVDISKLVITK 880
Score = 65.3 bits (152), Expect = 1e-08
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 24 PVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQ-NPEPQLLYQIAASLDKALNIAMKQAT 82
P++R++G KD + + I GV PY ++ P Q P Q L I L+K T
Sbjct: 111 PIIRMYGVTKDQHSVLVSIRGVVPYLFVRLPPQIQPNAQTLKSIMDDLNKQGKFQRNVKT 170
Query: 83 SSNQHVYKISLVKGLPFYGYHDKEH---LYLKVFLYRPGLIKQAVELFSSG-AILGQTFQ 138
++ + KI +VKG Y K++ YLK++ + P I + G I G F
Sbjct: 171 TN--FIRKIEVVKGESIKYYKGKDYAQDTYLKIYTFIPPFIPALRGMIEKGYTIDGIRFP 228
Query: 139 --PHESHLNFTLQFFIDFNLFGMSDIDLQSVQFR 170
ES++ F L++ ID ++ GM I L +F+
Sbjct: 229 AVTFESNIPFALRYMIDADIVGMGWIKLDKEKFK 262
>UniRef50_A7S2K2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 265
Score = 198 bits (484), Expect = 8e-49
Identities = 83/167 (49%), Positives = 121/167 (72%)
Query: 4 PTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLL 63
P GLD+TYS FR + I++VP++RIFG K G K C H+HG FPY Y+P P + L
Sbjct: 16 PIPGLDLTYSSFRESKIQKVPLVRIFGATKQGQKTCAHVHGAFPYIYVPYDGTEPRDKYL 75
Query: 64 YQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQA 123
Q A S+D A+++++ +A+SS HVY IS++KG PFYGYH++E ++K+ Y P L+ +
Sbjct: 76 RQFATSVDFAVHVSLGRASSSTHHVYDISIIKGRPFYGYHEEETEFIKISFYNPFLVNRV 135
Query: 124 VELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFR 170
VEL SGAI+ +TFQPHE+H+ + LQFF+D+NL+GM+ ++ SV+FR
Sbjct: 136 VELLQSGAIMNKTFQPHEAHIPYLLQFFMDYNLYGMNFLNASSVKFR 182
>UniRef50_Q4SY85 Cluster: Chromosome undetermined SCAF12156, whole
genome shotgun sequence; n=3; Clupeocephala|Rep:
Chromosome undetermined SCAF12156, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 267
Score = 197 bits (481), Expect = 2e-48
Identities = 84/173 (48%), Positives = 125/173 (72%), Gaps = 3/173 (1%)
Query: 1 MTKPTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCP--TQNP 58
+ P LDV YSEFR +++K VPV+RIFG G K CLH+HG+FPY Y+P TQ P
Sbjct: 13 LASPVKDLDVCYSEFRESNVKTVPVVRIFGATPAGQKTCLHLHGIFPYIYVPYDGYTQQP 72
Query: 59 EPQLLYQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPG 118
E + + +A S+D+ALN+ M SS QH++K++LV G PFYGYH KE L++K++LY P
Sbjct: 73 E-RYMRLVAFSIDRALNVTMGNPASSAQHIFKVALVSGKPFYGYHAKEKLFMKIYLYNPQ 131
Query: 119 LIKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFRK 171
++K+ +L SGA++ +++QP+E H+ F LQ FID+NL+GM+ ++L +V+FR+
Sbjct: 132 MVKRVCDLLQSGAVMNKSYQPYEGHIPFLLQLFIDYNLYGMNLLNLAAVKFRR 184
>UniRef50_A6R857 Cluster: DNA polymerase; n=1; Ajellomyces capsulatus
NAm1|Rep: DNA polymerase - Ajellomyces capsulatus NAm1
Length = 1086
Score = 193 bits (471), Expect = 3e-47
Identities = 136/438 (31%), Positives = 219/438 (50%), Gaps = 33/438 (7%)
Query: 1049 RMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRST 1108
R++ KL + +E+AR+ G+ + +LSRG Q + S + R A L+ P ++ ST
Sbjct: 499 RLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQQLVI--PNLRNEST 556
Query: 1109 MRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEF 1168
E +I EP FY P+ LDF SLYPS++ A+N C++T + + I+ E
Sbjct: 557 SEQYEGATVI-EPIRDFYDVPIATLDFASLYPSIIQAHNLCYTTLLKK-STIDAHQMKEG 614
Query: 1169 GAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKM 1228
+ + +P G F + VR+G+L + KK + +
Sbjct: 615 EDYIV------------------TPNGDRFCTSKVRKGLLTQILEELLGARKRAKKELAV 656
Query: 1229 QNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLV 1288
+ D K ++ RQL LK+ AN YG T A G++PC+ +A S + GR+ +E+ + V
Sbjct: 657 ETDPFKKAVLNGRQLALKISANSVYGLTGATV-GKLPCLPIASSTTSYGRQMIEKTKEEV 715
Query: 1289 RENTT------WNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLE 1342
T +AKV+YGDTDS+ V + EA ++GQ+ AD V++ P+ L+ E
Sbjct: 716 EAKYTIANGYSHDAKVVYGDTDSVMVKFGMKDLAEAMKLGQEAADYVSSKFINPIKLEFE 775
Query: 1343 KVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHG 1402
KVY P +L KKRY G + PD + + KGIETVRRD C ++ L ++
Sbjct: 776 KVYFPYLLINKKRYAGLYWTKPD-KYDKMDTKGIETVRRDNCRMVQTVIETVLRKILIDR 834
Query: 1403 DMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRA 1462
D+ + VK T+S L + + + +L T+ + Y A E+A+R+ +D +
Sbjct: 835 DVDGAQSYVKDTISDLLQNKIDMSKLVITKAL-SKKDYT--AKQAHVELAERMKKRDAGS 891
Query: 1463 IPRTGWRVSWLVTCGAPG 1480
P G RV++++ GA G
Sbjct: 892 APTLGDRVAYVIVKGAGG 909
>UniRef50_P15436 Cluster: DNA polymerase delta catalytic subunit;
n=47; cellular organisms|Rep: DNA polymerase delta
catalytic subunit - Saccharomyces cerevisiae (Baker's
yeast)
Length = 1097
Score = 191 bits (466), Expect = 1e-46
Identities = 154/569 (27%), Positives = 267/569 (46%), Gaps = 45/569 (7%)
Query: 923 DPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRI-TEKNRQKRWMKNESDYEGR---- 977
DPD++ GY Y+L RA+ L ++ R+ T K K + + Y R
Sbjct: 394 DPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKESVFSSKAYGTRETKN 453
Query: 978 --IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWI 1035
I GR+ ++ + + E L SY+ L E+ Y+ +SD +S+ R +
Sbjct: 454 VNIDGRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQNGDSETRRRL 513
Query: 1036 PVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLN 1095
V Y L +R+++KL + +E+AR+ G+ + +L+RG Q +V S + R L
Sbjct: 514 AV-YCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFRKC--LE 570
Query: 1096 LIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIG 1155
+ + P ++ +++ E +I EP +Y P+ LDF SLYPS+M+A+N C++T
Sbjct: 571 IDTVIPNMQSQASDDQYEGATVI-EPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCN 629
Query: 1156 RVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXX 1215
+ + R L+ + ++ +I +P G FV T RRG+LP
Sbjct: 630 KAT----------------VERLNLK-IDEDYVI--TPNGDYFVTTKRRRGILPIILDEL 670
Query: 1216 XXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVA 1275
+ KK ++ + D + ++ RQL LK+ AN YG+T A G++PC+ ++ SV A
Sbjct: 671 ISARKRAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTA 729
Query: 1276 KGRETLERAIKLVRENTT------WNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAV 1329
GR + + V+E +A V+YGDTDS+ V EA ++G + A V
Sbjct: 730 YGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLKEAMDLGTEAAKYV 789
Query: 1330 TADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVK 1389
+ P+ L+ EK Y P +L KKRY G + +PD + + KG+ +VRRD C
Sbjct: 790 STLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPD-KFDKLDQKGLASVRRDSCSLVSI 848
Query: 1390 LLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPN 1449
++ + L ++ ++ V+ T++ + + + +L ++ P + P
Sbjct: 849 VMNKVLKKILIERNVDGALAFVRETINDILHNRVDISKLIISKT------LAPNYTNPQP 902
Query: 1450 EIAKRIGMKDRRAI-PRTGWRVSWLVTCG 1477
MK R + P G RV +++ G
Sbjct: 903 HAVLAERMKRREGVGPNVGDRVDYVIIGG 931
Score = 36.3 bits (80), Expect = 7.1
Identities = 34/164 (20%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 8 LDVTYSEFRGT-DIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQI 66
+D S G D V+R FG +G+ ++ G Y Y+P P +
Sbjct: 118 IDAEQSVLNGIKDENTSTVVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSSD-------- 169
Query: 67 AASLDKALNIAMKQATSSNQH-VYKISLVKGLPFYGYH-DKEHLYLKVFLYRPGLIKQAV 124
A+ + +N + + H + I +V +GY D + + K+++ P ++ +
Sbjct: 170 -ANDQEQINKFVHYLNETFDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLR 228
Query: 125 ELFSSGAILGQTFQPHES----HLNFTLQFFIDFNLFGMSDIDL 164
F G + ++ + + ++ +TL+ +D + GMS I L
Sbjct: 229 TAFERGHLSFNSWFSNGTTTYDNIAYTLRLMVDCGIVGMSWITL 272
>UniRef50_A7QST5 Cluster: Chromosome chr4 scaffold_162, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_162, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1126
Score = 167 bits (406), Expect = 2e-39
Identities = 139/484 (28%), Positives = 223/484 (46%), Gaps = 42/484 (8%)
Query: 817 EINSSIVSIENCESADFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLK 876
E+ S I E + A F + ++ + R P+P DP+ V V + F++
Sbjct: 282 ELTSHIPEGEFSKMAPFRI-LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEDQPFVR 340
Query: 877 KSLTGIIVVDSSSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNS 936
+T + S S + V V+ E E + + DPDI+ GY I
Sbjct: 341 NVMT----LKSCSP------IVGVDVMSFETEREVLLAWRDFIREVDPDIIIGYNICKFD 390
Query: 937 WGYVLERAEILGLDVLKDLSRITEKN-RQKRWMKNESDYEGR------IIGRVIFNVWRL 989
Y++ERA +LG+ L RI R K + Y R + GRV F++ ++
Sbjct: 391 LPYLIERASVLGIAEFPILGRIRNSRVRVKDTTFSSRQYGTRESKEVTVEGRVQFDLLQV 450
Query: 990 FRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVR 1049
+ + LSSYS + L+E+ ++ +SD ++ R + V Y L R
Sbjct: 451 MQRDYKLSSYSLNSVSAHFLSEQKEDVHHSIISDLQNGNAETRRRLAV-YCLKDAYLPQR 509
Query: 1050 MLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTM 1109
+L KL I E+AR+ G+ +LSRG +V S +LR A+ NL+ P +KQ +
Sbjct: 510 LLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVL--PNVKQAGSE 567
Query: 1110 RAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFG 1169
+ + E + FY P+ LDF SLYPS+M+AYN C+ T + +++
Sbjct: 568 QGTYEGATVLEANAGFYEKPIATLDFASLYPSIMMAYNLCYCTLV-TPEDVR-------- 618
Query: 1170 AWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQ 1229
+L +P ++ +P G FVK+S+++G+LP + K +K
Sbjct: 619 --KLNLP---------PECVNKTPSGEIFVKSSLQKGILPEILEELLAARKRAKADLKEA 667
Query: 1230 NDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVR 1289
D K + RQL LK+ AN YG+T A G++PC+E++ SV + GR+ +E KLV
Sbjct: 668 KDPLEKAVLDGRQLALKISANSVYGFTGATV-GQLPCIEISSSVTSYGRQMIEHTKKLVE 726
Query: 1290 ENTT 1293
E T
Sbjct: 727 EKFT 730
Score = 99.5 bits (237), Expect = 7e-19
Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Query: 1297 KVIYGDTDSMFVLVPGRSRLE-AFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKR 1355
KVIYGDTDS+ VL G S +E A +G++ A+ ++ P+ L+ EKVY P +L +KKR
Sbjct: 777 KVIYGDTDSVMVLF-GVSTVEAAMNLGREAAEYISGTFMKPIKLEFEKVYYPYLLISKKR 835
Query: 1356 YVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATL 1415
Y G ++ +PD + + KGIETVRRD C L+++ L ++ D+ + VK T+
Sbjct: 836 YAGLLWTNPD-KFDKMDTKGIETVRRDNCLLVKNLVKECLHKILIDRDIPGAVQYVKNTI 894
Query: 1416 SRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVT 1475
+ L + + L T+ + G A E+A+R+ +D P G RV +++
Sbjct: 895 ADLLMNRMDLSLLVITKGL-TKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVII 953
Query: 1476 CGAPGVPLVRLARTP 1490
A G + P
Sbjct: 954 KAAKGAKAYERSEDP 968
Score = 66.1 bits (154), Expect = 8e-09
Identities = 43/173 (24%), Positives = 87/173 (50%), Gaps = 7/173 (4%)
Query: 25 VLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNIAMKQATSS 84
++RIFG ++G+ C ++HG PYFYI CP P + + L+ + + + +
Sbjct: 115 IIRIFGVTREGHSVCCNVHGFEPYFYISCP-PGMGPDDISRFHQVLEGRMR-EVNRNSRV 172
Query: 85 NQHVYKISLVKGLPFYGYH-DKEHLYLKVFLYRPGLIKQAVELFSSG-AILG---QTFQP 139
+ V +I +V+ Y H +LK+ + P ++ + G I G + F
Sbjct: 173 PKFVRRIEMVQKRSIMYYQLQSSHPFLKIVVALPTMVTSCRGILDRGIQIEGFGMKNFVT 232
Query: 140 HESHLNFTLQFFIDFNLFGMSDIDLQSVQFRKSGFSQKSNEVLYDTKENTLTS 192
+ES++ F L+F +D N+ G + I++ + +++K+ + ++ +D + LTS
Sbjct: 233 YESNVLFALRFMVDCNIVGGNWIEVPAGKYKKTAKNLSYCQLEFDCLYSELTS 285
>UniRef50_Q8QNI4 Cluster: DNA polymerase; n=1; Ectocarpus siliculosus
virus 1|Rep: DNA polymerase - Ectocarpus siliculosus
virus 1
Length = 1046
Score = 152 bits (369), Expect = 7e-35
Identities = 143/583 (24%), Positives = 252/583 (43%), Gaps = 55/583 (9%)
Query: 878 SLTGIIVVDSSSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSW 937
S T +V+ + +DG P++ V NE++ +D+ +++ +I+CGY
Sbjct: 252 SYTDGVVICVGDTESVDG----TPLLIVENELQLLDKFREILVERGCNILCGYNTFKFDS 307
Query: 938 GYVLERAEILGLDVLKDLSRITE-------KNRQKRWMKNESDYEGRIIGRVIFNVWRLF 990
++ +RAE G D K LS I + K Q + + I GRV +++ +
Sbjct: 308 AFLYKRAERYGFDGFKKLSFIKDLACDLEVKTLQSAALGKNELKQIIIPGRVEIDLFMVM 367
Query: 991 RHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTV-R 1049
R LSSY + + +YA + C + + Y + SG V +
Sbjct: 368 RRSQKLSSYKLNAVCDKFFGGKKDDVTYADILQA-CTSKDPKKLGVIAKYCYQDSGLVLK 426
Query: 1050 MLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTM 1109
+L K+ + +E+A+L + ++ RG Q + SL+L + K++
Sbjct: 427 LLDKIKEVYDATEMAKLCTVPLTYIVGRGQQIKCMSLILNRIHG-EYVCNYAAAKKKMAA 485
Query: 1110 RAPETL------PLIFEPESRFYS-DPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNING 1162
+ L + + + FY DP++ +DF SLYPS+M C++T + V+ G
Sbjct: 486 DGKQVLNEGYKGASVIDAKKGFYEKDPIVTMDFASLYPSIMRLKQLCYTTIVRDVK-YRG 544
Query: 1163 ETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAV 1222
+ ++ V + F R +L +A
Sbjct: 545 IEGVNYEDHQIS-----------------DGVSVTFAHRPGSRSILCELEEMLGEERKAT 587
Query: 1223 KKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLE 1282
KK MK + D + S+Q K+ N YG+T +G +P VE+A +V + GR+ ++
Sbjct: 588 KKLMKSEKDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIK 647
Query: 1283 RAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLE--------AFEIGQQIADAVTADNP 1334
R + + N VIYGDTDS+ V+ P +E F++G +++ ++
Sbjct: 648 RTKEYAEKEHGCN--VIYGDTDSVMVIFPEHRNIENLGDKMRYCFDMGTKVSKEISEMFG 705
Query: 1335 PPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQS 1394
P+ L+ E +Y +L +KKRY G +E+ + PT KG+ TVRRD P + ++
Sbjct: 706 HPILLEFENIYFKYLLVSKKRYAGLSWETV-EGPPTMTMKGLVTVRRDNAPFVGRCASEA 764
Query: 1395 LCELF----THGDMSVVKRLVKATLSRLAETSLPVHELFFTRE 1433
+ L T G +V K L + TL RL + + +L +E
Sbjct: 765 IHMLMDVDVTDGRGAVKKHLTE-TLLRLERGQISIEDLTIRKE 806
>UniRef50_Q9DKT8 Cluster: DNA polymerase; n=2; Herpesviridae|Rep: DNA
polymerase - Elephantid herpesvirus 1
Length = 1041
Score = 146 bits (354), Expect = 4e-33
Identities = 146/561 (26%), Positives = 246/561 (43%), Gaps = 61/561 (10%)
Query: 895 GCVFNVPVIYV---SNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLD- 950
G +P +Y+ ++E E I+ + V ++ P+ + GY I YV+ R +
Sbjct: 365 GSCAEIPGVYIYECASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQC 424
Query: 951 ---VLKDLSRITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYE 1007
R+T + ++ N + I G VI +++R+ +++ ++ + +
Sbjct: 425 GAFTKMKRGRMTCFKGMESFL-NRCQCKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDM 483
Query: 1008 VLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLF 1067
+L E+ S SY Q+ + + R + Y + ++ KL S +ARL
Sbjct: 484 LLGEKKHSVSYKQIPVLFRRDDDG-RAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLS 542
Query: 1068 GLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYS 1127
+ +V+ G Q R+ + ML AAR LI S T + L EP++ FY+
Sbjct: 543 NISINKVVFDGQQSRIFTCMLAAARREGLIIPSIDEAGEDTYQGATVL----EPKTGFYN 598
Query: 1128 DPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNS 1187
PV V DF SLYPS++ AYN C+ T I N E
Sbjct: 599 TPVAVFDFASLYPSIIQAYNLCYCTLI--TDNYVASLREE----------DITMVTTNTG 646
Query: 1188 LIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKL 1247
+H FVK VR+ +L +AV++ +K D ++ + +QL LKL
Sbjct: 647 RVH------RFVKPHVRKSILSQLLTSWLAERKAVREKLKHCKDPLMQILLDKQQLALKL 700
Query: 1248 IANVTYGYTAANFSGRMPCVEVADSVVAKGRETL------------------ERAIKLVR 1289
N YG+T + G PC+ +A+SV A+GR+ L + A +LV
Sbjct: 701 TCNAVYGFTGVS-KGMFPCLAIAESVTAQGRQLLAVTKQYICDRFNDWTFLTQIAPELVD 759
Query: 1290 ---ENTTWNAKVIYGDTDSMFVLVPGRSRLEAF--EIGQQIADAVTADNPPPVALKLEKV 1344
++ + V+YGDTDS+FVL+ G + + +A PPP+ L+++KV
Sbjct: 760 CPVDSNRFKIDVVYGDTDSVFVLLCGIENADRLYSALPNFVAHITKTLFPPPIKLEVDKV 819
Query: 1345 YQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDM 1404
++ +L KKRYVG + +EK KGI+ VRR+ C + LF+ +
Sbjct: 820 FEKLLLLCKKRYVGVLH---GEEK--LSMKGIDLVRRNVCGFVKNTTLAVIKSLFSDNVI 874
Query: 1405 S-VVKRLVKATLSRLAETSLP 1424
S V+++ T ++ + LP
Sbjct: 875 SEAVQKMSGMTQDQVCKEGLP 895
>UniRef50_P52342 Cluster: DNA polymerase; n=22; Herpesviridae|Rep: DNA
polymerase - Human herpesvirus 7 (strain JI) (HHV-7)
(Human T lymphotropic virus)
Length = 1012
Score = 145 bits (352), Expect = 8e-33
Identities = 140/549 (25%), Positives = 234/549 (42%), Gaps = 58/549 (10%)
Query: 906 SNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAE------ILGLDVLK--DLSR 957
++E E + + P+I+ GY I Y+ R E I G LK S
Sbjct: 337 ASEFELLYAFFLFLKCKSPEILTGYNIINFDLKYLCTRMEKIYNFEIGGFSKLKRGKFSV 396
Query: 958 ITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYS 1017
I + K+++ + + + G + F+++ ++ +++ +Y + LN+ + S
Sbjct: 397 IVPYEQHKKFLNSLTKVN--MSGILCFDMYNVYSSKISAQNYKLDTIAKLCLNQEKENLS 454
Query: 1018 YAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSR 1077
Y ++ + D SK R + Y + V++ K++ +E+A L + +
Sbjct: 455 YKEIPKKFIDGSKG-RAVVGRYCIQDSLLVVQLFTKINYHYEMAEVASLAYITIRCAVFE 513
Query: 1078 GSQFRVESLMLRAARPLNLIALSPTIK-QRSTMRAPETLPLIFEPESRFYSDPVIVLDFQ 1136
G Q ++ +L A+ LN+I S + + EP+ +Y+ P +V DFQ
Sbjct: 514 GQQKKIFPCILHEAKNLNMILPSMNTNFNKGKENVGYKGATVLEPKIGYYATPTVVFDFQ 573
Query: 1137 SLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGI 1196
SLYPS+M+A+N C+ST + + G A + +H PV
Sbjct: 574 SLYPSIMMAHNLCYSTLVVDENAVIGLHADDI------------------LTVHVGPVTH 615
Query: 1197 GFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYT 1256
FVK +VR +L + VK MKM N+ ++ + +QL LK N YG T
Sbjct: 616 RFVKKTVRESILASLLKKWLDKRKEVKMQMKMCNNPVMEMLLDKKQLALKTTCNSVYGVT 675
Query: 1257 AANFSGRMPCVEVADSVVAKGRETLERAIKLVRE-------------------NTTWNAK 1297
A S +PCV +A SV GRE L + + V + T+ +
Sbjct: 676 GATHS-LLPCVAIAASVTCLGREMLCKTVDYVDSAMYSDTFFIEKFGLTRGDFSGTFGIE 734
Query: 1298 VIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTAD-NPPPVALKLEKVYQPCILQTKKRY 1356
VIYGDTDS+FV I IA +T P+ L+ EK+ P IL KKRY
Sbjct: 735 VIYGDTDSLFVTFKNVCPKALKRIAPSIASHITNTLFKHPIKLEFEKILFPLILICKKRY 794
Query: 1357 VGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDM-SVVKRLVKATL 1415
+G + + T KG+E VR+ C +++ + LF D+ ++L T+
Sbjct: 795 IGKL------DDATLVFKGVELVRKTSCDFVKVVVKDIIDLLFWDVDVQKSAEKLSNMTI 848
Query: 1416 SRLAETSLP 1424
+ E +P
Sbjct: 849 QEIYENGVP 857
Score = 40.7 bits (91), Expect = 0.33
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 22/200 (11%)
Query: 14 EFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKA 73
++R I V+++FG + G K C+++ G YFY C YQ L+
Sbjct: 104 QYRHFVIPSGNVIKLFGKTECGKKVCINVFGQNSYFY--CE---------YQCKKELNSR 152
Query: 74 LNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQAVELFSSGAIL 133
+ + + + I V FYGY+ + L + I + +L
Sbjct: 153 ICSLLNSSEIKMSCSFSIESVTKYNFYGYNTEPIKNLFKLSFSNFYISNRI----GKILL 208
Query: 134 GQTFQPHESHLNFTLQFFIDFNL--FGMSDIDLQSVQ-FRKSGFSQ-KSN---EVLYDTK 186
+ +E+ + +FFID NL FG I+ S+Q F KS + + N L+ K
Sbjct: 209 NEGVSVYEAEVEILNRFFIDNNLKSFGWYQINYLSIQEFAKSSNVEIELNCHVSDLFLLK 268
Query: 187 ENTLTSESSCHYEADCMASH 206
E++ C ++ +C++ +
Sbjct: 269 EDSWPLYDCCSFDIECLSQN 288
>UniRef50_Q8IJ38 Cluster: DNA polymerase; n=1; Plasmodium falciparum
3D7|Rep: DNA polymerase - Plasmodium falciparum (isolate
3D7)
Length = 2240
Score = 144 bits (349), Expect = 2e-32
Identities = 76/203 (37%), Positives = 120/203 (59%), Gaps = 3/203 (1%)
Query: 1198 FVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTA 1257
+VK R+G+ P +K+ M M +E V K ++ R LKLI NV GY
Sbjct: 1334 YVKKHKRKGICPLFLEDILKTRIMLKRCMGMY-EERVNKKLNERMGKLKLILNVATGYIG 1392
Query: 1258 ANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLE 1317
ANFSGRMPCV++++S+++ GR L I+ ++EN + K++YGDTDS+F+L ++
Sbjct: 1393 ANFSGRMPCVDISESIISIGRNFLLFIIEYIKENYKF-VKILYGDTDSLFLLNETTDDIQ 1451
Query: 1318 A-FEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGI 1376
+ F++ +I +++ P P+ L EK+Y P +L TKKRY GF F++ +Q+ P + KG+
Sbjct: 1452 SSFKLAYEILNSINNILPLPMYLNFEKIYCPSLLLTKKRYFGFSFKNENQDNPILDLKGV 1511
Query: 1377 ETVRRDGCPAGVKLLRQSLCELF 1399
E++R D C +L Q LF
Sbjct: 1512 ESIRSDQCILVKNILIQIYFILF 1534
Score = 99 bits (238), Expect = 5e-19
Identities = 78/287 (27%), Positives = 135/287 (47%), Gaps = 30/287 (10%)
Query: 899 NVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRI 958
NV + V NE E I ++I + + P + YE + + Y+ +R L LD+ I
Sbjct: 845 NVNICIVENERELIQKLINKILFYSPLSIVSYENDKYNINYINQRC--LALDIGNFYKMI 902
Query: 959 TEKNRQKRWMKNESDYEGRIIGRVIFNVWR-----------LFRHELALSSYSFEN-CMY 1006
+ N QK+++ + Y I G +I ++++ L +H L ++ S +Y
Sbjct: 903 CKLNDQKKFLDLHNAYSRNIKGIIIESLYKLSNTYNTSFENLCKHYLNINIPSINKYTLY 962
Query: 1007 EVLNERVPSYSYAQLS-----------DWW--CDESKML---RWIPVEYYLTKLSGTVRM 1050
N A S D W DE + R I +++YL K+ + +
Sbjct: 963 YWYNYNTKRKIKANGSSTVVNKDIINNDLWNDMDEEHIYFPYRHITIKHYLRKVYFILLI 1022
Query: 1051 LQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMR 1110
K+ + R + + +++RGSQ+ +ES +L+ + N + SP+ K+ R
Sbjct: 1023 YDKICFLKRKMNFCKYIHVDLLSLINRGSQYIIESFLLKMSIKYNYVLYSPSNKEIFDQR 1082
Query: 1111 APETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRV 1157
PLI +P+S P++V DFQSLYPS++IA+N C+STC+G +
Sbjct: 1083 PILHTPLILQPKSSINFFPLLVFDFQSLYPSILIAFNICYSTCLGTI 1129
Score = 57.6 bits (133), Expect = 3e-06
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 17/185 (9%)
Query: 3 KPTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVF---------------P 47
KP D + G +I V +++I G + G + CL+IH +
Sbjct: 24 KPILPFDSLKCKISGKEIPYVCIIQILGLSLLGQRVCLYIHDLMYVYLIVYFILFYCFIS 83
Query: 48 YFYIPCPTQNPEPQLLYQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEH 107
+++I + + +L ++ + L++ A K S+N VY I VK YGY+++
Sbjct: 84 FYFIFFHSPISDDKLEIELCSFLEEEYGKARKDP-SNNVCVYNIERVKRKGIYGYNEECD 142
Query: 108 LYLKVFLYRPGLIKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDL-QS 166
+LK+ P I L + + +E H+N+ L F N++G S+I + ++
Sbjct: 143 DFLKISFLYPNTINYFASLLKKKLFKKRIWDLYEVHINYMLHFLCMKNIYGCSEIYIDKN 202
Query: 167 VQFRK 171
+ FRK
Sbjct: 203 IYFRK 207
>UniRef50_P03198 Cluster: DNA polymerase; n=157; Herpesviridae|Rep:
DNA polymerase - Epstein-Barr virus (strain B95-8)
(HHV-4) (Human herpesvirus 4)
Length = 1015
Score = 142 bits (345), Expect = 5e-32
Identities = 136/513 (26%), Positives = 220/513 (42%), Gaps = 56/513 (10%)
Query: 900 VPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRIT 959
V V +E++ + +L+ +I+ GY + W Y+L+RA + L +I
Sbjct: 348 VEVYEFPSELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYSINPASLGKIR 407
Query: 960 -----EKNRQKRWMKN--ESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNER 1012
E R K ++ + RI G + +++ + R +L+LS Y + +L +
Sbjct: 408 AGGVCEVRRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAK 467
Query: 1013 VPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWW 1072
Y ++ + + R + + Y + + + +L I +E+A++ +
Sbjct: 468 KEDVHYKEIPRLFAAGPEGRRRLGM-YCVQDSALVMDLLNHFVIHVEVAEIAKIAHIPCR 526
Query: 1073 EVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIV 1132
VL G Q RV S +L AA+ N I P+ R + + +P S FY+ PV+V
Sbjct: 527 RVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVLV 582
Query: 1133 LDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEAL-VKNSLIHW 1191
+DF SLYPS++ A+N C+ST I GE E LR P E+ + + H
Sbjct: 583 VDFASLYPSIIQAHNLCYSTMI-----TPGE---EHRLAGLR-PGEDYESFRLTGGVYH- 632
Query: 1192 SPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANV 1251
FVK V L +A+KK + D + + +QL +K N
Sbjct: 633 ------FVKKHVHESFLASLLTSWLAKRKAIKKLLAACEDPRQRTILDKQQLAIKCTCNA 686
Query: 1252 TYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRE-------------------NT 1292
YG+T +G PC+ +A++V +GR LERA V N
Sbjct: 687 VYGFTGV-ANGLFPCLSIAETVTLQGRTMLERAKAFVEALSPANLQALAPSPDAWAPLNP 745
Query: 1293 TWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTAD-NPPPVALKLEKVYQPCILQ 1351
+VIYGDTDS+F+ G S E +A T P++L+ EK + +L
Sbjct: 746 EGQLRVIYGDTDSLFIECRGFSESETLRFADALAAHTTRSLFVAPISLEAEKTFSCLMLI 805
Query: 1352 TKKRYVGFMFESPDQEKPTYEAKGIETVRRDGC 1384
TKKRYVG + + KG+E VR+ C
Sbjct: 806 TKKRYVGVLTDGKTL------MKGVELVRKTAC 832
>UniRef50_A2DY14 Cluster: DNA polymerase; n=2; Trichomonas
vaginalis|Rep: DNA polymerase - Trichomonas vaginalis G3
Length = 1045
Score = 140 bits (340), Expect = 2e-31
Identities = 95/289 (32%), Positives = 145/289 (50%), Gaps = 9/289 (3%)
Query: 1192 SPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANV 1251
SP F K GVLP +A KK M+ D KK RQL LK+ AN
Sbjct: 572 SPNHCFFAKHDEFPGVLPEILKELLAARKATKKLMEEATDPMQKKVFDKRQLALKISANS 631
Query: 1252 TYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLV------RENTTWNAKVIYGDTDS 1305
YG+T A G++PC+++++SV A GR +E +LV + + +A VIYGDTDS
Sbjct: 632 VYGFTGATV-GKLPCLQISESVTAYGRSMIEMTKELVENKYNKQNGYSDDAHVIYGDTDS 690
Query: 1306 MFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPD 1365
+ V + EA + G++ A+ V+ PPP+ + EK Y+P +L +KK Y G ++ +
Sbjct: 691 VMVNFGNITLEEAIKRGKEAANYVSDHFPPPIHIDFEKAYKPYLLISKKHYAGLLWTN-H 749
Query: 1366 QEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPV 1425
+ +AKGIE VRRD C L+++ L L D K VK +S L + +
Sbjct: 750 IKYDKIDAKGIEAVRRDNCRLVQGLVQKVLTLLLVKEDPGSAKVFVKKIVSDLVSDHIDL 809
Query: 1426 HELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLV 1474
L ++ +A G A E+A R+ +D + PR G R+ +++
Sbjct: 810 SFLVISKGLSKKADQYKGKQAHV-ELADRMMKRDPGSAPRMGDRIPFVM 857
Score = 77.8 bits (183), Expect = 2e-12
Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 11/253 (4%)
Query: 907 NEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSR-ITEKNRQK 965
NE + + + + DP+I+ GY I Y++ER+ + + +L R + E + K
Sbjct: 310 NEKDLLINFQRFIQWVDPEIITGYNICGFDIPYLVERSIAIKANEFCELGRYVKEFSTCK 369
Query: 966 RWMKNESDYEGR------IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYA 1019
K R I GR+ +++ +++ L SYS + + ++ Y+
Sbjct: 370 ETTKGTKQLGYRETKDVDINGRIQYDMMIAIKNDFKLRSYSLNAVSAQFIGDQKEDVHYS 429
Query: 1020 QLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGS 1079
+S + + Y + ++++ KL + T EL+R+ + VL+RG
Sbjct: 430 MISKLQNGSDTDRHRLAI-YCVKDAYLPLQLMNKLLSVLTTIELSRVCHVPVNYVLNRGQ 488
Query: 1080 QFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLY 1139
Q RV S +L + NLI + T ++ T + EP + +Y+ P+ LDF SLY
Sbjct: 489 QIRVFSQILYKSVRRNLIIPALTSQKSDDQYQGAT---VIEPSTGYYTTPIPTLDFNSLY 545
Query: 1140 PSMMIAYNYCFST 1152
PS+MI +N C+ST
Sbjct: 546 PSIMIGHNICYST 558
Score = 56.8 bits (131), Expect = 5e-06
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 14/186 (7%)
Query: 22 QVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNIAMKQA 81
+V V+ I G +G+ H+HGV PYFY P L L LN A+
Sbjct: 61 EVAVVDIHGCDNEGHSILCHVHGVIPYFYTSIPYNFTAEGL-----EELKNKLNSALSPF 115
Query: 82 TSSNQHVYKISLVKGLPFYGY-HDKEHLYLKVFLYRPGLIKQAVELFSSGAIL-----GQ 135
N VY V+ YG+ + + Y+KV P + + S I
Sbjct: 116 NKGNLVVYSCEFVEKRNIYGFTKEAKSRYVKVCTTLPKHVASCRRVLESNQIQLSCSPSY 175
Query: 136 TFQPHESHLNFTLQFFIDFNLFGMS--DIDLQSVQFRKSGFSQKSNEVLYDTKENTLTS- 192
+FQ ES+++F +++ D + G S ++ Q+ R+ + N+ D N++
Sbjct: 176 SFQTFESNVDFIIRYMDDVGITGCSWLKLEAQNYDIRRVNDRRSINQFEIDCNYNSIIPL 235
Query: 193 ESSCHY 198
+ C Y
Sbjct: 236 GTECEY 241
>UniRef50_P30321 Cluster: DNA polymerase; n=67; Phycodnaviridae|Rep:
DNA polymerase - Paramecium bursaria Chlorella virus 1
(PBCV-1)
Length = 913
Score = 138 bits (335), Expect = 9e-31
Identities = 132/494 (26%), Positives = 222/494 (44%), Gaps = 38/494 (7%)
Query: 990 FRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVR 1049
FR L SYS N L ++ Q+ + + ++ R I Y ++
Sbjct: 345 FRKNRNLESYSLNNVSKLYLGDQKNDLPAMQIFEKFEGNAED-RAIIAAYAAKDTDLPLK 403
Query: 1050 MLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTM 1109
+L+K+ I+ +E+A + + RG Q R S ++ AR +N P K +T
Sbjct: 404 LLKKMAILEDLTEMANAVKVPVDYINFRGQQIRAFSCLVGKARQMNYAI--PDDKAWATE 461
Query: 1110 RAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCI--GRVQNINGETAYE 1167
E ++ + +++ P+ LDF SLYPS++ A+N T + R +N+ G YE
Sbjct: 462 GKYEGATVLDAKKGAYFT-PIAALDFASLYPSIIRAHNMSPETLVMEKRFENVPGVEYYE 520
Query: 1168 FGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMK 1227
+ K + KN +T +GV+P + KK M
Sbjct: 521 -----IETGLGKFKYAQKND------------ETGEGQGVVPALLDDLAKFRKLAKKHMA 563
Query: 1228 --MQNDEAVKKAMH-SRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERA 1284
+N + K+A++ ++Q K++ N YG+ A+ G +PCV +A SV A GR+ +E
Sbjct: 564 EAKRNGDDFKEALYDAQQRSFKVVMNSVYGFLGAS-KGFIPCVPIAASVTATGRKMIEHT 622
Query: 1285 IKLVRENTTWNAKVIYGDTDSMFVLV--PG---RSRLEAFEIGQQIADAVTADNPPPVAL 1339
K E ++VIYGDTDS+ V + P E F++ + +A +T D P L
Sbjct: 623 AKRAVELLP-GSEVIYGDTDSVMVKMKLPDDKVHDMDEQFKMAKWLAGEITKDFRAPNDL 681
Query: 1340 KLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELF 1399
+ EK+Y P IL +KKRY FE PD EK + KG+ VRRD P +L++SL +
Sbjct: 682 EFEKIYYPYILYSKKRYAAVKFEEPD-EKGKVDVKGLALVRRDFSPITRDILKESLDTIL 740
Query: 1400 THGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKD 1459
D + ++ + P+ + ++ + GY+ P +A +I +
Sbjct: 741 YKKDTPTAVSETLERIRKVLDNEYPMEKFMMSKLL--KTGYK-NECQPHLHVANKIYERT 797
Query: 1460 RRAIPRTGWRVSWL 1473
+P +G RV ++
Sbjct: 798 GFPVP-SGARVPFV 810
>UniRef50_A5KDT7 Cluster: DNA polymerase; n=1; Plasmodium vivax|Rep:
DNA polymerase - Plasmodium vivax
Length = 1866
Score = 137 bits (331), Expect = 3e-30
Identities = 71/187 (37%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
Query: 1198 FVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTA 1257
+VK R+G+ +K+ +++ D K + R LK+I NV GY
Sbjct: 1123 YVKKKKRKGICTLFLEDMLKTRIMLKRCIQIY-DHKTGKRLVERMGKLKMILNVATGYIG 1181
Query: 1258 ANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLE 1317
ANFSGRMPCV++++S++ G+ L I+ +R N + KV+YGDTDS+F+L
Sbjct: 1182 ANFSGRMPCVDISESIICTGKNFLLYIIEYIRANYQY-VKVLYGDTDSLFLLNEMNDISY 1240
Query: 1318 AFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIE 1377
F I I V P P+ L EK+Y P +L TKKRY GF ++ EKPT E KG+E
Sbjct: 1241 TFRIAHDILKNVNGILPSPMYLNFEKIYCPSLLMTKKRYFGFAYKKESDEKPTLELKGVE 1300
Query: 1378 TVRRDGC 1384
++R D C
Sbjct: 1301 SIRSDQC 1307
Score = 104 bits (249), Expect = 2e-20
Identities = 79/292 (27%), Positives = 140/292 (47%), Gaps = 35/292 (11%)
Query: 892 YLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDV 951
+ D +V + NE + I ++I +N + P + YE + + Y+ +R L LD+
Sbjct: 669 HFDANYHSVNIHIAQNERDLIKKLIDKINFYSPLSIISYENDKYNVSYINQRC--LALDM 726
Query: 952 LKDLSRITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNE 1011
+ I++ N Q+ + + + Y I GR+I ++++L ++S+ SFEN LN
Sbjct: 727 GSFYTHISKLNDQREFTELNNAYNKNIKGRLIESLYKLS----SVSNTSFENLCKHYLNV 782
Query: 1012 RVPS---------YSYAQLSDWWCDESKM-------------------LRWIPVEYYLTK 1043
VPS YSYA + DE R + V Y L +
Sbjct: 783 IVPSISRHTLYRWYSYAA-GEARSDEKGARERGRGGDGAIGGEPAYYPYRHLTVRYLLKR 841
Query: 1044 LSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTI 1103
++ + + K+ + R + + +++RGSQF +ES +++ + SP+
Sbjct: 842 VNLLLLIYDKIGFLKRKMNFCKYLHVDLLSLINRGSQFIIESFLVKLCMRNGFLLYSPSN 901
Query: 1104 KQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIG 1155
K+ R +PL+ +P+S P++V DFQSLYPS++IA+N C+STC+G
Sbjct: 902 KEIMEQRPILHIPLVLQPKSSINFFPLLVFDFQSLYPSIVIAFNICYSTCLG 953
Score = 65.3 bits (152), Expect = 1e-08
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 17/198 (8%)
Query: 3 KPTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQL 62
KP+ D + I V++I G + G CL++H V N E +L
Sbjct: 24 KPSLPFDSLVCKINNRKIPHACVIQILGLSYYGQSVCLYVHDV---------NANLEAEL 74
Query: 63 LYQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPGLIKQ 122
+ KA KQ + N +Y I VK YGY ++ +LK++ P I
Sbjct: 75 CQFLEEEYGKA-----KQDKTQNVCIYNIERVKKKCIYGYKEEAEDFLKIYFLYPHTINY 129
Query: 123 AVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMSDIDL-QSVQFRKSGFSQKSNEV 181
L + ++ +E H+++ L F N++G S+I + ++V FR+ FS+ + E
Sbjct: 130 FASLLKKKLFKNRIWELYEVHISYMLHFLCSKNIYGCSEIYVDKNVFFRREFFSEINFES 189
Query: 182 LYDTKENTLTSESSCHYE 199
TKE ++ C E
Sbjct: 190 F--TKEEKWNVKNKCDME 205
>UniRef50_Q8TSB3 Cluster: DNA polymerase; n=4; Methanosarcinaceae|Rep:
DNA polymerase - Methanosarcina acetivorans
Length = 937
Score = 134 bits (325), Expect = 1e-29
Identities = 155/646 (23%), Positives = 278/646 (43%), Gaps = 73/646 (11%)
Query: 902 VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEK 961
V+ +E E +++ +++ +DPDI+ GY + Y+ ER + L S +
Sbjct: 247 VLSCMDETEMLNKFFEIICEYDPDIVAGYNHQDFDIPYITERVKALVAKGETINSVVGRD 306
Query: 962 NRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQL 1021
+ K + GRV+ + L R +L Y+ E+L+ ++
Sbjct: 307 GSPIGYRKFGLITRTEMKGRVVVDALPLVRRAFSLKQYTLRAVSKELLSREKLDVPPLEM 366
Query: 1022 SDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQF 1081
+ W D R V+Y + ++ +L ++++ LA++ G E++ G
Sbjct: 367 EEHWNDSGDKFRKF-VDYARRDSELALELVLELRLLDKYIALAQVSGSLLQEIVDGGQTS 425
Query: 1082 RVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPL----IFEPESRFYSDPVIVLDFQS 1137
VE+L+LR + + L + S R + L + EP+ + V++LD++S
Sbjct: 426 MVETLLLREFGLKDRVILPKPGDELSAERYDMSSDLKGGEVLEPKKGLLEN-VLILDYKS 484
Query: 1138 LYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIG 1197
LYP++M+A+N C++T + R +G+T +K P G
Sbjct: 485 LYPTIMMAHNLCYTTVVTR-DRPDGKT-------------------IK------PPSGGE 518
Query: 1198 FVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTA 1257
FV V RG++P KK MK +DE + + + QL +K++ N YGY +
Sbjct: 519 FVPPEVFRGIVPSILEDLLNKRGDTKKRMKRTSDENEHRVLDATQLAIKILLNSFYGY-S 577
Query: 1258 ANFSGRMPCVEVADSVVAKGRET------------------------LERAIKLVRENTT 1293
R+ + +A++V + GR LE A KL ++
Sbjct: 578 GYARARLYSLTLANAVTSFGRSNILNTRDLINGRIGKIVLRNSAALLLEEAGKLSPQDRI 637
Query: 1294 WNAKVIYGDTDSMFVLVPGRSRLEAFE---IGQQIADAVTADNPPPVALKLEKVYQPCIL 1350
V YGDTDS+FV + L E +G ++++ V+A P P+ L+ E V + +L
Sbjct: 638 VELSVAYGDTDSVFVHCKAKGDLSLEEVSLVGNRLSEIVSASLPDPMELEFESVAKRALL 697
Query: 1351 QTKKRYVGFMFESPDQE-KPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKR 1409
KKRY ++FE + + + KG+ETVRRD C L + L + GD+
Sbjct: 698 IAKKRYALWLFEPRNSGWENKIKVKGMETVRRDWCELTSITLNRVLEFVLIEGDVDKAVE 757
Query: 1410 LVKATLSRL-----AETSLPVHELFFTREYHGQA-GYRPGASAPPNEIAKRIGMKDRRAI 1463
V+ +S + + + + +L TR +A Y+ P +A+ + K +
Sbjct: 758 HVRKVVSDVRNLDPGKDAGIIEKLVLTRTLTRKADSYK--NKQPHLTVAENL-KKRTGIM 814
Query: 1464 PRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATR 1509
P G R+ +++T G G+ V A P + R+ ++ V YY +
Sbjct: 815 PSIGTRIPFVITAG-KGL-FVDRAEDP-DYVRENNVPIDVDYYVKK 857
>UniRef50_O41930 Cluster: DNA polymerase; n=128;
Gammaherpesvirinae|Rep: DNA polymerase - Murid
herpesvirus 4 (MuHV-4) (Murine gammaherpesvirus 68)
Length = 1027
Score = 132 bits (319), Expect = 8e-29
Identities = 128/487 (26%), Positives = 222/487 (45%), Gaps = 59/487 (12%)
Query: 925 DIMCGYEIEMNSWGYVLERA-EILGLDVLKDLSRITEKNRQKR--------WMKNESDYE 975
+ + GY I Y+++RA +I +D + +T + + R +M+ ++
Sbjct: 369 EFISGYNIANFDLPYIIDRATQIYNIDCTQFTKLVTMRTFEVRKPIDSGAGFMRAQTKI- 427
Query: 976 GRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWI 1035
RI G + +++ + + +L+LS Y LN SY + + E R
Sbjct: 428 -RISGVIPVDMYTVCKDKLSLSDYKLNTVAKHCLNMEKEDVSYKDIPILF-KEGPTGR-A 484
Query: 1036 PVEYYLTKLSGTVRMLQKLDIIN-RTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPL 1094
+ Y S V L K + + +E+ +L + VL+ G Q RV S +L AAR
Sbjct: 485 KIGTYCVMDSQLVLDLLKYFMAHIEIAEIGKLAKIPVRRVLTDGQQIRVFSSLLDAARRE 544
Query: 1095 NLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCI 1154
N I S K ++ T + +P + FY+ PV+V+DF SLYPS++ A+N C+ST I
Sbjct: 545 NYILPSNQAKCSNSGYQGAT---VIDPITGFYNTPVLVVDFASLYPSIIQAHNLCYSTII 601
Query: 1155 --GRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXX 1212
++Q T ++ + L + +H FVK + +L
Sbjct: 602 PDNKLQMFPNLTPADYETFTL-----------PSGTVH-------FVKKHKKCSLLSRLL 643
Query: 1213 XXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADS 1272
+ ++ + D K + +QL +K+ N YG+T SG +PC+++A++
Sbjct: 644 TKWLAKRKEIRTQLAACEDPITKTILDKQQLAIKVTCNSVYGFTGVA-SGMLPCLQIAET 702
Query: 1273 VVAKGRETLERAIKLVRE----------NTTWNA----KVIYGDTDSMFVLVPGRSRLEA 1318
+ +GR+ LE++ + + T+N +VIYGDTDS+FV G + E
Sbjct: 703 ITFQGRKMLEKSRAYIENMSSATLGALMHKTYNPDAYFRVIYGDTDSLFVETQGYTLEEV 762
Query: 1319 FEIGQQIADAVT-ADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIE 1377
E G+ +AD T A P+ L+ EK ++ ++ TKKRYVG + + KG++
Sbjct: 763 VEFGEMLADNTTKALFVQPIKLEAEKTFKSLLMITKKRYVGTLSNN------KLLLKGVD 816
Query: 1378 TVRRDGC 1384
VR+ C
Sbjct: 817 LVRKTAC 823
>UniRef50_O71121 Cluster: DNA polymerase; n=9; Cytomegalovirus|Rep:
DNA polymerase - Rhesus cytomegalovirus (strain 68-1)
(RhCMV)
Length = 1035
Score = 129 bits (311), Expect = 7e-28
Identities = 111/386 (28%), Positives = 172/386 (44%), Gaps = 51/386 (13%)
Query: 1063 LARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPL----I 1118
+ARL + V+ G Q R+ + +L + I P K P + +
Sbjct: 518 IARLARIPMRRVIFDGQQIRIYTSLLDECACRDFIM--PNHKGADNSSEPTDVSYQGATV 575
Query: 1119 FEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRS 1178
FEPE +YSDPV+V DF SLYPS+++A+N C+ST + GE+ E + +
Sbjct: 576 FEPEVGYYSDPVVVFDFASLYPSIIMAHNLCYSTFVAP----GGESPPESDVLTVELE-- 629
Query: 1179 KLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAM 1238
S + FVK +VR VL +AV+++M+ +D + +
Sbjct: 630 -------------SGLSYRFVKNTVRNSVLSELLTKWVSQRRAVRETMRSCHDPVKRMLL 676
Query: 1239 HSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVREN------- 1291
QL LK+ N YG+T +G MPC+ +A S+ GR+ L R + V EN
Sbjct: 677 DKEQLALKVTCNAFYGFTGV-VNGMMPCLPIAASITRIGRDMLMRTSQFVEENFAEPCFL 735
Query: 1292 -TTWN----------AKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVT-ADNPPPVAL 1339
+N KVIYGDTDS+FV G + E G +A +T P+ L
Sbjct: 736 HNFFNREDYSGDPVAVKVIYGDTDSVFVCYRGVTAAALIERGPSLAHYITQCLFVDPIKL 795
Query: 1340 KLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELF 1399
+ EKV+ ++ KKRY+G + + KG++ VR+ C + R + LF
Sbjct: 796 EFEKVFGSLMMICKKRYIGKIVGETE-----LSMKGVDLVRKTSCEFVKNVTRDIIQLLF 850
Query: 1400 THGDMS-VVKRLVKATLSRLAETSLP 1424
++S +L + TL L +P
Sbjct: 851 DDPEVSRAAVQLSRLTLDELKMQGVP 876
>UniRef50_A0D7P3 Cluster: DNA polymerase; n=1; Paramecium
tetraurelia|Rep: DNA polymerase - Paramecium tetraurelia
Length = 1344
Score = 127 bits (306), Expect = 3e-27
Identities = 135/551 (24%), Positives = 240/551 (43%), Gaps = 46/551 (8%)
Query: 907 NEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKR 966
+E + ++ V DPD + G+EI+ S ++ R L ++ +SR+ ++ + +
Sbjct: 477 SEYSMLSSFLQDVEAIDPDGLIGHEIQKKSIEQLVARIAKLKVNEWNRMSRLQKREQIPK 536
Query: 967 WMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWC 1026
+ S Y IGR++ ++W + + + YS E L + + ++ +
Sbjct: 537 NIFLRSKY--LTIGRLVIDLWIQAKDMIKSNDYSITYLAKEFLKQDCQQLE-SDVTKNYT 593
Query: 1027 DESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESL 1086
+ ++ + + ++ L + +++ QKL+II+ T +L + G W L R E L
Sbjct: 594 ENAQSYQTL-LQLSLKETKFVIQITQKLNIISLTRQLTNICGNVWNRSLLNQRAERNEML 652
Query: 1087 MLRA--------ARPLNLIALSPTIK--QRSTMRAPETLP--LIFEPESRFYSDPVIVLD 1134
++ ++ I LS K Q + +T L+FEP++ Y+ V++LD
Sbjct: 653 LMHEFFLRGFLLPDKMSKINLSDEEKDQQIKEQESKKTYGGGLVFEPKADIYTQYVLLLD 712
Query: 1135 FQSLYPSMMIAYNYCFSTCIGRVQNIN-GETAYEFGAWRLRIPRSKLEALVKNSLIHWSP 1193
F SLYPS+++ YN CF+T N +T E + + +S K+ +
Sbjct: 713 FNSLYPSIIMEYNICFTTVQRDKINFEVDKTQLEEEPTQTKPQKSNKNKKKKDQTQDEND 772
Query: 1194 VG------IGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKL 1247
IG V G+LP + KK M ++ +K+ + +QL +KL
Sbjct: 773 TKEKIKDFIGSVDPDAGSGILPQIIEKLVNMRKQAKKEMS-RSTGLMKQIYNIKQLAVKL 831
Query: 1248 IANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMF 1307
+AN YG + S R V +A + KGR L + V + VIYGDTDSM
Sbjct: 832 VANSIYGCLGFS-SSRFYAVGIASLITQKGRSILMDSKNTVERSND----VIYGDTDSMM 886
Query: 1308 VLVPGRSRL-EAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQ 1366
+ L E +G QIA + V L ++ V+ +L KK+Y G ++ +
Sbjct: 887 ICARQEKNLSEILVLGTQIAKEINKKYKKLV-LAIDGVFDTLLLMKKKKYAGIKIDNLED 945
Query: 1367 ------EKPTY--EAKGIETVRRDGCPAGVKLLRQSLCELF-------THGDMSVVKRLV 1411
E+P + E KGI+ VRR+ C K+ L L HGD+ + + +
Sbjct: 946 LMTGQTEQPKFKMEVKGIDIVRREFCDISKKMQSHVLDILLKTKNRDDIHGDLITLMQEI 1005
Query: 1412 KATLSRLAETS 1422
++ L+ S
Sbjct: 1006 RSMFDALSGNS 1016
>UniRef50_Q4JF81 Cluster: DNA polymerase; n=1; Heterosigma akashiwo
virus 01|Rep: DNA polymerase - Heterosigma akashiwo virus
01
Length = 1144
Score = 124 bits (300), Expect = 2e-26
Identities = 112/418 (26%), Positives = 190/418 (45%), Gaps = 39/418 (9%)
Query: 900 VPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLD--VLKDLSR 957
+ +I NE E I + DPDI+ GY I W Y+ R + LG++ +L SR
Sbjct: 255 IDIIQCDNEGELIIRWFHYIAEIDPDIITGYNIFGFDWEYIKGRVDFLGIEDEILSVASR 314
Query: 958 ITE-KNRQKRWMKNES---DYEGRII---GRVIFNVWRLFRHELALSSYSFENCMYEVLN 1010
I + K+R N S D E + + GR+ F+ + + E L SY +N Y
Sbjct: 315 IDKLKSRFMTKELNSSAFGDNEFKFLEMPGRIEFDFFSYIKREHKLESYKLDNVAYHFTK 374
Query: 1011 ERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQ 1070
++ + + +R + EY + + +++KL +I E++++ +
Sbjct: 375 QKKHDVKPMDIFIKLMGTPEDVREV-AEYCVQDTFLIIELMKKLCVIPNLIEMSKVTRVP 433
Query: 1071 WWEVLSRGSQFRVESLMLRAARPLNLIALSPTIK-----QRSTMRAPETLPLIFEPESRF 1125
+ ++ RG Q +V S + A N++ + +K R+ T + S
Sbjct: 434 FEYLILRGQQIKVFSQIFYEAMKENIVIPTNILKLQGKKDRNEEHEKYTGATVLTANSGC 493
Query: 1126 YSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVK 1185
Y D V LDF SLYPS+MIAYN C++T + +N +PR EA ++
Sbjct: 494 YFDCVSGLDFASLYPSIMIAYNMCYTTLV-----LN----------ERELPR---EAKIE 535
Query: 1186 NSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGL 1245
I W FV+ + G+LP ++ K+ M ++ +K ++ +QL +
Sbjct: 536 T--IEWENNRHRFVQN--KEGLLPKILKKLWITRKSTKRLMNETENKEMKTILNGKQLAI 591
Query: 1246 KLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDT 1303
K+ N YG+ G +PCV +A SV KGR+ +E +V++ +AKVIYGD+
Sbjct: 592 KVSMNSVYGFCGV-MRGILPCVAIASSVTTKGRQMIEHTQNMVKQLYP-DAKVIYGDS 647
Score = 66.1 bits (154), Expect = 8e-09
Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 6/179 (3%)
Query: 1297 KVIYGDTDSMFVLVPGRSR--LEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKK 1354
++I +TDS++V P + + F+I + A+A++ P P+ L+ EKV P IL TKK
Sbjct: 873 EIIVKNTDSVYVNFPSTNNDMQKVFDISIEAAEAISKTFPQPIELEFEKVMYPFILFTKK 932
Query: 1355 RYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKAT 1414
RY ++ D + + KGI+ VRRD C + L L ++ +
Sbjct: 933 RYASLIWTRVD-KPDKIDFKGIQVVRRDNCSYVRESLTTIYNCLLYERNVDKCLGITDKI 991
Query: 1415 LSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWL 1473
+ L + +P+ +L ++ ++ Y+ + P +A+++ +D PR G RV ++
Sbjct: 992 IDDLLKGRVPIEKLTVSKSL--KSNYK-SKTMPHFLLAEKMKQRDPMNYPRPGERVPYV 1047
>UniRef50_Q8TWJ5 Cluster: DNA polymerase; n=1; Methanopyrus
kandleri|Rep: DNA polymerase - Methanopyrus kandleri
Length = 830
Score = 120 bits (288), Expect = 4e-25
Identities = 155/592 (26%), Positives = 248/592 (41%), Gaps = 53/592 (8%)
Query: 923 DPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYEGRIIGRV 982
DPD++ Y + Y+ RA LG+DV L+R K R Y I GR
Sbjct: 246 DPDVVFTYNGDEFDLPYLQHRAGKLGIDV-SPLARPAGK-RGIILKHGGGRYASDIFGRA 303
Query: 983 IFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWC--DESKMLRWIPVEYY 1040
+++ R L L ++ E + +VL A +++ W + +++R+ + +
Sbjct: 304 HVDLYHTARKNLKLERFTLEEAVKDVLGVEKEEMELADINEAWKRGNLDELMRYSAEDAH 363
Query: 1041 LTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALS 1100
T G +L++ S L RL L S G Q + +A + L+
Sbjct: 364 YTLELGLELAQVELEL----SYLTRL-PLPDATRFSFG-QLAEWRAIYKARQEDILVPNK 417
Query: 1101 PTIKQ-RSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQN 1159
PT + + R ++FEPE + + V+ +DF SLYP++M+A+N
Sbjct: 418 PTRDEYKRRRRKAYKGAIVFEPEIGLHEN-VVCVDFASLYPNVMVAHN------------ 464
Query: 1160 INGETAYEFGAWRLRIPRSKLEALVKNSLIHWSP-VGIGFVKTSVRRGVLPXXXXXXXXX 1218
I+ +T ++ PR +E + + +P VG F K R+G P
Sbjct: 465 ISPDT-FDCDC----CPRVTVEEVDDPTDATVAPDVGHKFCKR--RKGFFPRLVEGLIER 517
Query: 1219 XQAVKKSMKMQNDEA---VKKAMHSRQLGLKLIANVTYGYTA-ANFSGRMPCVEVADSVV 1274
+ +K+ ++ + E+ K + RQ K++AN YGY AN R C E A+SV
Sbjct: 518 RRELKRRLRKLDTESHPHEAKILDVRQQAYKVLANSYYGYMGWAN--ARWFCRECAESVT 575
Query: 1275 AKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNP 1334
A GR + ++ E + KV+YGDTDS+FV +P E E ++ V +
Sbjct: 576 AWGRYYISEVRRIAEEK--YGLKVVYGDTDSLFVKLPDADLEETIERVKEFLKEV--NGR 631
Query: 1335 PPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQS 1394
PV L+LE Y+ + TKK+Y G+ E KG+E VRRD P + R+
Sbjct: 632 LPVELELEDAYKRILFVTKKKYAGY------TEDGKIVTKGLEVVRRDWAPIARETQRRV 685
Query: 1395 LCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKR 1454
L + D + + L RL + + EL T + + P A R
Sbjct: 686 LKRILADNDPEAALKEIHEVLERLKSGDVDIDELAVTSQLTKKPS-EYVQKGPHVRAALR 744
Query: 1455 IGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYY 1506
+ + P G V +++ G PG V P EL R+ P V YY
Sbjct: 745 LA-RHLGVEPEPGTIVRYVIVRG-PG--SVSDKAYPVELVREEGKEPDVDYY 792
>UniRef50_UPI0000DB7455 Cluster: PREDICTED: similar to DNA polymerase
alpha catalytic subunit; n=1; Apis mellifera|Rep:
PREDICTED: similar to DNA polymerase alpha catalytic
subunit - Apis mellifera
Length = 1239
Score = 117 bits (282), Expect = 2e-24
Identities = 148/619 (23%), Positives = 254/619 (41%), Gaps = 73/619 (11%)
Query: 902 VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEK 961
V+ E + ++E++K++N DPD++ GY+ + ++ R L + L R+ +
Sbjct: 487 VMKFETETDLLEELLKIINSADPDLLIGYDCGFQ-FDILMHRMITLKVSNWSRLGRL--R 543
Query: 962 NRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQL 1021
++ + + + GR I ++ + LN +V +
Sbjct: 544 RSTPPLIRGKINLNQVLAGRPICDI----------------QVSAKELNLKVRKIKPGEC 587
Query: 1022 SDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQF 1081
+ ++ +K+ I + LT+ + ++ L+I+ ++ + G L+ G
Sbjct: 588 AAFYDTSNKIDNLIKIT--LTEALYILSIVFDLNILPLALQITSIAGNVISRTLTAGRAE 645
Query: 1082 RVESLMLRAARPLNLIALSPTIKQR--------STMRAPETLPLIFEPESRFYSDPVIVL 1133
R E L+L A N I I ++ + +A T L+ EP+ FY ++++
Sbjct: 646 RNEYLLLHAFHLKNYITPDKRIMKKGKDNEENTTRKKAAYTGGLVLEPKKGFYDKLILLM 705
Query: 1134 DFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSP 1193
DF SLYPS++ YN CF+T + G ++G L IP S LE+
Sbjct: 706 DFNSLYPSIIQEYNLCFTT-------VPGAAYADYG--NLSIPESNLES----------- 745
Query: 1194 VGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTY 1253
GV+P VKK MK +K + RQL LKL AN Y
Sbjct: 746 ------------GVIPTEIRKLVESRGEVKKLMKTTISPELKMQYNIRQLALKLTANSMY 793
Query: 1254 GYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGR 1313
G A R +A V AKGRE L+ LV + N +VIYGDTDS+ +
Sbjct: 794 GCLGATHC-RFYAKGLAAMVTAKGREILQHTKSLVEK---LNYEVIYGDTDSIMINTNLL 849
Query: 1314 SRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVG-FMFESPD-QEKPTY 1371
E F +G++I V V L ++ V++ +L KK+Y M + P+ Q + T
Sbjct: 850 DYEEVFSVGKKIKQEVN-KLYKRVELDIDGVFRYLLLLQKKKYAAVIMTKLPNGQIELTQ 908
Query: 1372 EAKGIETVRRD----GCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHE 1427
E KG++ VRRD C G K+L L + + ++ + E + +
Sbjct: 909 EHKGLDIVRRDWCQLACDTGKKILDHLLSNQPCEDRIEQIFMILHDVAQNVRENQISLSS 968
Query: 1428 LFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLA 1487
L T++ P ++A R+ K+ + +TG V +++ A
Sbjct: 969 LVITKQLSKNPNEYPDTKQAHVQVALRLN-KEGGRMWKTGDTVPYIICDDGTEKSATERA 1027
Query: 1488 RTPQELTRDRSLRPHVAYY 1506
E ++ L+ V YY
Sbjct: 1028 YHIDEYKKNDFLKIDVNYY 1046
>UniRef50_Q54SV8 Cluster: DNA polymerase; n=1; Dictyostelium
discoideum AX4|Rep: DNA polymerase - Dictyostelium
discoideum AX4
Length = 1509
Score = 117 bits (282), Expect = 2e-24
Identities = 147/578 (25%), Positives = 250/578 (43%), Gaps = 73/578 (12%)
Query: 923 DPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYEGRIIGRV 982
DPD+ G+ I GY +E + LD L+ L ++ E R ++ D I GR+
Sbjct: 698 DPDVFAGHNII----GYDIE----VILDRLEKL-KVMEWAFIGRLKRSSFDRFNHISGRL 748
Query: 983 IFNVWRLFRHELALS-SYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYL 1041
I + + + + L +YS L+ P +Y + ++ + +K L I +E
Sbjct: 749 ICDSYLVCKEFLPKEKNYSLVELSKNQLSINKPEINYLSIEPYF-ETTKKLN-IFIEINE 806
Query: 1042 TKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSP 1101
++ KL + T +L L G QW + L R+E L+L + L
Sbjct: 807 NDCYIIFLLIFKLLVFPLTKQLTNLAGNQWDKSLKSNRAERIEYLLLHNFHEKKYL-LPD 865
Query: 1102 TIKQRSTM------------RAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYC 1149
I Q+S+ A + L+ +P+ FY V++LDF SLYPS++ YN C
Sbjct: 866 KIYQKSSSSGGGGGAKDKDNHAAYSGGLVLDPKIDFYDRYVVLLDFNSLYPSIIQEYNVC 925
Query: 1150 FSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLP 1209
F+T I RV+ + G W +P +S+ +G+LP
Sbjct: 926 FTT-INRVKR-------DDGKWEEAMPPP----------------------SSIEKGILP 955
Query: 1210 XXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEV 1269
+ +KK M+ + ++ +K +Q +KLIAN YG + S R + +
Sbjct: 956 KVLHGLVSKRREIKKRMEQEKNKIIKAQYDIQQQAVKLIANSMYGCLGFSHS-RFYALPL 1014
Query: 1270 ADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAV 1329
A+ V KGRE L++ +V + VIYGDTDS+ + + EA IG++I +
Sbjct: 1015 AELVTRKGRENLQKGASIVNKMC---YDVIYGDTDSLMIYTGVGTFNEAETIGKEIQKKI 1071
Query: 1330 TADNPPPV-ALKLEKVYQPCILQTKKRYV---GFMFESPDQEKPTYEAKGIETVRRDGCP 1385
V + L+ +++ +L KK+Y F +S K E KGI+ VRRD C
Sbjct: 1072 NDQYRGSVMEIGLDGIFKRLLLFKKKKYACLKEFRIDS-TTTKCERENKGIDIVRRDYCD 1130
Query: 1386 AGVKLLRQSLCELFTHGD-----MSVVKRLVKATLSRLAETSLPVHELFFTREYHGQ-AG 1439
K + Q + L G+ S++K +++ ++ + +L V + T+ Q
Sbjct: 1131 L-TKDIGQWVLNLILGGEEKIALFSLIKEYLESVQQQIKDNTLAVEKFIITKTLSKQPEE 1189
Query: 1440 YRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCG 1477
Y P ++A ++ K P G +V +++T G
Sbjct: 1190 YNDADIQPHVQVALQMRAKGLHVQP--GEQVPYIITHG 1225
>UniRef50_Q6XM69 Cluster: DNA polymerase; n=2; Phaeovirus|Rep: DNA
polymerase - Feldmannia irregularis virus a
Length = 1013
Score = 115 bits (277), Expect = 1e-23
Identities = 130/553 (23%), Positives = 227/553 (41%), Gaps = 40/553 (7%)
Query: 899 NVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERA-------EILGLDV 951
+ PV+ V NE E + + L+ I+ GY ++ +RA + +
Sbjct: 245 DTPVLCVDNEYELLKKFRDLIIQRQICILVGYNSYQFDGQFLYKRAVNVYRFNDFCKIGF 304
Query: 952 LKDLS-RITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLN 1010
L++ + +T K + + + I GRV F+ R L SY ++
Sbjct: 305 LRNSACTLTSKVLESSALGKNELSQFVIPGRVEFDALMTVRRNHKLGSYKLDSVCKHFFG 364
Query: 1011 ERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQ 1070
SY + + +Y L T++++ L + E+++L +
Sbjct: 365 GEKDDVSYGYIIQACKSKDPEALGKIAKYCLQDSWLTLKLVSFLKDVYNGLEMSKLCVVP 424
Query: 1071 WWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPV 1130
+ SRG Q + SL+L ++ S ++Q+ + +I + DPV
Sbjct: 425 LRFIESRGQQIKCLSLILDRIHSEYVLNRSRALEQQDQQCKFQGATVISAKKGFHCDDPV 484
Query: 1131 IVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIH 1190
+ LDF SLYPS++ N C++T +++ + EF L I E ++ ++
Sbjct: 485 VCLDFASLYPSIIRWKNLCYTT------HVDSD---EF----LDIDGVDYEKFEVSAGVY 531
Query: 1191 WSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIAN 1250
+ F + R G+L + K+ MK + D + + ++S+QL K+ N
Sbjct: 532 ET-----FARRPGRPGILAMIEEDLGEARKLTKRRMKSETDPTLLQLLNSKQLAQKITMN 586
Query: 1251 VTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLV 1310
YG+ G +P V +A +V A GR ++R +R + VIYGDTDS+
Sbjct: 587 SLYGF-CGTVRGCLPLVAIAAAVTATGRFMIKRTADFIRNDM--KGVVIYGDTDSVMCTF 643
Query: 1311 P---------GRSRLE-AFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFM 1360
P ++ LE A+E G Q PV L+ EK+Y P +L +KKRY
Sbjct: 644 PVEQSVRDQGNKALLEHAYEKGLQAEQQSLELFGHPVKLEYEKMYFPFLLLSKKRYASMC 703
Query: 1361 FESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAE 1420
+E+PD P G+ TVRRD + + L V + V + L + +
Sbjct: 704 YETPD-TAPKITTSGLVTVRRDNAKIVRDCANEVIRILMERQGADNVVKYVDSVLRAMDD 762
Query: 1421 TSLPVHELFFTRE 1433
+L + L + E
Sbjct: 763 GTLDLEMLTISNE 775
>UniRef50_Q5B0J8 Cluster: DNA polymerase; n=28; Eukaryota|Rep: DNA
polymerase - Emericella nidulans (Aspergillus nidulans)
Length = 2019
Score = 109 bits (263), Expect = 5e-22
Identities = 108/404 (26%), Positives = 181/404 (44%), Gaps = 52/404 (12%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIP 1176
L+FEPE Y V+V+DF SLYPS++ YN CF+T + R + E + +P
Sbjct: 844 LVFEPERGLYDRYVLVMDFNSLYPSIIQEYNICFTT-VDRTSSAENENDEKVP----EVP 898
Query: 1177 RSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKK 1236
S E +G+LP + VKK MK + +
Sbjct: 899 ASDAE-----------------------QGILPRLIATLVGRRREVKKLMKDKRATPEQL 935
Query: 1237 AM-HSRQLGLKLIANVTY---GYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENT 1292
A+ ++QL KL AN Y GYT + F R +A KGRE L +LV
Sbjct: 936 ALWDTKQLAFKLTANSMYGCLGYTQSRFYAR----PLAMLTTFKGREILRSTKELVESK- 990
Query: 1293 TWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQT 1352
+VIYGDTDS+ + + +A ++G+++ AV + + + ++ V++ +L
Sbjct: 991 --QLRVIYGDTDSVMINTNMDTISDALKVGEELKTAVN-ERYKLLEIDIDNVFRRLLLHA 1047
Query: 1353 KKRYVGF-MFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLV 1411
KK+Y M E + E KG++ RR+ C + ++ L E+ + D +V V
Sbjct: 1048 KKKYAAINMTEVDGKYVDKLEVKGLDMKRREYCALSKEASQRLLNEILSGDDQELVLNRV 1107
Query: 1412 KATLSRLA----ETSLPVHE-LFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRT 1466
L LA E ++PV + + +T+ Y + PP ++A R + + P
Sbjct: 1108 HDYLRELAGNMREYTIPVQKYVIYTKLSKRPEEYPNKETMPPAQVALRELARGKTVRPND 1167
Query: 1467 GWRVSWLVTCG---APGVPLVRLARTPQELTR-DRSLRPHVAYY 1506
+S++VT G +P + + T Q++ + D L+P + +Y
Sbjct: 1168 --VISYIVTSGDSETSSLPPAKRSYTLQDVIKPDSRLKPDIEFY 1209
>UniRef50_Q8SRW2 Cluster: DNA polymerase; n=1; Encephalitozoon
cuniculi|Rep: DNA polymerase - Encephalitozoon cuniculi
Length = 956
Score = 108 bits (260), Expect = 1e-21
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 40/357 (11%)
Query: 1041 LTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALS 1100
+++ +++ Q + ++ + E++ + G L R+E +L +
Sbjct: 335 ISESEAILQIFQATEALDLSKEMSEVSGYILNRTLQNLRAERIEYTLLHELYARGFL-FP 393
Query: 1101 PTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNI 1160
PT+ +R + L+ P++ FY D V++LDF SLYPS++ +N CFST ++I
Sbjct: 394 PTVSRREVKYSGG---LVLPPQTGFYEDLVLLLDFNSLYPSIIQEFNVCFSTIGMFDRSI 450
Query: 1161 NGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQ 1220
+G + E ++ R +A KNS RG LP +
Sbjct: 451 SGNMSSE------QLVRLTEDA--KNS----------------ERGFLPRILEGFVRRRK 486
Query: 1221 AVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPC-VEVADSVVAKGRE 1279
AVK +K KA+ RQ LKL AN YG F G C +A + +KGR+
Sbjct: 487 AVKDLLKQGGTPEETKALDIRQKALKLTANSIYG--CLGFVGSRFCNYTMAAYITSKGRD 544
Query: 1280 TLERAIKLVRENTTWNAKVIYGDTDSMFV---LVPGRSR-LEAFEIGQQIADAVTADNPP 1335
L A K + E ++IYGDTDS+ V L +S +A E+ +++ DA+ +
Sbjct: 545 LLLEA-KRIAEGEC-GVRIIYGDTDSVMVHTGLAGKKSNYTKALELSRRLQDAINS-RYK 601
Query: 1336 PVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLR 1392
+ ++++KV++ +L KKRY G D K E KG++ VR+D C K+ R
Sbjct: 602 KIEIEVDKVFKKLLLYKKKRYAGLYM--TDDGKGRIEYKGLDLVRKDFCEVSRKICR 656
>UniRef50_Q27152 Cluster: DNA polymerase alpha catalytic subunit;
n=21; Spirotrichea|Rep: DNA polymerase alpha catalytic
subunit - Oxytricha trifallax (Sterkiella
histriomuscorum)
Length = 1513
Score = 108 bits (260), Expect = 1e-21
Identities = 80/274 (29%), Positives = 130/274 (47%), Gaps = 19/274 (6%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGR-VQNING-ETAYEFGAWRLR 1174
L+ EP++ FY + +++LDF SLYPS++ YN CF+T R +N +G E +F A
Sbjct: 873 LVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRRPTKNFDGSEVKSQFKA---- 928
Query: 1175 IPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAV 1234
+ +A N + + +V+ VLP +AVK+ MK + D
Sbjct: 929 ---AGTDANEGNEV---EEADLPDKNVNVKDAVLPNVLRDLVQKRKAVKEKMKNEKDAVK 982
Query: 1235 KKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTW 1294
+ RQ +KL AN YG S R +A + GR+TL R + +
Sbjct: 983 LSQLEIRQKAIKLTANSMYGCLGFG-SSRFHAQAIAALITKTGRDTLLRTKDIAENKLGF 1041
Query: 1295 NAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKK 1354
N V+YGDTDS+ + ++ E+G++ + ++++ V++ +L KK
Sbjct: 1042 N--VVYGDTDSIMINTGTNQLQQSLEMGKRPQGLKLIALYKCLEIEIDGVFKSLLLLKKK 1099
Query: 1355 RYVGFMFE---SPDQEKPTYEAKGIETVRRDGCP 1385
+Y +E +PD K E KG++ VRRD CP
Sbjct: 1100 KYAALKYEGFGTPD-AKVVQEVKGLDMVRRDWCP 1132
>UniRef50_P09252 Cluster: DNA polymerase; n=20; Herpesviridae|Rep: DNA
polymerase - Varicella-zoster virus (strain Dumas)
(HHV-3) (Human herpesvirus 3)
Length = 1194
Score = 107 bits (257), Expect = 3e-21
Identities = 96/326 (29%), Positives = 154/326 (47%), Gaps = 52/326 (15%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+F+P++ FY DPV+VLDF SLYPS++ A+N CF+T +N ET P
Sbjct: 666 VFDPDTGFYIDPVVVLDFASLYPSIIQAHNLCFTTL-----TLNFETVKRLN------PS 714
Query: 1178 SKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMK-MQNDEAVKK 1236
V + FV+++VR +L +A++ + +DEAV
Sbjct: 715 DYATFTVGGKRLF-------FVRSNVRESLLGVLLKDWLAMRKAIRARIPGSSSDEAV-- 765
Query: 1237 AMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETL--------------E 1282
+ +Q +K++ N YG+T G +PC+ VA +V GR+ L E
Sbjct: 766 LLDKQQAAIKVVCNSVYGFTGVA-QGFLPCLYVAATVTTIGRQMLLSTRDYIHNNWAAFE 824
Query: 1283 RAIKL-------VRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAV-TADNP 1334
R I V + KVIYGDTDS+F+ G S +IG+++A + TA
Sbjct: 825 RFITAFPDIESSVLSQKAYEVKVIYGDTDSVFIRFKGVSVEGIAKIGEKMAHIISTALFC 884
Query: 1335 PPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQS 1394
PP+ L+ EK + +L TKK+Y+G ++ KG++ VR++ C + +
Sbjct: 885 PPIKLECEKTFIKLLLITKKKYIGVIYGG------KVLMKGVDLVRKNNCQF-INDYARK 937
Query: 1395 LCELFTHGDMSVVKRLVKATLSRLAE 1420
L EL + D +V + +A+ +AE
Sbjct: 938 LVELLLYDD-TVSRAAAEASCVSIAE 962
Score = 50.8 bits (116), Expect = 3e-04
Identities = 59/283 (20%), Positives = 107/283 (37%), Gaps = 8/283 (2%)
Query: 850 HPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGIIVVDSSSRKYLDGCVFNVPVIYVSNEI 909
H + V I + YS+ H L SL + ++ D + V+ +E
Sbjct: 367 HLEDLVIQISCLLYSIPRQSLE-HILLFSLGSCDLPQRYVQEMKDAGLPEPTVLEFDSEF 425
Query: 910 ETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMK 969
E + + LV + P+ GY I W +++E+ + L I K W
Sbjct: 426 ELLIAFMTLVKQYAPEFATGYNIVNFDWAFIMEKLNSIYSLKLDGYGSINRGGLFKIWDV 485
Query: 970 NESDYEGR----IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWW 1025
+S ++ R I G + +++ + +L LSSY ++ E LNE Y + ++
Sbjct: 486 GKSGFQRRSKVKINGLISLDMYAIATEKLKLSSYKLDSVAREALNESKRDLPYKDIPGYY 545
Query: 1026 CDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVES 1085
R I EY + + ++ K S +ARL + + + G Q R+ +
Sbjct: 546 A-SGPNTRGIIGEYCIQDSALVGKLFFKYLPHLELSAVARLARITLTKAIYDGQQVRIYT 604
Query: 1086 LMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSD 1128
+L A I P +T + +P + + E D
Sbjct: 605 CLLGLASSRGFIL--PDGGYPATFEYKDVIPDVGDVEEEMDED 645
>UniRef50_O00874 Cluster: DNA polymerase alpha catalytic subunit;
n=32; Trypanosomatidae|Rep: DNA polymerase alpha
catalytic subunit - Leishmania donovani
Length = 1339
Score = 106 bits (255), Expect = 4e-21
Identities = 114/502 (22%), Positives = 211/502 (42%), Gaps = 45/502 (8%)
Query: 906 SNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKN--R 963
+NE +D + + + D D+M G+ + +L R + L + + R+ K R
Sbjct: 507 ANERALLDWLAQQLGKIDADMMIGHNFLGFTLDILLRRYQELSISSWSTIGRLDLKRLPR 566
Query: 964 QKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSY----- 1018
+ N + + IGR++ + + L R +Y + ++ + + S
Sbjct: 567 FQGTATNVNQEKETCIGRLVVDSYSLSREHYKTVNYRLLSLADQMQLQGITKGSNNFEPG 626
Query: 1019 -AQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSR 1077
+ L+ S+ + + ++ + T ++ LD+I T L + G W L
Sbjct: 627 TSVLTPAMLSASRDIYDVLLQVCNCAVLSTA-VVSHLDVIRLTKRLTTIAGNLWSRTLFG 685
Query: 1078 GSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLP-----------LIFEPESRFY 1126
R+E L+L L I ++ R E ++ +P+ Y
Sbjct: 686 ARSERIEYLLLHTFHDLKFITPDRYVQNFKRGRDDEEEEDGKRKAKYQGGMVLDPKCGLY 745
Query: 1127 SDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKN 1186
SD +++LDF SLYPS++ +N CF+T ++ E+ S+++
Sbjct: 746 SDYILLLDFNSLYPSLIQEFNICFTT-------VDRESG------------SEIDVPPPE 786
Query: 1187 SLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLK 1246
+LI S G + + VLP + VK+ MK++ D + RQ LK
Sbjct: 787 NLICASCAAAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKIEKDANNLALLEIRQKALK 846
Query: 1247 LIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSM 1306
L AN YG +S R +A+ V +GR L+ + L+ + + +VIYGDTDS+
Sbjct: 847 LTANSMYGCLGFEYS-RFHAQPLAELVTRQGRLALQSTVDLIPQLNP-SLRVIYGDTDSV 904
Query: 1307 FVLVPGRSRLEAF-EIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPD 1365
+ ++ ++A ++G + + + + ++ V++ +L KK+Y
Sbjct: 905 MIQTGIKNDIKAVRDLGLDLKAKIN-KRYQSLEIDIDGVFRAILLLKKKKYAALTVTDWQ 963
Query: 1366 QEKPTY--EAKGIETVRRDGCP 1385
E TY E KG++ VRRD CP
Sbjct: 964 GEGKTYKKEVKGLDMVRRDWCP 985
>UniRef50_Q5Y970 Cluster: DNA polymerase; n=24; Herpesviridae|Rep: DNA
polymerase - Fibropapilloma-associated turtle herpesvirus
Length = 1151
Score = 102 bits (245), Expect = 7e-20
Identities = 87/311 (27%), Positives = 141/311 (45%), Gaps = 47/311 (15%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+ EPE+ FY DPV V DF SLYPS++ A+N CF+T R + + L+
Sbjct: 626 VLEPETGFYVDPVTVFDFASLYPSIIQAHNLCFTTLTRRTETLK----------ELKAGE 675
Query: 1178 SKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKA 1237
E V+ ++ +VK VRR +L + ++ SMK + +
Sbjct: 676 DYEEFKVQGMSLY-------YVKPHVRRSLLGELLTDWLALRKKIRASMKTAPSDQ-RLL 727
Query: 1238 MHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLV--------- 1288
+ +QL +KL N YG+T +G +PC+EVA +V GR+ L +
Sbjct: 728 LDKQQLAIKLTCNSVYGFTGV-ATGFLPCLEVAATVTTVGRDMLLATRDFIHTRWGTDFE 786
Query: 1289 -------------RENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVT-ADNP 1334
R + + +VIYGDTDS+FVL G + G +A ++ A
Sbjct: 787 ALLVDAPELAAFRRPESLFGLRVIYGDTDSVFVLCTGVAAEGLALHGDALAAVISRALFS 846
Query: 1335 PPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQS 1394
P+ L+ EK + ++ TKK+Y+G + Q KG++ VR++ C + R
Sbjct: 847 APIKLECEKTFHKLLMITKKKYIGVI-----QGSNQMMMKGVDLVRKNNCRFVNRYSRDL 901
Query: 1395 LCELFTHGDMS 1405
+ LF + ++S
Sbjct: 902 VDCLFKNDEVS 912
Score = 52.8 bits (121), Expect = 8e-05
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 8/226 (3%)
Query: 902 VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEK 961
VI +E E + P+ + GY I +++ +A L L R+ E+
Sbjct: 379 VIECDSEYELLLAFFTFFKQFSPEYLSGYNILGFDLPFLVNKAAAYDLK-LDGYGRL-ER 436
Query: 962 NRQKRWM-----KNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSY 1016
Q R + + + + + RI G V +V+ L R +L+L +Y + EVL E
Sbjct: 437 GGQFRVIDLSENRFQKNIKVRINGTVTLDVYPLLRGKLSLPNYKLDTVCREVLGETKRDV 496
Query: 1017 SYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLS 1076
SY ++ + + R + +Y L + R+ +K SE+A+L L +++
Sbjct: 497 SYKEIPTLY-GQGPEGRGLLGDYCLQDSALVCRLFEKFAPHVEMSEVAKLAHLPMNRIMT 555
Query: 1077 RGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPE 1122
G Q RV + +L+AAR I ++ + P+ P + PE
Sbjct: 556 DGQQIRVFTCLLKAARKYGYILPDRRFGTKAQLTDPDRGPSLKGPE 601
>UniRef50_Q23AJ0 Cluster: DNA polymerase catalytic subunit; n=2;
cellular organisms|Rep: DNA polymerase catalytic subunit
- Tetrahymena thermophila SB210
Length = 1396
Score = 101 bits (243), Expect = 1e-19
Identities = 84/286 (29%), Positives = 132/286 (46%), Gaps = 24/286 (8%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+FEPE Y++ +++LDF SLYPS++ +N CF+TC+ + + A G + I
Sbjct: 799 VFEPEKGLYNEYIVLLDFNSLYPSIIQEFNVCFTTCVRDPIPLEMQMAPFLGNKKAAIQY 858
Query: 1178 SKLEALVKNSLIHWSPV---GIGFVKT-------SVRRGV--LPXXXXXXXXXXQAVKKS 1225
SK + +N + V+T V +G+ LP + VK
Sbjct: 859 SKNQNTKENKMQDEDEEDNENEQIVQTHDVLPTIEVIKGIAPLPSILQYLVEQRKVVKNQ 918
Query: 1226 MKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAI 1285
+K Q D V + + +Q KL+AN YG + S R + +A + AKGR L +
Sbjct: 919 IKGQKDPQVIETLDIKQKAFKLVANSMYGCLGFS-SSRFYAMPLASFITAKGRHILFDSK 977
Query: 1286 KLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVY 1345
K+V + VIYGDTDS+ + LEA + G I V + + L ++ V+
Sbjct: 978 KIVED---MGYSVIYGDTDSLMIKPGTNEFLEAVKTGLSIKIKVNS-KYKKLQLDIDGVF 1033
Query: 1346 QPCILQTKKRYVGFMFESPDQ-------EKPTYEAKGIETVRRDGC 1384
+ +L KK+Y + ++ EK E KGI+ VRRD C
Sbjct: 1034 KNMLLLKKKKYATLKVANWEEVKNTNAPEKLEKEIKGIDVVRRDWC 1079
>UniRef50_Q6UDK1 Cluster: DNA polymerase; n=7; Alphaherpesvirinae|Rep:
DNA polymerase - Psittacid herpesvirus 1
Length = 1081
Score = 101 bits (242), Expect = 2e-19
Identities = 128/528 (24%), Positives = 215/528 (40%), Gaps = 73/528 (13%)
Query: 899 NVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLER-AEILGLDVLKDLSR 957
+V V +E E + + + P+ + GY I WG++ + I G+ L
Sbjct: 381 HVKVCECGSEFELLLCFMTFLKQFSPEFVTGYNILGFDWGFMYNKMVNIYGMR----LDG 436
Query: 958 ITEKNRQKRWMKNESDYEGR-------IIGRVIFNVWRLFRHELALSSYSFENCMYEVLN 1010
+ N + + + GR I G V F+++ + ++ L SY + VL
Sbjct: 437 YGKANAWGTFKVQDMPHSGRGKFRNVKINGIVNFDMFSIIYQKIKLCSYKLNSVAETVLG 496
Query: 1011 ERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQ 1070
E+ SY L + + I Y L ++ KL S +A+L +
Sbjct: 497 EKKHDLSYKDLPRLFALGPEERGKIGA-YCLQDSRLATKLFFKLVPHMELSAVAQLACIT 555
Query: 1071 WWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPL------------- 1117
+ G Q RV + +L+ AR + ++ P R T A
Sbjct: 556 LTRAVFDGQQVRVFTCLLQRARKIGVVL--PEKSDRFTFSAHAAGDQDDGGRSVGYQGAK 613
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+ +P+ F+ +PV+V DF SLYPS++ + N C+ST N E G LR+
Sbjct: 614 VLDPDVGFHVNPVMVFDFASLYPSIIQSNNLCYSTM---THNPAAIAHLEEGTDYLRVE- 669
Query: 1178 SKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKA 1237
V+ + FV+ VRR +L +A++ + + E K
Sbjct: 670 ------VQGRVFF-------FVREHVRRSLLAELLTDWLNMRKALRAQIPLAATEDEKVL 716
Query: 1238 MHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVREN------ 1291
+ +Q+ +K+I N YG+T +G +PC+EVA +V A GR+ L + + + EN
Sbjct: 717 LDMQQIAIKVICNSVYGFTGV-MNGMLPCLEVAATVTAIGRDMLLKTKQYIEENWREYSN 775
Query: 1292 --------------TTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVT-ADNPPP 1336
++ VIYGDTDS+FV G G +A +T A P
Sbjct: 776 IRERFFPAMAHEGVPQYSVAVIYGDTDSVFVSFKGVPVACLVASGDAMAAEITNALFRRP 835
Query: 1337 VALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGC 1384
V L+ EKV+ ++ KK+Y+G + +G++ VR+ C
Sbjct: 836 VKLECEKVFTKLLMIAKKKYIGVIHTG------KMMMRGVDMVRKSNC 877
>UniRef50_A5KAH7 Cluster: DNA polymerase; n=1; Plasmodium vivax|Rep:
DNA polymerase - Plasmodium vivax
Length = 1707
Score = 101 bits (242), Expect = 2e-19
Identities = 98/363 (26%), Positives = 151/363 (41%), Gaps = 40/363 (11%)
Query: 1054 LDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPE 1113
L II +T +L +L G W L + R+E +L I +P +K+R E
Sbjct: 871 LQIIEKTRDLTKLSGYLWARSLLCYTSERIEYFLLHEYNRKKFI--TPVVKKRVKKIDSE 928
Query: 1114 TLP----------LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGE 1163
+ L+ EP +Y V+ LDF SLYPS++I YN CFST GR + N
Sbjct: 929 QVKNKAAAKYSGGLVLEPLCGYYDTFVLYLDFNSLYPSIIIEYNVCFSTLKGRGEAANLG 988
Query: 1164 TAYEFGAWRLRIPRSKL-EALVKNSLIHWSPVG--IGFVKTSV----------------R 1204
A G R + L EA + + +G + +
Sbjct: 989 EAANLGEAANRGEAANLGEAANLGEAANLGAISTELGDAEADAAVALSEAVEVDDFDRTK 1048
Query: 1205 RGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRM 1264
G+LP +KK + + ++ K+ + + L +KLI+N YG N + R
Sbjct: 1049 PGILPSILKNLVEKRAFIKKLIANEKNKEKKELLLIQSLSIKLISNSIYG-CLGNSNNRF 1107
Query: 1265 PCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFV-----LVPGRSRLEAF 1319
+A + KGR L+ V +N KVIYGDTDS+ + G + EAF
Sbjct: 1108 YAKHMAAFITLKGRNLLQHTKSRVERE--FNLKVIYGDTDSIMIDTGIKAQGGSNYKEAF 1165
Query: 1320 EIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETV 1379
+ I + + + L LE ++ +L KK+Y + E+ YE KGI +
Sbjct: 1166 RLAHVIKNTINKSYKR-LELDLECIFSKLLLLKKKKYACAKVVDANMERCEYEMKGINFI 1224
Query: 1380 RRD 1382
+RD
Sbjct: 1225 KRD 1227
>UniRef50_P09884 Cluster: DNA polymerase alpha catalytic subunit;
n=37; Eumetazoa|Rep: DNA polymerase alpha catalytic
subunit - Homo sapiens (Human)
Length = 1462
Score = 101 bits (242), Expect = 2e-19
Identities = 138/638 (21%), Positives = 251/638 (39%), Gaps = 62/638 (9%)
Query: 899 NVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRI 958
NV V + E + + V+ DPDI+ G+ I +L+R + + R+
Sbjct: 606 NVKVEVAATERTLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQRINVCKAPHWSKIGRL 665
Query: 959 TEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSY 1018
N K ++ GR+I +V + + SY + ++L
Sbjct: 666 KRSNMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQQILKTERVVIPM 725
Query: 1019 AQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRG 1078
+ + + + S++L + E+ ++++ +L+++ ++ + G L G
Sbjct: 726 ENIQNMYSESSQLLYLL--EHTWKDAKFILQIMCELNVLPLALQITNIAGNIMSRTLMGG 783
Query: 1079 SQFRVESLMLRAARPLNLIALSPTI---------------------KQRSTMRAPETLPL 1117
R E L+L A N I I ++ +A L
Sbjct: 784 RSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTNKYKKGRKKAAYAGGL 843
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+ +P+ FY +++LDF SLYPS++ +N CF+T VQ + E
Sbjct: 844 VLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTT----VQRVASEA------------- 886
Query: 1178 SKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQ--NDEAVK 1235
K+ + I P S+ G+LP + VK+ MK Q N + +
Sbjct: 887 QKVTEDGEQEQIPELP------DPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLIL 940
Query: 1236 KAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWN 1295
+ RQ LKL AN YG ++S R +A V KGRE L ++V++ N
Sbjct: 941 Q-YDIRQKALKLTANSMYGCLGFSYS-RFYAKPLAALVTYKGREILMHTKEMVQK---MN 995
Query: 1296 AKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKR 1355
+VIYGDTDS+ + + E F++G ++ V + + ++ V++ +L KK+
Sbjct: 996 LEVIYGDTDSIMINTNSTNLEEVFKLGNKVKSEVN-KLYKLLEIDIDGVFKSLLLLKKKK 1054
Query: 1356 YVGFMFE--SPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKA 1413
Y + E S E KG++ VRRD C + ++ + + ++
Sbjct: 1055 YAALVVEPTSDGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQK 1114
Query: 1414 TLSRLAET----SLPVHELFFTREY-HGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGW 1468
L + E S+PV + + Y S P +A I + R + + G
Sbjct: 1115 RLIEIGENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKV-KAGD 1173
Query: 1469 RVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYY 1506
VS+++ + + A P++L + +L YY
Sbjct: 1174 TVSYVICQDGSNLTASQRAYAPEQLQKQDNLTIDTQYY 1211
>UniRef50_Q85428 Cluster: DNA polymerase; n=10; Herpesviridae|Rep: DNA
polymerase - Rat cytomegalovirus (strain Maastricht)
Length = 1173
Score = 100 bits (240), Expect = 3e-19
Identities = 91/331 (27%), Positives = 154/331 (46%), Gaps = 49/331 (14%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+ PE ++ +P++V DF SLYPS++++ N C+ST + ++G +P
Sbjct: 634 VLAPECGYHHNPILVFDFASLYPSIIMSNNLCYSTLL-----VDGSPP---------VPD 679
Query: 1178 SKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKA 1237
+ +V + FV+ VRR +L + V+ +MK DE +
Sbjct: 680 EDVLEVVVGEATRYR-----FVREHVRRSLLAELLVRWLKQRKLVRDAMKACGDEKQRMF 734
Query: 1238 MHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETL-------ER------- 1283
M +QL LK+ N YG+T + +PC+ +A S+ GR+ L ER
Sbjct: 735 MDKQQLALKVTCNAFYGFTGVA-APMLPCLPIAASITKIGRDMLLATSAYMERHCNDVEF 793
Query: 1284 ---AIKLVRENTTWNA---KVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTAD-NPPP 1336
+ + RE +A K++YGDTDS+FV G R ++ ++A AVT D P
Sbjct: 794 LVSEVGVPREAVDRDALRVKIVYGDTDSVFVGFRGIGREVLVKVAGKLAAAVTRDLFRDP 853
Query: 1337 VALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLC 1396
V L+ EK++ ++ KKRY+G ++ + K KG++ VRR C A V+ + +
Sbjct: 854 VRLEFEKMFVSLMMICKKRYIGKVY---GENKLC--MKGVDLVRRHAC-AFVRSIVSEVV 907
Query: 1397 ELFTHGD--MSVVKRLVKATLSRLAETSLPV 1425
++ H + RL + + L +PV
Sbjct: 908 DVIFHDEAVSEGAMRLSEMSFEELRRQGVPV 938
>UniRef50_A2FME7 Cluster: DNA polymerase; n=1; Trichomonas vaginalis
G3|Rep: DNA polymerase - Trichomonas vaginalis G3
Length = 1378
Score = 100 bits (239), Expect = 4e-19
Identities = 93/353 (26%), Positives = 163/353 (46%), Gaps = 27/353 (7%)
Query: 1048 VRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRS 1107
+ + +K+ I+ T ++++L G W VL + R E+L+ A +N + P Q
Sbjct: 617 INLTRKIHIVPLTLQISQLSGALWSRVLLGKASPRSEALL--AHEFINRGYVIPDKSQVK 674
Query: 1108 TMRAPETLPL----IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGE 1163
E + +P+ F+ + V VLD+ SLYPS++ YN CF+T + N N
Sbjct: 675 VSGKREDAQYKGGHVLDPKRGFHENYVTVLDYNSLYPSIIRQYNICFTTRMVANPNQNSA 734
Query: 1164 TAYEFGAWRLRIPRSKLEALVKNSLIHWSPVG--IGFVKTSVRRGVLPXXXXXXXXXXQA 1221
+ A L RS+++ +K V I ++ ++ G +A
Sbjct: 735 VLPKIMAELLN-KRSEVKKDMKEKGDAQFQVTQQIEELENKIKAG---EDSVGNKNHLEA 790
Query: 1222 VKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETL 1281
+KK K+ N + ++++ +QL +K++AN YGY S R P ++A+ + KGRE L
Sbjct: 791 LKK--KLDNLDTELRSLNIKQLAVKILANSMYGYLGYKGS-RFPATKLAEEITKKGREAL 847
Query: 1282 ERAIKLVRE---NTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAV-------TA 1331
+ I +V + ++YGDTDS+ V R A + I AV
Sbjct: 848 QAVIDIVEHFQYEDSNQFSIVYGDTDSVMVDCMTRDETRARNVAMGICQAVELHFKKQRK 907
Query: 1332 DNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGC 1384
+ + L L+ +++ +L +KK+Y + + P+ E KG++ VRRD C
Sbjct: 908 NGDAVMKLGLDHLFKKMLLVSKKKYAA-LDQLPNGNL-NLELKGLDMVRRDWC 958
>UniRef50_A3QME0 Cluster: DNA polymerase; n=2; Euplotes|Rep: DNA
polymerase - Euplotes aediculatus
Length = 1404
Score = 99 bits (238), Expect = 5e-19
Identities = 128/623 (20%), Positives = 244/623 (39%), Gaps = 60/623 (9%)
Query: 906 SNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQK 965
+NE ++ I V++ DPD++ + + + +++R E +++ + R K
Sbjct: 543 TNEKAMLEAFITKVSLIDPDMIVAHGLCEGFFDTLIDRIEKNKVNMWSRIGRFKRTQVPK 602
Query: 966 RWMKNESDYEGR------IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYA 1019
K+ S G +GR+I + + R + ++Y ++ +
Sbjct: 603 LNRKDGSSIGGFWMPRQCTVGRLICDTFLSSRELIRETNYDLTELARTQFGKQREEFDSN 662
Query: 1020 QLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGS 1079
L +++ +++L + + TV++L KL I T +L + G W+ L
Sbjct: 663 LLPNFYKKSNELLN--AILHTEKDAFFTVQLLFKLSIXPLTKQLTNIAGNLWFRSLXNAX 720
Query: 1080 QFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLP-------------------LIFE 1120
R E L+L N I ++ E L+ +
Sbjct: 721 AERNEMLLLHEFNRKNFICPDKEYNKKPLKNQDEEKEEEDDDENYGKRKKAAYEGGLVLD 780
Query: 1121 PESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKL 1180
P+ Y V++LDF SLYPS++ YN CF+T + ++F I +K+
Sbjct: 781 PKPGLYDKIVLLLDFNSLYPSIIQEYNLCFTT-------VERCVTHDFDG--REISDAKI 831
Query: 1181 EALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHS 1240
+ V + + +LP + K MK++ D+ +
Sbjct: 832 DE-----------VDVPILGEQQESAILPSILKMLVKQEKISKDQMKVEKDKGKLDQLEI 880
Query: 1241 RQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIY 1300
+Q LKL AN YG + S R +A + KGR+ L+ + +N V+Y
Sbjct: 881 KQKALKLTANSMYGCLGFS-SSRFYAKAIAALITRKGRDALKATYDIANNILGYN--VVY 937
Query: 1301 GDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFM 1360
GDTDS+ V + +A IG +I V + ++L+ V++ +L KK+Y +
Sbjct: 938 GDTDSIMVSTGSNNLKDAILIGDEIKKEVN-KKYKHLEIELDGVFRSPLLLKKKKYAALV 996
Query: 1361 FESPDQEKP--TYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLS-- 1416
+E + E KG+ VRRD CP + L E+ + + ++A +
Sbjct: 997 YEDLNDPNSFRKKEVKGLXMVRRDWCPLSKAIGNYVLGEILSSKSQDXXQINLRAYFTDM 1056
Query: 1417 --RLAETSLPVHELFFTREY-HGQAGYRPGASAPPNEIAKR-IGMKDRRAIPRTGWRVSW 1472
+L + + + T++ + Y + P IA R I + + A T + +
Sbjct: 1057 XDKLKNNEIKMKDFIITKQLTRPPSEYNNPDTFPHVVIANRMIKEQSKSANELTSMYIPY 1116
Query: 1473 LVTCGAPGVPLVRLARTPQELTR 1495
++ C + A P+E+ +
Sbjct: 1117 II-CQGEAKQYAQRAYLPEEIQK 1138
>UniRef50_Q8I944 Cluster: DNA polymerase; n=3; Urostyla grandis|Rep:
DNA polymerase - Urostyla grandis
Length = 1356
Score = 99.1 bits (236), Expect = 9e-19
Identities = 72/271 (26%), Positives = 130/271 (47%), Gaps = 23/271 (8%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIP 1176
L+ EP++ FY +++LDF SLYPS++ YN CF+T +N + + ++
Sbjct: 831 LVIEPKAGFYDTIILLLDFNSLYPSIIQEYNLCFTT-------VNRRPSKNYDNSDIK-- 881
Query: 1177 RSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKK 1236
SK + + + V + + + +LP + VK+ +K + D ++
Sbjct: 882 -SKQDENIDDE------VELPDKGNTYKDAILPNVLKNLVQKRKIVKEQLKKETDPVKQQ 934
Query: 1237 AMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNA 1296
+ RQ +KL AN YG + S R +A + GRETL + + +N
Sbjct: 935 QLEIRQKAIKLTANSMYGCLGFS-SSRFHAKAIAALITKTGRETLLKTKDIAENKLGFN- 992
Query: 1297 KVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRY 1356
V+YGDTDS+ + + EA ++G ++ V + + ++++ +++ +L KK+Y
Sbjct: 993 -VVYGDTDSIMINSGTTNIEEALKMGHRLKQEVN-QHYKCLEIEIDGLFKSLLLLKKKKY 1050
Query: 1357 VGFM---FESPDQEKPTYEAKGIETVRRDGC 1384
F SPD++ E KG++ VRRD C
Sbjct: 1051 AALKVENFMSPDRKTIIKECKGLDMVRRDWC 1081
>UniRef50_Q9E6N9 Cluster: DNA polymerase; n=9; Herpesviridae|Rep: DNA
polymerase - Meleagrid herpesvirus 1 (MeHV-1) (Turkey
herpesvirus)
Length = 1220
Score = 98.3 bits (234), Expect = 2e-18
Identities = 83/288 (28%), Positives = 136/288 (47%), Gaps = 46/288 (15%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+ +P S F+ DPV+V DF SLYPS++ A+N CF+T + N++ LR
Sbjct: 682 VLDPISGFHVDPVMVFDFASLYPSIIQAHNLCFTTLVHDDTNLS----------NLRPQD 731
Query: 1178 SKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKA 1237
LE V+ L+ FVK +R +L +A++ + DE +
Sbjct: 732 DYLEINVQGKLLR-------FVKPHIRESLLAILLKDWLAMRKAIRAKIPESCDE-IAVL 783
Query: 1238 MHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRE---TLERAI--------K 1286
+ +Q +K++ N YG+ + +G +PC++VA +V GR T+ I
Sbjct: 784 LDKQQAAIKVVCNSVYGFCGVS-NGLLPCIDVAATVTTIGRNMLLTVRDYIHKQWGTRDA 842
Query: 1287 LVRE--NTT-------WNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTAD-NPPP 1336
L+RE N + ++ VIYGDTDS+F+ G G +A V++D P P
Sbjct: 843 LLREFPNLSNFMRPEDYSVSVIYGDTDSVFIKFKGVDIHGLVTTGDDMAKRVSSDLFPKP 902
Query: 1337 VALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGC 1384
+ L+ EK + +L TKK+Y+G + KG++ VR++ C
Sbjct: 903 IKLECEKTFNKLLLITKKKYMGTIHGG------RMLMKGVDIVRKNNC 944
Score = 45.2 bits (102), Expect = 0.015
Identities = 40/195 (20%), Positives = 79/195 (40%), Gaps = 5/195 (2%)
Query: 902 VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEK 961
V+ +E E + + + + P+ + GY I W +++ + + L + +K
Sbjct: 427 VLEFDSEFELLLAFMTFIKQYAPEFVTGYNIVNFDWAFIVTKLTTVYNMRLDGYGVVNQK 486
Query: 962 NRQKRWMKNESDYEGR----IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYS 1017
K W + ++ + G + +++ + +L L SY + L ER S
Sbjct: 487 GMFKVWDAGTNRFQKKGKFKATGMITLDMYSIATEKLKLQSYKLDVVAEAALGERKKELS 546
Query: 1018 YAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSR 1077
Y ++ + + R I EY L ++ K S +A+L G+ + +
Sbjct: 547 YKEIPSHFAAGPEK-RGIIGEYCLQDSLLVGKLFFKYIPHLELSAIAKLAGILLSKAIFD 605
Query: 1078 GSQFRVESLMLRAAR 1092
G Q RV + +LR AR
Sbjct: 606 GQQIRVYTCLLRLAR 620
>UniRef50_Q918Y3 Cluster: DNA polymerase; n=6; unknown
phycodnavirus|Rep: DNA polymerase - unknown phycodnavirus
Length = 239
Score = 97.9 bits (233), Expect = 2e-18
Identities = 78/239 (32%), Positives = 115/239 (48%), Gaps = 22/239 (9%)
Query: 1126 YSDPVIVLDFQSLYPSMMIAYNYCFSTCI--GRVQNINGETAYEFGAWRLRIPRSKLEAL 1183
Y +P+ LDF SLYPS+M+A+N CFST + R +N+ G E+ + + P K
Sbjct: 13 YYEPITALDFASLYPSIMMAHNLCFSTLVLSPRFENVPG---IEYETFTITKPDPKDP-- 67
Query: 1184 VKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQL 1243
+N + V F + +LP + KK M +++ + +QL
Sbjct: 68 -ENKI----KVNYKFAQNVP--SLLPEILKELKEFRKKAKKLMAKHKGTQLEEIYNGQQL 120
Query: 1244 GLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDT 1303
K+ N YG+ A G +PCV +A + ++GR + + V EN A V YGDT
Sbjct: 121 AYKISMNSIYGFCGAKH-GILPCVPIAATTTSQGRNMIAMTKECV-ENNFPGAVVRYGDT 178
Query: 1304 DSMFVLVP--GRSRLEA----FEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRY 1356
DS+ V G EA +E+G++ A+ P L+LEKVY P IL TKKRY
Sbjct: 179 DSVMVQFDCKGMGTQEAIEKSWELGEKAAEMCNKLFKKPNDLELEKVYCPFILYTKKRY 237
>UniRef50_Q66230 Cluster: DNA polymerase; n=3; Prymnesiovirus|Rep: DNA
polymerase - Chrysochromulina brevifilum virus PW3
Length = 240
Score = 97.5 bits (232), Expect = 3e-18
Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 21/237 (8%)
Query: 1128 DPVIVLDFQSLYPSMMIAYNYCFSTCIG--RVQNINGETAYEFGAWRLRIPRSKLEALVK 1185
+P+ LDF SLY +MIA+NY ++T + N+ G ++ W S + +
Sbjct: 15 EPIAGLDFASLYARIMIAHNYDYATIVEDPEFDNLPGIEYFDMD-WEEEDIESDGNEIKR 73
Query: 1186 NSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMK-MQNDEAVKKAMHSRQLG 1244
V + FV+ R G++P +A++K MK + D+ + + QL
Sbjct: 74 -------AVSVRFVQN--RTGIMPKILDRLWKERKAIRKQMKTLSPDDPLYAVYNGLQLA 124
Query: 1245 LKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTD 1304
+K+ N YG+T A + GR+P ++A +V A G + + K E + +V+YGDTD
Sbjct: 125 IKVSMNSIYGFTGARY-GRLPIKKIAAAVTACGSGMIAHSKKCAEE--WYECEVVYGDTD 181
Query: 1305 SMFVL----VPGRSRLE-AFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRY 1356
S++V + G + F++ + AD ++A P+ L+ EKV P IL +KKRY
Sbjct: 182 SIYVKFKSDLKGPDHMNYVFKVAPECADRISATFKKPIDLEFEKVMYPFILYSKKRY 238
>UniRef50_UPI00015B62CE Cluster: PREDICTED: similar to DNA polymerase
alpha catalytic subunit; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to DNA polymerase alpha catalytic
subunit - Nasonia vitripennis
Length = 1120
Score = 96.3 bits (229), Expect = 6e-18
Identities = 72/270 (26%), Positives = 128/270 (47%), Gaps = 12/270 (4%)
Query: 1199 VKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQN-DEAVKKAMHSRQLGLKLIANVTYGYTA 1257
V++ +G+LP +KK + N +++ +SRQL LKL AN YG
Sbjct: 573 VESCAEQGILPTIISGLVQSRLQIKKMINSPNLSSDLRRQYNSRQLALKLTANSMYGCLG 632
Query: 1258 ANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLE 1317
A++S R +A V +GRE ++ L++ + N +VIYGDTDS + V +
Sbjct: 633 ASYS-RFYAKGLAALVAMRGREIFKKTQDLIQSH---NYEVIYGDTDSFMINVKLTDYEQ 688
Query: 1318 AFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMF--ESPDQEKPTYEAKG 1375
+G+ + V + + +++V++ +L KK+Y G + +S D+ + E KG
Sbjct: 689 VMAVGRMLKKEVN-KLFKKIKIDIDRVFKCLLLMKKKQYAGLIITRQSNDELEYKKEIKG 747
Query: 1376 IETVRRDGC----PAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFT 1431
+E +RRD C G K+L + L + +H + +++ T L E LP+ L T
Sbjct: 748 LEIIRRDCCALASDTGHKVLEELLKDQPSHIRSKNIFEILETTNRELREGKLPMSSLEIT 807
Query: 1432 REYHGQAGYRPGASAPPNEIAKRIGMKDRR 1461
++ P + P +A+R+ + R
Sbjct: 808 KKLSKDPDKYPNKNHPHVIVAERLNKINAR 837
Score = 74.1 bits (174), Expect = 3e-11
Identities = 66/262 (25%), Positives = 128/262 (48%), Gaps = 14/262 (5%)
Query: 902 VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEK 961
VI +EI ++ +++L+ DPDI+ GY+ + ++ + LG D SRI +
Sbjct: 306 VILCESEINLLERLLQLLQSLDPDILIGYDTNFE-FDILVRKIMSLGTT---DWSRIGKL 361
Query: 962 NRQKRWMKNESDYEGRII-GRVIFNVWR-LFRHELALSSYSFENCMYEVLNERVPSYSYA 1019
R Y +++ GR I +V R + + ++++Y + L++ +Y+
Sbjct: 362 RRSVPPKFKGRIYLNQVLCGRPICDVQRSMSDFQFSVTNYDLASLYSSTLSKDAGAYTEI 421
Query: 1020 QLSDWWCDESKMLRW-IPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRG 1078
+ + + + + V+ +TK+S + +L I++ ++ R+ G LS G
Sbjct: 422 KPDECLQYYTSLYNMTLLVKSTMTKVSYIFEVSAELSILSLAVQITRIVGNTLSRTLSCG 481
Query: 1079 SQFRVESLMLRAARPLNLIALSPTIKQRST-----MRAPETLPLIFEPESRFYSDPVIVL 1133
R E L+L A + N L+P ++ ++ ++ T +I EP++ FY V++L
Sbjct: 482 VGERNEFLLLHAFQSKNY--LTPDKRKDNSDYDGKKKSSYTGGMILEPKAGFYDTSVLLL 539
Query: 1134 DFQSLYPSMMIAYNYCFSTCIG 1155
DF SLYPS++ +N CF+T G
Sbjct: 540 DFNSLYPSIIQEFNICFTTIPG 561
>UniRef50_Q782R4 Cluster: DNA polymerase; n=2; Gallid herpesvirus
3|Rep: DNA polymerase - Gallid herpesvirus 3 (Marek's
disease virus type 2)
Length = 1190
Score = 95.9 bits (228), Expect = 8e-18
Identities = 78/288 (27%), Positives = 134/288 (46%), Gaps = 46/288 (15%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+ +P S F+ DPV+V DF SLYPS++ A+N CF+T I + + LR
Sbjct: 654 VLDPISGFHVDPVVVFDFASLYPSIIQAHNLCFTTLINDDRKLAD----------LRPRD 703
Query: 1178 SKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKA 1237
+E V+ +H F K +R +L +A++ + +D+
Sbjct: 704 DYMEIDVQGKSLH-------FAKPHIRESLLGILLKDWLAMRKAIRAKIPASSDDTAV-L 755
Query: 1238 MHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRE---TLERAIK-------- 1286
+ +Q +K++ N YG+ +G +PC++VA +V GR+ T+ +K
Sbjct: 756 LDKQQAAIKVVCNSVYGFCGVA-NGLLPCIDVAATVTTIGRDMLLTVRDYVKVKWGTRDA 814
Query: 1287 LVRE---------NTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADN-PPP 1336
L+RE ++ VIYGDTDS+F+ G + G +A +++D P P
Sbjct: 815 LLREFPALTNYMLGDDYSVSVIYGDTDSVFIKFKGVAIQGLVANGDDMAKRISSDLFPKP 874
Query: 1337 VALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGC 1384
+ L+ EK + +L TKK+Y+G + KG++ VR++ C
Sbjct: 875 IKLECEKTFDKLLLITKKKYMGTIHGG------RMLMKGVDIVRKNNC 916
>UniRef50_P07918 Cluster: DNA polymerase; n=128; Viruses|Rep: DNA
polymerase - Human herpesvirus 2 (strain 186) (HHV-2)
(Human herpes simplex virus2)
Length = 1240
Score = 94.7 bits (225), Expect = 2e-17
Identities = 86/308 (27%), Positives = 138/308 (44%), Gaps = 49/308 (15%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+ +P S F+ DPV+V DF SLYPS++ A+N CFST R + + L R
Sbjct: 706 VLDPTSGFHVDPVVVFDFASLYPSIIQAHNLCFSTLSLRPEAVA----------HLEADR 755
Query: 1178 SKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQN-DEAVKK 1236
LE V + FVK VR +L + ++ + +EAV
Sbjct: 756 DYLEIEVGGRRLF-------FVKAHVRESLLSILLRDWLAMRKQIRSRIPQSPPEEAV-- 806
Query: 1237 AMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLV-------- 1288
+ +Q +K++ N YG+T G +PC+ VA +V GRE L V
Sbjct: 807 LLDKQQAAIKVVCNSVYGFTGVQH-GLLPCLHVAATVTTIGREMLLATRAYVHARWAEFD 865
Query: 1289 ------------RENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVT-ADNPP 1335
R ++ ++IYGDTDS+FVL G + +G ++A ++ A P
Sbjct: 866 QLLADFPEAAGMRAPGPYSMRIIYGDTDSIFVLCRGLTGEALVAMGDKMASHISRALFLP 925
Query: 1336 PVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSL 1395
P+ L+ EK + +L KK+Y+G + KG++ VR++ C A + ++L
Sbjct: 926 PIKLECEKTFTKLLLIAKKKYIGVICGG------KMLIKGVDLVRKNNC-AFINRTSRAL 978
Query: 1396 CELFTHGD 1403
+L + D
Sbjct: 979 VDLLFYDD 986
Score = 44.8 bits (101), Expect = 0.020
Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 5/194 (2%)
Query: 902 VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEK 961
V+ +E E + + V + P+ + GY I W +VL + + L R+ +
Sbjct: 438 VLEFDSEFEMLLAFMTFVKQYGPEFVTGYNIINFDWPFVLTKLTEIYKVPLDGYGRMNGR 497
Query: 962 NRQKRWMKNESDYEGR----IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYS 1017
+ W +S ++ R + G V +++ + ++ LSSY VL ++ S
Sbjct: 498 GVFRVWDIGQSHFQKRSKIKVNGMVNIDMYGIITDKVKLSSYKLNAVAEAVLKDKKKDLS 557
Query: 1018 YAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSR 1077
Y + ++ R + EY + ++ K S +ARL G+ +
Sbjct: 558 YRDIPAYYA-SGPAQRGVIGEYCVQDSLLVGQLFFKFLPHLELSAVARLAGINITRTIYD 616
Query: 1078 GSQFRVESLMLRAA 1091
G Q RV + +LR A
Sbjct: 617 GQQIRVFTCLLRLA 630
>UniRef50_Q4Y991 Cluster: DNA polymerase; n=9; Plasmodium
(Vinckeia)|Rep: DNA polymerase - Plasmodium chabaudi
Length = 1674
Score = 93.9 bits (223), Expect = 3e-17
Identities = 97/367 (26%), Positives = 158/367 (43%), Gaps = 31/367 (8%)
Query: 1054 LDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRS------ 1107
L +I ++ +L +L G W L + VE +L I K++
Sbjct: 827 LQLIEKSRDLTKLSGYIWARSLLSYTSECVEYFLLHEYHKKKFITPIVVKKKQKIENDTN 886
Query: 1108 -TMRAPETLP-LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETA 1165
+ A + L L+ EP +Y V+ LDF SLYPS++I YN CFST ++N +
Sbjct: 887 KSKNAAKYLGGLVLEPLCGYYDTYVLYLDFNSLYPSIIIEYNICFSTF--NMKNYLASSD 944
Query: 1166 YEFGAWRLRIPRSKL----EALVKNSLIHWSPVG----IGFVKTSVRRGVLPXXXXXXXX 1217
+ I + + E+ V PVG I + + + G+LP
Sbjct: 945 STSKELQEEIEKKNIINYDESDVNQLDNKEEPVGDLSNIDYFDKT-KPGILPSILKQLVE 1003
Query: 1218 XXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKG 1277
+KK + + ++ K+ + + L +KLI+N YG N R +A + KG
Sbjct: 1004 KRAFIKKLIASEKNKEKKELLLVQSLSIKLISNSIYG-CLGNTHNRFYAKYIASYITQKG 1062
Query: 1278 RETLERA-IKLVRENTTWNAKVIYGDTDSMFVLVPGRSR-----LEAFEIGQQIADAVTA 1331
R L+ K+ +E +N VIYGDTDS+ + +S E+ ++ I + +
Sbjct: 1063 RNLLQHTKFKVEKE---FNLTVIYGDTDSIMIDTGIKSSDINNYKESLKLAHTIKNNINK 1119
Query: 1332 DNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLL 1391
N + L LE ++ +L KK+Y P+ K YE KGI ++RD C KL+
Sbjct: 1120 -NYKKLELDLECIFSKLLLLKKKKYACAKVIDPNLGKYEYEMKGINFIKRDFCKIS-KLI 1177
Query: 1392 RQSLCEL 1398
L +
Sbjct: 1178 GNELLRI 1184
>UniRef50_A3QME1 Cluster: DNA polymerase; n=1; Eschaneustyla sp.
WJC-2005|Rep: DNA polymerase - Eschaneustyla sp. WJC-2005
Length = 1548
Score = 93.9 bits (223), Expect = 3e-17
Identities = 86/354 (24%), Positives = 154/354 (43%), Gaps = 37/354 (10%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIP 1176
L+ EP++ FY + +++LDF SLYPS++ YN CF+T +N + F + I
Sbjct: 908 LVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTT-------VNRKPTKNFDGSEIEID 960
Query: 1177 RSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKK 1236
+E P G + +LP + VK+ MK + D +
Sbjct: 961 ED-VEV----------PSG-----KQNQEAILPKILKDLVLRRRQVKELMKKEKDSVKLQ 1004
Query: 1237 AMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNA 1296
+ RQ +KL AN YG + S R +A + KG +TL R + +N
Sbjct: 1005 QLEIRQKAIKLTANSMYGCLGFS-SSRFHAKSIAALITRKGGDTLLRTKDIAESKLQFN- 1062
Query: 1297 KVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRY 1356
V+YGDTDS+ + +A G+++ V + ++++ V++ +L KK+Y
Sbjct: 1063 -VVYGDTDSIMINTGTNQLNDALNTGRKLKAEVNT-LYKCLEIEIDGVFKCLLLLKKKKY 1120
Query: 1357 V-----GFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLV 1411
F+ + ++ K E KG++ VRR+ C K+ L ++ + V +
Sbjct: 1121 AALKVENFLSPNENERKTICEMKGLDMVRREWCALSKKVSGFVLDQILSGKQREDVVLQL 1180
Query: 1412 KATLS----RLAETSLPVHELFFTREYH-GQAGYRPGASAPPNEIAKRIGMKDR 1460
LS ++ E+S + E T++ + Y+ P +AKR+ + +
Sbjct: 1181 NEYLSEVGRKMKESSYNLGEFIITKQLNRALKDYQNSKGLPHVAVAKRLAAQGK 1234
>UniRef50_Q6X242 Cluster: DNA polymerase; n=119; Herpesviridae|Rep:
DNA polymerase - Bovine herpesvirus 5
Length = 1250
Score = 93.5 bits (222), Expect = 4e-17
Identities = 85/310 (27%), Positives = 136/310 (43%), Gaps = 51/310 (16%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+ EPES F+ DPV+VLDF SLYPS++ A+N CF+T + GE P
Sbjct: 732 VLEPESGFHVDPVMVLDFASLYPSIIQAHNLCFTTL------VRGEA-----------PP 774
Query: 1178 SKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSM-KMQNDEAVKK 1236
+ L + + FV+ VR +L +A++ + +EAV
Sbjct: 775 AGLAPGADYATFDVGGRALHFVRAHVRESLLSVLLRDWLAMRKAIRARIPAAAPEEAV-- 832
Query: 1237 AMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETL--------------- 1281
+ +Q +K++ N YG+T +G +PC+ VA +V GR+ L
Sbjct: 833 LLDKQQAAIKVVCNSVYGFTGV-ANGLLPCLAVAATVTTIGRDMLLETRRYIHDRWAAPE 891
Query: 1282 -------ERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTAD-N 1333
E A + +V+YGDTDS+FV G +G +A V+A
Sbjct: 892 ALARDFPEAAEAAAAAGARYRVRVVYGDTDSVFVKFAGMPYDAVCALGDGMARQVSAALF 951
Query: 1334 PPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQ 1393
PP+ L+ EK + +L TKK+Y+G + KG++ VR++ C + +
Sbjct: 952 RPPIKLECEKTFAKLLLITKKKYLGLVAGG------KMLMKGVDLVRKNNC-RFINAYAR 1004
Query: 1394 SLCELFTHGD 1403
L ++ H D
Sbjct: 1005 RLVDVLMHDD 1014
Score = 41.1 bits (92), Expect = 0.25
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 13/199 (6%)
Query: 902 VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLER------AEILGLDVLK-- 953
V+ +E E + + + + P+ + GY I W Y+LE+ A + G L
Sbjct: 460 VLEFDSEFELLLAFMTFLKQYSPEFVTGYNIVNFDWAYLLEKLTAVYDARLDGYGKLNRG 519
Query: 954 DLSRITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERV 1013
+ R+++ Q R+ K + +I G V +++R +L L SY E L ER
Sbjct: 520 GVFRVSDAG-QNRFQKQS---KVKINGVVSLDMYRTAVDKLKLPSYKLNAVAEEALRERK 575
Query: 1014 PSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWE 1073
Y + + + R + EY + + ++ K S +ARL G+
Sbjct: 576 VDLDYKDIPRHFAAGPEG-RGVIGEYCIQDSALVGKLFFKYLPHLELSAVARLAGITVPR 634
Query: 1074 VLSRGSQFRVESLMLRAAR 1092
+ G Q RV + +LR AR
Sbjct: 635 AIFDGQQIRVFTCLLRLAR 653
>UniRef50_P27172 Cluster: DNA polymerase; n=23; Herpesviridae|Rep: DNA
polymerase - Murine cytomegalovirus (strain Smith)
Length = 1097
Score = 93.5 bits (222), Expect = 4e-17
Identities = 84/329 (25%), Positives = 140/329 (42%), Gaps = 48/329 (14%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+ EPE F+ PV V DF SLYPS++++ N C+ST + + G +P
Sbjct: 608 VLEPECGFHHVPVCVFDFASLYPSIIMSNNLCYSTLL-----VEGSP---------EVPE 653
Query: 1178 SKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKA 1237
+ + H FV+ +V R +L + V+++MK +E +
Sbjct: 654 KDVLRVEIGDQCH------RFVRENVHRSLLAELLVRWLTQRKLVREAMKQCTNEMQRMI 707
Query: 1238 MHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVREN------ 1291
M +QL LK+ N YG+T +G +PC+ +A S+ GR+ L + +
Sbjct: 708 MDKQQLALKVTCNAFYGFTGV-AAGMLPCLPIAASITKIGRDMLLATAGHIEDRCNRPDF 766
Query: 1292 --------------TTWNAKVIYGDTDSMFVLVPGRSRLEAFE-IGQQIADAVTADNPPP 1336
K+IYGDTDS+F G + + +G A+ A P
Sbjct: 767 LRTVLGLPPEAIDPEALRVKIIYGDTDSVFAAFYGIDKEALLKAVGALAANVTNALFKEP 826
Query: 1337 VALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLC 1396
V L+ EK++ ++ KKRY+G + S + KG++ VRR C ++ L
Sbjct: 827 VRLEFEKMFVSLMMICKKRYIGKVHGSQN-----LSMKGVDLVRRTACGFVKAVVSDVLH 881
Query: 1397 ELFTHGDMSV-VKRLVKATLSRLAETSLP 1424
+F +S +L + T L + +P
Sbjct: 882 MVFNDETVSEGTMKLSRMTFDDLKKNGIP 910
>UniRef50_P08546 Cluster: DNA polymerase; n=126; Herpesviridae|Rep:
DNA polymerase - Human cytomegalovirus (strain AD169)
(HHV-5) (Human herpesvirus 5)
Length = 1242
Score = 93.5 bits (222), Expect = 4e-17
Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+FEPE +Y+DPV V DF SLYPS+++A+N C+ST + GE + P
Sbjct: 701 VFEPEVGYYNDPVAVFDFASLYPSIIMAHNLCYSTLLVP----GGEYPVD--------PA 748
Query: 1178 SKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKA 1237
++N + H FV+ SVR VL +AV++ M+ D +
Sbjct: 749 DVYSVTLENGVTH------RFVRASVRVSVLSELLNKWVSQRRAVRECMRECQDPVRRML 802
Query: 1238 MHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVREN 1291
+ Q+ LK+ N YG+T +G MPC+ +A S+ GR+ LER + +++N
Sbjct: 803 LDKEQMALKVTCNAFYGFTGV-VNGMMPCLPIAASITRIGRDMLERTARFIKDN 855
Score = 55.2 bits (127), Expect = 1e-05
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 1296 AKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTAD-NPPPVALKLEKVYQPCILQTKK 1354
A+VIYGDTDS+FV G + G +A VTA PV L+ EKV+ ++ KK
Sbjct: 904 ARVIYGDTDSVFVRFRGLTPQALVARGPSLAHYVTACLFVEPVKLEFEKVFVSLMMICKK 963
Query: 1355 RYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMS-VVKRLVKA 1413
RY+G + + KG++ VR+ C + R L LF ++S RL +
Sbjct: 964 RYIGKV-----EGASGLSMKGVDLVRKTACEFVKGVTRDVLSLLFEDREVSEAAVRLSRL 1018
Query: 1414 TLSRLAETSLP 1424
+L + + +P
Sbjct: 1019 SLDEVKKYGVP 1029
>UniRef50_Q9Y1T1 Cluster: DNA polymerase; n=1; Toxoplasma gondii|Rep:
DNA polymerase - Toxoplasma gondii
Length = 1690
Score = 92.7 bits (220), Expect = 8e-17
Identities = 84/280 (30%), Positives = 125/280 (44%), Gaps = 29/280 (10%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTC-------IGRVQNINGETAYEFG 1169
L+ EP Y V++LDF SLYPS++ YN CFST I RVQ NG
Sbjct: 1111 LVLEPRVGLYDTFVLLLDFNSLYPSIIQEYNVCFSTVKRPVRTRISRVQATNGPDGEIAD 1170
Query: 1170 AWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQ 1229
A+R R+ A ++ G T G+LP +AVK SMK +
Sbjct: 1171 AFREPDDRNLPHAAEEDVQ--------GIASTP---GLLPRILRQLVQRRRAVKASMKGE 1219
Query: 1230 NDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVR 1289
++ + +QL LKL AN YG S R E+A + +GR L A V
Sbjct: 1220 SNPVKRATQEIKQLALKLTANSIYGCLGFXRS-RFYAKEIAAFITQQGRNILMAAKDKVE 1278
Query: 1290 ENTTWNAKVIYGDTDSMFVLV-------PGRSRLEAFEIGQQIADAVTADNPPPVALKLE 1342
+V+YGDTDS+ + G++ A +G+Q+ + + + + LE
Sbjct: 1279 R--ILRLEVVYGDTDSIMINTGLHDDGGEGKTYAAAVRLGEQVKAEIN-KSYKKLEIDLE 1335
Query: 1343 KVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRD 1382
V++ +L KK+YV + + + E KG++ VRRD
Sbjct: 1336 GVFRRLLLLKKKKYVCCIVVDYAKRQYKLEQKGLDIVRRD 1375
>UniRef50_A7KAW4 Cluster: DNA polymerase; n=1; Apodemus flavicollis
cytomegalovirus 3|Rep: DNA polymerase - Apodemus
flavicollis cytomegalovirus 3
Length = 712
Score = 92.3 bits (219), Expect = 1e-16
Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 30/367 (8%)
Query: 924 PDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESD--------YE 975
P+I+ GY I Y++ R E++ L SR+ + R ++ + +
Sbjct: 332 PEIITGYNILGFDLRYLITRMEVIHNVRLNTFSRLKQGGRFLVYIPKTVERKTFQTVVQK 391
Query: 976 GRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWI 1035
I G V +++ + + + +Y + L+ER SY ++ + + + R +
Sbjct: 392 PLITGCVCIDMYSVCMSKASAPNYKLDTMAQMYLSERKDDLSYKEIPKRFLKDD-VGRAV 450
Query: 1036 PVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLN 1095
Y + + R+ ++ + +A L L V+S G Q R+ +L +
Sbjct: 451 VGAYCVKDAAIVHRLFNVINYHYEAASIAALSRLPLRRVISDGQQSRIYICILEEGHNRD 510
Query: 1096 LIALS-PTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCI 1154
+I + P I S +FEP +Y PV V DF SLYPS++I++N C+ T +
Sbjct: 511 MIIPNLPRILDGSDAAVGYQGATVFEPVVGYYDTPVAVFDFSSLYPSIIISHNLCYCTFV 570
Query: 1155 GRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXX 1214
+ N E + + + +N + FV+ VR +L
Sbjct: 571 ----SDNEELLEDEDVYTVNF---------ENGVCR------KFVREHVRTSILGELLQR 611
Query: 1215 XXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVV 1274
+A+++SM+ DE K + +QL +K+I N YG+T SG +PC+ +A S+
Sbjct: 612 WLSQRKAIRQSMRQCEDETEKVLLDKQQLAIKVICNSFYGFTGF-ASGMLPCLPIAASIT 670
Query: 1275 AKGRETL 1281
GRE L
Sbjct: 671 RIGREML 677
>UniRef50_A0B8Z8 Cluster: DNA polymerase; n=1; Methanosaeta
thermophila PT|Rep: DNA polymerase - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 941
Score = 91.5 bits (217), Expect = 2e-16
Identities = 89/388 (22%), Positives = 168/388 (43%), Gaps = 39/388 (10%)
Query: 906 SNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQK 965
++E I + +++ +DPDI+ GY Y+ ERA LG+++ T R
Sbjct: 265 ADERALISRFVSVIDDYDPDIIAGYNSNEFDIPYLRERASRLGIEMNVGRDGSTWLIRSM 324
Query: 966 RWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWW 1025
KN + + GRV+ ++ + R +L Y+ N E++ E A++ W
Sbjct: 325 GSNKNVA-----VTGRVVVDLLPIIRSSFSLKQYTLRNAAMELIGEEKRDMDPARMESIW 379
Query: 1026 CDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVES 1085
+ I Y +++L +L ++++ LAR+ G ++++ G VE+
Sbjct: 380 LGGDGLADLI--RYSRRDAVLVMQLLLRLRLMDKYIALARVSGSLLQDIVNGGQSGMVEN 437
Query: 1086 LMLRAARPLNLIALSPTIKQRSTMR---APETLPLIFEPESRFYSDPVIVLDFQSLYPSM 1142
L+LR R + + S R A E P + + V++LD++SLYP++
Sbjct: 438 LILRRFRSHKRVLPPKPDSEESGERFTDADELKGGAVLPPVKGLVENVVILDYKSLYPTI 497
Query: 1143 MIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTS 1202
M+A+N C+ST + + + +VK SP G F S
Sbjct: 498 MMAHNLCYSTV---------------------VTKERPPEVVK------SPSGGYFASPS 530
Query: 1203 VRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSG 1262
V +G++P K MK ++ + + ++Q LK++ N YGY +
Sbjct: 531 VCKGIVPEILRELLEKRTETKMLMKSAGEDE-RAFLDAKQYALKILLNSFYGY-SGYARA 588
Query: 1263 RMPCVEVADSVVAKGRETLERAIKLVRE 1290
R+ + +A++V + GR + R +++ E
Sbjct: 589 RLYSLTLANAVTSFGRHNILRTKEMIEE 616
Score = 62.9 bits (146), Expect = 7e-08
Identities = 66/253 (26%), Positives = 110/253 (43%), Gaps = 35/253 (13%)
Query: 1285 IKLVRENTTWNAKVIYGDTDSMFVLVPGRSRL---EAFEIGQQIADAVTADNPPPVALKL 1341
I+L ++ V+YGDTDS+FV + + +A IG++IA+ +T+ P P+ L
Sbjct: 645 IELNSAGRRYDLSVVYGDTDSVFVRISSGYSITPEDAELIGRKIAETITSKLPKPMELVF 704
Query: 1342 EKVYQPCILQTKKRYVGFMFES-PDQEKP---------------------TYEAKGIETV 1379
E + I KKRY ++FE Q KP + +G+ETV
Sbjct: 705 EAFARRAIFLAKKRYALWLFERVSTQSKPLDGVEGSSKTPSEGSGIIWRDRIKVRGMETV 764
Query: 1380 RRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLP-----VHELFFTREY 1434
RRD C K LR+ L + G + + V+ + RL + + + +L TR +
Sbjct: 765 RRDWCDLTSKTLRRCLELILKEGRVDDAVQHVRDVIQRLRDMDIRRDRELLDDLVLTRRF 824
Query: 1435 -HGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQEL 1493
+ YR P ++ +++ + R +P G RV +++ G V A P E
Sbjct: 825 TKDPSSYR--NKQPHIQLVEKMRRRGGR-VPGVGDRVPFIIVKGGKKTLFVDRAEDP-EY 880
Query: 1494 TRDRSLRPHVAYY 1506
+ +L YY
Sbjct: 881 AVENNLPIDTEYY 893
>UniRef50_Q8QS34 Cluster: DNA polymerase; n=13; Herpesviridae|Rep: DNA
polymerase - Pongine herpesvirus 4 (Chimpanzee
cytomegalovirus)
Length = 1357
Score = 89.8 bits (213), Expect = 5e-16
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 19/174 (10%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+FEP +Y+DPV V DF SLYPS+++A+N C+ST + GE + P
Sbjct: 806 VFEPVVGYYNDPVAVFDFASLYPSIIMAHNLCYSTLLVP----GGEYPVD--------PA 853
Query: 1178 SKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKA 1237
++N + H FV+ SVR VL +AV++ M+ D +
Sbjct: 854 DVYSVTLENGITH------RFVRASVRVSVLSELLNKWVSQRKAVRECMRECRDPMRRML 907
Query: 1238 MHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVREN 1291
+ Q+ LK+ N YG+T +G MPC+ +A S+ GR+ LER + + +N
Sbjct: 908 LDKEQMALKVTCNAFYGFTGV-VNGMMPCLPIAASITRIGRDMLERTARFIEDN 960
Score = 59.3 bits (137), Expect = 9e-07
Identities = 45/134 (33%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
Query: 1293 TWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTAD-NPPPVALKLEKVYQPCILQ 1351
T A+VIYGDTDS+FV G + G +AD VTA PV L+ EKV+ ++
Sbjct: 1068 TVEARVIYGDTDSVFVHYRGLTAQALVSRGPALADYVTACLFNEPVKLEFEKVFVSLMMI 1127
Query: 1352 TKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMS-VVKRL 1410
KKRY+G + + KG++ VR+ C + R L LF ++S RL
Sbjct: 1128 CKKRYIGKV-----EGAAGLSMKGVDLVRKTACEFVKGVTRDVLSLLFDDREVSQAAVRL 1182
Query: 1411 VKATLSRLAETSLP 1424
+ TL + +P
Sbjct: 1183 SRLTLEDVRAQGVP 1196
>UniRef50_UPI00015B4719 Cluster: PREDICTED: similar to DNA polymerase
alpha catalytic subunit; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to DNA polymerase alpha catalytic
subunit - Nasonia vitripennis
Length = 1512
Score = 89.0 bits (211), Expect = 9e-16
Identities = 92/314 (29%), Positives = 142/314 (45%), Gaps = 16/314 (5%)
Query: 1202 SVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHS-RQLGLKLIANVTYGYTAANF 1260
+V GV+P VKK MK N K ++ RQL LKL AN YG A
Sbjct: 936 TVEDGVVPTEIRKLVQSRVEVKKLMKAPNLSPELKVQYNIRQLALKLTANSMYGCLGATH 995
Query: 1261 SGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFE 1320
R +A V KGRE L+ + LV + N +VIYGDTDS+ + + F
Sbjct: 996 C-RFYAKGLAALVTMKGREILQNSKALVEKA---NYEVIYGDTDSIMINTNILEYDQVFS 1051
Query: 1321 IGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGF-MFESPD-QEKPTYEAKGIET 1378
IG++I V V L ++ V++ +L KK+Y M +SP Q + T E KG++
Sbjct: 1052 IGKEIKKDVNKTYKK-VELDIDGVFRYLLLLQKKKYAAVTMSKSPSGQMQYTKELKGLDI 1110
Query: 1379 VRRD----GCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREY 1434
VRRD C G ++L Q L + + + + +++ + L E +LP+ L T++
Sbjct: 1111 VRRDWCGLACDIGNQILDQLLSDQSSESRVGKIFDILQQVGNNLREGNLPLSLLVITKQL 1170
Query: 1435 HGQAGYRPGASAPPNE-IAKRIGMKDRRAIPRTGWRVSWLV-TCGAPGVPLVRLARTPQE 1492
P + +A R+ R + G V +++ G PL R A +E
Sbjct: 1171 SKNPHEYPNDKKLSHVLVALRLNESGGRKW-KAGDTVPYIICEDGTDKTPLER-AYHIEE 1228
Query: 1493 LTRDRSLRPHVAYY 1506
++ +L+ V YY
Sbjct: 1229 FKKNDNLKIDVNYY 1242
Score = 58.8 bits (136), Expect = 1e-06
Identities = 59/269 (21%), Positives = 120/269 (44%), Gaps = 20/269 (7%)
Query: 902 VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEK 961
VI E+E +++ ++++ DPDI GY+ + + + ++I L V K+ S + +
Sbjct: 660 VIRCDTELELLEKFLEILQRSDPDIFVGYDC---GFQFEVIMSKIFQLKV-KNWSSVGKL 715
Query: 962 NR-QKRWMKNESDYEGRIIGRVIFNVWRLFRH-ELALSSYSFENCMYEVLNER---VPSY 1016
R + K + + GR I ++ + L + SY + VLN++
Sbjct: 716 RRLNPPYFKGKMNLGSIFCGRPICDITNSAKELNLKVRSYDLASLCVAVLNKKEYECKEV 775
Query: 1017 SYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLS 1076
+++ + ++ + + ++ + + S + ++ +L+I+ ++ + G LS
Sbjct: 776 KSEEIASKYYANAEQVEKL-IQSTMVEASYILGIVTELNILPLALQITNIAGNTLSRTLS 834
Query: 1077 RGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPET-----LP-----LIFEPESRFY 1126
G R E L+L A I + + A T P L+ EP+ FY
Sbjct: 835 AGRAERNEFLLLHAFYQKGYITPDKRTQTKKKEGAEATHGGKKKPAYAGGLVLEPKKGFY 894
Query: 1127 SDPVIVLDFQSLYPSMMIAYNYCFSTCIG 1155
++++DF SLYPS++ +N CF+T G
Sbjct: 895 DKLILLMDFNSLYPSIIQEFNLCFTTVPG 923
>UniRef50_Q5CU42 Cluster: DNA polymerase; n=2; Cryptosporidium|Rep:
DNA polymerase - Cryptosporidium parvum Iowa II
Length = 1488
Score = 88.2 bits (209), Expect = 2e-15
Identities = 139/571 (24%), Positives = 222/571 (38%), Gaps = 68/571 (11%)
Query: 904 YVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRIT-EKN 962
Y SNE + + ++ DPDI+ G+ + + ++ R +G+ + L +I
Sbjct: 598 YFSNERSLLLAFVTSFSLLDPDIIVGHNVWTDHLDVLVSRMVNIGVPNIWKLGKICISVQ 657
Query: 963 RQKRWMKN-------ESDYEGRIIGRVIFNVWRLF--RHELALSSYSFENCMYEVLNERV 1013
QK+ +K+ +S ++GRII + R + L+S E ++ ++
Sbjct: 658 NQKQSIKSLSSTKRIQSVFQGRIICDTCLSAREFMKSRTDYQLNSIFSEVFPRDLELQKA 717
Query: 1014 PSYSYAQLSDWWCDESKMLRWIPVEYY--LTKLSGTVRMLQKLDIINRTSELARLFGLQW 1071
A + + K I L G ++L L ++ T EL L G W
Sbjct: 718 SVIKPASAEAYHLETYKSFETISKSLTRDLIVSVGIFKLLFHLQVLPLTRELTNLAGFLW 777
Query: 1072 WEVLSRGSQFRVESLMLRAARPLNLIA------------------LSPTIKQRSTMRAPE 1113
+ L R E L+L + +S K + + E
Sbjct: 778 SKSLLFLRAERNEYLLLHEFHKGKFVTPDCIQRNQKYKIRAEDSLISEIDKDDNNSKKEE 837
Query: 1114 TLP--LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAW 1171
T L+ EP + Y +++LDF SLYPS++ +N CF+T R G A
Sbjct: 838 TYSGGLVLEPITGLYDSFILLLDFNSLYPSIIQEFNICFTT---REPTDLGPDA------ 888
Query: 1172 RLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQND 1231
E +SLI + F T VLP + +K+ +K
Sbjct: 889 --------TETFESSSLIDRNSSSNQFDST-----VLPGILESLVKRRRHIKEILKNMPS 935
Query: 1232 EAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVREN 1291
K + RQL LKL AN YG S R ++A + GR+ L++ KL E+
Sbjct: 936 GTRKSQLEIRQLALKLTANSLYGCLGYKNS-RFYAKDLASIITFYGRQILQKT-KLKVED 993
Query: 1292 TTWNAKVIYGDTDSMFVLVP------GRSRLEAFEIGQQIADAVTADNPPPVALKLEKVY 1345
T +VIYGDTDS+ V G ++ QI V D + L L+ V
Sbjct: 994 ET-KLQVIYGDTDSIMVNTNILDDGNGEGYYHVLKLASQIKQIVNKDYTK-LELDLDGVL 1051
Query: 1346 QPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMS 1405
Q +L KK+Y +++ E KG++ VRRD + Q L LF++ +
Sbjct: 1052 QRLLLLKKKKYACIQIVDFHRKQLKLECKGLDLVRRDWSILTRNVSTQLLNLLFSNEPID 1111
Query: 1406 VVKRLVKATLSRLAE----TSLPVHELFFTR 1432
V + TL L E S+P+ T+
Sbjct: 1112 TVITNILNTLESLNEALNSNSIPLESFIITK 1142
>UniRef50_Q4U3V0 Cluster: DNA polymerase; n=3; Ascovirus|Rep: DNA
polymerase - Trichoplusia ni ascovirus 2c
Length = 1025
Score = 87.8 bits (208), Expect = 2e-15
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 9/237 (3%)
Query: 1199 VKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAA 1258
+K+SVR G+LP + ++ + D K + RQL K+ AN YG T A
Sbjct: 634 LKSSVRPGILPNVVNKLLVERKRIRNIASVPGDPVEKALLDKRQLAYKITANSIYGATGA 693
Query: 1259 NFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEA 1318
+ +G++PC VA ++ A GR+ ++ +I++ + VIYGDTDSM+V + +
Sbjct: 694 S-NGKLPCKNVAKAITALGRKVIKESIQMASDK---GIPVIYGDTDSMYVQLSDDLE-DP 748
Query: 1319 FEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYV--GFMFESPDQEKPTYEAKGI 1376
+ Q + D +T++ P+ ++ E + KK Y+ + + EK Y GI
Sbjct: 749 WHYLQSLGDEITSNLRKPMRIESEDNISDVLFLGKKSYICRKLLKDGGISEKLDYHG-GI 807
Query: 1377 ETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTRE 1433
VRRD + + +F + VK ++ +L +P+ EL T E
Sbjct: 808 -AVRRDHSGFVKSTHNKVVHAIFADVSLQNVKHVIFEECLKLMRRKIPIDELTKTSE 863
Score = 35.9 bits (79), Expect = 9.3
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 1133 LDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYE 1167
LD S+YP+++IAYN C++T I N + ET Y+
Sbjct: 479 LDVNSMYPTLIIAYNLCYTTVI----NYDDETPYK 509
>UniRef50_Q9NAH1 Cluster: DNA polymerase; n=2; Caenorhabditis|Rep: DNA
polymerase - Caenorhabditis elegans
Length = 1428
Score = 87.4 bits (207), Expect = 3e-15
Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 12/229 (5%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMP 1265
GVLP + VK MK + +EA KK M RQ+ LKL AN YG +S R
Sbjct: 877 GVLPREIRKLVECRRDVKSLMKSERNEAKKKQMDIRQMALKLTANSMYGCLGFQYS-RFY 935
Query: 1266 CVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQI 1325
+A V AKGRE L + LV + V+YGDTDS+ + + A ++G +I
Sbjct: 936 AKPLAALVTAKGREILMHSKDLVEK---MGYSVVYGDTDSIMINTNSVDLVAAKKLGNEI 992
Query: 1326 ADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRD--- 1382
AV + + L L+ V++ +L KK+Y +PD + E KG++ VRRD
Sbjct: 993 KKAVNKCH-RLLELDLDGVFKRMLLLKKKKYAALTI-NPDTKVEAKELKGLDIVRRDWSQ 1050
Query: 1383 -GCPAGVKLLRQSLCELFTHGDM-SVVKRLVKATLSRLAETSLPVHELF 1429
G ++ + L T +M S + L++ ++L ++P+ E+F
Sbjct: 1051 LAKETGTAVVDKILDASLTRDEMVSSIDDLLREIRAKLDSGTVPL-EMF 1098
Score = 50.8 bits (116), Expect = 3e-04
Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 21/264 (7%)
Query: 905 VSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQ 964
V+NE + + ++N +PD++ G+++ ++ R E L L +SR+
Sbjct: 598 VANEKALLTLFLAMINEDEPDMIVGHDLSATI-ALLVSRLEKLKLPNWSRISRLKRSINI 656
Query: 965 KRWMKNESDYEGRIIGRVIFNVWRLFRHELALS-SYSFENCMYEVLN-ERVPSYSYAQLS 1022
+ ++S GR++ + +L EL S S+ ++L ER Y+ ++
Sbjct: 657 GKIGHSKSGQWELTAGRMMLDS-KLAAMELVKSRSFDLTELSQQILGAERREIYAN-EIP 714
Query: 1023 DWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFR 1082
+ D ++ I + LS +R++ +L+ + +++++ G + G R
Sbjct: 715 QLYVDSKDLISLINWSWNDLLLS--LRIVVRLNALPLYIQISQIVGGIASRTMMGGRAER 772
Query: 1083 VESLMLRAARPLNLIALSPTIKQRSTMRAPETLP--------------LIFEPESRFYSD 1128
E L+L A +LIA S + E+ L+ EP+ Y
Sbjct: 773 NEYLLLHAFEKADLIAPDKYNSSESKKKKEESQEGDEKKSGKAQYSGGLVLEPKKGLYET 832
Query: 1129 PVIVLDFQSLYPSMMIAYNYCFST 1152
+++LDF SLYPS++ YN C++T
Sbjct: 833 LILLLDFNSLYPSIIQEYNICYTT 856
>UniRef50_A2E9P0 Cluster: DNA polymerase; n=1; Trichomonas vaginalis
G3|Rep: DNA polymerase - Trichomonas vaginalis G3
Length = 932
Score = 85.4 bits (202), Expect = 1e-14
Identities = 71/284 (25%), Positives = 130/284 (45%), Gaps = 15/284 (5%)
Query: 1198 FVKTSVRRGVLPXXXXXXXXXXQAVKKSMK-MQNDEAVKK--AMHSRQLGLKLIANVTYG 1254
FV R G+LP + VK ++ ++ + +K+ + RQ +K++ N YG
Sbjct: 545 FVSKEKREGILPEILKDLLKSREEVKSQIEELRKENKLKEIEVLDCRQQAIKIVCNSVYG 604
Query: 1255 YTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRS 1314
+T+ G +++ + +GR A++ ++ T N VIYGDTDS+FV
Sbjct: 605 FTSFQTFG---IDQISAEITRQGRVYHYMAMQFLQ---TKNYNVIYGDTDSLFVNFGSDD 658
Query: 1315 RLEAFEIGQQIADAVTADN-PPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEA 1373
++ QI + + PV ++LEK+Y+ I+ +KK Y G + E +
Sbjct: 659 YSTVYQKSLQICEEMNEKIFENPVKIRLEKIYKNFIIFSKKHYAGIRMDLQPNE---IDI 715
Query: 1374 KGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTRE 1433
KGIET + D C L+ +SL + VK ++++ +P+ + F ++
Sbjct: 716 KGIETEKSDSCEFLKDLIFRSL-SIILQKTFDDGVNFVKEMMTKMYNGMIPLSD-FIIQK 773
Query: 1434 YHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCG 1477
GQ E+AK++ +DR+ + G ++ +LV G
Sbjct: 774 QLGQNINEYRTKTVQCEVAKKMIERDRKILLGKGDKIRFLVYKG 817
Score = 56.0 bits (129), Expect = 8e-06
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 11/171 (6%)
Query: 997 SSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDI 1056
SS + E +E+LN+ +P+ S + + +L G + ++
Sbjct: 226 SSNTLEGYCHEILNKEIPTLKNPTFSQ------NLPCKLVYNVCQKRLDGLIELIDHYKF 279
Query: 1057 INRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLP 1116
+ T +++ + + ++ R + V S +L N + S S +R
Sbjct: 280 VESTVQMSSITFVSLYQSSFRITTQMVLSKILEKCHTRNFVINSNDDSHSSGLRGGS--- 336
Query: 1117 LIFEPESRFYSDPVI-VLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAY 1166
+ EPE ++Y + DFQSLYPS++IA N CFSTC+ + ++ Y
Sbjct: 337 -VIEPEHKYYKNSFTSFFDFQSLYPSLIIAKNICFSTCLPKSDDLAANKMY 386
>UniRef50_Q0W954 Cluster: DNA-directed DNA polymerase B; n=1;
uncultured methanogenic archaeon RC-I|Rep: DNA-directed
DNA polymerase B - Uncultured methanogenic archaeon RC-I
Length = 918
Score = 85.0 bits (201), Expect = 2e-14
Identities = 124/540 (22%), Positives = 222/540 (41%), Gaps = 64/540 (11%)
Query: 978 IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPV 1037
I GR++ + W + EL ++ + + + ++ + W + + V
Sbjct: 375 IKGRLLQDAWLSVKKELRPKREGLGYVSQQLFGDTKDNINSTRIDEEWTNRRDEV----V 430
Query: 1038 EYYLTKLSGTVRMLQ--KLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLN 1095
+Y L +R+L +++ +N+ ++A L EV S G +ESLM+R N
Sbjct: 431 KYCLKDAELALRILMHPRINTLNKLMDVAIPSRLPVKEV-SGGQNRMIESLMIRMVDREN 489
Query: 1096 LIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIG 1155
+I + S +++ + + + VI LDF S+YPS +I +N CF+T +
Sbjct: 490 VI-----VPMASGETNDYEGGFVYDTKPGLW-EWVIGLDFSSMYPSQIIKHNICFTTLV- 542
Query: 1156 RVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXX 1215
++K EA H SP+G FV R G+ P
Sbjct: 543 ---------------------KNKAEA------AHESPIGACFVSKEKRYGITPRMVEGL 575
Query: 1216 XXXXQAVKKSMKMQNDEAVKKA--MHSR-QLGLKLIANVTYGYTAANFSGRMPCVE-VAD 1271
+ K MK + A ++R Q +K++AN TYGY A F R P +A
Sbjct: 576 LNSRKEAKALMKKARQDGDMDAADYYNRLQNAIKILANATYGYFGAKFC-RWPYSRYIAP 634
Query: 1272 SVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFE-IGQQIADAVT 1330
S+ + R+ + + + VI GDTDS+F L++ + +G Q+ +
Sbjct: 635 SITSWARDEIRTVVASLESR---GFTVIAGDTDSVFFTSKNHRDLDSCKMLGFQVQAEFS 691
Query: 1331 ADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKL 1390
A N + L+LEKV + KKRY G + P++ T +G E R D +
Sbjct: 692 AGN---MHLELEKVMERFFAHAKKRYFGKII-WPEE---TLLVRGYEPRRTDSFDLQSET 744
Query: 1391 LRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNE 1450
+ Q + ++ G R K + + + + + +L ++ + + Y S
Sbjct: 745 MTQ-VFQIVLEGRPDEAVRFSKDIIDKTLKGKVDLSKLIISKSVNDFSSYDNPDSLVHVN 803
Query: 1451 IAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRV 1510
+AKR+ P G + +++T G+ +R + L + + RP YYA R+
Sbjct: 804 VAKRLQEMGYEFTP--GMKTPFVITNGS--AQPIRAEPVIEGL--EFTARPDYRYYAERL 857
>UniRef50_A2DDR9 Cluster: DNA polymerase; n=1; Trichomonas vaginalis
G3|Rep: DNA polymerase - Trichomonas vaginalis G3
Length = 1367
Score = 83.4 bits (197), Expect = 5e-14
Identities = 62/273 (22%), Positives = 125/273 (45%), Gaps = 14/273 (5%)
Query: 902 VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEK 961
V + S+E + + ++L++ D DI+ Y + N + +R + L ++ + RI
Sbjct: 493 VTFYSSEKKLLKNFVRLIDKLDIDILASYTMFTNDIQVIFDRMKTLNVE---EWFRIGRL 549
Query: 962 NRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQL 1021
NR + ++ + + GR+ ++ R L L + + + + +
Sbjct: 550 NRSTQIKTSKYNASFCLSGRIAVDIRTNLREFLNLPANDLSSVSLQEFGIKRQQIENVDI 609
Query: 1022 SDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQF 1081
D +K++ I E++ + ++++K +++ T L+++ GL W + L +
Sbjct: 610 LKEINDRNKVISLI--EFFERDTNILTKLMEKTNLLEITFRLSQISGLLWCKTLKSKPSY 667
Query: 1082 RVESLMLRAARPLNLIALSPTIKQRSTMRAPETL-----PLIFEPESRFYSDPVIVLDFQ 1136
R ES++L + + N + P KQ++ L + +P+ FY +++LDF
Sbjct: 668 RCESILLHSFKEKNFVL--PDKKQKADFAPKSKLGKYRGATVLQPKKGFYDTIIVLLDFT 725
Query: 1137 SLYPSMMIAYNYCFSTCIGRVQNINGETAYEFG 1169
SLYPS++ YN CF+T R N N E A G
Sbjct: 726 SLYPSIISEYNLCFTTVDKR--NPNSEEAVNCG 756
Score = 74.9 bits (176), Expect = 2e-11
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 7/207 (3%)
Query: 1204 RRGVLPXXXXXXXXXXQAVKKSMK-MQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSG 1262
R+G+LP +K M +Q+D+ +Q +K ++N YGY + S
Sbjct: 757 RKGILPEIMENLTKMRIELKNKMNTLQDDKFNFDRFLIKQQAIKSLSNSIYGYLGFSLS- 815
Query: 1263 RMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIG 1322
R E+A + +GR L++ ++ V ++ VIYGDTDS+ V +S EA +I
Sbjct: 816 RFASNEIAALITERGRFVLQKTVETVESLGKFS--VIYGDTDSVMVNTGTKSVEEAKKIA 873
Query: 1323 QQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRD 1382
I++ VT + L + ++ +L KK+Y +++ D K E KG++ VRRD
Sbjct: 874 NDISEKVTKQY-KFLKLTVSGLFTKMLLVAKKKYAVTVYD--DDNKCHREVKGLDMVRRD 930
Query: 1383 GCPAGVKLLRQSLCELFTHGDMSVVKR 1409
C L L ++ + D S+ R
Sbjct: 931 WCQLTKYLSSFVLDQMMNNDDRSLTVR 957
>UniRef50_Q9YUS3 Cluster: DNA polymerase; n=4; Herpesviridae|Rep: DNA
polymerase - Tupaiid herpesvirus 1 (strain 1) (TuHV-1)
(Herpesvirus tupaia (strain1))
Length = 1171
Score = 83.0 bits (196), Expect = 6e-14
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 33/256 (12%)
Query: 1194 VGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTY 1253
V FV+ +VR +L +AV+++M+ DE + + QL LK+ N Y
Sbjct: 747 VSYRFVRENVRASILSELLRRWLAQRRAVREAMRECEDETRRLLLDKEQLALKVTCNAFY 806
Query: 1254 GYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNA----------------- 1296
G+T + G +PC+ VA S+ GR+ L R + + A
Sbjct: 807 GFTGFS-QGMLPCLPVAASITTIGRDMLSRTSAYIEAHFAEPAFLARFFEPGDLPRADEP 865
Query: 1297 ----KVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVT-ADNPPPVALKLEKVYQPCILQ 1351
+VIYGDTDS+FV G G+ +A AVT A PV L+ EK++ ++
Sbjct: 866 PPTVRVIYGDTDSVFVRFGGVRAGAIVARGEDLAAAVTEALFTEPVKLEFEKLFVALMMI 925
Query: 1352 TKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVK--- 1408
KKRY+G +F S KG++ VR+ C VK + + + EL D +V +
Sbjct: 926 CKKRYIGRVFGS-----DALVMKGVDLVRKTAC-RFVKTVVRDVVEL-VFRDAAVAEAAT 978
Query: 1409 RLVKATLSRLAETSLP 1424
R+ + TL + +P
Sbjct: 979 RMSELTLEEMRRVGVP 994
Score = 54.8 bits (126), Expect = 2e-05
Identities = 59/271 (21%), Positives = 113/271 (41%), Gaps = 32/271 (11%)
Query: 907 NEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKR 966
+E E + + P+ + GY I W Y+L RAE + + + +R+ R
Sbjct: 377 SEFELLCGFFTFFGRYAPEFVTGYNINNFDWRYLLTRAERVYRWPVAEYTRLRFGGRFCA 436
Query: 967 WMKN---------ESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYS 1017
++ + + I G V+ +++ + +++ Y L + S
Sbjct: 437 YVPGGGGRQPGFRTAQTKVLITGTVVLDLYPVCMAKVSAPDYKLNTVCELYLGRQKEDLS 496
Query: 1018 YAQLSDWWCD----ESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWE 1073
Y +L + +++ R+ + L K + +KL+ + +ARL + +
Sbjct: 497 YKELPRAFLSGDAGRARVGRYCVQDAVLVK-----ELFEKLNYHYEAAAVARLARISLRK 551
Query: 1074 VLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAP---------ETL---PLIFEP 1121
V+ G Q R+ + +L A ++ PT + + A ET +FEP
Sbjct: 552 VIFEGQQIRIYTCLLEEAAARQMVV--PTFRSGAQRGAATGAGGGGGEETTYQGATVFEP 609
Query: 1122 ESRFYSDPVIVLDFQSLYPSMMIAYNYCFST 1152
++ PV V DF SLYPS+++A+N C+ST
Sbjct: 610 TVGYHHAPVAVFDFASLYPSIIMAHNLCYST 640
>UniRef50_Q990K4 Cluster: DNA polymerase; n=9; Chlorovirus|Rep: DNA
polymerase - Paramecium bursaria Chlorella virus 1
(PBCV-1)
Length = 215
Score = 82.6 bits (195), Expect = 8e-14
Identities = 73/237 (30%), Positives = 113/237 (47%), Gaps = 38/237 (16%)
Query: 1126 YSDPVIVLDFQSLYPSMMIAYNYCFSTCI--GRVQNINGETAYEFGAWRLRIPRSKLEAL 1183
Y P+ LDF SLYPS++ A+N T + R +N+ G YE G
Sbjct: 5 YFTPIAALDFASLYPSIIRAHNMSPETLVMDARYKNLPGVEYYEIGT------------- 51
Query: 1184 VKNSLIHWSPVGIGFVKTSVR-RGVLPXXXXXXXXXXQAVKKSMKMQNDEA--VKKAMH- 1239
GIG + S + +GV+P + KK M + E K+A++
Sbjct: 52 -----------GIGTFRYSQQSQGVVPALLDDLAKFRKNAKKLMAAAHKEGDDFKEALYD 100
Query: 1240 SRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVI 1299
+ Q K++ N YG+ A+ G +PCV +A SV A GR ++ A + E ++VI
Sbjct: 101 ASQRSYKVVMNSVYGFLGAS-KGFLPCVPIAASVTATGRNMIDVASRRAIELLP-GSEVI 158
Query: 1300 YGDTDSMFV---LVPGRSRLEA---FEIGQQIADAVTADNPPPVALKLEKVYQPCIL 1350
YGDTDS+ V L G+++ + FE+ + +A +T + P L+ EK+Y P IL
Sbjct: 159 YGDTDSIMVKMKLPEGKNQEDINDHFEVAKWLAGEITKEYRAPNDLEFEKIYYPYIL 215
>UniRef50_Q8QZ01 Cluster: DNA polymerase; n=8; Ranavirus|Rep: DNA
polymerase - Rana tigrina ranavirus
Length = 1013
Score = 82.6 bits (195), Expect = 8e-14
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 5/189 (2%)
Query: 1196 IGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGY 1255
+ F++ + ++GV+P + KK+ D K M RQL K+ AN YG
Sbjct: 595 LAFLEPATKKGVMPTILTDLLDGRKRAKKAKAEAKDSITKITMDKRQLAYKVSANSMYGA 654
Query: 1256 TAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFV-LVPGRS 1314
G +P + A +V GR+ +E+A ++ + +++YGDTDS +V ++
Sbjct: 655 MGVK-RGYLPFQDGAMTVTYFGRQCIEKAASII--GSEHGGQLVYGDTDSNYVTFADAKT 711
Query: 1315 RLEAFEIGQQIADAVTADNPPPVALKLEKV-YQPCILQTKKRYVGFMFESPDQEKPTYEA 1373
E ++ +A AV++ PPP++L+ E+V Y ++ KKRY+ +
Sbjct: 712 PAELWDKAVAVAKAVSSVFPPPISLEFEQVIYTKFLILGKKRYIYLSCDRDGNSSGKMGF 771
Query: 1374 KGIETVRRD 1382
+G+ RRD
Sbjct: 772 RGVLMARRD 780
Score = 45.6 bits (103), Expect = 0.012
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 1038 EYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLI 1097
EY + + V +++KL + +E+A++ + + + ++G Q R+ S + +
Sbjct: 372 EYCVKDVQLCVDLMEKLQVWVGLTEMAKVCRVNAFTLFTQGQQIRIYSQVYCHCEKNGYV 431
Query: 1098 ALSPTIKQR-------STMRAPETLPL---IFEPESRFYSDPVIVLDFQSLYPSMMIAYN 1147
P +R P+ + + EP Y D V+ LDF SLYPS+MIA N
Sbjct: 432 VTDPADGKRVPWGQDPPVSDEPDEDYIGAHVVEPSPGIY-DNVVPLDFSSLYPSIMIAKN 490
Query: 1148 YCFST 1152
C+ST
Sbjct: 491 VCYST 495
>UniRef50_Q97AH3 Cluster: DNA polymerase; n=6; Euryarchaeota|Rep: DNA
polymerase - Thermoplasma volcanium
Length = 800
Score = 82.6 bits (195), Expect = 8e-14
Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 16/291 (5%)
Query: 1192 SPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANV 1251
SP GI F+ ++G++P VKK MK E + Q +K++ N
Sbjct: 439 SPTGIRFLSPEKKKGLIPRILQELMADRDDVKKRMKEAKSEDERLFYDGIQNAIKVLMNT 498
Query: 1252 TYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVP 1311
YG A++F R ++ ++ A RET++ I ++ + +VIYGDTDS+FV
Sbjct: 499 FYGVLASSFY-RFTDPKIGSAITAFARETIKHIIDVLESS---GHRVIYGDTDSVFVESG 554
Query: 1312 GRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQ-TKKRYVGFMFESPDQEKPT 1370
+ +A + G++++ ++ + + L + V P KKRY G P+ K
Sbjct: 555 DVRQEDAIKTGKELSQKLSEEE--GLTLDFQMVLDPFFSHGAKKRYAG-KCVYPEDMKGE 611
Query: 1371 YEAKGIETVRRDGC---PAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHE 1427
KG E R D + + + + G ++ LVK R + S+ +
Sbjct: 612 IIIKGYEVRRTDSFDLQSTALSKVIDFILDRDVQGAINYADDLVKKV--RNGDPSIDIES 669
Query: 1428 LFFTREYHGQAGYRPGASAPPN-EIAKRIGMKDRRAIPRTGWRVSWLVTCG 1477
L +R + Y+ + N A+++ + +P G +VSW+VT G
Sbjct: 670 LVISRTVKDFSSYKANTDSLANIRAARKLIERGETFVP--GMKVSWIVTNG 718
Score = 69.3 bits (162), Expect = 8e-10
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 18/247 (7%)
Query: 907 NEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKR 966
+E E + I L+ DPD++ GY I+ + R E G+ + +L R + + +R
Sbjct: 201 DEKEILYRFIDLIRAEDPDVITGYNIDGYDMLVIQRRMEQYGIHL--NLGR--DGSVPRR 256
Query: 967 WMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWC 1026
M D R+ GR+I + W + L S + ++L E S + W
Sbjct: 257 IM----DQFWRVHGRLISDTWWNVKKILHPKHESLDYIAMKLLGEGKDSIDRLNIEAEWQ 312
Query: 1027 DESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESL 1086
+ + Y + T+R+ +KL ++ R ++ + L +V + G+ V+S+
Sbjct: 313 KRQDEV----ISYCIKDADLTLRIFEKLRVLERLMFMSTVTKLPLDDVANAGTSNYVDSI 368
Query: 1087 MLRAARPLNL-IALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIA 1145
++RAA N+ + ++ + ++ + + YS+ VIVLDF+S+YPSM+I
Sbjct: 369 LIRAADRENIGVPMNAHNLKEDEIQGG----YVHTIGAGLYSN-VIVLDFKSMYPSMIIK 423
Query: 1146 YNYCFST 1152
YN CF+T
Sbjct: 424 YNVCFTT 430
>UniRef50_P30317 Cluster: DNA polymerase (EC 2.7.7.7) (Vent DNA
polymerase) [Contains: Endonuclease PI-TliII (EC 3.1.-.-)
(Tli pol-1 intein) (IVPS2); Endonuclease PI-TliI (EC
3.1.-.-) (Tli pol-2 intein) (IVPS1)]; n=8;
Thermococcaceae|Rep: DNA polymerase (EC 2.7.7.7) (Vent
DNA polymerase) [Contains: Endonuclease PI-TliII (EC
3.1.-.-) (Tli pol-1 intein) (IVPS2); Endonuclease PI-TliI
(EC 3.1.-.-) (Tli pol-2 intein) (IVPS1)] - Thermococcus
litoralis
Length = 1702
Score = 82.2 bits (194), Expect = 1e-13
Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 11/279 (3%)
Query: 872 NHFLKKSLTGIIVVDSSSRKYLDGCVFNVPVI-YVSNEIETIDEVIKLVNIHDPDIMCGY 930
+ F K + I D + + ++P + VSNE E I +++V DPD++ Y
Sbjct: 150 DEFGKGEIIMISYADEEEARVITWKNIDLPYVDVVSNEREMIKRFVQVVKEKDPDVIITY 209
Query: 931 EIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLF 990
+ Y+++RAE LG+ ++ L R E K +S + I GR+ F+++ +
Sbjct: 210 NGDNFDLPYLIKRAEKLGVRLV--LGRDKEHPEPKIQRMGDS-FAVEIKGRIHFDLFPVV 266
Query: 991 RHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRM 1050
R + L +Y+ E VL + +++ W E M + +Y + T +
Sbjct: 267 RRTINLPTYTLEAVYEAVLGKTKSKLGAEEIAAIWETEESMKKL--AQYSMEDARATYEL 324
Query: 1051 LQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMR 1110
+ + +ELA+L G W+V + VE +LR A N +A + ++ R
Sbjct: 325 GK--EFFPMEAELAKLIGQSVWDVSRSSTGNLVEWYLLRVAYARNELAPNKPDEEEYKRR 382
Query: 1111 APETL--PLIFEPESRFYSDPVIVLDFQSLYPSMMIAYN 1147
T + EPE + + +I LDF+SLYPS+++ +N
Sbjct: 383 LRTTYLGGYVKEPEKGLWEN-IIYLDFRSLYPSIIVTHN 420
Score = 41.1 bits (92), Expect = 0.25
Identities = 38/182 (20%), Positives = 76/182 (41%), Gaps = 11/182 (6%)
Query: 1298 VIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYV 1357
++ +TD + +PG + ++ + + + P + L+ E Y TKKRY
Sbjct: 1467 ILVHNTDGFYATIPGEKPELIKKKAKEFLNYINSKLPGLLELEYEGFYLRGFFVTKKRYA 1526
Query: 1358 GFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSR 1417
E+ +G+E VRRD + + L + G + +V+ + +
Sbjct: 1527 VI------DEEGRITTRGLEVVRRDWSEIAKETQAKVLEAILKEGSVEKAVEVVRDVVEK 1580
Query: 1418 LAETSLPVHELFFTREY-HGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTC 1476
+A+ +P+ +L + Y+ A P IAKR+ + + P G +S++V
Sbjct: 1581 IAKYRVPLEKLVIHEQITRDLKDYK--AIGPHVAIAKRLAARGIKVKP--GTIISYIVLK 1636
Query: 1477 GA 1478
G+
Sbjct: 1637 GS 1638
>UniRef50_Q196U0 Cluster: DNA polymerase; n=5; Iridoviridae|Rep: DNA
polymerase - Aedes taeniorhynchus iridescent virus
Length = 1141
Score = 81.8 bits (193), Expect = 1e-13
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 12/214 (5%)
Query: 1238 MHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAK 1297
++ RQL K+ AN YG T +G +P + VA S+ GR + R +L++ T + +
Sbjct: 679 LNQRQLAYKVSANSMYGITGVK-AGMLPFMPVAMSITFMGRTNIARVAQLLQ--TQYQGE 735
Query: 1298 VIYGDTDSMFVLVPGR--SRLEAFEIGQQIADAVTADNPPPVALKLEK-VYQPCILQTKK 1354
++YGDTDS +V + S E ++ ++AD ++ PPP+ L+ E+ +Y ++ TKK
Sbjct: 736 LVYGDTDSNYVSFNHKNMSMSELWDYAIRVADEISQQFPPPIKLEFEEAIYSKFLILTKK 795
Query: 1355 RYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTH--GD----MSVVK 1408
RY+ K +G+ RRD K+ + + +F H G+ SVV
Sbjct: 796 RYLYQTALRDGTIKKEIGKRGVVLNRRDNSGFIRKIYQNMVDSIFNHVAGEGRDLKSVVL 855
Query: 1409 RLVKATLSRLAETSLPVHELFFTREYHGQAGYRP 1442
+V A + L PV + T+ +P
Sbjct: 856 DVVTADICALFNHQFPVDDFVITKSTGNYGDLQP 889
Score = 50.8 bits (116), Expect = 3e-04
Identities = 58/272 (21%), Positives = 117/272 (43%), Gaps = 18/272 (6%)
Query: 897 VFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLS 956
+ ++ S E + + LVN +P+++ GY I Y+++R + V
Sbjct: 280 IVGATILRYSTEKKLLMGFRDLVNEKNPNVITGYNIFNFDIPYLMDRTVYKSIFVEWAQQ 339
Query: 957 RITEKN----RQKRWMKNE-SDYEGRII---GRVIFNVWRLFRHELALSSYSFENC---- 1004
+ R+ RW + + E + + GR+ ++ + + + L+ Y +
Sbjct: 340 GFAKNRPGIPREIRWSSSAYKNQEFKYLDCEGRLYIDLLPVVQRDFKLNDYKLKTVSTFF 399
Query: 1005 MYEVLNERVPSYSYAQLSDWWCDES-KMLRWIPV--EYYLTKLSGTVRMLQKLDIINRTS 1061
+ E ++ P+ + + D+S K ++ + +Y + ++ +KL++ S
Sbjct: 400 IGETKDDLDPTSIFRCYREGTRDDSPKASHFMSICGKYCMQDSMLVYKLFEKLNVWYGLS 459
Query: 1062 ELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEP 1121
E+A + + + ++G Q +V S + + +I R +F P
Sbjct: 460 EMAVVCNVPMITLFTKGQQIKVYSQLYKYCLAAKIIPEKDGYIVAENERYVGAH--VFTP 517
Query: 1122 ESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTC 1153
+ Y + VI LDF SLYPS+MIAYN +STC
Sbjct: 518 KPGLYEN-VIPLDFSSLYPSLMIAYNIDYSTC 548
>UniRef50_A7KAV6 Cluster: DNA polymerase; n=1; Microtus arvalis
cytomegalovirus 1|Rep: DNA polymerase - Microtus arvalis
cytomegalovirus 1
Length = 924
Score = 81.4 bits (192), Expect = 2e-13
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+ P+ F+ DPV+V DF SLYPS+++++N C+ST +G +G G P
Sbjct: 743 VLPPDVGFHHDPVLVFDFASLYPSIIMSHNLCYSTLLGPGSPTDG-----LG------PE 791
Query: 1178 SKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKA 1237
LE V H FV+ VRR +L + V++ K +D +
Sbjct: 792 DVLEVEVAPGRTH------RFVREHVRRSLLAELLVRWLAERRLVRERAKQTDDPMRRTI 845
Query: 1238 MHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVREN 1291
+ +QL LK+ N YG+T +G +PC+ VA S+ GR+ L + V E+
Sbjct: 846 LDKQQLALKVTCNAFYGFTGV-AAGMLPCLAVASSITKIGRDMLMATVDYVHEH 898
>UniRef50_Q013X2 Cluster: DNA polymerase; n=2; Ostreococcus|Rep: DNA
polymerase - Ostreococcus tauri
Length = 1530
Score = 81.0 bits (191), Expect = 3e-13
Identities = 73/276 (26%), Positives = 126/276 (45%), Gaps = 12/276 (4%)
Query: 1207 VLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPC 1266
VLP + VK M ++D A KK RQL LKL AN YG + S R
Sbjct: 951 VLPAVIASIVRSRKDVKGLMAKESDPARKKQYDLRQLALKLTANSMYGCLGFSQS-RFYA 1009
Query: 1267 VEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIA 1326
+A + ++GR L+ + L R+ + VIYGDTDS+ V ++ +A G ++
Sbjct: 1010 EAIAALITSQGRTILQHTVDLARQKC--DLDVIYGDTDSIMVNTGTKNLDQARAAGNKLI 1067
Query: 1327 DAVTADNPPPVALKLEKVYQPCILQTKKRYVGF-MFESPDQEKPT-YEAKGIETVRRDGC 1384
V + + L+ + ++ +L KK+Y + P+ K T E KG++ VRRD
Sbjct: 1068 RFVNREY-RKLVLEEDYAFRSMLLLKKKKYAAMKVVNGPNGTKMTELEMKGLDIVRRDWA 1126
Query: 1385 PAGVKLLRQSLCELF-THGDM----SVVKRLVKATLSRLAETSLPVHELFFTREYHGQAG 1439
P ++ +Q+L EL G++ + + L++ + +P+ + T++
Sbjct: 1127 PLVKEIGKQTLEELLEVDGELEERVTAIHDLLREIRVEMVANRVPLDKYIITKQLTKAVE 1186
Query: 1440 YRPGASAPPN-EIAKRIGMKDRRAIPRTGWRVSWLV 1474
P A P+ +AKR ++ R G V +++
Sbjct: 1187 EYPDAKHQPHVMVAKRRLEAGKQDGVRAGETVPYII 1222
Score = 58.4 bits (135), Expect = 2e-06
Identities = 63/271 (23%), Positives = 119/271 (43%), Gaps = 27/271 (9%)
Query: 906 SNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQK 965
+NE+ ++ ++ ++ DPD++ G+ I + +L R + + + R+ ++ R
Sbjct: 657 NNELGLLNFLLAKLHQLDPDVIVGHNIGGFNLDVLLRRFQANKIGHWSRIGRM-KRTRMP 715
Query: 966 RWMKNESDYEGR--------IIGRVIFNVWRLFRHELALS-SYSFENCMYEVLNERVPSY 1016
+ Y G I GR++ + + + L SY+ + LN R
Sbjct: 716 NINGSGGAYGGGASLGAMQCITGRLLADTYLSAKDLLGKEVSYTLSSLSQTQLNVRREEI 775
Query: 1017 SYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLS 1076
+ A++ + + ++ I KLS + ++ K+++I T +L+ + G W + L
Sbjct: 776 AGAEIPNHYMQTQSLMHLIKCTEIDAKLS--LHLMFKMEVIPLTKQLSNIAGNLWSKTLG 833
Query: 1077 RGSQFRVESLMLRAARPLNLIA---LSPTIKQRSTM-----------RAPETLP-LIFEP 1121
RVE L+L I LS ++R + P L+ EP
Sbjct: 834 HTRAQRVEYLLLHEFHKRKHILPDRLSSKERRRVAAVNGDEEDDGGKKGPSYAGGLVLEP 893
Query: 1122 ESRFYSDPVIVLDFQSLYPSMMIAYNYCFST 1152
+ Y D V+VLD+QSLYPS++ YN C++T
Sbjct: 894 KKGLYDDFVLVLDYQSLYPSIIQEYNICYTT 924
>UniRef50_Q7QQB5 Cluster: DNA polymerase; n=2; Giardia
intestinalis|Rep: DNA polymerase - Giardia lamblia ATCC
50803
Length = 1730
Score = 80.6 bits (190), Expect = 3e-13
Identities = 87/339 (25%), Positives = 151/339 (44%), Gaps = 34/339 (10%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPR 1177
+ +P + F+ VIVLDF SLYP+++ Y+ CF+T QN + P
Sbjct: 982 VMDPVAGFHDKIVIVLDFNSLYPNIIREYSLCFTTL--DPQNY---VTWPDPTNTTDDP- 1035
Query: 1178 SKLEALVKNSLIHWSPVGIGFVKTSVRRG---VLPXXXXXXXXXXQAVKK------SMKM 1228
S L L + W+ V+ S + +LP QA+K+ +M++
Sbjct: 1036 SGLIHLHADPQDTWNQTIEEEVRASKQISHTVILPKIIARLITQRQAIKRKIKDLEAMQV 1095
Query: 1229 QNDEAVK---KAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAI 1285
++D+ + K + QL +KL AN YG + GR C VA + A+GR L RA
Sbjct: 1096 KDDKTISQRLKMLEISQLAIKLCANAMYGSLGYQY-GRFYCPHVAARIPARGRLELTRAS 1154
Query: 1286 KLVRENTTWNAKVIYGDTDSMFVLVPGR-SRLEAFEIGQQIADAVTA------DNPPPVA 1338
+ ++ +VIYGDTDS+ + ++ E +I Q+ T ++ +
Sbjct: 1155 NIAKQQ---GYQVIYGDTDSIMIKTNIEYNKSEKHKIMAQVKAIATTISSRVGEDRKYLQ 1211
Query: 1339 LKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCEL 1398
L L+ ++ +L KK+Y PD E KG++ VRRD CP + +++L +
Sbjct: 1212 LGLDYIFIKYLLLQKKKYAATRL-FPDFSV-ALEYKGLDLVRRDWCPISRTISKRALEII 1269
Query: 1399 FTHGDMSVVKRLVK---ATLSRLAETSLPVHELFFTREY 1434
+ + L+ A+ + + P EL + +++
Sbjct: 1270 MGYPQNVIASNLLNMLVASYKDILASRTPARELKYAQQF 1308
>UniRef50_Q7R6L0 Cluster: DNA polymerase; n=1; Giardia lamblia ATCC
50803|Rep: DNA polymerase - Giardia lamblia ATCC 50803
Length = 1184
Score = 80.2 bits (189), Expect = 4e-13
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 9/182 (4%)
Query: 1298 VIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYV 1357
VIYGDTDS+ V + +EA + + + VT P+ L+ EKVY P +L KKRY
Sbjct: 784 VIYGDTDSVMVKFGVDNLMEAMMLAKYASTYVTQSFIRPINLEFEKVYCPYLLLNKKRYA 843
Query: 1358 GFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGD----MSVVKRLVKA 1413
G + +P + ++KG+E VRRD C V ++ + L LF + D +S VK +V
Sbjct: 844 GQYWTNP-FKPDKIDSKGLELVRRDNCRLVVIVMEKILDVLFNYSDPQKAISYVKSVVHD 902
Query: 1414 TLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWL 1473
+S+ + SL V T+ + Y N +A R+ +D P+ G RV ++
Sbjct: 903 LISQRIDLSLLVISKALTQSV---SSYTNKQQTHVN-LAMRMMERDPMTAPKVGDRVPYV 958
Query: 1474 VT 1475
VT
Sbjct: 959 VT 960
Score = 75.4 bits (177), Expect = 1e-11
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 1186 NSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGL 1245
N LI +P+ F+K +V G+LP + K+ MK D K ++ RQL L
Sbjct: 565 NELITVTPIKARFLKKTVFPGILPKILQVLLDARKRAKQDMKKAVDPLAKDVLNGRQLAL 624
Query: 1246 KLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGD-TD 1304
KLIAN YG+T A G++P E++ S+ A GRE + +V E VI D TD
Sbjct: 625 KLIANSLYGFTGALSFGKLPSQEISSSITAFGREMINHTKNVVEERFHRKQPVIEIDITD 684
Query: 1305 SMF 1307
S++
Sbjct: 685 SIY 687
Score = 73.7 bits (173), Expect = 4e-11
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 958 ITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYS 1017
I + Q + + YE GR+ ++ H+ L SY+ + LNE+
Sbjct: 275 IAVSHLQSKQLGKRDTYEIECPGRISMDILPNIIHDYKLRSYTLNSVCARFLNEQKDDVH 334
Query: 1018 YAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSR 1077
Y+ ++ + + R I + Y + +++++KL I+ T EL R+ GL +L
Sbjct: 335 YSMITPLFMQDEYGRRRITL-YCIKDCKLPLKLMEKLMILVNTIELCRVSGLCGSLLLYS 393
Query: 1078 GSQFRVESLMLR-AARPLNLIALSPTIKQRST---MRAPETL--PLIFEPESRFYSD--P 1129
G Q R+ SL+ R +A LI T E+L + P+ FYSD P
Sbjct: 394 GQQIRILSLLYRFSAAESYLIPYRIRTGGGYTGGFSGDSESLEGATVLNPKRGFYSDKQP 453
Query: 1130 VIVLDFQSLYPSMMIAYNYCFSTCI 1154
+ LDF SLYP+++IA+N C+ST I
Sbjct: 454 IATLDFNSLYPTIIIAHNLCYSTMI 478
>UniRef50_O59610 Cluster: DNA polymerase (EC 2.7.7.7) [Contains: Pho
pol intein (Pho Pol I intein)]; n=11; Archaea|Rep: DNA
polymerase (EC 2.7.7.7) [Contains: Pho pol intein (Pho
Pol I intein)] - Pyrococcus horikoshii
Length = 1235
Score = 80.2 bits (189), Expect = 4e-13
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 15/278 (5%)
Query: 874 FLKKSLTGIIVVDSSSRKYLDGCVFNVPVI-YVSNEIETIDEVIKLVNIHDPDIMCGYEI 932
F K + I D K + ++P + VS+E E I +I+++ DPD++ Y
Sbjct: 152 FGKGPVIMISYADEEGAKVITWKKIDLPYVEVVSSEREMIKRLIRVIKEKDPDVIITYNG 211
Query: 933 EMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRH 992
+ + Y+L+RAE LG+ +L + N + + K I GR+ F+++ + R
Sbjct: 212 DNFDFPYLLKRAEKLGIKLL-----LGRDNSEPKMQKMGDSLAVEIKGRIHFDLFPVIRR 266
Query: 993 ELALSSYSFENCMYEVLNERVPSYSYA-QLSDWWCDESKMLRWIPVEYYLTKLSGTVRML 1051
+ L +Y+ E +YE + + YA +++ W + + L + +Y + T +
Sbjct: 267 TINLPTYTLE-AVYEAIFGKPKEKVYADEIAKAW-ETGEGLERV-AKYSMEDAKVTYELG 323
Query: 1052 QKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRA 1111
+ + ++LARL G W+V + VE +LR A N +A + ++ R
Sbjct: 324 R--EFFPMEAQLARLVGQPVWDVSRSSTGNLVEWFLLRKAYERNELAPNKPDEKEYERRL 381
Query: 1112 PETLP--LIFEPESRFYSDPVIVLDFQSLYPSMMIAYN 1147
E+ + EPE + + ++ LDF+SLYPS++I +N
Sbjct: 382 RESYEGGYVKEPEKGLW-EGIVSLDFRSLYPSIIITHN 418
Score = 60.5 bits (140), Expect = 4e-07
Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 16/236 (6%)
Query: 1244 GLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDT 1303
GL N YGY R C E A+SV A GR+ ++ + RE KV+Y DT
Sbjct: 946 GLLYAHNSYYGYYGYA-KARWYCKECAESVTAWGRQYIDL---VRRELEARGFKVLYIDT 1001
Query: 1304 DSMFVLVPG-RSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFE 1362
D ++ +PG + E + D + + P + L+ E Y TKK+Y
Sbjct: 1002 DGLYATIPGVKDWEEVKRRALEFVDYINSKLPGVLELEYEGFYARGFFVTKKKYALI--- 1058
Query: 1363 SPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETS 1422
E+ +G+E VRRD + + L + HG++ ++VK +L
Sbjct: 1059 ---DEEGKIVTRGLEIVRRDWSEIAKETQARVLEAILKHGNVEEAVKIVKDVTEKLTNYE 1115
Query: 1423 LPVHELFFTREYHGQAG-YRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCG 1477
+P +L + Y+ A P +AKR+ + + P G + ++V G
Sbjct: 1116 VPPEKLVIYEQITRPINEYK--AIGPHVAVAKRLMARGIKVKP--GMVIGYIVLRG 1167
>UniRef50_Q4P5T4 Cluster: DNA polymerase; n=1; Ustilago maydis|Rep:
DNA polymerase - Ustilago maydis (Smut fungus)
Length = 1667
Score = 79.8 bits (188), Expect = 6e-13
Identities = 100/403 (24%), Positives = 168/403 (41%), Gaps = 26/403 (6%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIP 1176
L+FEP+ + ++V+DF SLYPS++ +N F+T + R G E G
Sbjct: 989 LVFEPKRGLWDKYILVMDFNSLYPSIIQEFNIDFTT-VERPPT-QGIEDDEIGVAAATAS 1046
Query: 1177 RSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKK 1236
++ + + V +GVLP + VK MK ++ +
Sbjct: 1047 SDTAGEAGADAAADVDKIP-DVPSSDVEQGVLPRIIAQLVARRRQVKSLMKDKSATPSQL 1105
Query: 1237 AMHS-RQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWN 1295
+ +QL LKL AN YG S R +A KGRE L A K + E+ +
Sbjct: 1106 LQWNIKQLALKLTANSMYGCLGFENS-RFYARPLAALTTFKGREILT-ATKDLAESMLLD 1163
Query: 1296 AKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKR 1355
VIYGDTDS+ + EA IGQ+ +V + + + ++ V++ +L KK+
Sbjct: 1164 --VIYGDTDSVMINTNATEYREALRIGQEFKKSVN-ERYRLLEIDIDGVFERMLLLQKKK 1220
Query: 1356 YVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATL 1415
Y + + ++ K + E KG++ RR+ + L ++ + +V + L
Sbjct: 1221 YAAVLVD--EEGKRSTEIKGLDMKRREYSALSKNVSNYVLEQILSGQATELVVEHIHEYL 1278
Query: 1416 SRLAETSLPVHE------LFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWR 1469
S ++ T + + E + + R Y S P ++A R MK R R G
Sbjct: 1279 SDIS-TKIKMGEVGLDDFIIYKRLGKNPEDYPDVKSQPHVQVALR--MKTRGGNARMGDV 1335
Query: 1470 VSWLVTCGAPGVPLVRLART-----PQELTR-DRSLRPHVAYY 1506
+ ++ G G + A+ P EL R D L+ +Y
Sbjct: 1336 IPYIFCLGEDGTSSTKTAQAERAHHPDELRRKDSELKIDYEHY 1378
>UniRef50_O70736 Cluster: DNA polymerase; n=7; Infectious spleen and
kidney necrosis virus|Rep: DNA polymerase - Red sea bream
iridovirus (RSIV)
Length = 947
Score = 78.6 bits (185), Expect = 1e-12
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 11/215 (5%)
Query: 1172 RLRIPRSKLE-ALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQN 1230
R RI K++ A + S++ + F T GVLP V+ +K +
Sbjct: 530 RERISEMKIQYASMTPSVVKCNVFSFRF--THAHEGVLPRVLRNLLESRARVRARIKTTD 587
Query: 1231 DEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRE 1290
D ++ + +QL K+ AN YG T G +P + A + GR+ +E+A L++
Sbjct: 588 DPDIRAVLDKKQLAYKISANSVYG-TMGTQRGYLPFMAGAMTTTYCGRKLIEKAAHLLK- 645
Query: 1291 NTTWNAKVIYGDTDSMFV-LVPGRSRL-EAFEIGQQIADAVTADNPPPVALKLEK-VYQP 1347
T A ++YGDTDS ++ L R+ L E +++ +D V+A PV L+ E+ +Y
Sbjct: 646 -TVVGATIVYGDTDSCYIQLGHDRASLDELWQMAVNASDTVSAFFERPVRLEFEQCIYTK 704
Query: 1348 CILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRD 1382
I+ TKKRYV F +++ +KG+ RRD
Sbjct: 705 FIIFTKKRYVYRAFTRDGKQRT--GSKGVMLSRRD 737
Score = 46.0 bits (104), Expect = 0.009
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 1062 ELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQR---STMRAPE--TLP 1116
E+A + ++ ++G Q RV + + R P++++ I S + +P T
Sbjct: 381 EMAGVCNTSIMQLFTQGQQVRVFAQIYRDCTPMDVVDKVYVIPDGGCDSDVVSPSSYTGA 440
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCI 1154
++EP Y + VI +DFQSLYPS++I+ N C+ST +
Sbjct: 441 YVYEPVPGVYKN-VIPMDFQSLYPSIIISKNICYSTLV 477
>UniRef50_Q9DSV8 Cluster: DNA polymerase; n=1; Diadromus pulchellus
ascovirus 4a|Rep: DNA polymerase - Diadromus pulchellus
ascovirus 4a
Length = 956
Score = 78.2 bits (184), Expect = 2e-12
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 1193 PVGIGFVKTSVR-RGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANV 1251
P F+K V +GVLP ++V+ MK + D + ++ RQL K+ AN
Sbjct: 586 PNSFRFIKQEVYGKGVLPTIIQTLLDARKSVRAQMKNERDPNIIAILNQRQLSYKVSANS 645
Query: 1252 TYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVL-- 1309
YG T +G +P + +A V GR+++ +A +++ + ++YGDTDS ++
Sbjct: 646 MYGATGVR-AGALPFMPIAMCVTFTGRQSIIKASNIIK---SLGGTIVYGDTDSNYITFD 701
Query: 1310 -VPGRSRLEAFEI---GQQIADAVTADNPPPVALKLEK-VYQPCILQTKKRYVGFMFESP 1364
+ G + + +I + AD ++ P P+ ++ E+ +Y ++ TKKRY+ + +
Sbjct: 702 DISGDHKDKCEKIWTRALETADQISCHYPKPMKIEFEETIYYKFMILTKKRYMYYSCKRT 761
Query: 1365 DQEKPTYEAKGIETVRRD 1382
+ KG+ RRD
Sbjct: 762 GEISKKIGQKGVLLARRD 779
Score = 42.3 bits (95), Expect = 0.11
Identities = 61/284 (21%), Positives = 115/284 (40%), Gaps = 26/284 (9%)
Query: 897 VFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLS 956
V N + V +E + I KL+ P+I+ G+ I + +++ RA+ + + +
Sbjct: 252 VENATLTVVDSERDLIVAFAKLIQKEQPNIITGWNIFTFDFKFMINRADNMCMHEFTNFG 311
Query: 957 RITEKNR-------QKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVL 1009
+ E+ + K + Y + G + ++ + R + L SYS N L
Sbjct: 312 MVDEEGQITTVKWSSKAFSATNVQYVD-VEGVLCIDLIEVVRKDYKLDSYSLNNVSKHFL 370
Query: 1010 NERVPSYSY-----AQLSDWWCDESKMLRWIPVEYYLTKLSGTVR-MLQKLDIINRTSEL 1063
++ A +S ++ + +Y + S V + L SE+
Sbjct: 371 KNEKDDMNFQDIMKAIISHESGSADAANQFAKLGHYCVQDSRLVLDLFLHLQTWLSLSEM 430
Query: 1064 ARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAP----ETLPLIF 1119
++ V G Q + + +LR +++ S + + + P T+P ++
Sbjct: 431 SKTTSTPIMMVHLNGQQKKFYNQVLRYCWYNDILVESNAYQSKRPIVTPVHTCSTVPGLY 490
Query: 1120 EPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGE 1163
E Y V+ LDF SLYPS+MIAYN +ST + N+ E
Sbjct: 491 E-----Y---VVPLDFASLYPSIMIAYNLDYSTIVMPDSNVPEE 526
>UniRef50_Q0E5A0 Cluster: DNA polymerase; n=11; root|Rep: DNA
polymerase - Spodoptera frugiperda ascovirus 1a
Length = 1104
Score = 78.2 bits (184), Expect = 2e-12
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 6/182 (3%)
Query: 1204 RRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGR 1263
RRG+LP + V+ +MK D + + QL K+ AN YG T A+ +G+
Sbjct: 719 RRGILPDLVECLLQARKRVRGNMKSVTDPMARDILDKSQLAYKVTANSIYGSTGAS-NGK 777
Query: 1264 MPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPG--RSRLEAFEI 1321
+PC VA A GR T+ +AI++ R T N IY DTDSM+V + S + +
Sbjct: 778 LPCQNVAKVTTALGRMTILQAIEIAR--TERNVTTIYSDTDSMYVQLQDDPASNQDPWTY 835
Query: 1322 GQQIADAVTADNPPPVALKLE-KVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVR 1380
+++A +T+ P+ ++ E ++ + KK Y+G + + TVR
Sbjct: 836 VRELATHITSKLREPMVIEAEDDIHAKVLFLGKKCYIGRKLFRDGSVARDLDWHVVITVR 895
Query: 1381 RD 1382
RD
Sbjct: 896 RD 897
Score = 39.1 bits (87), Expect = 1.0
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 1040 YLTKLSGTVRMLQK-LDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIA 1098
++T L+ R+ + +++ + R+F L + E + + + L A P +A
Sbjct: 470 HITSLTEMARITNTPIVMVHYQKQQRRMFHLMFSECMRENVAMQ-DDFGLANAAPFETVA 528
Query: 1099 LSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCI 1154
+ KQ S A + +PE YS V LD ++YP++MIAYN C+ST +
Sbjct: 529 ATQK-KQLSYSGA-----YVKDPEPGLYS-MVGSLDVNNMYPTLMIAYNLCYSTVV 577
>UniRef50_A7U6F2 Cluster: Putative B family DNA polymerase I; n=1;
Pyramimonas orientalis virus|Rep: Putative B family DNA
polymerase I - Pyramimonas orientalis virus
Length = 1206
Score = 78.2 bits (184), Expect = 2e-12
Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 18/261 (6%)
Query: 1222 VKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETL 1281
+ S+ ND +K + QL K+ AN YG A S + E+A S A GR +
Sbjct: 828 ILSSVDTYND-FMKAILDGLQLAYKITANSLYGQVGARTSP-IYMKELAASTTATGRNLI 885
Query: 1282 ERAIKLVRENTTWNAKVIYGDTDSMFV---------LVPGRSRLEAFEIGQQIADAVTAD 1332
+A + + N + A V+YGDTDS+FV L+ + ++ +I + +DA +
Sbjct: 886 MKAKEFMETN--YGADVVYGDTDSIFVDFKVKEKYGLLDKDALQKSIDISVKASDAFKKE 943
Query: 1333 NPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLR 1392
P L+ EK + P I+ +KK+YVG ++E D K ++ GI RRD VK++
Sbjct: 944 LKAPHDLEYEKTFFPFIILSKKKYVGNLYEH-DVNKYKQKSMGIVLKRRDNANI-VKIVY 1001
Query: 1393 QSLCE-LFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEI 1451
+ + L ++S +K +L +L + +L T+ + Y+ +
Sbjct: 1002 GGIIDILLNRQNISFAINFLKESLRKLVNGEFHMDDLVITKTL--RTTYKDPTRIAHKVL 1059
Query: 1452 AKRIGMKDRRAIPRTGWRVSW 1472
A R+ +D + P++ RV +
Sbjct: 1060 ADRMRNRDPGSAPQSSDRVPY 1080
Score = 46.0 bits (104), Expect = 0.009
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Query: 893 LDGC--VFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLD 950
LD C + V VI E I E KL++ DPDIM GY I + Y+ +RA LG +
Sbjct: 392 LDTCNDIPGVDVITCKTETALIKEWCKLIHRVDPDIMTGYNIFGFDFDYIYKRALELGCE 451
Query: 951 -VLKDLSRIT-EKNRQKRWMKNESDYEGRII------GRVIFNVWRLFRHELALSSYSFE 1002
+ SR+ K++ K M S ++ GRV ++ ++ + E L SY +
Sbjct: 452 KYVLGCSRLEGHKSKFKEKMLASSALGENLLKYVEMEGRVFVDLMKVVQREYNLDSYKLD 511
Query: 1003 NCMYEVLNERVPSYSYAQL 1021
N ++ +V +++ L
Sbjct: 512 NVASHFISGKVKTHNKTTL 530
Score = 36.3 bits (80), Expect = 7.1
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 1050 MLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTM 1109
++ KL++ +A + + + RG ++ SL+ + R N I Q S
Sbjct: 615 LIIKLEVFANNMGMANVCLVPLSYIFMRGQGIKIFSLVAKQCRDDNFIIPLIKFDQDSEE 674
Query: 1110 RAPETLPLIFEPESRFYSD-PVIVLDFQSLYPSMMIAYN 1147
++ +P Y + P+ V+D+ SLYPS MI+ N
Sbjct: 675 VEGYEGAIVLDPIPGIYVEAPISVMDYASLYPSSMISEN 713
>UniRef50_P28040 Cluster: DNA polymerase alpha catalytic subunit; n=2;
Schizosaccharomyces pombe|Rep: DNA polymerase alpha
catalytic subunit - Schizosaccharomyces pombe (Fission
yeast)
Length = 1405
Score = 77.8 bits (183), Expect = 2e-12
Identities = 140/693 (20%), Positives = 269/693 (38%), Gaps = 51/693 (7%)
Query: 907 NEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKR 966
+E+ ++ + V +DPD+ G++ EM + +L R + + + R+ +
Sbjct: 601 SEVSLLNNFLNKVRTYDPDVYFGHDFEM-CYSVLLSRLKERKIHNWSSIGRLRRSEWPRS 659
Query: 967 WMKNESDY-EGRII-GRVIFNVWRLF-RHELALSSYSFENCMYEVLNERVPSYSYAQLSD 1023
+ ++ + E +II GR++ ++ F R + S+S + + L+ + + +
Sbjct: 660 FNRSSQQFVEKQIIAGRLMCDLSNDFGRSMIKAQSWSLSEIVLKELDIKRQDINQEKALQ 719
Query: 1024 WWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRV 1083
W D + L V + + K+ ++ + L + G W L+ R
Sbjct: 720 SWTDTAHGLLDYLVHCEIDTFF-IAAVAFKIQMLQLSKNLTNIAGNSWARTLTGTRAERN 778
Query: 1084 ESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMM 1143
E ++L + I KQ+S R E F E + + + +
Sbjct: 779 EYILLHEFKKNGYIVPD---KQQSIRRHAEA----FGAEDGLQEESLGKKKDKYKGGLVF 831
Query: 1144 IAYNYCFSTCIGRVQNING---ETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFVK 1200
+ TCI V + N E+ + RS + + I +P
Sbjct: 832 EPQKGLYETCI-LVMDFNSLYPSIIQEYNICFTTVDRSPSNS-DSDDQIPDTP------S 883
Query: 1201 TSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHS-RQLGLKLIANVTYG---YT 1256
S +G+ P + +K +K + ++ +Q LKL AN YG YT
Sbjct: 884 ASANQGIFPRLIANLVERRRQIKGLLKDNSATPTQRLQWDIQQQALKLTANSMYGCLGYT 943
Query: 1257 AANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRL 1316
+ F R +A + KGRE L +L + +VIYGDTDS+ + +
Sbjct: 944 KSRFYAR----PLAVLITYKGREALMNTKELADQ---MGLQVIYGDTDSVMLNTNVTDKN 996
Query: 1317 EAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGI 1376
A IG + + V + + + ++ VYQ +L KK+Y +S Q KP + KG+
Sbjct: 997 HALRIGNEFKEKVN-ERYSKLEIDIDNVYQRMLLHAKKKYAALQLDS--QGKPNLDVKGL 1053
Query: 1377 ETVRRDGCPAGVKLLRQSLCELFTHGDM--SVVKRLVKATL---SRLAETSLPVHE-LFF 1430
+ RR+ C + + L ++ + G++ +V++ + + ++ P ++ + F
Sbjct: 1054 DMKRREFCTLAKEASKFCLDQILS-GELTETVIENIHSYLMDFSEKMRNGKFPANKFIIF 1112
Query: 1431 TREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVT-CGAPGVPLVRLART 1489
R Y G + P ++A + K R R G + +++ A G P R A +
Sbjct: 1113 NRLGKNPEDYPNGKTMPFVQVA--LKKKARGENVRVGDVIPFIIAGSDADGHPADR-AYS 1169
Query: 1490 PQEL--TRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWNELGYN-RTAQQREQTQ 1546
PQE+ T + + Y + ++ G + + LG + R E ++
Sbjct: 1170 PQEIMNTNSTLVIDYNYYLSHQILPPIERVIAPIEGTNRARLAECLGLDARKYYSHETSE 1229
Query: 1547 SGGIEKYMSRERCAVCGVRTIVRSAVCPQCAHT 1579
S ++Y S C + CP C T
Sbjct: 1230 SSAFQRYESTLTDDQCFINVSPLLLKCPSCNAT 1262
>UniRef50_UPI0000499846 Cluster: DNA polymerase alpha catalytic
subunit; n=1; Entamoeba histolytica HM-1:IMSS|Rep: DNA
polymerase alpha catalytic subunit - Entamoeba
histolytica HM-1:IMSS
Length = 1132
Score = 77.4 bits (182), Expect = 3e-12
Identities = 54/219 (24%), Positives = 111/219 (50%), Gaps = 14/219 (6%)
Query: 1220 QAVKKSMKMQNDEAVKKA-MHSRQLGLKLIANVTYGYTAANFSG-RMPCVEVADSVVAKG 1277
Q V + ++ + + +KKA ++++QL +K++ N YG F G R C ++A+ + +KG
Sbjct: 662 QIVSEMERLGDKDEIKKAQLNTQQLSVKVMTNSIYG--CLGFKGSRFYCQKIAEWITSKG 719
Query: 1278 RETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPV 1337
R L + V++ + +VIYGDTDS+ V P S + G + + + +
Sbjct: 720 RTILTNTCEQVQK---MDIQVIYGDTDSLMVRPPKISMNDLKTFGNNLCAQIN-KSYKSL 775
Query: 1338 ALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCE 1397
++++ +++ +L KKRY M D K E KG++ VRR+ CP ++ +
Sbjct: 776 EIEIDAIFEKLLLLRKKRYAATMI--LDGGKKKKELKGLDVVRREWCPLSKEIGYYCIDL 833
Query: 1398 LFTHGDMSVVKRLVKATLSRLAET----SLPVHELFFTR 1432
+ + + ++++++ +AE + +H+L T+
Sbjct: 834 ILSDPGLVKMQQILEIYFKNMAEKLRSGKVDIHQLVITK 872
Score = 56.4 bits (130), Expect = 6e-06
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 1048 VRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIK-QR 1106
+++ +++ I T EL L G W RVE L+L + + P K
Sbjct: 532 IKLCNQMNAIAMTKELTNLAGNIWSHSFFGKRAERVEYLLLHEFIKQTTLYILPDKKFGE 591
Query: 1107 STMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCF 1150
+ L+ EP FYSDP++++DF+SLYPS+++ + CF
Sbjct: 592 GSQHKKYAGGLVLEPVKDFYSDPILLIDFKSLYPSIIMEFGVCF 635
>UniRef50_Q677R2 Cluster: DNA polymerase; n=3; Lymphocystivirus|Rep:
DNA polymerase - Lymphocystis disease virus - isolate
China
Length = 935
Score = 77.0 bits (181), Expect = 4e-12
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 7/191 (3%)
Query: 1198 FVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTA 1257
F+K+ ++GV+P + VK + D +K + RQL K+ AN YG
Sbjct: 553 FIKSIHKKGVVPAIVADLLEYRKRVKVQIAETTDSTLKIVLDKRQLACKISANSIYGSMG 612
Query: 1258 ANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLE 1317
+ G +P + A + GR ++E+A ++ + + ++YGDTDS +V L
Sbjct: 613 VS-KGYLPFMPGAMCITRVGRLSIEKAAAVI--ESKYGGALVYGDTDSNYVQFKDVPDLT 669
Query: 1318 A-FEIGQQIADAVTADNPPPVALKLEK-VYQPCILQTKKRYVGFMFESPDQEKPTYEAKG 1375
A + +++AD V+ + P P+ L+ E VY ++ +KKRY+ +KG
Sbjct: 670 ALWNKAEEVADNVSKEFPMPMKLEFENVVYVKFLILSKKRYMYVSCNKSGCVDSKLSSKG 729
Query: 1376 IETVRRD--GC 1384
+ RRD GC
Sbjct: 730 VLLARRDNAGC 740
Score = 56.8 bits (131), Expect = 5e-06
Identities = 54/261 (20%), Positives = 112/261 (42%), Gaps = 16/261 (6%)
Query: 899 NVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEI-LGLDVLKDLSR 957
++ V+ + E ++ +IK++ +PD + GY I Y+L+R L ++ K +S+
Sbjct: 211 DIKVLQYNTEKNLLEGLIKVITNLNPDALVGYNILKFDIDYILKRCRRWLVVESFKSISK 270
Query: 958 ITEKNRQKR--WMKNESDYEGRII----GRVIFNVWRLFRHELALSSYSFENCMYEVLNE 1011
+ R+K W + + G ++ ++ + + L +Y E LN
Sbjct: 271 YYKPAREKTISWSSAAFKCQEYVFVDWEGIIVLDLLPIVERDYKLDNYKLETVANHFLNS 330
Query: 1012 RVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQW 1071
++ + + + + + Y + +++ L++ +ELA++ +
Sbjct: 331 GKDPITFKDI--FKAHNTGYMAEVG-NYCIKDADLCLKLTDILNLWIGLTELAKICNVDI 387
Query: 1072 WEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVI 1131
+ +RG Q RV S + N++ + A + +P Y + V+
Sbjct: 388 MSLYARGQQIRVYSQLYAYCSQNNIVVGRLKAGDEQYVGA-----YVVDPVPGLYEN-VV 441
Query: 1132 VLDFQSLYPSMMIAYNYCFST 1152
LDF SLYPS++IA N C+ST
Sbjct: 442 PLDFSSLYPSIIIAKNICYST 462
>UniRef50_Q55RB8 Cluster: DNA polymerase; n=2; Filobasidiella
neoformans|Rep: DNA polymerase - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 1494
Score = 77.0 bits (181), Expect = 4e-12
Identities = 135/586 (23%), Positives = 222/586 (37%), Gaps = 74/586 (12%)
Query: 905 VSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQ 964
V E ++ ++ ++ HDPD++ G+ + +L R + L D + R K
Sbjct: 653 VKTERALLNSMLGMIYRHDPDVIVGHNFLGGGFEALLYRMKELKADHWSRIGRFRRKGMN 712
Query: 965 KRWM-KNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSD 1023
M N GR++ + + + S N +V E + A D
Sbjct: 713 VSKMGSNVKLMAGRLVADLSSDAAKGMISSTTWSLTEMTNTHLKVQREDIDPEDTAGYFD 772
Query: 1024 WWCDES----KMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGS 1079
K +R V+ + + + ++ I+ T +L L G W L+ G
Sbjct: 773 HTATSPDRLIKFIRLCEVDAFFQ-----MAIAARVQILPLTKQLTNLAGNSWNLTLNGGR 827
Query: 1080 QFRVESLMLRAARPLNLIALSPT---IKQRSTMRAPETLP-----------------LIF 1119
R E ++L L + K R T E L+F
Sbjct: 828 AVRNEFILLHEFHRLEYVCPDKAPYKAKTRPTGDDDEVTEDIIAMKGQRGKAKYAGGLVF 887
Query: 1120 EPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSK 1179
EP+ + +I++DF SLYPS++ YN F+T V+ + E A E +IP
Sbjct: 888 EPKRGLWDKYIIIMDFNSLYPSIIQEYNIDFTT----VERDDDENAEE-----EKIPD-- 936
Query: 1180 LEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMH 1239
V +S + P G+ LP + VK MK ++ K +
Sbjct: 937 ----VPSSDV---PQGV-----------LPRIIATLVNRRRQVKALMKDKSATPAKLLQY 978
Query: 1240 S-RQLGLKLIANVTYGYTAANFSG-RMPCVEVADSVVAKGRETLERAIKLVRENTTWNAK 1297
+Q LKL AN YG F+G R +A KGRE L +L +
Sbjct: 979 DIKQQALKLTANSMYG--CLGFAGSRFSSRPLAALTTFKGREILTHTRELAE---SLQLD 1033
Query: 1298 VIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYV 1357
V+YGDTDS+FV + EA +I + V + + + L+ V++ +L KK+Y
Sbjct: 1034 VVYGDTDSVFVNSNVTTYPEALKIANEFKKLVN-ERYKLLEIDLDAVFERILLLNKKKYA 1092
Query: 1358 GFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSR 1417
+ E+ T E KG++ RR+ L E+ + VV + L++
Sbjct: 1093 AVKIDEAG-ERST-EVKGLDMKRREFSKVSKDASAAILKEILSGEATEVVVEKIHELLTK 1150
Query: 1418 LAE----TSLPVHE-LFFTREYHGQAGYRPGASAPPNEIAKRIGMK 1458
L E +P+ + + F R Y S P ++A R+ K
Sbjct: 1151 LGEAVRNNEIPIDDYIIFKRLGKNPEDYPDKKSQPHVQVALRMKQK 1196
>UniRef50_Q74N74 Cluster: DNA polymerase; n=1; Nanoarchaeum
equitans|Rep: DNA polymerase - Nanoarchaeum equitans
Length = 676
Score = 77.0 bits (181), Expect = 4e-12
Identities = 95/407 (23%), Positives = 171/407 (42%), Gaps = 47/407 (11%)
Query: 901 PVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITE 960
P I V+ E E I++ ++++ PDI+ Y + ++++RA + + + L E
Sbjct: 216 PTIKVNTEYELIEKFVEIIESLKPDIIVTYNGDNFDIDFLVKRASLYNIRLPIKLVNKKE 275
Query: 961 KNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYA- 1019
R + Y+ + +++ +L+ +YS E+L E Y Y
Sbjct: 276 PTYNFRESAHVDLYK---------TITTIYKTQLSTQTYSLNEVAKEILGEE-KIYDYEN 325
Query: 1020 QLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGS 1079
L DW + EY L T ++ + + N ELARL ++V
Sbjct: 326 MLYDWAIGNYNKV----FEYNLKDAELTYKLFKYYE--NDLLELARLVNQPLFDVSRFSY 379
Query: 1080 QFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETL--PLIFEPESRFYSDPVIVLDFQS 1137
VE +++ +R N I + + R T ++EP+ Y + + VLDF S
Sbjct: 380 SNIVEWYLIKKSRKYNEIVPNKPKMEEVERRKLNTYAGAFVYEPKPGLYEN-LAVLDFAS 438
Query: 1138 LYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIG 1197
LYPS+++ + N++ T Y ++ +EA++ N + +
Sbjct: 439 LYPSIILEH------------NVSPGTIY---CEHDDCKQNGVEAIINNEKKY-----VW 478
Query: 1198 FVKTSVRRGVLPXXXXXXXXXXQAVKKSMK-MQNDEAVKKAMHSRQLGLKLIANVTYGYT 1256
F K +G +P +K+ +K + D K ++++Q LK+I N TYGY
Sbjct: 479 FCKKV--KGFIPTVLEHLYTKRLELKRKLKELDRDSEEYKIINAKQAVLKIIINATYGYM 536
Query: 1257 AANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDT 1303
+ R C++ A +V A GR+ + +K E KVIYGD+
Sbjct: 537 GFP-NARWYCIDCAAAVAAWGRKYINYILKRAEEE---GFKVIYGDS 579
>UniRef50_Q0W0J7 Cluster: DNA-directed DNA polymerase B; n=1;
uncultured methanogenic archaeon RC-I|Rep: DNA-directed
DNA polymerase B - Uncultured methanogenic archaeon RC-I
Length = 798
Score = 77.0 bits (181), Expect = 4e-12
Identities = 128/568 (22%), Positives = 237/568 (41%), Gaps = 75/568 (13%)
Query: 907 NEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEI--LGLDVLKDLSRITEKNRQ 964
N+ + I + I ++ +DPDI+ GY + W Y++ERA+ + L+V +D S T + +
Sbjct: 210 NDKQIIKDFIAFIDEYDPDIIVGYNQDSFDWPYIIERAKRHKIKLNVSRDGS--TPLHGR 267
Query: 965 KRWMKNESDYEGRIIGRVIFNVWRLFRHEL-ALSSYSFENCMYEV----LNERVPSYSYA 1019
K ++IGR+ +++++ ++ + + +N V +ERV + S
Sbjct: 268 GGLQKKV-----KLIGRLNVDLYQVAARDVDGVKIKTLDNIADYVGVMKKDERV-NLSGV 321
Query: 1020 QLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGS 1079
++ +W D + R + Y + T + ++L + E R+ V G
Sbjct: 322 EIYQYWLDPER--RKDLIAYSRDDVVSTYGLAKEL--LPLQYEFTRMIHEPLDNVSKMGR 377
Query: 1080 QFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLY 1139
+VE+ + A + I R+ +FEP + + V LDF ++Y
Sbjct: 378 GRQVEAYLAYIAYEHGEL-----IPSRAGEVETYAGGFVFEPVKGLHKN-VAALDFSAMY 431
Query: 1140 PSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIHWSPVGIGFV 1199
PS+MIAYN I+ +T E G P ++ K P G
Sbjct: 432 PSIMIAYN------------ISPDTVCEAGDQDCSEPAPEVGYRFKKQ-----PEGFF-- 472
Query: 1200 KTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAAN 1259
T++ + ++ Q +KS + + + RQ +K++ N YGYT
Sbjct: 473 -TTILKNLVTHRSTLKKRLAQLDRKSNEY-------RMLDLRQKSIKILTNAFYGYTGWA 524
Query: 1260 FSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAF 1319
+ E A++ A GR +++A + E +V+YGDTDS+FV + RL
Sbjct: 525 -QAKWYRRECAEATSAWGRYFIKKANDIAIE---MGLQVLYGDTDSLFVEMEDNKRL--M 578
Query: 1320 EIGQQIADAVTADNPPPVALKLEKVYQPCIL-QTKKRYVGFMFESPDQEKPTYEAKGIET 1378
++ +Q V A+ P+ + ++ VY+ ++KKRY G ++ +G+E
Sbjct: 579 DVVRQYIQRVKAE--LPLDMDIDNVYRIIFFTESKKRYAGL------TDRGEIVVRGLEV 630
Query: 1379 VRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFF-------- 1430
R D C +L + + + + + VK T+ ++ +P+ L
Sbjct: 631 RRGDWCEIAKELQSEVIRIILEEENPDKAAKFVKDTVQKVKSGKVPLDALVIHKTLTKSV 690
Query: 1431 TREYHGQAGYRPGASAPPNEIAKRIGMK 1458
TR QA + A ++A IG K
Sbjct: 691 TRYESAQAHVKAAERAMERDMAAEIGNK 718
>UniRef50_Q16ZB1 Cluster: DNA polymerase; n=2; Culicidae|Rep: DNA
polymerase - Aedes aegypti (Yellowfever mosquito)
Length = 1508
Score = 76.6 bits (180), Expect = 5e-12
Identities = 143/630 (22%), Positives = 248/630 (39%), Gaps = 50/630 (7%)
Query: 899 NVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERA--EILGLDVLKDLS 956
N V NE ++ + L DPD++ +++ +G+ LE ++ L + S
Sbjct: 630 NTKVTKCENERTLLNWFLSLYGTFDPDLVVTHDV----YGFQLELLCQRMMALKI-PQWS 684
Query: 957 RITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSY 1016
RI + K D+ ++GR+I +V + SY EVL +
Sbjct: 685 RICRLKMKLPSSKRVDDF---LVGRMICDVKTSAEELIKSRSYDLNTLCMEVLKIQDGER 741
Query: 1017 SYAQLSD--WWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEV 1074
L D + + L+ + + + T+R++ +L+++ ++ ++ G
Sbjct: 742 KDVLLDDIPGMYENTADLKQL-IGLTMQDNFYTMRLMCELNVLPLALQITQIAGNLMNRT 800
Query: 1075 LSRGSQFRVESLMLRAARPLNLIA--LSPTIKQRSTMRAPETLPLIFEPESRF-YSDPVI 1131
L G R E L+L A + I +P T PE +P+S+ YS ++
Sbjct: 801 LHGGRAERNEYLLLHAFTEKDFIVPDKAPRAGPGFTQDGPELATERRKPKSKAAYSGGLV 860
Query: 1132 VLDFQSLYPS--MMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLI 1189
+ + Y +++ +N + + I + NI T +P E +
Sbjct: 861 LDPIKGFYDKFILLMDFNSLYPSII-QEYNICFTTV---------LPPPPSEG--GDDSE 908
Query: 1190 HWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHS-RQLGLKLI 1248
+PV + + G+LP +AVK+ MK E K ++ RQ+ LKL
Sbjct: 909 DANPV----ILETDEMGILPRQIRKLVESRRAVKQLMKASGLEPELKMQYNIRQMALKLT 964
Query: 1249 ANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFV 1308
AN YG S R +A + KGRE L +V + N +VIYGDTDS+ +
Sbjct: 965 ANSLYGCLGYTRS-RFYAQHMAALITQKGREILMNTKSIVEK---MNYQVIYGDTDSIMI 1020
Query: 1309 LVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGF-MFESPDQE 1367
E F+IG I V + L ++ +Y+ +L KK+Y + + D+
Sbjct: 1021 NTNSIDYDEVFKIGANIKQIVN-KTYKCLELDVDGIYKYLLLLKKKKYAAVSIAKVGDEI 1079
Query: 1368 KPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLP--- 1424
K T E KG++ VRRD V + E+ + M + L +L + L
Sbjct: 1080 KCTQELKGLDIVRRDWSKLAVIAGNFVISEILSDKPMDDRIENIHTKLEKLRDDLLNGVT 1139
Query: 1425 -VHELFFTREYHGQAG-YRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVP 1482
L T++ Y A P +A R+ + R R G V +++
Sbjct: 1140 YPSLLEITKQLTRSLNEYSDAAQLPHVTVAMRMNKQRNRNFKR-GDVVGYIICDDGTSAA 1198
Query: 1483 LVRLARTPQEL---TRDRSLRPHVAYYATR 1509
++ A EL L+P V YY ++
Sbjct: 1199 AMKRAYHIDELKDPANKDKLKPDVEYYLSQ 1228
>UniRef50_A7PLB6 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1495
Score = 76.2 bits (179), Expect = 7e-12
Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 16/316 (5%)
Query: 1192 SPVG-IGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIAN 1250
SP G + + +S GVLP + VK +K + V++ + +Q LKL AN
Sbjct: 913 SPDGSVPRLPSSKTTGVLPELLKKLVERRKTVKSRLKTASGLKVQQ-LDIQQQALKLTAN 971
Query: 1251 VTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLV 1310
YG + S R +A+ + +GRE L+ + LV+ N N +VIYGDTDS+ +
Sbjct: 972 SMYGCLGFSNS-RFYAKPLAELITLQGREILQSTVDLVQNNL--NLEVIYGDTDSIMIYT 1028
Query: 1311 PGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPD-QEKP 1369
+A I ++ V + + L+ +Y+ +L KK+Y + D
Sbjct: 1029 GLDDITKAKAIAGKVIQEVN-KKYRCLEIDLDGLYKRMLLLKKKKYAAVKLQFKDGTPYE 1087
Query: 1370 TYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAET----SLPV 1425
E KG++ VRRD +L SL ++ + G V + +L ++ E + +
Sbjct: 1088 VIERKGLDMVRRDWSLLSKELGDFSLSQILSGGSCEDVVESIHNSLMKVQEDMRNGEVAL 1147
Query: 1426 HELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTC-----GAPG 1480
+ T+ P + P ++A R+ G V +++ C
Sbjct: 1148 EKYIITKSLTKPPEAYPDKNQPHVQVALRLKQSGYSTGCSAGDTVPYIICCEQGTSSGSS 1207
Query: 1481 VPLVRLARTPQELTRD 1496
+ + AR P EL RD
Sbjct: 1208 TGIAQRARHPDELKRD 1223
Score = 49.2 bits (112), Expect = 0.001
Identities = 60/252 (23%), Positives = 101/252 (40%), Gaps = 24/252 (9%)
Query: 923 DPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYEGR----- 977
D D++ G+ I +L RAE + + + R+ + K + G
Sbjct: 660 DSDVLVGHNISGFDLDVLLHRAEACKVPMWSKIGRLKRRVMPKLTRGSTIFGSGASPGIM 719
Query: 978 --IIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWI 1035
I GR++ + + R L SYS LN+ + +S + +++ I
Sbjct: 720 SCIAGRLLCDTYLCSRDLLKEVSYSLTQLAKTQLNKDRKEIAPQDVSRMFQTSESLVQLI 779
Query: 1036 PVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLN 1095
EY T ++ ++ L ++ T L + G W + L RVE L+L
Sbjct: 780 --EYGETDAWLSMELMFHLSVLPLTRLLTNISGNLWGKTLQGARAQRVEYLLLHEFHAKK 837
Query: 1096 LIA-------LSPT--IKQRSTM-----RAPE-TLPLIFEPESRFYSDPVIVLDFQSLYP 1140
I L T K+R + P + L+ EP+ Y +++LDF SLYP
Sbjct: 838 YIVPDKISSHLRETKWTKRRMNQGGKGKKGPAYSGGLVLEPKRGLYDKYILLLDFNSLYP 897
Query: 1141 SMMIAYNYCFST 1152
S++ YN CF+T
Sbjct: 898 SIIQEYNICFTT 909
>UniRef50_A0DPB2 Cluster: DNA polymerase; n=1; Paramecium
tetraurelia|Rep: DNA polymerase - Paramecium tetraurelia
Length = 725
Score = 76.2 bits (179), Expect = 7e-12
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 23/267 (8%)
Query: 902 VIYVS-NEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITE 960
+IY S NEI+ + + + DPD++ GY + +++R+ LGL+ + L+
Sbjct: 308 IIYQSENEIDLLKQFNQFFLSFDPDVITGYNLHDELLPLIIQRSRTLGLNC-QYLNYGRS 366
Query: 961 KNRQK-----RWMKNESDY-EGRII---GRVIFNVWRLFRHELALSSYSFENCMYEVLNE 1011
KN + R+ E + + GR+ + + +S YS + Y + N
Sbjct: 367 KNEESLISNGRFFSTVMRMRETKFVETNGRIQLDTLICMLRDTKISQYSLGSIYYSLFNR 426
Query: 1012 RVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQW 1071
++ Y + + E ++ I Y L K + +L I +E++++ G+
Sbjct: 427 QIEIYDQETIFQLY--EQNNIKRIST-YSLRKSEACLEILLYKGWIYTYAEISKVTGVPI 483
Query: 1072 WEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETL----PLIFEPESRFYS 1127
++ RG +V S +LR + + + + + P+T L+ EP+ FY
Sbjct: 484 DYIIQRGQSIKVLSQLLRQTKKNEYL-----VPDENHLVKPDTSNLKGALVLEPKKGFYK 538
Query: 1128 DPVIVLDFQSLYPSMMIAYNYCFSTCI 1154
P+ + DF SLYPS++IAYN C++T I
Sbjct: 539 IPLALFDFVSLYPSIIIAYNMCYTTII 565
Score = 45.2 bits (102), Expect = 0.015
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 26 LRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNIAMKQA-TSS 84
+R+FG + I FPYFYIP P++ I L + N K +
Sbjct: 77 IRLFGITDQQQSLEIKIIDYFPYFYIPFPSKLVRDD--KDIDYFLHQFNNHLYKNGIIAE 134
Query: 85 NQHVYKISLVKG---LPFYGYHDKEHLYLKVFLYRPGLIKQAVELFSSGAIL-GQTF--Q 138
+Q + +I++V+ + G + ++ +LK+ Y +K+ +L G L G F Q
Sbjct: 135 SQPIREITVVESEIIRNYKGQNYQKEPFLKLSFYNVSSMKKVAQLIEKGLNLNGFQFAKQ 194
Query: 139 PHESHLNFTLQFFIDFNLFGM 159
+E + + L+F ID NL GM
Sbjct: 195 TYECRITYPLKFMIDLNLRGM 215
>UniRef50_UPI0000D56089 Cluster: PREDICTED: similar to CG6349-PA; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to CG6349-PA
- Tribolium castaneum
Length = 1406
Score = 75.4 bits (177), Expect = 1e-11
Identities = 83/309 (26%), Positives = 128/309 (41%), Gaps = 15/309 (4%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHS-RQLGLKLIANVTYGYTAANFSGRM 1264
GVLP +AVKK MK + ++ + RQ+ LKL AN YG S R
Sbjct: 853 GVLPTEIKKLVESRRAVKKLMKSADLSPDQRMQYDIRQMALKLTANSMYGCLGFANS-RF 911
Query: 1265 PCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQ 1324
+A + KGRE L ++V N +VIYGDTDS+ + + +IG +
Sbjct: 912 YAKNLAALITHKGREILTNTKEVVER---LNFEVIYGDTDSLMINTNLVDFDQVAQIGTK 968
Query: 1325 IADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQE---KPTYEAKGIETVRR 1381
I + V L ++ V++ +L KK+Y S D+E K E KG++ VRR
Sbjct: 969 IKQEIN-KLYRQVELDIDGVFKYLLLLKKKKYAAVTL-SKDKEGRLKTDIEYKGLDIVRR 1026
Query: 1382 D----GCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQ 1437
D AG +L Q L + + + + L E +P+ L T++
Sbjct: 1027 DWSRLAAEAGKFVLNQILSDQSSENRFLNILTHLSQLREDLQEGKVPLSLLVITKQLSKN 1086
Query: 1438 AGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDR 1497
P + P+ + I + R G V +L+ P + A +EL
Sbjct: 1087 PDQYPEDNTLPH-VQVAIRYNKQGGHYRAGDTVPYLICDDGTKNPATQRAYHIEELKNSE 1145
Query: 1498 SLRPHVAYY 1506
+L+ V YY
Sbjct: 1146 TLKIDVTYY 1154
Score = 52.4 bits (120), Expect = 1e-04
Identities = 50/239 (20%), Positives = 105/239 (43%), Gaps = 16/239 (6%)
Query: 923 DPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYEGRIIGRV 982
D DI+ G++++ + + ER + L RI + + ++ E +GR+
Sbjct: 602 DSDIVVGHDLQGHQISVLAERMFRHKIPNFSKLGRIKKSTFSRHKIEKEL-----FVGRL 656
Query: 983 IFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSD---WWCDESKMLRWIPVEY 1039
+ +V + + SY + VL + + + D + + ++L+ + +
Sbjct: 657 VCDVKTAAKELIRCRSYDLGSLCQAVLKIKDEQRTDLEPDDVLKMFRSKEELLKLVSLTM 716
Query: 1040 YLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIAL 1099
T ++++ L+II ++ + G + L G R E L+L A N I
Sbjct: 717 QDTAF--VLKIMYSLNIIPLALQITTIAGNVMSKTLMGGRSERNEFLLLHAFSEKNYIVP 774
Query: 1100 SPTIKQR------STMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFST 1152
+ ++ + +A + L+ +P+ FY ++++DF SLYPS++ YN CF+T
Sbjct: 775 DKSSGKKDFGEKTANKKATYSGGLVLDPKIGFYDKFILLMDFNSLYPSIIQEYNICFTT 833
>UniRef50_Q9TX75 Cluster: DNA polymerase alpha, DNAPOL alpha; n=10;
Plasmodium|Rep: DNA polymerase alpha, DNAPOL alpha -
Plasmodium falciparum
Length = 1855
Score = 75.4 bits (177), Expect = 1e-11
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMP 1265
G+LP +KK + + ++ K+ + + L +KLI+N YG N + R
Sbjct: 1150 GILPCILKSLVEKRSVIKKLISNEKNKEKKELLLIQSLSIKLISNSIYG-CLGNTNNRFY 1208
Query: 1266 CVEVADSVVAKGRETLERA-IKLVRENTTWNAKVIYGDTDSMFVLVPGRSR-----LEAF 1319
+A + +KGR L+ K+ +E +N KVIYGDTDS+ + ++ E+F
Sbjct: 1209 AKHLASYITSKGRNLLQHTKFKVEKE---FNLKVIYGDTDSIMIDTGIKANNINNYKESF 1265
Query: 1320 EIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETV 1379
++ I +++ N + L LE ++ +L KK+Y + EK YE KGI +
Sbjct: 1266 KLAHLIKNSINK-NYKKLELDLECIFSKLLLLKKKKYACAKVIDNNLEKYEYEMKGINFI 1324
Query: 1380 RRDGCPAGVKLLRQSLCELFTHGDM 1404
+RD + + L +FT+ D+
Sbjct: 1325 KRDFSKISKLIGNEVLRIIFTNRDV 1349
Score = 58.8 bits (136), Expect = 1e-06
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 1044 LSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTI 1103
++ TV + L II +T +L +L G W L + RVE +L I +P I
Sbjct: 949 INETVNVCNILQIIEKTRDLTKLSGYIWMRSLLCYTSERVEFFLLHEYNKKKFI--TPLI 1006
Query: 1104 KQRST------MRAPETLP----LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFST 1152
K+R+ M+ T L+ +P +Y V+ LDF SLYPS++I YN CFST
Sbjct: 1007 KKRTKKIETNQMKNKNTAKYLGGLVLDPLCGYYDTFVLYLDFNSLYPSIIIEYNVCFST 1065
>UniRef50_A5DZ55 Cluster: DNA polymerase; n=5; Saccharomycetales|Rep:
DNA polymerase - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 1529
Score = 74.1 bits (174), Expect = 3e-11
Identities = 74/314 (23%), Positives = 137/314 (43%), Gaps = 20/314 (6%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHS-RQLGLKLIANVTYGYTAANFSGRM 1264
GVLP + VKK +K + + A + +Q LKL AN YG + R
Sbjct: 961 GVLPRLLNTLVTRRREVKKLLKDPKNTPFQNAQYDIKQQALKLTANSMYG-CLGYVNSRF 1019
Query: 1265 PCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQ 1324
+A V KGRE L +L N+ +V+YGDTDS+ + + +A ++G+Q
Sbjct: 1020 YAKPLAMLVTNKGREILMDTRQLAESNSL---RVVYGDTDSVMIDTGADNLRDAVKVGEQ 1076
Query: 1325 IADAVTADNPPPVALKLEKVYQPCILQTKKRYVGF---MFESPDQEKPTYEAKGIETVRR 1381
V + + + ++ V++ +L KK+Y + ++ +E T E KG++ RR
Sbjct: 1077 FKVQVN-ERYRLLEIDIDNVFRRLLLHAKKKYAAMNASINKATGEEVTTLEVKGLDMRRR 1135
Query: 1382 DGCPAGVKLLRQSLCELFTHGD-----MSVVKRLVKATLSRLAETSLPVHELFFTREYHG 1436
+ C ++ L ++ ++ D M V + L + +A + T+
Sbjct: 1136 EYCQLSKEISTFVLMKILSNADPEEALMDVYQYLEEMRDKIIANQVPAIKYKINTKLSKD 1195
Query: 1437 QAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGA---PGVPLVRLARTPQE- 1492
Y G + P ++A + +K++ + + G +++++T + AR Q+
Sbjct: 1196 PTSYPNGKNMPQVQVA--LKLKNQGKVIKAGSVITYVITAPTAENDTSSVADRARAIQDL 1253
Query: 1493 LTRDRSLRPHVAYY 1506
L + LRP YY
Sbjct: 1254 LVQKTELRPDPTYY 1267
Score = 47.6 bits (108), Expect = 0.003
Identities = 60/279 (21%), Positives = 115/279 (41%), Gaps = 35/279 (12%)
Query: 907 NEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKR 966
NE ++ V V + DPD+ G+ +E S ++ R + L R K +
Sbjct: 658 NEKVLLNAVAAKVKMLDPDVFVGHRMENISLDVLVHRMYDNQVMTWSALGRRNRKQWPQH 717
Query: 967 WMKNE--SDYEGRII------GRVIFNVWRLFRHELALSSYSFENC-MYEVL--NERVPS 1015
KN+ S + ++ GR++ ++ L S++ MYEV+ + P
Sbjct: 718 ITKNKNSSGFNNNLLIREVFQGRLMCDIANEMGQSLTSKCQSWDLAEMYEVVCHKKHEPM 777
Query: 1016 YSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVL 1075
Q S + D + + + + K++ + + I++ + +L + G W L
Sbjct: 778 DISFQNSKFAEDATLLFLALKENNFNAKITSEIAF--SIQILSLSKQLTNIAGNAWSHTL 835
Query: 1076 SRGSQFRVESLMLRAARPLNLI---------------------ALSPTIKQRSTMRAPET 1114
S R E ++L R N I + ++ ++ + P+
Sbjct: 836 SGTRAGRNEYILLHEFRKNNYIVPDKEDALHKNTSYLQQAKLESFDDDVQTATSNKKPKF 895
Query: 1115 LP-LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFST 1152
L+FEPE + + ++V+DF SLYPS++ +N CF+T
Sbjct: 896 QGGLVFEPEKGLHKNYILVMDFNSLYPSIIQEFNICFTT 934
>UniRef50_Q8V1Z2 Cluster: DNA-directed DNA polymerase; n=13; root|Rep:
DNA-directed DNA polymerase - Emiliania huxleyi virus 163
Length = 172
Score = 73.7 bits (173), Expect = 4e-11
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGR-VQNINGETAYEFGAWRLRIP 1176
+ + +S FY+DPV LDF SLYPS+M+A+N C+ST + + ++G E+ ++
Sbjct: 5 VLDAKSGFYTDPVATLDFASLYPSIMLAHNLCYSTFVEKGTPRVDG---VEYETHKISPT 61
Query: 1177 RSKLEAL-VKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVK 1235
AL V L H +G K + KK M K
Sbjct: 62 EEYTFALNVPGVLTHMLKYLLGARKKA--------------------KKQMAAAKTPEEK 101
Query: 1236 KAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRE-NTTW 1294
++RQL LK+ N YG+ A G+ P +A GR+ + + ++ E W
Sbjct: 102 AIYNARQLALKISCNSIYGFCGAEKLGKYPLGAIAKCTTFNGRKMINKTSEMAIELFKPW 161
Query: 1295 NAKVIYGDTDS 1305
A++IYGDTD+
Sbjct: 162 IAEIIYGDTDT 172
>UniRef50_P26019 Cluster: DNA polymerase alpha catalytic subunit; n=2;
Sophophora|Rep: DNA polymerase alpha catalytic subunit -
Drosophila melanogaster (Fruit fly)
Length = 1488
Score = 73.3 bits (172), Expect = 5e-11
Identities = 79/311 (25%), Positives = 133/311 (42%), Gaps = 16/311 (5%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQN-DEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRM 1264
G+LP + VKK M + ++ H RQ+ LKL AN YG S R
Sbjct: 919 GILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLTANSMYGCLGFAHS-RF 977
Query: 1265 PCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQ 1324
+A V KGRE L +LV++ N V+YGDTDS+ + + ++IG
Sbjct: 978 FAQHLAALVTHKGREILTNTQQLVQK---MNYDVVYGDTDSLMINTNITDYDQVYKIGHN 1034
Query: 1325 IADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMF--ESPDQEKPTYEAKGIETVRRD 1382
I +V + L ++ V+ +L KK+Y +S + E KG++ VRRD
Sbjct: 1035 IKQSVN-KLYKQLELDIDGVFGCLLLLKKKKYAAIKLSKDSKGNLRREQEHKGLDIVRRD 1093
Query: 1383 GCPAGVKLLRQSLCELFTHGDMSVVKRLVKATL----SRLAETSLPVHELFFTREY-HGQ 1437
V + + L E+ + + V A L +++AE +P+ T++
Sbjct: 1094 WSQLAVMVGKAVLDEVLSEKPLEEKLDAVHAQLEKIKTQIAEGVVPLPLFVITKQLTRTP 1153
Query: 1438 AGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTC-GAPGVPLVRLARTPQ-ELTR 1495
Y AS P ++A R+ ++R + G V +++ G + R + + +
Sbjct: 1154 QEYANSASLPHVQVALRMN-RERNRRYKKGDMVDYVICLDGTTNAAMQRAYHLDELKTSE 1212
Query: 1496 DRSLRPHVAYY 1506
D+ L+ YY
Sbjct: 1213 DKKLQLDTNYY 1223
Score = 42.3 bits (95), Expect = 0.11
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFST 1152
L+ EP Y V+++DF SLYPS++ YN CF+T
Sbjct: 863 LVLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTT 898
>UniRef50_Q4SMZ1 Cluster: DNA polymerase; n=3; Deuterostomia|Rep: DNA
polymerase - Tetraodon nigroviridis (Green puffer)
Length = 1753
Score = 72.9 bits (171), Expect = 7e-11
Identities = 79/288 (27%), Positives = 122/288 (42%), Gaps = 45/288 (15%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIP 1176
L+ +P+ FY V++LDF SLYPS++ +N CF+T Q+ + + IP
Sbjct: 1075 LVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQREAQHSQKKNEDDEQEEIPEIP 1134
Query: 1177 RSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQN-DEAVK 1235
S LE G+LP + VK MK Q+ + V
Sbjct: 1135 DSNLEP-----------------------GILPKEIRKLVERRKQVKGLMKQQDINPDVY 1171
Query: 1236 KAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERA--------IKL 1287
RQ LKL AN YG ++S R +A V KGRE A ++
Sbjct: 1172 LQYDIRQKALKLTANSMYGCLGFSYS-RFYAKPLAALVTHKGREVDFDAHQRDGPEVLRS 1230
Query: 1288 VRENTT---------WNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVA 1338
+N N VIYGDTDS+ + +S E F++G ++ V +
Sbjct: 1231 ANKNAQICFPSRPIQMNLDVIYGDTDSIMINTNSKSLEEVFKLGNKVKAEVN-KLYKLLE 1289
Query: 1339 LKLEKVYQPCILQTKKRYVGFMFESPDQEKPT--YEAKGIETVRRDGC 1384
+ ++ V++ +L KK+Y + E+ + + E KG++ VRRD C
Sbjct: 1290 IDIDGVFKSLLLLKKKKYAALVVENLGDGRYSLKQELKGLDIVRRDWC 1337
>UniRef50_Q7ZA56 Cluster: DNA polymerase; n=1; Coprinopsis
cinerea|Rep: DNA polymerase - Coprinus cinereus (Inky cap
fungus) (Hormographiella aspergillata)
Length = 1426
Score = 72.1 bits (169), Expect = 1e-10
Identities = 76/265 (28%), Positives = 114/265 (43%), Gaps = 15/265 (5%)
Query: 1205 RGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHS-RQLGLKLIANVTYGYTAANFSGR 1263
+GVLP + VK MK + K + +Q LKL AN YG +S R
Sbjct: 885 KGVLPRLIATLVNRRRQVKSLMKDRTATPAKLLQYDIKQQALKLTANSMYGCLGFEYS-R 943
Query: 1264 MPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQ 1323
+A KGRE L R +L + N VIYGDTDS+FV EA +
Sbjct: 944 FYARPLAALTTFKGREILTRTRELAE---SLNLDVIYGDTDSVFVNSGVNDFAEALKTSA 1000
Query: 1324 QIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDG 1383
AV D + + L+ V+Q +L KK+Y E D + + E KG++ RR+
Sbjct: 1001 IFKKAVN-DQYNLLEIDLDCVFQRLLLLQKKKYAALKVE--DGSRTSVEVKGLDMKRREY 1057
Query: 1384 CPAGVKLLRQSLCELFTHGDMS--VVKRLVK--ATLSRLAETSLPVHELF--FTREYHGQ 1437
C ++ + L + + GD + VV+ + + T+S+ + E F F R
Sbjct: 1058 CALSKEVSQYVLARILS-GDSTEDVVETIHEYLGTMSQNVRSGQVKLEDFIVFKRLGKNP 1116
Query: 1438 AGYRPGASAPPNEIAKRIGMKDRRA 1462
Y S P ++A R+ K + A
Sbjct: 1117 EDYPDAKSQPHVQVALRMKAKGQSA 1141
Score = 48.0 bits (109), Expect = 0.002
Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 29/272 (10%)
Query: 915 VIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMK-NESD 973
++ +N DPDI+ G+E S +L R + L +D L R R+ +W +
Sbjct: 608 LLAAINKSDPDIIIGHEFLGVSLDVLLHRMKDLKVDHWSRLGRF----RRSKWPNIGKQG 663
Query: 974 YEGRII-GRVIFNVWR-LFRHELALSSYSF-ENCMYEVLNERV---PSYSYAQLSDWWCD 1027
R + GR+ ++ + ++ +++S E C + ER P + L
Sbjct: 664 TNVRFLNGRLTCDLASDAAKSMISSTTWSLTEMCSTHLGLERQDIDPDDTANYLDGSLSG 723
Query: 1028 ESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLM 1087
KM+ + V++ + + K+ I+ T +L L G W + L+ G R E ++
Sbjct: 724 PGKMMTF--VQHCEMDAHYQMAIATKVQILPLTRQLTNLAGNAWNKTLNGGRAERNEYIL 781
Query: 1088 LRAARPLNLIALSPTIKQRSTMR--------APETLP--------LIFEPESRFYSDPVI 1131
L L I T +++ + AP++ L+FEP+ + ++
Sbjct: 782 LHEFHRLKYICPDKTYGKKTVPKETADEEGDAPKSKAKRDKYKGGLVFEPKRGLWDSYIL 841
Query: 1132 VLDFQSLYPSMMIAYNYCFSTCIGRVQNINGE 1163
V+DF SLYPS++ YN F+T + NGE
Sbjct: 842 VMDFNSLYPSIIQEYNIDFTTVDPPEVDENGE 873
>UniRef50_Q6C675 Cluster: DNA polymerase; n=1; Yarrowia
lipolytica|Rep: DNA polymerase - Yarrowia lipolytica
(Candida lipolytica)
Length = 1375
Score = 71.7 bits (168), Expect = 2e-10
Identities = 84/320 (26%), Positives = 139/320 (43%), Gaps = 22/320 (6%)
Query: 1202 SVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAV-KKAMHSRQLGLKLIANVTYGYTAANF 1260
SV +G+LP + VK+ +K A KK +Q+ LKL AN YG F
Sbjct: 839 SVEQGILPRLIRTLVQRRREVKRLIKDPKASAAQKKQWDVKQMALKLTANSMYG--CLGF 896
Query: 1261 SG-RMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAF 1319
G R +A+ + GR+TL RA K + E + +V+YGDTDS+ + + +A
Sbjct: 897 EGSRFYAKPLANLTTSIGRDTL-RATKELAEAES--LQVVYGDTDSVMINTNTDTYKDAI 953
Query: 1320 EIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETV 1379
++G V + + ++ V+ +L KK+Y + + ++ E KG++
Sbjct: 954 KVGNDFKKKVNG-LYKQLEIDIDGVFARLLLTNKKKYAARL--ATEEGMGKIEVKGLDLR 1010
Query: 1380 RRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAE--TSLPVHE--LFFTREYH 1435
RR+ C L ++ D V L LAE S PV + F E++
Sbjct: 1011 RRETCQISKDACTYVLEQVLGPDDQETALNNVHEYLFELAEKLRSGPVKDESAPFPVEHY 1070
Query: 1436 G---QAGYRPGASAPPNE--IAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTP 1490
Q G P A PP + +A + +R + R G +S+++T G A+T
Sbjct: 1071 AILKQLGKDPKAYNPPIQPFVAVALRRLERGEVIREGDVMSFVIT--TVGSDESAKAQTT 1128
Query: 1491 QELTRDR-SLRPHVAYYATR 1509
++ R L+P YY ++
Sbjct: 1129 MDVKLSRGKLQPDAEYYISK 1148
Score = 61.3 bits (142), Expect = 2e-07
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 16/257 (6%)
Query: 902 VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEK 961
+I ++E++ + +++L+ DPD++CG+ +E +L R + L + + R+
Sbjct: 573 IIPCNSELDILSHMVRLIARVDPDLICGHRLEALHLDVLLHRLKELNVKDWSSMGRL--- 629
Query: 962 NRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSF---ENCMYEVLNERVPSYSY 1018
R+ +W +Y G + GR+I ++ + + SF E + + +R+
Sbjct: 630 -RRTQWP--HMNY-GVLDGRLILDMDNSYGRSVVQGCQSFDLTEMSLNTLGIKRMDIELD 685
Query: 1019 AQLSDWWCDESKMLRWIPVEYYLTKL-SGTVRMLQKLDIINRTSELARLFGLQWWEVLSR 1077
A S +L ++ T L +G V Q + + + +L L G W + L+
Sbjct: 686 AAHSKMVSSARPLLSYLMHCIQDTGLVAGIVIQTQAIPL---SKQLTNLAGNAWNKTLAG 742
Query: 1078 GSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLP--LIFEPESRFYSDPVIVLDF 1135
R ES++L I + + R L+ +P Y V+V+DF
Sbjct: 743 TRSGRNESILLHEFTRQGYIIPDKEAGRGTNKRGKAKFQGGLVLDPVKGLYDRHVLVMDF 802
Query: 1136 QSLYPSMMIAYNYCFST 1152
SLYPS++ YN CFST
Sbjct: 803 NSLYPSIIQEYNICFST 819
>UniRef50_P13382 Cluster: DNA polymerase alpha catalytic subunit A;
n=6; Saccharomycetales|Rep: DNA polymerase alpha
catalytic subunit A - Saccharomyces cerevisiae (Baker's
yeast)
Length = 1468
Score = 68.5 bits (160), Expect = 1e-09
Identities = 54/187 (28%), Positives = 81/187 (43%), Gaps = 7/187 (3%)
Query: 1201 TSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANF 1260
+ V +GVLP + VKK MK + D + RQ LKL AN YG
Sbjct: 899 SEVDQGVLPRLLANLVDRRREVKKVMKTETDPHKRVQCDIRQQALKLTANSMYG-CLGYV 957
Query: 1261 SGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFE 1320
+ R +A V KGRE L +L + N V+YGDTDS+ + + +A +
Sbjct: 958 NSRFYAKPLAMLVTNKGREILMNTRQLAE---SMNLLVVYGDTDSVMIDTGCDNYADAIK 1014
Query: 1321 IGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPT--YEAKGIET 1378
IG V + + + ++ V++ +L KK+Y T E KG++
Sbjct: 1015 IGLGFKRLVN-ERYRLLEIDIDNVFKKLLLHAKKKYAALTVNLDKNGNGTTVLEVKGLDM 1073
Query: 1379 VRRDGCP 1385
RR+ CP
Sbjct: 1074 KRREFCP 1080
Score = 52.4 bits (120), Expect = 1e-04
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 26/271 (9%)
Query: 906 SNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQK 965
+NE + ++ + DPD++ G+ ++ + R L + + R + +
Sbjct: 614 NNEKAMLSCFCAMLKVEDPDVIIGHRLQNVYLDVLAHRMHDLNIPTFSSIGRRLRRTWPE 673
Query: 966 RWMKNESDYEGRII-----GRVIFNVWRLFRHELALSSYSFE-NCMYEVL--NERVPSYS 1017
++ + S+ I GR+I ++ L S++ + MY+V E P
Sbjct: 674 KFGRGNSNMNHFFISDICSGRLICDIANEMGQSLTPKCQSWDLSEMYQVTCEKEHKPLDI 733
Query: 1018 YAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSR 1077
Q + D + M + ++ +T + + ++ ++ T +L L G W + L
Sbjct: 734 DYQNPQYQNDVNSMT--MALQENITNCMISAEVSYRIQLLTLTKQLTNLAGNAWAQTLGG 791
Query: 1078 GSQFRVESLMLRAARPLNLIA------LSPTIKQR----------STMRAPETLPLIFEP 1121
R E ++L I S KQR ++ +A L+FEP
Sbjct: 792 TRAGRNEYILLHEFSRNGFIVPDKEGNRSRAQKQRQNEENADAPVNSKKAKYQGGLVFEP 851
Query: 1122 ESRFYSDPVIVLDFQSLYPSMMIAYNYCFST 1152
E + + V+V+DF SLYPS++ +N CF+T
Sbjct: 852 EKGLHKNYVLVMDFNSLYPSIIQEFNICFTT 882
>UniRef50_Q9FHA3 Cluster: DNA polymerase alpha catalytic subunit; n=1;
Arabidopsis thaliana|Rep: DNA polymerase alpha catalytic
subunit - Arabidopsis thaliana (Mouse-ear cress)
Length = 1492
Score = 68.1 bits (159), Expect = 2e-09
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 14/193 (7%)
Query: 1195 GIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKK-AMHSRQLGLKLIANVTY 1253
G+ + +S G+LP ++VK +KM+ + +K + RQ LKL AN Y
Sbjct: 943 GVPRLPSSQTPGILPKLMEHLVSIRKSVK--LKMKKETGLKYWELDIRQQALKLTANSMY 1000
Query: 1254 GYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGR 1313
G + S R +A+ + +GR+ L+R + LV+ + N +VIYGDTDS+ +
Sbjct: 1001 GCLGFSNS-RFYAKPLAELITLQGRDILQRTVDLVQNHL--NLEVIYGDTDSIMI----H 1053
Query: 1314 SRLEAFEIGQQIADAVTAD-NPPPVALKL--EKVYQPCILQTKKRYVGFMFESPDQEK-P 1369
S L+ E + I V + N LK+ + +Y+ +L KK+Y + D +
Sbjct: 1054 SGLDDIEEVKAIKSKVIQEVNKKYRCLKIDCDGIYKRMLLLRKKKYAAVKLQFKDGKPCE 1113
Query: 1370 TYEAKGIETVRRD 1382
E KG++ VRRD
Sbjct: 1114 DIERKGVDMVRRD 1126
Score = 44.4 bits (100), Expect = 0.027
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFST 1152
L+ EP+ Y V++LDF SLYPS++ YN CF+T
Sbjct: 901 LVLEPKRGLYDKYVLLLDFNSLYPSIIQEYNICFTT 936
>UniRef50_A7KAV9 Cluster: DNA polymerase; n=1; Myodes glareolus
cytomegalovirus 1|Rep: DNA polymerase - Myodes glareolus
cytomegalovirus 1
Length = 873
Score = 67.7 bits (158), Expect = 2e-09
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCI---GRVQNINGETAYEFGAWRLR 1174
+ EPE FY PV+V DF SLYPS++++ N C+ST I V +++ ET L
Sbjct: 691 VLEPEVGFYHSPVLVFDFASLYPSIIMSQNLCYSTLILEGSAVDHLDEETDI------LS 744
Query: 1175 IPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAV 1234
+P S+ + FV+ V+R +L + V+ + D
Sbjct: 745 VPVSEGQV-------------YRFVREHVQRSLLAELLVRWLAQRRLVRGLARESEDPMR 791
Query: 1235 KKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLV 1288
+ + +Q LK+ N YG+T +G +PC+ +A S+ GR+ L ++ V
Sbjct: 792 RVLLDKQQAALKVTCNAFYGFTGV-AAGMLPCLAIAASITKIGRDMLLATVEYV 844
>UniRef50_O33845 Cluster: DNA polymerase (EC 2.7.7.7) (Pol Tfu)
[Contains: Tag pol-1 intein (Tsp-TY pol-1) (Intein I);
Tag pol-2 intein (Tsp-TY pol-2) (Intein II); Tag pol-3
intein (Tsp-TY pol-3) (Intein III)]; n=6; cellular
organisms|Rep: DNA polymerase (EC 2.7.7.7) (Pol Tfu)
[Contains: Tag pol-1 intein (Tsp-TY pol-1) (Intein I);
Tag pol-2 intein (Tsp-TY pol-2) (Intein II); Tag pol-3
intein (Tsp-TY pol-3) (Intein III)] - Thermococcus
aggregans
Length = 1829
Score = 66.9 bits (156), Expect = 4e-09
Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 11/268 (4%)
Query: 872 NHFLKKSLTGIIVVDSSSRKYLDGCVFNVPVI-YVSNEIETIDEVIKLVNIHDPDIMCGY 930
+ F K + I D + + ++P + VSNE E I +++V DPD++ Y
Sbjct: 150 DEFGKGEIIMISYADEEEARVITWKNIDLPYVDVVSNEREMIKRFVQIVREKDPDVLITY 209
Query: 931 EIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLF 990
+ Y+++RAE LG+ +L L R E K +S + I GR+ F+++ +
Sbjct: 210 NGDNFDLPYLIKRAEKLGVTLL--LGRDKEHPEPKIHRMGDS-FAVEIKGRIHFDLFPVV 266
Query: 991 RHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRM 1050
R + L +Y+ E VL + +++ W E M + +Y + T +
Sbjct: 267 RRTINLPTYTLEAVYEAVLGKTKSKLGAEEIAAIWETEESMKKL--AQYSMEDARATYEL 324
Query: 1051 LQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQ--RST 1108
+ + +ELA+L G W+V + VE +LR A N +A + ++ R
Sbjct: 325 GK--EFFPMEAELAKLIGQSVWDVSRSSTGNLVEWYLLRVAYERNELAPNKPDEEEYRRR 382
Query: 1109 MRAPETLPLIFEPESRFYSDPVIVLDFQ 1136
+R + EPE + + + LDF+
Sbjct: 383 LRTTYLGGYVKEPERGLWEN-IAYLDFR 409
Score = 38.7 bits (86), Expect = 1.3
Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 11/182 (6%)
Query: 1298 VIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYV 1357
++ +TD + +PG + ++ + + P + L+ E Y KKRY
Sbjct: 1594 ILVHNTDGFYATIPGEKPETIKKKAKEFLKYINSKLPGLLELEYEGFYLRGFFVAKKRYA 1653
Query: 1358 GFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSR 1417
E+ +G+E VRRD + + L + + +VK +
Sbjct: 1654 VI------DEEGRITTRGLEVVRRDWSEIAKETQAKVLEAILKEDSVEKAVEIVKDVVEE 1707
Query: 1418 LAETSLPVHELFFTREY-HGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTC 1476
+A+ +P+ +L + + Y+ A P IAKR+ K + R G +S++V
Sbjct: 1708 IAKYQVPLEKLVIHEQITKDLSEYK--AIGPHVAIAKRLAAKGIKV--RPGTIISYIVLR 1763
Query: 1477 GA 1478
G+
Sbjct: 1764 GS 1765
>UniRef50_O29753 Cluster: DNA polymerase; n=1; Archaeoglobus
fulgidus|Rep: DNA polymerase - Archaeoglobus fulgidus
Length = 781
Score = 66.5 bits (155), Expect = 6e-09
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 17/208 (8%)
Query: 1222 VKKSMKMQNDEAVK-KAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRET 1280
+K +K + E+ + K + +Q LK++ N YGY N + R C A++ A GR
Sbjct: 468 LKVELKNLSPESSEYKLLDIKQQTLKVLTNSFYGYMGWNLA-RWYCHPCAEATTAWGRHF 526
Query: 1281 LERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALK 1340
+ + K+ + KV+YGDTDS+FV G ++ + + ++ + + P+ ++
Sbjct: 527 IRTSAKIAE---SMGFKVLYGDTDSIFVTKAGMTKEDVDRLIDKLHEEL------PIQIE 577
Query: 1341 LEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFT 1400
+++ Y KKRY G E KG+E R D C K+ R+ + +
Sbjct: 578 VDEYYSAIFFVEKKRYAGL------TEDGRLVVKGLEVRRGDWCELAKKVQREVIEVILK 631
Query: 1401 HGDMSVVKRLVKATLSRLAETSLPVHEL 1428
+ LVK + R+ E + + E+
Sbjct: 632 EKNPEKALSLVKDVILRIKEGKVSLEEV 659
Score = 57.2 bits (132), Expect = 4e-06
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 902 VIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAE--ILGLDVLKDLSRIT 959
+I +E + I + +KL+ +DPDI+ GY + W Y+ +RAE + LDV +D S +
Sbjct: 198 IILTGDERKIISDFVKLIKSYDPDIIVGYNQDAFDWPYLRKRAERWNIPLDVGRDGSNVV 257
Query: 960 EKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNER--VPSYS 1017
+ + +I GR+ +++ + + EN + E L + +
Sbjct: 258 FRGGRP-----------KITGRLNVDLYDIAMRISDIKIKKLEN-VAEFLGTKIEIADIE 305
Query: 1018 YAQLSDWWC--DESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVL 1075
+ +W ++ K+L + + T L +++ EL+++ L +V
Sbjct: 306 AKDIYRYWSRGEKEKVLNYARQDAINTYLIAK-------ELLPMHYELSKMIRLPVDDVT 358
Query: 1076 SRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDF 1135
G +V+ L+L A+ + IA +P S A + EPE R + V LDF
Sbjct: 359 RMGRGKQVDWLLLSEAKKIGEIAPNPPEHAESYEGA-----FVLEPE-RGLHENVACLDF 412
Query: 1136 QSLYPSMMIAYN 1147
S+YPS+MIA+N
Sbjct: 413 ASMYPSIMIAFN 424
>UniRef50_Q4JCH8 Cluster: DNA polymerase B3; n=3; Sulfolobaceae|Rep:
DNA polymerase B3 - Sulfolobus acidocaldarius
Length = 782
Score = 66.1 bits (154), Expect = 8e-09
Identities = 61/248 (24%), Positives = 117/248 (47%), Gaps = 16/248 (6%)
Query: 907 NEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKR 966
++I I E IK VN +PDI+ GY W Y++ERAE+ G+ V I K +
Sbjct: 219 DDINVIREFIKFVNDFEPDIIFGYNSNSFDWRYLVERAELRGIKV-----AIGRKVNSEP 273
Query: 967 WMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWC 1026
Y + GR+ ++ +F + S + + + + + ++ +W
Sbjct: 274 SQGVYGHYS--VTGRLNVDLAGVFCSSRSKSLIDLADNLGVMPKNKREILEWYEVPRYWD 331
Query: 1027 DESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESL 1086
D+SK R I +++ L+ + + Q ++ +L ++ GL ++ S R+E L
Sbjct: 332 DKSK--REILLKHNLSNIKSIYDIGQ--SNLHYLIQLVKVTGLPLDQLSMASSGHRIEWL 387
Query: 1087 MLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAY 1146
++R ++ N P ++R T + E +I P S +++ V +LDF ++YPS+++ Y
Sbjct: 388 LVRESKKYN--EFIPNREERRTEASDE--GIIVPPVSGLHNN-VYMLDFSTIYPSIILKY 442
Query: 1147 NYCFSTCI 1154
N T +
Sbjct: 443 NISPDTLV 450
Score = 42.7 bits (96), Expect = 0.081
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 21/199 (10%)
Query: 1231 DEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRE 1290
D ++ + L+ I N Y Y + R E A+ + GRE + + +K+V+E
Sbjct: 497 DPEKRRRLEEELRALRSILNSFYDYIRWT-NARWYVKECAEGLFEWGRELILQILKIVKE 555
Query: 1291 NTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCI- 1349
+ +VIY DTD MF + + ++ + IA+ ++ + LK K Y I
Sbjct: 556 S---GFQVIYADTDLMFF----KGENDPKKLEEDIANRLSLN------LKFNKFYTKLIL 602
Query: 1350 LQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKR 1409
L+ KK+Y ++ + GIE R + C ++L+ + ++ ++ R
Sbjct: 603 LEGKKQYAALTKDN------KVDMVGIEDYRNNWCDLAKEVLQNVVDQVLRSDKINEAVR 656
Query: 1410 LVKATLSRLAETSLPVHEL 1428
VK+ + L + +L
Sbjct: 657 YVKSVIYSLRRGEFKIEDL 675
>UniRef50_O27276 Cluster: DNA polymerase; n=3;
Methanobacteriaceae|Rep: DNA polymerase -
Methanobacterium thermoautotrophicum
Length = 586
Score = 66.1 bits (154), Expect = 8e-09
Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 16/247 (6%)
Query: 905 VSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILG--LDVLKDLSRITEKN 962
V +E E ++ ++V PDI+ GY + + Y+ RA ILG LD+ D S+I
Sbjct: 220 VEDERELLERFAEIVIDKKPDILVGYNSDNFDFPYITRRAAILGAELDLGWDGSKI---R 276
Query: 963 RQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLS 1022
+R N + I G V +++ + R + L Y+ E E+ E +L
Sbjct: 277 TMRRGFANAT----AIKGTVHVDLYPVMRRYMNLDRYTLERVYQELFGEEKIDLPGDRLW 332
Query: 1023 DWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFR 1082
++W + LR Y L + T R+ +K+ +N EL RL G +++ + +
Sbjct: 333 EYW--DRDELRDELFRYSLDDVVATHRIAEKILPLN--LELTRLVGQPLFDISRMATGQQ 388
Query: 1083 VESLMLRAARPL-NLIALSPTIKQRSTMRAPETL-PLIFEPESRFYSDPVIVLDFQSLYP 1140
E ++R A L+ P+ S+ R + + EPE + + ++ DF+SLYP
Sbjct: 389 AEWFLVRKAYQYGELVPNKPSQSDFSSRRGRRAVGGYVKEPEKGLHEN-IVQFDFRSLYP 447
Query: 1141 SMMIAYN 1147
S++I+ N
Sbjct: 448 SIIISKN 454
Score = 49.6 bits (113), Expect = 7e-04
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 1205 RGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYG-YTAANFSGR 1263
RG +P +K+ MK +D +K ++ +Q LK +AN YG Y + F R
Sbjct: 483 RGFVPSVIGEILSERVRIKEEMKGSDDPMERKILNVQQEALKRLANTMYGVYGYSRF--R 540
Query: 1264 MPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPG 1312
+E A+++ A GR+ +++ IK E + +Y DTD + G
Sbjct: 541 WYSMECAEAITAWGRDYIKKTIKTAEE---FGFHTVYADTDGFYATYRG 586
>UniRef50_O48653 Cluster: DNA polymerase alpha catalytic subunit; n=4;
Oryza sativa|Rep: DNA polymerase alpha catalytic subunit
- Oryza sativa subsp. japonica (Rice)
Length = 1534
Score = 63.7 bits (148), Expect = 4e-08
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 5/215 (2%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMP 1265
GVLP + VK +K + ++ +Q LKL AN YG + S R
Sbjct: 963 GVLPELLKSLVERRRMVKSWLKTASG-LKRQQFDIQQQALKLTANSMYGCLGFSNS-RFY 1020
Query: 1266 CVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQI 1325
+A+ + +GRE L+ + LV+ N N +VIYGDTDS+ + A I ++
Sbjct: 1021 AKPLAELITLQGREILQNTVDLVQNNL--NLEVIYGDTDSIMIHTGLDDISRAKGIAGKV 1078
Query: 1326 ADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCP 1385
V + + L+ +Y+ +L KK+Y + E KG++ VRRD
Sbjct: 1079 IQEVNKKYRC-LEIDLDGIYKRMLLLKKKKYAAIKVALDGSLRENIERKGLDMVRRDWSL 1137
Query: 1386 AGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAE 1420
++ L ++ + G V + ++L ++ E
Sbjct: 1138 LSKEIGDFCLNQILSGGSCDDVIESIHSSLVQVQE 1172
Score = 45.6 bits (103), Expect = 0.012
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 1103 IKQRSTMRAPETLP-LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFST 1152
+ Q T + P L+ EP+ Y V++LDF SLYPS++ YN CF+T
Sbjct: 894 VDQGKTKKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTT 944
>UniRef50_O93746 Cluster: DNA polymerase 2; n=15; Thermoprotei|Rep:
DNA polymerase 2 - Aeropyrum pernix
Length = 803
Score = 63.7 bits (148), Expect = 4e-08
Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 14/251 (5%)
Query: 916 IKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYE 975
++ V DPD++ GY W Y++ERA +LG+ + + + +
Sbjct: 237 VERVKSIDPDVIVGYNQNRFDWPYLVERARVLGVKLAVGRRSV----EPQPGLYGHYSVS 292
Query: 976 GRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWI 1035
GR+ ++ L ++ + + ERV + + Q+ ++W D SK R I
Sbjct: 293 GRLNVDLLDFAEELHEVKVKTLEEVADYLGVVKIGERV-TLEWWQIGEYWDDPSK--REI 349
Query: 1036 PVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLN 1095
+Y + T+ + +K + +EL+++ GL +V++ FR+E ++R A L
Sbjct: 350 LRKYLRDDVRSTMGLAEKF--LPFGAELSQVSGLPLDQVMAASVGFRLEWRLIREAAKLG 407
Query: 1096 LIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIG 1155
L P +RS R + + P+ + D + VLDF S+YP++M+ YN T +
Sbjct: 408 --ELVPNRVERSEGRYAGAI--VLRPKPGVHED-IAVLDFASMYPNIMVKYNVGPDTLVR 462
Query: 1156 RVQNINGETAY 1166
+ E Y
Sbjct: 463 PGEEYGEEEVY 473
Score = 56.8 bits (131), Expect = 5e-06
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 23/164 (14%)
Query: 1222 VKKSMKMQNDEAVK-KAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRET 1280
++ MK ++ + K + RQ +KL+AN +YGY + R C E A++V A GR
Sbjct: 504 IRSEMKKHPPDSPEYKLLDERQKAIKLLANASYGYMGWPHA-RWYCRECAEAVTAWGRSI 562
Query: 1281 LERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFE-IGQQIADAVTADNPPPVAL 1339
+ AI+ E +VIYGDTDS+FV ++ E E + + + + + D +
Sbjct: 563 IRTAIRKAGE---LGLEVIYGDTDSLFV----KNDPEKVERLIRFVEEELGFD------I 609
Query: 1340 KLEKVYQPCIL-QTKKRYVGFMFESPDQEKPTYEAKGIETVRRD 1382
K++KVY+ + KKRYVG + + G E VR D
Sbjct: 610 KVDKVYRRVFFTEAKKRYVGLTVDG------KIDVVGFEAVRGD 647
>UniRef50_Q58295 Cluster: DNA polymerase (EC 2.7.7.7) [Contains: Mja
pol-1 intein; Mja pol-2 intein]; n=1; Methanocaldococcus
jannaschii|Rep: DNA polymerase (EC 2.7.7.7) [Contains:
Mja pol-1 intein; Mja pol-2 intein] - Methanococcus
jannaschii
Length = 1634
Score = 62.5 bits (145), Expect = 9e-08
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 18/249 (7%)
Query: 1250 NVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVL 1309
N YGY A R E A+ V GR+ + ++ V+E + KV+Y DTD + +
Sbjct: 1358 NSVYGYLAFP-RARFYSRECAEIVTYLGRKYI---LETVKEAEKFGFKVLYIDTDGFYAI 1413
Query: 1310 VPGR-SRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEK 1368
+ S+ E + + + + + P + L+ E ++ I TKKRY E
Sbjct: 1414 WKEKISKEELIKKAMEFVEYINSKLPGTMELEFEGYFKRGIFVTKKRYALI------DEN 1467
Query: 1369 PTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHEL 1428
KG+E VRRD R+ L L G + K++++ + L E + +L
Sbjct: 1468 GRVTVKGLEFVRRDWSNIAKITQRRVLEALLVEGSIEKAKKIIQDVIKDLREKKIKKEDL 1527
Query: 1429 -FFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLA 1487
+T+ Y+ +AP EIAK++ M++ + I + G + +++ G + A
Sbjct: 1528 IIYTQLTKDPKEYK--TTAPHVEIAKKL-MREGKRI-KVGDIIGYIIVKGTKSIS--ERA 1581
Query: 1488 RTPQELTRD 1496
+ P+E+ D
Sbjct: 1582 KLPEEVDID 1590
>UniRef50_A7AR93 Cluster: DNA polymerase alpha subunit, putative; n=1;
Babesia bovis|Rep: DNA polymerase alpha subunit, putative
- Babesia bovis
Length = 1483
Score = 62.1 bits (144), Expect = 1e-07
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 8/182 (4%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMP 1265
G+LP +VK ++ ++ +++ K + RQL LKL+AN YG + +S R
Sbjct: 853 GMLPQILKRLVELRASVKAAIAVEKNDSRKAQLGVRQLALKLVANSLYGCLGSVYS-RFH 911
Query: 1266 CVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFV--LVPGRSRLEAFEIGQ 1323
+A + +GR L+ + V EN ++ VIYGDTDS+ + + ++E +
Sbjct: 912 ARHMAAYITQQGRLVLQSTRERV-EN-QYSLHVIYGDTDSLMIDTNIRDDGSETSYEAAK 969
Query: 1324 QIADAVTAD---NPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVR 1380
QIA+ + + + + + ++ ++ +L KK+Y E KG++ +R
Sbjct: 970 QIANTLMSSINKSHKKLEIGMDAMFNRLLLLKKKKYAALKVVDYKSRIFAREIKGLDFIR 1029
Query: 1381 RD 1382
RD
Sbjct: 1030 RD 1031
Score = 49.6 bits (113), Expect = 7e-04
Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 32/259 (12%)
Query: 916 IKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYE 975
+K + + DPDI+ ++I N +L+R L + + SRI + N +
Sbjct: 588 MKTLEVIDPDIVMCHDIAQNFSEPLLKRCNALNIPLRVSFSRIRATRKY-----NHPFFA 642
Query: 976 GRIIGRVIFNVWRLFRHELA--LSSYSFENCMYEV-----LNERV----PSYSYAQLSDW 1024
GRI F RL EL S+Y +C+ ++ + E S++ +L++
Sbjct: 643 GRI-----FCDTRLLTKELHHNRSNYDLSSCVADLVYATPMKEHALYTKQSFNLKELTNC 697
Query: 1025 WCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVE 1084
+ + + + V+ T ++ KL + T EL + G W + R +
Sbjct: 698 FGETAMKELMVLVQANSKCAVDTFNLVIKLQALPLTKELTNIAGNLWSRSVQCARSERND 757
Query: 1085 SLMLRAARPLNLIA---LSPTIKQRSTMRAPETLP--------LIFEPESRFYSDPVIVL 1133
L+L I KQ S ++ L+ EPE+ Y + V++L
Sbjct: 758 FLLLHEFHRSKYIIDHHFERFHKQTSDADKDDSDSKKKNYEGGLVLEPETGLYDNFVLLL 817
Query: 1134 DFQSLYPSMMIAYNYCFST 1152
DF SLYPS++ +N CF+T
Sbjct: 818 DFNSLYPSIIQEFNVCFTT 836
>UniRef50_A7SAB6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1242
Score = 60.9 bits (141), Expect = 3e-07
Identities = 57/182 (31%), Positives = 81/182 (44%), Gaps = 9/182 (4%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHS-RQLGLKLIANVTYGYTAANFSGRM 1264
G+LP + VK MK + ++ K + RQ LKL AN YG + S R
Sbjct: 693 GILPTEIRKLVERRRQVKGMMKTVSRDSDKYLQYDIRQKALKLTANSMYGCLGFSHS-RF 751
Query: 1265 PCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQ 1324
+A V +KGRE L + LV++ + VIYGDTDS+ + E ++G +
Sbjct: 752 YAKPLAALVTSKGREILMKTKDLVQQ---MHLDVIYGDTDSIMINTNSTDLQEVKKVGNK 808
Query: 1325 IADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMF-ESPD-QEKPTYEAKGIETVRRD 1382
+ PV+ L V IL + RY M E+ D E KG++ VRRD
Sbjct: 809 VRHPHATYLVLPVSYTLRFVNLLHILFS--RYAAIMISENEDGTMNEVKEMKGLDIVRRD 866
Query: 1383 GC 1384
C
Sbjct: 867 WC 868
Score = 46.4 bits (105), Expect = 0.007
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFST 1152
L+ EP+ FY +++LDF SLYPS++ YN CF+T
Sbjct: 634 LVLEPKKGFYDKFILLLDFNSLYPSIIQEYNICFTT 669
>UniRef50_A5C6G9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 505
Score = 60.1 bits (139), Expect = 5e-07
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 13 SEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCP---TQNPEPQLLYQIAAS 69
S G +K+VPV+RI+G G K CLH+H PY Y+PC Q+P+ Y A S
Sbjct: 59 SRAEGGMVKEVPVIRIYGSTPVGQKTCLHVHRALPYLYVPCTDLMPQSPQEADTYTHAVS 118
Query: 70 L--DKALNIAMKQATSSNQHVYKISLVKGLP 98
L +KAL I + H+ K+ +P
Sbjct: 119 LGVEKALKIDYNLYGMGHLHLSKMKFRHPVP 149
>UniRef50_Q4N0E2 Cluster: DNA polymerase alpha, putative; n=3;
Theileria|Rep: DNA polymerase alpha, putative - Theileria
parva
Length = 1451
Score = 59.7 bits (138), Expect = 7e-07
Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 34/300 (11%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMP 1265
GVLP +K +K + +E + + +RQL LKLIAN YG +NFS R
Sbjct: 789 GVLPSILKRLVELRLNIKNIIKGEKNETRRVQLSTRQLALKLIANSIYGCLGSNFS-RFH 847
Query: 1266 CVEVADSVVAKGRET------------------LERAIKLVRENTTWNAKVIYGDTDSMF 1307
C +A + G + L R+ K EN +N +VIYGDTDS+
Sbjct: 848 CKYIASYITKLGTASRAGNYPIPHFTTYLHSRELLRSTKEKVEN-VFNLQVIYGDTDSLM 906
Query: 1308 VLVPGR--SRLEAFEIGQQIA-DAVTADNPPPVALK--LEKVYQPCILQTKKRYVGFMFE 1362
+ R L + Q+A + VT N L+ ++ V+ +L KK+Y
Sbjct: 907 INTNIRDDGNLTNYNAANQLANNLVTFINKSHKKLEIGIDAVFTRLLLLKKKKYASLKVV 966
Query: 1363 SPDQEKPTYEAKGIETVRRDGC----PAGVKLLRQSLCELFTHGDMSVVKRLVKATLS-- 1416
+ E KG++ +RRD G KLL L + G +V+ + ++
Sbjct: 967 DYGSGQFEREIKGLDFIRRDWSLLTKEIGNKLLNIILNSNYYDGVDGIVQEIHSTLINLN 1026
Query: 1417 -RLAETSLPVHELFFTREY-HGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLV 1474
+L S+ + + T++ Y + P +A R+ K TG +S+++
Sbjct: 1027 EQLNNQSIELSKFLITKQLTKNPKEYSDVQNLPHVSVALRLNEKGLGNY-STGHEISYII 1085
Score = 50.4 bits (115), Expect = 4e-04
Identities = 60/252 (23%), Positives = 109/252 (43%), Gaps = 35/252 (13%)
Query: 923 DPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYEGRIIGRV 982
DPD++ G++I N +++R +L + + LSR+ K K+ S + GR+
Sbjct: 539 DPDVVIGHDIHQNCVDLLVKRCNLLNIPLRLSLSRL------KLVKKSHSPI---LFGRL 589
Query: 983 IFNVWRLFRHELALS--SYSFENCMYEVLN-ERVPSYSYAQLSDWWCDESKMLRWIPVEY 1039
+ RL EL S +Y+ C+ ++L + V ++ S + E + L P
Sbjct: 590 FCDT-RLLTKELNPSKENYNLITCVNDILEIKNVGDLNFYSRSAFSMTEIQNLFGKP--- 645
Query: 1040 YLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIA- 1098
+ +++ I+ T EL + G W + R++ L++ I
Sbjct: 646 --DSIKHLLKLHYSFQILPLTKELTIIAGNTWSRSIQCARSERIDFLLMHEFYRNKYILD 703
Query: 1099 -LSPTIKQRSTM-----------RAPETLP----LIFEPESRFYSDPVIVLDFQSLYPSM 1142
+ K++S +T L+FEP S Y + +++LDF SLYPS+
Sbjct: 704 NVFNKFKEQSITTLGFYFYIHFTHLDDTKSYEGGLVFEPISGLYDNFILLLDFNSLYPSI 763
Query: 1143 MIAYNYCFSTCI 1154
+ YN CF+T +
Sbjct: 764 IQEYNICFTTTV 775
>UniRef50_P52025 Cluster: DNA polymerase; n=6; Methanococcus|Rep: DNA
polymerase - Methanococcus voltae
Length = 824
Score = 59.7 bits (138), Expect = 7e-07
Identities = 59/267 (22%), Positives = 122/267 (45%), Gaps = 13/267 (4%)
Query: 891 KYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLD 950
K + +N V YV +E E I + I+++ +D ++ Y + + Y+ +RA I ++
Sbjct: 214 KKFENSEYNGCVDYVKDEKELIQKTIEILKQYD--VIYTYNGDNFDFPYLKKRANIYEIE 271
Query: 951 VLKDLSRITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLN 1010
+ D + +++ + + K + + +I G + +++ + R L L+ Y EN + E+
Sbjct: 272 LDFDNASNSQQPQIIKISKGGINRKSKIPGIIHIDLYPIARKLLNLTKYKLENVVQELFK 331
Query: 1011 ERVPSYSYAQLSDWW-CDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGL 1069
+ Y + W +++ +LR+ + T G + L+I+ +R+
Sbjct: 332 INKEAVDYGDIPKMWETEDTTLLRYAYEDALYTYKMGNYFL--PLEIM-----FSRIVNQ 384
Query: 1070 QWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLP--LIFEPESRFYS 1127
++ S VE L+L+ + N+I+ + RA + + EP
Sbjct: 385 PLYDTSRMNSSQMVEFLLLKRSFEQNMISPNRPSSSSYRERAKFSYEGGYVREPLKGIQE 444
Query: 1128 DPVIVLDFQSLYPSMMIAYNYCFSTCI 1154
D ++ LDF SLYPS++I++N T I
Sbjct: 445 D-IVSLDFMSLYPSILISHNISPETVI 470
Score = 59.7 bits (138), Expect = 7e-07
Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 1224 KSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLER 1283
K K + DE + H Q +K++AN YGY A + R + A+ V GR+ ++
Sbjct: 505 KIQKNEFDEEYSRLEHE-QKSIKVLANSHYGYLAFPMA-RWYSDKCAEMVTGLGRKYIQE 562
Query: 1284 AIKLVRENTTWNAKVIYGDTDSMFVL----------------------VPGRSRLEAFEI 1321
I+ E + KVIY DTD + +P S+ E +
Sbjct: 563 TIEKAEE---FGFKVIYADTDGFYAKWDYDKLQKGKKEENDKSDKLSNLPKLSKEELIIL 619
Query: 1322 GQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESPDQEKPTYEAKGIETVRR 1381
++ + + P + L+ E ++ + TKK+Y + E KG+E VRR
Sbjct: 620 TKKFLKGINEELPEGMELEFEGHFKRGLFVTKKKYA--LIEDDGH----IVVKGLEVVRR 673
Query: 1382 DGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFF-TREYHGQAGY 1440
D + + L GD+++ K+++K T+ L + ++ ++L T+ Y
Sbjct: 674 DWSNIAKDTQQAVIRALLEDGDVNLAKKIIKNTIDNLKKGNIDKNDLLIHTQLTKNIEEY 733
Query: 1441 RPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGV 1481
+ ++AP E+AK+I K R R G +S+++ G+ +
Sbjct: 734 K--STAPHIEVAKKI--KQRGDSVRVGDVISYIIVKGSRSI 770
>UniRef50_Q87NC2 Cluster: DNA polymerase; n=2; Vibrio|Rep: DNA
polymerase - Vibrio parahaemolyticus
Length = 787
Score = 57.6 bits (133), Expect = 3e-06
Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 34/294 (11%)
Query: 1231 DEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRE 1290
D A K + +K+I N YG ++ R +A S+ +G E +++ K++ E
Sbjct: 481 DVAKKNNEKAFSQAIKIIMNSFYGVLGSS-GCRFFDTRLASSITMRGHEIMKQT-KVLIE 538
Query: 1291 NTTWNAKVIYGDTDSMFVLVPGR-SRLEAFEIGQQIADAVTA----------DNPPPVAL 1339
N + +VIYGDTDS FV + G S+ EA E+G + + + + + + +
Sbjct: 539 NKGY--QVIYGDTDSTFVSLNGSYSQAEADEVGNHLVEYINSWWQEHLRAEYNLTSMLEI 596
Query: 1340 KLEKVYQPCILQT--------KKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLL 1391
+ E Y+ ++ T KKRY G + E +QE+ + KG+E+ R D P K
Sbjct: 597 EYETHYRKFLMPTIRGAETGSKKRYAGLIGEG-EQERIVF--KGLESARTDWTPLAQK-F 652
Query: 1392 RQSLCELFTHGD--MSVVKRLVKATLSRLAETSLPVHELFFTREYHG-QAGYRPGASAPP 1448
+ +L + HG+ V+ +V+ T + + L V++ R+ H Q P A
Sbjct: 653 QNTLYRMVFHGEDPSDYVREVVEKTNNGEFDDQL-VYQKRLRRKLHEYQKNIPPQVRAA- 710
Query: 1449 NEIAKRIGMKDRRAIP-RTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRP 1501
+A I K R + + R+ +L+T P R + + D+ L+P
Sbjct: 711 -RLADDINAKLGRPLQYQNRGRIEYLITLNGPEPHEYRNSPIDYQHYIDKQLKP 763
>UniRef50_P74918 Cluster: DNA polymerase (EC 2.7.7.7) (Pol Tfu)
[Contains: Endonuclease PI-TfuI (EC 3.1.-.-) (Tfu pol-1
intein); Endonuclease PI-TfuII (EC 3.1.-.-) (Tfu pol-2
intein)]; n=1; Thermococcus fumicolans|Rep: DNA
polymerase (EC 2.7.7.7) (Pol Tfu) [Contains: Endonuclease
PI-TfuI (EC 3.1.-.-) (Tfu pol-1 intein); Endonuclease
PI-TfuII (EC 3.1.-.-) (Tfu pol-2 intein)] - Thermococcus
fumicolans
Length = 1523
Score = 57.6 bits (133), Expect = 3e-06
Identities = 62/266 (23%), Positives = 123/266 (46%), Gaps = 14/266 (5%)
Query: 874 FLKKSLTGIIVVDSSSRKYLDGCVFNVPVI-YVSNEIETIDEVIKLVNIHDPDIMCGYEI 932
F + + I D + + ++P + VS E E I +K+V DPD++ Y
Sbjct: 152 FAEGPILMISYADEEGARVITWKKIDLPYVDVVSTEKEMIKRFLKVVKEKDPDVLITYNG 211
Query: 933 EMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRH 992
+ + Y+ +R+E LG+ + L R + + +R M + E + GR+ F+++ + RH
Sbjct: 212 DNFDFAYLKKRSEKLGVKFI--LGRDGSEPKIQR-MGDRFAVE--VKGRIHFDLYPVIRH 266
Query: 993 ELALSSYSFENCMYEVLNERVPSYSYA-QLSDWWCDESKMLRWIPVEYYLTKLSGTVRML 1051
+ L +Y+ E +YE + + YA +++ W + + L + Y + T +
Sbjct: 267 TINLPTYTLE-AVYEAIFGQPKEKVYAEEIAQAW-ETGEGLERV-ARYSMEDAKVTYELG 323
Query: 1052 QKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALS-PTIKQRSTMR 1110
+ + ++L+RL G +W+V + VE +LR A N +A + P+ ++ R
Sbjct: 324 R--EFFPMEAQLSRLVGQSFWDVSRSSTGNLVEWYLLRKAYERNELAPNKPSGRELERRR 381
Query: 1111 APETLPLIFEPESRFYSDPVIVLDFQ 1136
+ EPE + + + LDF+
Sbjct: 382 GGYAGGYVKEPERGLWEN-IAYLDFR 406
Score = 55.6 bits (128), Expect = 1e-05
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMP 1265
G +P Q VKK MK D KK + RQ +K++AN YGY R
Sbjct: 807 GFIPSLLGDLLDERQKVKKHMKATVDPIEKKLLDYRQRAIKILANSFYGY-YGYAKARWY 865
Query: 1266 CVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDT 1303
C E A+SV A GR+ +E ++ + E + KV+Y D+
Sbjct: 866 CKECAESVTAWGRQYIETTMREIEEK--FGFKVLYADS 901
Score = 52.0 bits (119), Expect = 1e-04
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 11/182 (6%)
Query: 1298 VIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYV 1357
++ +TD F +PG + ++ + + P + L+ E Y+ TKK+Y
Sbjct: 1285 ILVHNTDGFFATIPGADAETVKKKAREFLNYINPKLPGLLELEYEGFYRRGFFVTKKKYA 1344
Query: 1358 GFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSR 1417
E+ +G+E VRRD + + L + HGD+ R+VK +
Sbjct: 1345 VI------DEEGKITTRGLEIVRRDWSEVAKETQARVLEAILRHGDVEEAVRIVKEVTEK 1398
Query: 1418 LAETSLPVHELFFTREYHGQ-AGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTC 1476
L++ +P +L + + Y+ A+ P IAKR+ + + R G +S++V
Sbjct: 1399 LSKYEVPPEKLVIHEQITRELKDYK--ATGPHVAIAKRLAARGIKV--RPGTVISYIVLK 1454
Query: 1477 GA 1478
G+
Sbjct: 1455 GS 1456
>UniRef50_Q4Z1C7 Cluster: Putative uncharacterized protein; n=5;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 1101
Score = 55.2 bits (127), Expect = 1e-05
Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 19/248 (7%)
Query: 413 DQNESENNGSPLSWH-DSFWDGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNE 471
D ++SEN LS++ D D + DG + L + L P+K+N+
Sbjct: 316 DNDKSENERKELSYNFDENEDDREVSFPDGEGCAEVIANIEAGIGSDLDVELDAPQKEND 375
Query: 472 RVNNPTNTDSNIDTSEIDEINVSRETADGDVCISELVRASKI-SKTSIENTEIKSEETFI 530
N + D ++ + EID N+ + D D + + SKI K S EN E++ E+ I
Sbjct: 376 SNNGDQDIDPSLKSYEIDINNIKIDNDDDD-NNNNINNLSKIEQKESFENEEVE-EQLGI 433
Query: 531 DAVSRITAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNNELEL---- 586
A+ T QN ++L NK + + + NK VD D+ E+ NN L
Sbjct: 434 GALK--TEFQNNIEL-NKDKDMNFDLFEIQKMSEENKIVDSDD-EINIEENNLLHAWYVK 489
Query: 587 SPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDYDKFKDTELK 646
+ N+ +++ +F D N L+E N I N+Y+K++ DK K + +
Sbjct: 490 KNENNKKNVLNV-----LFSDMQNVLPLEE--NLTVFWLFIQNQYKKKKKKDKMKKNDEE 542
Query: 647 LDVSVNEK 654
+D ++ K
Sbjct: 543 IDETLESK 550
>UniRef50_P26811 Cluster: DNA polymerase 1; n=9; Thermoprotei|Rep: DNA
polymerase 1 - Sulfolobus solfataricus
Length = 882
Score = 54.0 bits (124), Expect = 3e-05
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 1223 KKSMKMQNDEAVKKAMHSRQLGLKLIANVTYG-YTAANFSGRMPCVEVADSVVAKGRETL 1281
KK+ N E K Q +K+ N TYG + A F P V A+SV A GR +
Sbjct: 580 KKAKNPNNSEEQKLLYDVVQRAMKVFINATYGVFGAETFPLYAPAV--AESVTALGRYVI 637
Query: 1282 ERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLE 1317
+K RE V+YGDTDS+F+L P ++ LE
Sbjct: 638 TSTVKKAREE---GLTVLYGDTDSLFLLNPPKNSLE 670
>UniRef50_P21189 Cluster: DNA polymerase II; n=165; cellular
organisms|Rep: DNA polymerase II - Escherichia coli
(strain K12)
Length = 783
Score = 54.0 bits (124), Expect = 3e-05
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 30/249 (12%)
Query: 1231 DEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRE 1290
DEA ++ LK+I N YG + R +A S+ +G + + + L+
Sbjct: 478 DEAKRQGNKPLSQALKIIMNAFYGVLGTT-ACRFFDPRLASSITMRGHQIMRQTKALIEA 536
Query: 1291 NTTWNAKVIYGDTDSMFVLVPG-RSRLEAFEIGQQIADAVTA-------DNPPPVALKLE 1342
VIYGDTDS FV + G S EA +IG+ + V A AL+LE
Sbjct: 537 Q---GYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELE 593
Query: 1343 ------KVYQPCI----LQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLR 1392
+ P I +KKRY G + E D+++ + KG+ETVR D P + +
Sbjct: 594 YETHFCRFLMPTIRGADTGSKKRYAGLIQEG-DKQRMVF--KGLETVRTDWTPLAQQFQQ 650
Query: 1393 QSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIA 1452
+ +F + + V+ T+ +L L ++ R + Y+ + PP+ A
Sbjct: 651 ELYLRIFRN---EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQ--RNVPPHVRA 705
Query: 1453 KRIGMKDRR 1461
R+ ++ +
Sbjct: 706 ARLADEENQ 714
>UniRef50_A5DUM9 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 613
Score = 52.4 bits (120), Expect = 1e-04
Identities = 64/294 (21%), Positives = 119/294 (40%), Gaps = 27/294 (9%)
Query: 324 NLNEHEEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDSIMG 383
++N+ EE++ D I+DEN + S +Y +L+ E++E +HD++ + VE G
Sbjct: 128 DMNDDEEDNEDVEIIDENDIYVDSDGNEY---VLDIEEVEAEPEVHDLNDEIVEFYDAQG 184
Query: 384 TPANRDQEVDM---ELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQLD 440
+ ++ E + E D+ + RI DS D ES+++ S S S ++ D
Sbjct: 185 STSSSSSEEESSSEEEDNEDVIRIIRPDS--EDDTESDSSSSSSS-SSSSSSSSSSSSSD 241
Query: 441 GTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEIDEINVSRETADG 500
+ +D + ++ ++++S+ + +E+ + E A+
Sbjct: 242 SSSSSDSSSSSSSSDSSDSSDSSDSSDSSSSSDSSDSSSESSSEEDSDEELEIPEELAEE 301
Query: 501 DV--CISE-----LVRASKISKTSIENTEIKSEETFIDAVSRITAKQNIVKLMNKSEIYD 553
V I + L + S S E+TE+ SE FI+ + + ++ IY
Sbjct: 302 IVLEAIRQEFENGLASQEESSSDSDEDTELGSEPEFIE----VESDEDDTSDEEGLTIY- 356
Query: 554 LQNKFVPTAGPSNKPVDCDNTEMGNSSNNELELSPDGNELGIVSFYDASKVFDD 607
K GP DCD E E E +G + ++ D DD
Sbjct: 357 ---KDNSICGPCE---DCDCEEEEEEEEEEEEEDSEGEDYSVIDLTDDVANSDD 404
>UniRef50_Q8NKN7 Cluster: DNA polymerase; n=1; uncultured
crenarchaeote|Rep: DNA polymerase - uncultured
crenarchaeote
Length = 789
Score = 52.4 bits (120), Expect = 1e-04
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 24/181 (13%)
Query: 1245 LKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTD 1304
+K+I N TYG A + C+ VA++ A GR T + I+ E +VIYGDTD
Sbjct: 606 IKVILNATYGVMGAEIFP-LYCLPVAEATAAVGRMTTTKTIEKCNEE---KIEVIYGDTD 661
Query: 1305 SMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCIL-QTKKRYVGFMFES 1363
S+F+ P + L + + + L+++K Y+ + + KK Y+G +
Sbjct: 662 SLFLKNPSKEGLSGI--------SSWSKKELGIDLEIDKRYRYVVFSELKKNYLGVL--- 710
Query: 1364 PDQEKPTYEAKGIETVRRDGCPAGVKL----LRQSLCELFTHGDMSVVKRLVKATLSRLA 1419
E T + KG+ T ++ P ++ + L E+F+ D K +K + +A
Sbjct: 711 ---EDGTVDVKGL-TGKKSHTPPIIRQAFYDILNVLKEIFSEKDFERAKEKIKKIVQSIA 766
Query: 1420 E 1420
E
Sbjct: 767 E 767
>UniRef50_Q5UQR0 Cluster: DNA polymerase (EC 2.7.7.7) [Contains: Mimv
polB intein]; n=1; Acanthamoeba polyphaga mimivirus|Rep:
DNA polymerase (EC 2.7.7.7) [Contains: Mimv polB intein]
- Mimivirus
Length = 1740
Score = 52.4 bits (120), Expect = 1e-04
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 7/153 (4%)
Query: 1323 QQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFE-SPDQEKPTYEAKGIETVRR 1381
Q+ A + + P P ++ EK P IL KK+YVG +FE SPD K ++ GI RR
Sbjct: 1435 QRAAKLINQNVPKPQSIVYEKTLHPFILVAKKKYVGLLFEKSPD--KYFLKSMGIVLKRR 1492
Query: 1382 DGCPAGVKLLRQSLCE-LFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGY 1440
D P VK++ + + + + D+ K L +L P+ + ++ ++ Y
Sbjct: 1493 DNAPI-VKIVVGGIIDNILKNRDIDKAIEYTKIVLDKLMNGEYPMDKFIISKTL--KSRY 1549
Query: 1441 RPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWL 1473
+ ++ +A R+ ++D P+ R+ ++
Sbjct: 1550 KKPSTIAHKVLADRMAVRDPGNKPQINDRIPFV 1582
Score = 39.1 bits (87), Expect = 1.0
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 25 VLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNIAMKQATSS 84
V+++FG +D + CL + G P+FY+ P Q + Q+ + +K K
Sbjct: 34 VIQLFGRTEDDHDVCLKVTGYTPFFYVEIPKQWKQRQVDKFVEILKNKVQYHCKKNLDED 93
Query: 85 ---NQHVYKISLVKGLPFYGYHDKE 106
++ + K ++VK FY + +K+
Sbjct: 94 FDLSKSLIKYAMVKKHKFYNFRNKQ 118
Score = 38.3 bits (85), Expect = 1.7
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 1028 ESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLM 1087
+ K +R I +Y L +L KL+II + +A++ + + RG ++ SL+
Sbjct: 605 DPKKIRQI-AKYCLKDCKLVNLLLAKLEIIVNSVGMAKVCHVPLSYLFLRGQGVKIFSLV 663
Query: 1088 LRAARPLNLIALSPTIKQRSTMRA---PETLP--LIFEPESRFYSDPVIVLDFQSLYPSM 1142
+ R N L P ++++S ET + P+ Y P+ VLD+ SLYP+
Sbjct: 664 SKKCREKNF--LIPVLRRKSKDNEGDEDETYEGATVITPKPNVYLSPIGVLDYSSLYPNS 721
Query: 1143 M 1143
M
Sbjct: 722 M 722
>UniRef50_Q3ZMC0 Cluster: DNA polymerase; n=1; Crocidura russula
cytomegalovirus 1|Rep: DNA polymerase - Crocidura russula
cytomegalovirus 1
Length = 253
Score = 52.0 bits (119), Expect = 1e-04
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 1141 SMMIAYNYCFSTCI--GRVQNINGETAYEF-GAWRLRIPRSKLEALVKNSLIHWSPVGIG 1197
S+++A N C+ST + + +G+ E G+ +L R L V + H
Sbjct: 1 SIIMANNLCYSTLLLPPAAGDASGDDDDEGDGSGQLDEERDVLTVTVASGERH------R 54
Query: 1198 FVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTA 1257
FV+ VR +L +AV++SMK D + + QL LK+ N YG+T
Sbjct: 55 FVRRHVRPSILAELLTRWLAQRKAVRESMKRCEDPMRRLLLDKEQLALKVTCNSFYGFTG 114
Query: 1258 ANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTT 1293
G +PC+ +A SV GR+ L V + T
Sbjct: 115 V-ARGMLPCLAIAASVTKIGRDMLRATADYVHTHFT 149
>UniRef50_A7U6F1 Cluster: Putative B family DNA polymerase I; n=1;
Chrysochromulina ericina virus|Rep: Putative B family DNA
polymerase I - Chrysochromulina ericina virus
Length = 1623
Score = 51.6 bits (118), Expect = 2e-04
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 23/247 (9%)
Query: 1245 LKLIANVTYGYTAANFSGRMPCVEVADSV-VAKGRETLERAIKLVRENTTWNA----KVI 1299
+K I N+ N + V + +SV + ++ + L EN A +I
Sbjct: 1273 IKKIVNIQNSANIQNSANIQNSVNIQNSVNIQNSKDNQDYVYDLTTENHHHFAAGIGNMI 1332
Query: 1300 YGDTDSMFVL----------VPGRSRLE-AFEIGQQIADAVTADNPPPVALKLEKVYQPC 1348
+TDS+F + G+ LE E+ ++ T P L+ EK + P
Sbjct: 1333 VHNTDSVFFTFNLKDLDSKEIVGKKALEITIELAKKAGWLATMFLKSPHDLEYEKTFLPF 1392
Query: 1349 ILQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVK 1408
L +KKRYVG ++E D K + G+ RRD C A VK + ++ D V K
Sbjct: 1393 CLLSKKRYVGILYEE-DPNKGKRKEMGLVLKRRDNC-AQVKDVYGGAIDILMK-DQVVHK 1449
Query: 1409 RL--VKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRT 1466
+ VK +L + + + +L T+ ++ Y+ N +A RIG +D P+
Sbjct: 1450 AVDFVKHSLQDVIDEKISQQKLIITKSL--RSYYKNPKQIAHNVLAIRIGERDPGNKPKP 1507
Query: 1467 GWRVSWL 1473
G R+ ++
Sbjct: 1508 GDRMEFI 1514
Score = 41.5 bits (93), Expect = 0.19
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 1205 RGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRM 1264
+ +LP ++ K+ MK + D ++ + RQL +K+ AN YG A S
Sbjct: 855 KAILPSILDELLGARKSTKRQMKNETDPFMQNVLDKRQLSIKITANSLYGQAGAKTS-TF 913
Query: 1265 PCVEVADSVVAKGRETLERAIKLV 1288
++A S A GR+ L A +L+
Sbjct: 914 YDKDIAASTTATGRKLLIYAKELI 937
>UniRef50_Q8D8C5 Cluster: DNA polymerase; n=9;
Gammaproteobacteria|Rep: DNA polymerase - Vibrio
vulnificus
Length = 789
Score = 51.6 bits (118), Expect = 2e-04
Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 41/298 (13%)
Query: 1227 KMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIK 1286
K ND+A +A +K+I N YG ++ R +A S+ +G E +++
Sbjct: 486 KRNNDKAFSQA-------IKIIMNSFYGVLGSS-GCRFFDTRLASSITMRGHEIMKQTKL 537
Query: 1287 LVRENTTWNAKVIYGDTDSMFVLVPGR-SRLEAFEIGQQIADAVTA----------DNPP 1335
L+ + +VIYGDTDS FV + GR + EA IG+Q+ + +
Sbjct: 538 LIEQQ---GYQVIYGDTDSTFVSLNGRFEQPEADAIGRQLVSLINQWWKQHLEQEFNLNS 594
Query: 1336 PVALKLEKVYQPCILQT--------KKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAG 1387
+ L+ E Y+ ++ T KKRY G + + +E+ + KG+E+ R D P
Sbjct: 595 ILELEYETHYRKFLMPTIRGAETGSKKRYAG-LIQQGSEERIVF--KGLESARTDWTPLA 651
Query: 1388 VKLLRQSLCELFTHGD-MSVVKRLVKATLSRLAETSLPVHELFFTR---EYHGQAGYRPG 1443
+ Q +F D V+ +V+ T + + L V++ R +Y +
Sbjct: 652 QRFQHQLYMMIFHDQDPTDYVREMVEQTRAGAFDDEL-VYQKRLRRKLSDYQKNVPPQVR 710
Query: 1444 ASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRP 1501
A+ +EI R+G R + R+ +L+T P + + + D+ L+P
Sbjct: 711 AARMADEINARLG---RPLQYQNRARIEYLITLNGPEPKEYQSSAIDYQHYVDKQLKP 765
>UniRef50_Q1DBV1 Cluster: DNA polymerase; n=3; Bacteria|Rep: DNA
polymerase - Myxococcus xanthus (strain DK 1622)
Length = 804
Score = 51.2 bits (117), Expect = 2e-04
Identities = 51/184 (27%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Query: 1245 LKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTD 1304
+K++ N YGY A R V A+ V +GRE L L RE ++ DTD
Sbjct: 493 MKIVVNSAYGYLGAVGLTRFSDVHAANEVTRQGREVLG---LLCRELARRGVTLLEADTD 549
Query: 1305 SMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESP 1364
++ VP R EA E +++ V A PP V L+ + Y + K Y ++ P
Sbjct: 550 GVYFAVPEDWR-EADE--RRVVSEVAALLPPRVQLEFDGRYAAMLSHEPKNYALQPYDGP 606
Query: 1365 DQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLP 1424
+G+ P G LR++L L D+ V+ + AT+ L LP
Sbjct: 607 ------LVLRGVAFRSSRAEPFGEAFLRRALRCLLAE-DIPGVREVYVATVMALRRRELP 659
Query: 1425 VHEL 1428
E+
Sbjct: 660 TPEV 663
>UniRef50_A0KYI7 Cluster: DNA polymerase; n=17; Shewanella|Rep: DNA
polymerase - Shewanella sp. (strain ANA-3)
Length = 810
Score = 50.8 bits (116), Expect = 3e-04
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 38/280 (13%)
Query: 1224 KSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCV----EVADSVVAKGRE 1279
+++ Q ++A ++A +K+I N YG G CV ++A S+ +G +
Sbjct: 499 QNLSEQREKAKREANAPLSQAIKIIMNSLYGVL-----GSQGCVFHDAKLASSITMRGHQ 553
Query: 1280 TLERAIKLVRENTTWNAKVIYGDTDSMFV-LVPGRSRLEAFEIGQQIADAVTADNPPPVA 1338
+++ + E +VIYGDTDS FV L P + +G+QIA + +A
Sbjct: 554 IMKQTRAWIEE---MGYQVIYGDTDSTFVYLGPEPDLSDINALGKQIAARMNQQWQSKIA 610
Query: 1339 ----------LKLEKVYQPCILQT--------KKRYVGFMFESPDQEKPTYEAKGIETVR 1380
L+ E+ Y+ + T KKRYVG + + T+ KG+E VR
Sbjct: 611 QEFQLESFLELQFERHYEQFFMPTLRGSEEGSKKRYVGAWRNNSGALEITF--KGMEQVR 668
Query: 1381 RDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGY 1440
D P K+ + +F D+S V L + EL F++
Sbjct: 669 SDWSPLARKVQAELYERMFNQRDISGYLADVIGEL----QAGKRDDELVFSKRMRRNLDE 724
Query: 1441 RPGASAPPNEIAKRI-GMKDRRAIPRTGWRVSWLVTCGAP 1479
S+P ++A+++ + + + + G ++ +++T P
Sbjct: 725 YTAKSSPHVKVARQLCELTGKSSFGKRGAQIDYVITVNGP 764
>UniRef50_A7I7B5 Cluster: DNA polymerase B region; n=1; Candidatus
Methanoregula boonei 6A8|Rep: DNA polymerase B region -
Methanoregula boonei (strain 6A8)
Length = 821
Score = 50.0 bits (114), Expect = 5e-04
Identities = 62/245 (25%), Positives = 102/245 (41%), Gaps = 31/245 (12%)
Query: 907 NEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLD--VLKDLSRITEKNRQ 964
NE + E + DPD++ G+ Y+ R E LGL +L L +TE+N
Sbjct: 234 NEASMLREFGAYIARRDPDVLSGWNFVDFDMPYITGRMEKLGLSPVLLARLPGMTERNAV 293
Query: 965 KRWMKNESDYEGRIIGRVIFNVWRLFR--HELALSSYSFENCMYEVLNERVPSYSYAQLS 1022
+ GR +F++ ++ H SY + E + ER Y+ +S
Sbjct: 294 R--------------GRALFDLLTGYKKMHSTLKESYRLDAVAEEEVGERKVRYT-GTIS 338
Query: 1023 DWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFR 1082
D W + +L VEY + V + +K I++ E+AR G + L+ S
Sbjct: 339 DLWRKQPALL----VEYNFKDVELCVAIDRKDSIVSFYREIARYVGCPLDKTLNSSSV-- 392
Query: 1083 VESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSM 1142
++ +LR A ++ A +FEP S+ + V+VLD +SLYP
Sbjct: 393 IDVYILRKAHGKYILPSKGFANAEEFEGAT-----VFEP-SKGVRENVVVLDLKSLYPMA 446
Query: 1143 MIAYN 1147
M+ N
Sbjct: 447 MMTIN 451
Score = 48.0 bits (109), Expect = 0.002
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 18/177 (10%)
Query: 1245 LKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTD 1304
LK+I N YG + R+ E+ +V + GR +E ++ + KVIYGDTD
Sbjct: 517 LKVIMNTYYGVSGYT-RFRLFDREIGAAVTSVGRAIIEHTRHVIEQE---GYKVIYGDTD 572
Query: 1305 SMFVLVPGRSRLEAFEIG-----------QQIADAVTADNPPPVALKLEKVYQPCI-LQT 1352
S V +P R + E Q A V + ++K EK+Y
Sbjct: 573 SCMVQIPPLDREKTIETARTLEKKLNTSYQDFARNVLNADTHYFSIKFEKIYARFFQAGK 632
Query: 1353 KKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHG-DMSVVK 1408
KKRY G + +E + G E +RR P K+++ + E G D + +K
Sbjct: 633 KKRYAGRLVWKEGKEADQIDIVGFE-IRRSDTPQITKIVQSKVMESILAGADFAEIK 688
>UniRef50_UPI00006D00EC Cluster: hypothetical protein TTHERM_00823790;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00823790 - Tetrahymena thermophila SB210
Length = 2822
Score = 49.6 bits (113), Expect = 7e-04
Identities = 121/661 (18%), Positives = 255/661 (38%), Gaps = 49/661 (7%)
Query: 208 INRQRIGKGDGIENPGLEEVWN-QELERRKQL-NMSLASKSLSQGLTSLKQVETDSHYKF 265
IN+ + + + I N ++E+ N QE+++ Q N SK T + ++H
Sbjct: 1480 INQTKDNQQEQIVNSKMQEIDNNQEIDQSHQSQNDQFFSK------TQTENASENNHNTQ 1533
Query: 266 ENIFAVKLSNKIDKPVLLEHAYYPAETLGDTQLFKAVDV----SIHLPSKDLDLTLNRTT 321
N L ++ ++LE T + +D+ S H D+ L N
Sbjct: 1534 SNNDQSMLEQNQEEKIILEEEEQNINTENQNKQEIQIDITDQDSSHQKENDIQLITNVNL 1593
Query: 322 KMNLNEHEEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDSI 381
+ LN+ ++ + T D L + Q + + +D + + + ++ E+ I
Sbjct: 1594 EDTLNQTKQYEHQNTTQDN---LQEEIHQQLNNNIQEIDDNLEVSQNNQQEDEKQLEEEI 1650
Query: 382 MGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQLDG 441
++ EL D ++ + + + + + ++ + D N ++
Sbjct: 1651 QQIQEQNCSQIQQELIDMNQTKDNQQEQIINSKMQEIDDNQEI---DLKHQSQNNQLIEE 1707
Query: 442 TFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEIDEINVSRETADGD 501
H +++ +++N +N TN ++ S I E N S+ + +
Sbjct: 1708 KEQQQHLQELNSSQIQKELADMNQNEEQNI-INELTNHKQQLEVS-IQEFNQSQLFENQN 1765
Query: 502 VCISELVRASKISKTSIENTEI--KSEETFIDAVSRITAKQ---NIVKLMNKSEIYDLQN 556
E A KIS I EI S++T + I +++ N ++ N+ +I L N
Sbjct: 1766 --FDENQTAQKISDEEINQNEILQNSQQTQDMQIITINSEEEQINQKQIQNQEDI--LHN 1821
Query: 557 KFVPTAGPSNKPVDCDN-TEMGNSS--NNELELSPDGNELGIVSFYDASKVFDDSFNQTF 613
+ + + N TE+ SS N+L+ N+ + D + D +
Sbjct: 1822 LHIEQEHQQIQTENIPNETEINKSSLDENKLQTEEQDNDNQETTQNDRLNLNDIEYTHQS 1881
Query: 614 LQEQTNCDDCSDIIANEYEKQEDYDKFKDTELKLDVSVNEKLDTGIKIFTPTVKP-PTKN 672
L + DD ++ Y + E + + + K++ NE+ D I I P K
Sbjct: 1882 LNNEIIKDDTTE---QHYVQSELLSQIQYNQQKIEE--NEQKDQVILIQQVNQNSLPLKE 1936
Query: 673 EMETKYKIPKTKQVQPFFSDYKDV---GDKVEIGQLVLKLHSNLSRDQKPFEKVLETESI 729
+ + +I + Q+Q + D+ + ++I QL L ++Q+ +K + I
Sbjct: 1937 SQQEQLEINEQIQIQDQKQNMADIIVAQENIQIEQL--NEQEELIKEQQNIDKNI----I 1990
Query: 730 ENWRQLLFLQKYATQDDYKPDT-LRTLLAGNSRYVIQPVVRPPTSEQVKKWINEQKALQL 788
N + + Q + +T L T+ + N ++ E + + +QK QL
Sbjct: 1991 INEQNNIIDSNQQDQYEILQETQLNTMCSANDIQILHQNEHLMQDENITQENQDQKLTQL 2050
Query: 789 L-SQFSSEQAISKNMDDFNNSQALGLNEDEINSSIVSIENCESADFLTSMVIEVHTSVRG 847
+ SQF ++ N D ++ QA ++ N+S E + + + + + S++
Sbjct: 2051 IDSQFQGQEIEKMNDDKTDDYQATNSIQEIQNNSFDLKEGDQQIEQTLDQLCDTNKSIQN 2110
Query: 848 D 848
+
Sbjct: 2111 E 2111
>UniRef50_Q8KA84 Cluster: DNA polymerase family B protein; n=11;
Chlorobiaceae|Rep: DNA polymerase family B protein -
Chlorobium tepidum
Length = 806
Score = 49.2 bits (112), Expect = 0.001
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 1227 KMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIK 1286
K + + ++ + Q K+I N YGY +G E AD V KG+E A K
Sbjct: 481 KERGNASLSYNFDAMQSSFKIIINAMYGYLGFG-NGMFNDFEEADRVTTKGQEI---AKK 536
Query: 1287 LVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQ 1346
++RE + AKVI DTD +F++ P E E +Q+ V++ P + + + ++
Sbjct: 537 MIREFESRGAKVIEVDTDGIFLVPPPYVVTEEEE--RQLVCEVSSTMPQGIRIGFDGRFK 594
Query: 1347 PCILQTKKRY 1356
I KK Y
Sbjct: 595 KMISYMKKNY 604
>UniRef50_A4BE79 Cluster: DNA polymerase; n=1; Reinekea sp.
MED297|Rep: DNA polymerase - Reinekea sp. MED297
Length = 773
Score = 48.8 bits (111), Expect = 0.001
Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 32/243 (13%)
Query: 1231 DEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRE 1290
D+A ++ +K+I N YG + R +A S+ +G + L+R+ + +
Sbjct: 477 DQAKREQNAPMSQAIKIIMNSFYGVLGSPLC-RFFDPRLASSITMRGHDILQRSSEFIES 535
Query: 1291 NTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVT------ADNPPPVALKLEKV 1344
VIYGDTDS+F + R+ E +G+++AD + +A +LE
Sbjct: 536 Q---GYPVIYGDTDSLF--IHARNHAEPKRLGRELADQLNEWWRSLLQESYGLASQLEME 590
Query: 1345 YQ--------PCILQT----KKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLR 1392
++ P I T KKRY G++ D E P KG+E VR D P
Sbjct: 591 FETHYSRFVMPTIRGTDKGSKKRYAGWI--EGDGE-PRLVFKGLEAVRSDWTPMAKAFQH 647
Query: 1393 QSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIA 1452
+ +F D ++++++T+ +L L EL + R Q + APP+ A
Sbjct: 648 RLYRCVFQEED---YRQVIRSTVQQLHAGELDA-ELVYRRRLRRQID-QYEKQAPPHVQA 702
Query: 1453 KRI 1455
R+
Sbjct: 703 ARL 705
>UniRef50_O74046 Cluster: Archael family B DNA polymerase; n=8;
Crenarchaeota|Rep: Archael family B DNA polymerase -
Cenarchaeum symbiosum
Length = 845
Score = 48.4 bits (110), Expect = 0.002
Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 57/324 (17%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIP 1176
L+ EPE + D V V+DF SLYPS++ +V+N++ ET R P
Sbjct: 468 LVVEPEEGIHFD-VTVMDFASLYPSII------------KVRNLSYETV------RCVHP 508
Query: 1177 RSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKK 1236
+ + + HW + + ++ +++ KS + ++ +
Sbjct: 509 ECRKNTIPDTN--HW----VCTKNNGLTSMIIGSLRDLRVNYYKSLSKSQSITEEQRQQY 562
Query: 1237 AMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNA 1296
+ S+ LK++ N +YG A + + A++ A GR + + I +
Sbjct: 563 TVISQ--ALKVVLNASYGVMGAEIFP-LYFLPAAEATTAVGRYIIMQTISHCEQ---MGV 616
Query: 1297 KVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVT-ADNPPPVALKLEKVYQPCILQT-KK 1354
KV+YGDTDS+F+ P +QI D V A V L+++K Y+ +L KK
Sbjct: 617 KVLYGDTDSLFIKNPEE---------RQIHDIVEHAKKEHGVELEVDKEYRYVVLSNRKK 667
Query: 1355 RYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELF----THGDMSVVK-- 1408
Y G + + KG+ T ++ P +K L SL ++ T + K
Sbjct: 668 NYFGV------TKSGKVDVKGL-TGKKSHTPPFIKELFYSLLDILSAVQTEDEFESAKLK 720
Query: 1409 --RLVKATLSRLAETSLPVHELFF 1430
+ + A+ RL E +P+ +L F
Sbjct: 721 ISKAIAASGKRLEERGVPLADLAF 744
>UniRef50_P95979 Cluster: DNA polymerase 3; n=4; Sulfolobus|Rep: DNA
polymerase 3 - Sulfolobus solfataricus
Length = 764
Score = 48.4 bits (110), Expect = 0.002
Identities = 56/249 (22%), Positives = 113/249 (45%), Gaps = 15/249 (6%)
Query: 907 NEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKR 966
++++ I + + +DPDI+ Y+ ++ W Y+ ERA LG+ + D+ R K +
Sbjct: 210 DDLKIIRRFVDYILNYDPDIIFVYDSDLLPWKYITERASSLGVKI--DIGR---KIGSEV 264
Query: 967 WMKNESDYEGRIIGRVIFNVWRLFRHELALSSYS-FENCMYEVLNERVPSYSYAQLSDWW 1025
+ Y I GR+ ++ L +E +L + Y ++ S+ + ++S +W
Sbjct: 265 SVGTYGHYS--ISGRLNVDLTGLLVNERSLGHVDLIDVSNYLGISPSRYSFKWYEISRYW 322
Query: 1026 CDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVES 1085
+E R I EY + + ++ +L +++ SEL ++ GL ++ R+E+
Sbjct: 323 DNEKN--RRIIREYSIEN-ARSIYLLGNY-LLSTYSELVKIVGLPLDKLSVASWGNRIET 378
Query: 1086 LMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIA 1145
++R A L P + +I +P+ Y+D V VLD S+Y ++
Sbjct: 379 SLIRTATKSG--ELIPIRMDNPNRPSKIKKNIIIQPKVGIYTD-VYVLDISSVYSLVIRK 435
Query: 1146 YNYCFSTCI 1154
+N T +
Sbjct: 436 FNIAPDTLV 444
>UniRef50_UPI0000035EE6 Cluster: UPI0000035EE6 related cluster; n=1;
unknown|Rep: UPI0000035EE6 UniRef100 entry - unknown
Length = 522
Score = 48.0 bits (109), Expect = 0.002
Identities = 59/237 (24%), Positives = 96/237 (40%), Gaps = 29/237 (12%)
Query: 1185 KNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLG 1244
+N ++ +P GI + GVLP + +K K E H RQ
Sbjct: 107 RNIIMVPNPSGICWFYRKEPVGVLPSIIREIFTRRKEERKLFK----ETGNMEHHFRQWA 162
Query: 1245 LKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTD 1304
LK++ N YG N S M C+ +A+SV A GR ++ I +R+ + IY TD
Sbjct: 163 LKIMMNSMYG-IFGNRSVYMGCLPIAESVTAAGRMSIRSVISQIRD------RFIYSHTD 215
Query: 1305 SMFVLV--------PG--RSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKK 1354
S+FV G + L +F I + + A + LK E V++ +++
Sbjct: 216 SIFVKAFTDDPVAEAGELQEHLNSF-INDYMENNFNAREDFKLELKQEFVFKSILIKEIN 274
Query: 1355 RYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLV 1411
RY + + E KGIE + P VK + + + D+ V+ +
Sbjct: 275 RYFAVTVDGKE------EMKGIEVI-NSSVPEIVKKYFRGYLKYISQPDIDVISATI 324
>UniRef50_A2ERL6 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion
protein, putative - Trichomonas vaginalis G3
Length = 2832
Score = 48.0 bits (109), Expect = 0.002
Identities = 89/490 (18%), Positives = 211/490 (43%), Gaps = 30/490 (6%)
Query: 220 ENPGLE-EVWNQELERRK-QLNMSLASKSLSQGLTSLKQVETDSHYKFENIFAVKLSNKI 277
EN L+ E+ + E RK N SK ++ +KQ++ ++ + + ++
Sbjct: 1040 ENDDLQKEILELQNENRKISSNYEKISKENNRIEMEMKQIKDENESNKQKLVDNTKKHEE 1099
Query: 278 DKPVLLEHAYYPAETL-GDTQLFKAVDVSIHLPSKDLDLTLNRTTKMNLNEHEEEDLDTT 336
+K L+ +A + G T+ ++ +I L + N +++ E+E + L
Sbjct: 1100 EKMNLINNAKSDKSKIDGLTKDISMLNSNIKLLQDENSKLDNENSQL---ENEIKKLTED 1156
Query: 337 IVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQ--RVEEDSIMGTPANRDQEVDM 394
+ +N +N + +L + N + + ++L ++Q + +D I + ++++++M
Sbjct: 1157 LQKQNEKINDNQNLLQNVTNENKKLKDKNELLFKENEQIKNLMQDKINENNSLKEKQIEM 1216
Query: 395 ELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQLDGTFDNDHXXXXXXX 454
E +D ++ N++ + E EN+ ++ + A + Q + N++
Sbjct: 1217 E-NDLNTEKL-NNERLVGRLKEIENHNKSKK-DNTAKENAKLTQNNKALANENFELKQKV 1273
Query: 455 XXXXLQLGLSRPKKKNERVNNP-TNTDSNI--DTSEIDEINVSRETADGDV-CISELVRA 510
L LS K K +++++ + ++ + + +E +I E+ + +V +++LV
Sbjct: 1274 AN--LDQELSDVKNKFDKMSSQISESEKEVQQNAAEFRQIKAKNESLNKEVQFLNDLVTN 1331
Query: 511 SKISKTSIENTEIKSEETFIDAVSRITAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVD 570
K + N + + TF + + I+ + +K N E +N+ + K
Sbjct: 1332 LKQQNDDLRNKKEELNTTFSEDIDNISNELREIKTQN--EFLRKENEEMKNQSQLTK--- 1386
Query: 571 CDNTEMGNSSNNELELSPDG----NELGIVSFYDASKVFDDSFN-QTFLQEQTNCDDCSD 625
DN ++ + N+ E++ NEL ++ ++ N Q QE+ D D
Sbjct: 1387 ADNDKLKEENQNQKEINTKSLMKINELEKLNKQINDEMAKIQNNLQNLTQEKEENDSKQD 1446
Query: 626 IIANEYEKQEDYDKFKDTELKLDVSVNEKLDTGIKIFTPTVKPPTKNEMETKYKIPKTKQ 685
I EYE++ + + ++ + + V EK + + +F +++ TK + + K+ K+
Sbjct: 1447 EIIKEYEQENETLRSENQNFETKIKVLEK-ENKLNVF--SLQKVTKEKEDLAEKLKNQKE 1503
Query: 686 VQPFFSDYKD 695
V K+
Sbjct: 1504 VNETLEKAKE 1513
>UniRef50_A7D4V7 Cluster: DNA polymerase B region; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: DNA polymerase B region -
Halorubrum lacusprofundi ATCC 49239
Length = 929
Score = 48.0 bits (109), Expect = 0.002
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 19/195 (9%)
Query: 1223 KKSMKMQNDEAVKK-AMHSRQLG-LKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRET 1280
KK ++ +D + + RQ G +K+I N YG T + R+ E A +V A GRE
Sbjct: 575 KKGLRNDHDPGTEPYEQYDRQQGAVKVIMNSLYGVTGWD-RFRLYDKEGAAAVTATGREV 633
Query: 1281 LERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTA--------- 1331
++ + E N +V YGDTDS+ + + S+ EA E +I D +
Sbjct: 634 IDFTEEAANE---LNYQVSYGDTDSVMLSLSNMSKEEAIETSFEIEDHINERYDDFARDE 690
Query: 1332 --DNPPPVALKLEKVYQPCI-LQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGV 1388
+ ++ EK+Y+ KKRY G + ++ + G E R D
Sbjct: 691 LNADVHRFQIEFEKLYRRFFQAGKKKRYAGHIIWKEGKDVDDIDITGFEYKRSDIAQI-T 749
Query: 1389 KLLRQSLCELFTHGD 1403
K ++Q++ E GD
Sbjct: 750 KEVQQNVIETIVTGD 764
Score = 45.2 bits (102), Expect = 0.015
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 19/243 (7%)
Query: 908 EIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQKRW 967
E +D I+ ++ DPD++ G+ E YVL+R E+L DLS + W
Sbjct: 302 EAAMLDAFIEYIDDTDPDLLTGWNFEDFDAPYVLDRLEVLDDGSQYDLSIDRLSRIGEVW 361
Query: 968 MKNESDYEG-RIIGRVIFNVWRLFRHEL--ALSSYSFENCMYEVLNERVPSYSYAQLSDW 1024
S + G I GRV+F++ ++ + L SY + L Y+ + D
Sbjct: 362 ---RSGWGGPDIKGRVVFDLLYAYKRTMFTELESYRLDAVGERELGVGKERYT-GDIGDL 417
Query: 1025 WCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVE 1084
W + + L +EY + + V + +K D+I E+ G + + + G V+
Sbjct: 418 WEQDPERL----LEYSIRDVELCVEIDRKQDVIAFWDEVRTFVGCKIEDAPTPGD--TVD 471
Query: 1085 SLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPSMMI 1144
+L A AL PT Q+ + +F+P + + V V D +SLYP M+
Sbjct: 472 MYVLHKA--FGKFAL-PTKGQQESEEFEG--GAVFDPITG-VKEMVTVQDLKSLYPMCMV 525
Query: 1145 AYN 1147
N
Sbjct: 526 TIN 528
Score = 37.1 bits (82), Expect = 4.0
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 5 TAGLDVTYSEF--RGTDIKQVPVLRIFG--PAKDGYKACLHIH--GVFPYFYIPCPTQNP 58
T L +T ++ G + PV+ +FG P DG A H+ GV PYFY+P N
Sbjct: 63 TVELMITQIDYAVEGYGSDEYPVVHVFGRRPVDDGDDAVEHLRVLGVEPYFYVPTADLNG 122
Query: 59 EPQLLYQI 66
+P Y +
Sbjct: 123 DPTEEYDV 130
>UniRef50_A6N4C5 Cluster: DNA-dependent DNA polymerase; n=1;
Thamnophis sauritus erythrocytic virus|Rep: DNA-dependent
DNA polymerase - Thamnophis sauritus erythrocytic virus
Length = 209
Score = 47.6 bits (108), Expect = 0.003
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 1198 FVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTA 1257
F+K+S + GV+P + +K +K + D K + +QL K+ AN YG
Sbjct: 111 FLKSSEKVGVIPTIIKNLLLQRKKIKTQIKTEKDSLFKTILDKQQLAYKVSANSMYGAMG 170
Query: 1258 ANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVI 1299
G +P + A ++ GRE +++++K++ + + KVI
Sbjct: 171 VR-QGYLPYMPGAMTITFCGREAIKKSLKII--ESQFEGKVI 209
>UniRef50_Q54G05 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1492
Score = 47.6 bits (108), Expect = 0.003
Identities = 106/542 (19%), Positives = 223/542 (41%), Gaps = 55/542 (10%)
Query: 320 TTKMNLNEHEEEDLDTTIVDENLVL-NSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEE 378
+ ++N +++ ++L +D+ + NS+ S Q+ LN EL++ L+D++Q
Sbjct: 393 SNQLNEKDNKIQELSKQSIDKQKEIENSTSSSDQLQLKLNDISNELLEKLNDINQL---- 448
Query: 379 DSIMGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQ 438
+ + N+ E++ +L++ E I D+ + +E++ L + Q
Sbjct: 449 SNKLQDKENQILEINNKLNEKENQLISKDNQLNQLIENNESSSDELK--------LKLNQ 500
Query: 439 L-DGTFDNDHXXXXXXXXXXXLQLGLSRPKKK-NERVNNPTNTDSNIDTSEIDEINVSRE 496
L D + D LQ L+ + K NE + N + S DE+ +
Sbjct: 501 LSDELQEKDEKLLNNQSVINELQSNLNENQNKINELIEN--------NQSSSDELKLKLN 552
Query: 497 TADGDVCISELVRASKISKTSIENTEIKSEETFIDAVSRITAKQNIVKLM---NKSEIYD 553
+S+ ++ S+E++ I+ +E + KQ+ + + N+S +
Sbjct: 553 Q------LSDKLQEKDEKLKSLESSIIERDEKIDQLQDNLNEKQDKINELVENNESSSDE 606
Query: 554 LQNKFVPTAGPSNKPVDCDNTEMGNSSN-NELELSPDGNELGIVSFYDASKVFDDSFNQT 612
LQ+K + S++ + D + N S NEL+ + + N+ I + ++ D N
Sbjct: 607 LQSKLIQL---SDQLQEKDEKLLNNQSIINELQSNLNENQNKINELIENNQSSSDELNSK 663
Query: 613 FLQEQTNCDDCSDIIAN-EYEKQEDYDKFKDTELKLDVSVNE---KLDTGIKIFTPTVKP 668
++ D ++ + + E E+ DK V+VNE KL+ ++
Sbjct: 664 LIKLSDELKDKNENVRSLETSIIENQDKLDQLIQSNQVTVNELQSKLNEKEININQLIEN 723
Query: 669 PTKNEMETKYKI-PKTKQVQPFFSDYKDVGDKVEIGQLVLKLHSNLSRDQKPFEKVLE-- 725
+ E + K+ K ++ + + D E+ + + H +S Q +++E
Sbjct: 724 NQSSLDELQSKLNEKQNEINQLIENNQSSSD--ELQSKLNEKHQEISELQSKLNELIENN 781
Query: 726 -TESIENWRQLLFLQKYATQDDYKPDTLRTLLAGNSRYVIQPVVRPPTS-EQVKKWINEQ 783
+ S E +L+ L + D K +L +++ N ++Q S ++++ +NE+
Sbjct: 782 ESSSDELQSKLIQLSDELKEKDEKLKSLDSIIIENQEKLVQLTKSNQDSLDELQSKLNEK 841
Query: 784 KALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSSIVSIENCESADFLTSMVIEVHT 843
Q + I N N Q+ LNE + +++ N S+D L S + E H
Sbjct: 842 -------QNEINELIENNQSSSNELQSK-LNEKQNEINLLIENNQSSSDELQSKLNEKHQ 893
Query: 844 SV 845
+
Sbjct: 894 EI 895
>UniRef50_UPI0000F1FBE9 Cluster: PREDICTED: similar to erythrocyte
membrane-associated giant protein antigen 332; n=1;
Danio rerio|Rep: PREDICTED: similar to erythrocyte
membrane-associated giant protein antigen 332 - Danio
rerio
Length = 840
Score = 46.8 bits (106), Expect = 0.005
Identities = 87/432 (20%), Positives = 175/432 (40%), Gaps = 36/432 (8%)
Query: 266 ENIFAVKLSNKIDKPVL--------LEHAYYPAETLGDTQLFKAVDVSIHLPSKDLDLTL 317
E+ F KL + KPV L ++Y Q+ +D ++ PS + T
Sbjct: 2 ESFFRQKLGLSLQKPVSSYQFKLPELSSSFYSIADEPFPQVSGFLDETVS-PSFISNETA 60
Query: 318 NRTTKMNLNEHEEEDLDTTIVDENLVLNSSMSLQ--YSQVLLNSEDMELIDMLHDMDQQR 375
T +E++ ++ + +++ LN S+++Q ++ ++ ++ + + +
Sbjct: 61 LSTPSCTPSENQRKNKQENVTNDS-GLNCSLAVQSHFTSGNASNRSVQTEKDITSVTDCK 119
Query: 376 VEEDSIMGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGAN 435
V+ D++ A + + + + F+ V D E +NG ++ D N
Sbjct: 120 VDVDAVPSLQALASADTSGLMSEDLKNSTFD---VTQDLKEPSDNGVNVTV-----DLQN 171
Query: 436 IPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEIDEI---N 492
I + +GTFD H L K+KN N ++ DT EI + N
Sbjct: 172 IKEKNGTFDLTHNVKDPSDSGTTATADLPNIKEKNSTFNMTQDSKEQPDTGEIKTVELQN 231
Query: 493 VSRETADGDVCISELVRASKISKTSIENTEIKSEE-TF---IDAVSRITAKQN-IVKLMN 547
+ + + D V++ + +++ IK + TF D+ R A N V L N
Sbjct: 232 IKEKNSTFDFPKDSKVQSEGSAAVTVDLQNIKDKNGTFNFTEDSNERSDAHTNTTVDLRN 291
Query: 548 ---KSEIYDLQNKFVPTAGP-SNKPVDCDNTEMGNSSNNELELSPDGNELGIVSFYDASK 603
K++ ++L + + +N+ VD + + N + N E S + ++ + D
Sbjct: 292 IKDKNDTFNLTQELKEQSNTGTNRTVDQQSIKEKNGTFNFTEDSKEQSDSRTNTTVDLQN 351
Query: 604 VFDDSFNQTFLQE-QTNCDDCSDI---IANEYEKQEDYDKFKDTELKLDVSVNEKLDTGI 659
+ + + F Q+ + CD ++ + N EK +D +D++ ++ N +D I
Sbjct: 352 IKEKNGTFNFTQDSKERCDLATNTTVDLQNIKEKNSTFDLTQDSKDHCNLGANMTVDVQI 411
Query: 660 KIFTPTVKPPTK 671
K T V P K
Sbjct: 412 KDNTFNVTPEYK 423
>UniRef50_A3DMW2 Cluster: DNA polymerase; n=1; Staphylothermus marinus
F1|Rep: DNA polymerase - Staphylothermus marinus (strain
ATCC 43588 / DSM 3639 / F1)
Length = 855
Score = 46.8 bits (106), Expect = 0.005
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 1242 QLGLKLIANVTYG-YTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIY 1300
Q +K+ N +YG + A NF P V A+SV A GR++L +++++ KV+Y
Sbjct: 578 QKAMKVFINASYGVFGAENFPLYSPAV--AESVTALGRKSL---YSILKKSAEIGMKVVY 632
Query: 1301 GDTDSMFVLVPGRSRL 1316
GDTDS+F+ P +L
Sbjct: 633 GDTDSIFLWAPTNEQL 648
>UniRef50_A7U6F3 Cluster: Putative B family DNA polymerase I; n=1;
Phaeocystis pouchetii virus|Rep: Putative B family DNA
polymerase I - Phaeocystis pouchetii virus
Length = 1045
Score = 46.4 bits (105), Expect = 0.007
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 1027 DESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESL 1086
++S + R+ +Y L + +L K+DII E++ L + +L RG +++S
Sbjct: 674 NKSDIDRFTVGKYCLGDCDNVIWLLIKVDIITDKVEMSNLCDVPLNFLLQRGQGIKLQSY 733
Query: 1087 MLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFY-SDPVIVLDFQSLYPSMMIA 1145
+ + N L P +++ E +F P++ Y DPV +D+ SLYPS MI+
Sbjct: 734 VSKKCGEKN--TLMPIVEKNLNDGGYEGAH-VFNPKTGLYLEDPVACVDYSSLYPSSMIS 790
Query: 1146 YN 1147
N
Sbjct: 791 EN 792
Score = 40.7 bits (91), Expect = 0.33
Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 12/115 (10%)
Query: 1205 RGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSG-- 1262
+ ++P +A KK M + D + RQL +K+ AN YG A S
Sbjct: 871 KAIMPAILEDLLSARKATKKLMGKEEDPFKQNIYDKRQLSIKVTANSLYGQCGARTSAFY 930
Query: 1263 ----RMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKV------IYGDTDSMF 1307
C + ++ G++ +E V + KV +YGDTDS+F
Sbjct: 931 EKDVAASCTAIGRKLLFYGKDVIEGCYNNVEITLSDGVKVVTKAECVYGDTDSVF 985
>UniRef50_Q5MY93 Cluster: Rhoptry associated membrane antigen; n=4;
Plasmodium (Vinckeia)|Rep: Rhoptry associated membrane
antigen - Plasmodium yoelii
Length = 624
Score = 46.4 bits (105), Expect = 0.007
Identities = 78/375 (20%), Positives = 154/375 (41%), Gaps = 26/375 (6%)
Query: 326 NEHEEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDSIMGTP 385
NE+EE L+T DE + ++ + L +++ E + ++ D E+S + T
Sbjct: 110 NEYEESFLETDEYDEEADNENDDDNEHEESFLETDEYE-EEADNENDDDNEHEESFLETD 168
Query: 386 ANRDQEVDMEL-DDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQLDGTFD 444
D+E D E DD E+ F + +++ ++EN+ +SF + + D D
Sbjct: 169 -EYDEEADNENDDDNEHEESFLETDE-YEEADNENDDDN-EHEESFLETDEYEEADNEND 225
Query: 445 NDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEIDEINVSRETADGDVCI 504
+D+ + + NE ++ + +S ++T E DE + + D +
Sbjct: 226 DDNEHEESFLETDEYE------EADNENDDDNEHEESFLETDEYDEEADNEKDDDNENEE 279
Query: 505 SELVRASKISKTSIEN-TEIKSEETFIDAVSRITAKQNIVKLMNKSEIYDLQ-NKFVPTA 562
S L + EN + + EE+F++ N N+ E L+ +++ A
Sbjct: 280 SFLETDEYDEEADNENDDDNEHEESFLETDEYDEEADNENDDDNEHEESFLETDEYDEEA 339
Query: 563 GPSNKPVDCDNTE--MGNSSNNELELSP--DGNELGIVSFYDASKVFDDSFNQTFLQEQT 618
N D ++ E N N+ + ++L F+D+ + D+ + + +
Sbjct: 340 DNENDNNDFESDEDNYANDINSSTTAQSFIEKDDLYFDDFFDSEETIKDAVKKGSKNKNS 399
Query: 619 NCDDCSDIIANEYEKQEDYDKFKDTELKLDVSVNEKLD----TGIKIFT--PTVKPPTKN 672
N +D N +K +K + E K S NE+ + +G+K T +++ P KN
Sbjct: 400 NTSSRNDSTKNMIKK---LNKTSNVEFKNKNSFNEEDNQYEFSGVKSETNKQSLRSPNKN 456
Query: 673 EMETKYKIPKTKQVQ 687
++ K K K Q
Sbjct: 457 GAQSNLKDKKDKNTQ 471
Score = 41.5 bits (93), Expect = 0.19
Identities = 90/427 (21%), Positives = 163/427 (38%), Gaps = 50/427 (11%)
Query: 326 NEHEEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQ---------RV 376
NEHEE L+T DE + ++ + L +++ E D +D D +
Sbjct: 158 NEHEESFLETDEYDEEADNENDDDNEHEESFLETDEYEEADNENDDDNEHEESFLETDEY 217
Query: 377 EEDSIMGTPANRDQEVDMELDDAEYSRIFNDDSVCH-------DQNESENNGSPLSWHDS 429
EE N +E +E D+ E + NDD H D+ + E + +++
Sbjct: 218 EEADNENDDDNEHEESFLETDEYEEADNENDDDNEHEESFLETDEYDEEADNEKDDDNEN 277
Query: 430 FWDGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEID 489
+ D DN++ L+ + NE ++ + +S ++T E D
Sbjct: 278 EESFLETDEYDEEADNEN-DDDNEHEESFLETDEYDEEADNENDDDNEHEESFLETDEYD 336
Query: 490 E----INVSRETADGDVCISELVRASKISKTSIENTEI------KSEETFIDAVSRITAK 539
E N + + + + + +S +++ IE ++ SEET DAV + +
Sbjct: 337 EEADNENDNNDFESDEDNYANDINSSTTAQSFIEKDDLYFDDFFDSEETIKDAVKKGSKN 396
Query: 540 QNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNNELELSPDGNELGIVSFY 599
+N N S D + ++ V+ N N +N+ E S +E S
Sbjct: 397 KN----SNTSSRNDSTKNMIKKLNKTSN-VEFKNKNSFNEEDNQYEFSGVKSETNKQSLR 451
Query: 600 DASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDYDKFKDTELKLDVSVNEKLDTGI 659
+K S N +++ ++ I EYE D EL D+ ++E D
Sbjct: 452 SPNKNGAQS-NLKDKKDKNTQNNMGQINLEEYEITND-------ELPSDI-MSEAYDA-- 500
Query: 660 KIFTPTV-KPPTKNEMETKYKIPKTKQVQPFFSDYKDVGDKVEIGQLVLKLHSNLSRDQK 718
PT+ K N TKYK+ + D K V K + +H+++ + K
Sbjct: 501 --LAPTLHKKEKSNNESTKYKLKNNSSTK----DPKYVPYKKGENSISPHIHADVYKKNK 554
Query: 719 PFEKVLE 725
+++LE
Sbjct: 555 KMDEMLE 561
>UniRef50_O93745 Cluster: DNA polymerase 1; n=1; Aeropyrum pernix|Rep:
DNA polymerase 1 - Aeropyrum pernix
Length = 959
Score = 46.4 bits (105), Expect = 0.007
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 1242 QLGLKLIANVTYG-YTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIY 1300
Q +K+ N +YG + + FS + + VA+SV A GR L ++ RE N ++Y
Sbjct: 681 QSAMKVYINASYGVFGSEKFS--LYSLPVAESVTALGRAVLRGTLEKSRE---LNLHIVY 735
Query: 1301 GDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQ-TKKRYVGF 1359
GDTDS+F+ P + ++ + D V + + L+L+KV++ + KK Y+G
Sbjct: 736 GDTDSLFIWDPPK------DVLNDLVDYV--ERTYGLELELDKVFRAILFSGLKKNYLGI 787
Query: 1360 MFE 1362
E
Sbjct: 788 TEE 790
>UniRef50_P21402 Cluster: DNA polymerase; n=4; Avipoxvirus|Rep: DNA
polymerase - Fowlpox virus (FPV)
Length = 988
Score = 46.0 bits (104), Expect = 0.009
Identities = 60/303 (19%), Positives = 117/303 (38%), Gaps = 41/303 (13%)
Query: 1118 IFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNING-ETAYEFGAWRLRIP 1176
+F P + + + V++ D+ SLYP++ I N + + N N E+ + + P
Sbjct: 519 VFLPSQKTFENNVMIFDYNSLYPNVCIYGNLSPEKLVCILLNSNKLESEINMRTIKSKYP 578
Query: 1177 RSKLEALVKNSLI--HWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAV 1234
+ + S + ++S + V +G++P + K +K +
Sbjct: 579 YPEYVCVSCESRLSDYYSEI---IVYDRREKGIIPKLLEMFIGKRKEYKNLLKTASTTIE 635
Query: 1235 KKAMHSRQLGLKLIANVTYGY------TAANFSGRMPCVEVA-------DSV-------- 1273
S Q K+IAN YG T ++S C + DS+
Sbjct: 636 STLYDSLQYIYKIIANSVYGLMGFSNSTLYSYSSAKTCTTIGRNMITYLDSIMNGAVWEN 695
Query: 1274 -----------VAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIG 1322
+ G + +++ N ++ + +YGDTDS+F + + + +I
Sbjct: 696 DKLILADFPRNIFSGETMFNKELEVPNMNESFKFRSVYGDTDSIFSEISTKDIEKTAKIA 755
Query: 1323 QQIADAV-TADNPPPVALKLEKVYQPCILQTKKRY--VGFMFESPDQEKPTYEAKGIETV 1379
+ + + T ++ E +Y ILQ+KK+Y + ++ +KP KG
Sbjct: 756 KHLEHIINTKILHANFKIEFEAIYTQLILQSKKKYTTIKYLANYKPGDKPIRVNKGTSET 815
Query: 1380 RRD 1382
RRD
Sbjct: 816 RRD 818
>UniRef50_Q1ZD43 Cluster: DNA polymerase; n=2; Psychromonas|Rep: DNA
polymerase - Psychromonas sp. CNPT3
Length = 821
Score = 45.6 bits (103), Expect = 0.012
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 27/232 (11%)
Query: 1221 AVKKSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRET 1280
A+ + +EA K+ Q +K+I N YG + R +A S+ +G +
Sbjct: 501 AILDKLTRAREEAKKEGNQPFQHAIKIIMNSMYG-VLGSAGCRFHDTRLASSITLRGHQI 559
Query: 1281 LERAIKLVRE-NTTWNAKVIYGDTDSMFV-LVPGRSRLEAFEIGQQIADAVT-------A 1331
++ + + + + +VIYGDTDS F+ L + L+A G+ +A + A
Sbjct: 560 MKDTRHFIEQLESEHSLEVIYGDTDSTFISLASCENLLQAQAQGKVLAKKINNYWTARIA 619
Query: 1332 DN---PPPVALKLEKVYQPCILQT--------KKRYVGFMFESPDQEKPTYEAKGIETVR 1380
D P + ++ E + + T KKRYVG D+ KG+E+VR
Sbjct: 620 DEFSLPSYLEIEFESCFSQFFMPTLRGSDVGSKKRYVGL---KTDESGEHLLFKGLESVR 676
Query: 1381 RDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHELFFTR 1432
D +Q +LF + L+ T+ RL + L ++ R
Sbjct: 677 SDWTQMAQIFQKQIYKQLFA---KQSIDALIINTVLRLKKGELDAQLIYHKR 725
>UniRef50_Q0TN00 Cluster: Putative uncharacterized protein; n=1;
Clostridium perfringens ATCC 13124|Rep: Putative
uncharacterized protein - Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A)
Length = 357
Score = 44.8 bits (101), Expect = 0.020
Identities = 43/191 (22%), Positives = 91/191 (47%), Gaps = 10/191 (5%)
Query: 476 PTNTDSNIDTSEIDEINVSRETADGDVCISELVRASKISKTSIENTEIKSEETFIDAVSR 535
P NI EIN +E+ ++ E + K+ +T++E + K + ++
Sbjct: 103 PFYLSDNISVQIRKEINSIKESKTLNIYNKENLEEVKLEQTTLETFKEKKKLNIDSLITL 162
Query: 536 ITAKQNIVKLMNK---SEIYDL-QNKFVPTAGPSNKPVDCDNTEMGNSSNN-ELELSPDG 590
I ++ K +N EIY L + F T S++ +D + ++ NSS + E++ + +
Sbjct: 163 IKNDNSLNKKLNNCTDKEIYSLIKENFNETYEISDELID-EYIDIKNSSESIEIDETINI 221
Query: 591 NELGIVS--FYDASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDYDKFKD--TELK 646
++ +++ D V ++FNQ L+ Q ++ ++A +D DK+K+ K
Sbjct: 222 EKVNLINKELTDQLAVLQENFNQVSLENQNLLNEKESLLAEIDRLNKDIDKYKNKAENQK 281
Query: 647 LDVSVNEKLDT 657
++ ++ KL+T
Sbjct: 282 VENLISMKLNT 292
>UniRef50_A6VXF3 Cluster: DNA polymerase; n=2; Marinomonas|Rep: DNA
polymerase - Marinomonas sp. MWYL1
Length = 782
Score = 44.8 bits (101), Expect = 0.020
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 1245 LKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTD 1304
+K+I N YG +N R E+A S+ +G E L R + E A+VIYGDTD
Sbjct: 493 IKIIMNSFYGVLGSNVC-RFYHAELASSITMRGHELLGRTQVWMEER---GARVIYGDTD 548
Query: 1305 SMFVLVPGRSRLEAFEIGQQIADAVTA 1331
S+FV + + + G+++ D + A
Sbjct: 549 SLFVTLNSEQE-DPQKQGERLRDDINA 574
Score = 42.7 bits (96), Expect = 0.081
Identities = 58/246 (23%), Positives = 104/246 (42%), Gaps = 18/246 (7%)
Query: 906 SNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSRITEKNRQK 965
S+E + I+ V + PDI G+ + ++ +R +ILG+ + + +N
Sbjct: 195 SDEKSLLLAFIRYVKKYSPDIFIGWNLIGFDLQFIDQRCQILGI---RPAFGVNGENWNI 251
Query: 966 RWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFEN-CMYEVLNERVPSYSYAQLSDW 1024
R N+ Y I GRV + L L + Y FE+ + V NE + S+
Sbjct: 252 RSSDNQGKYFASIPGRVALDGITL----LKVGGYHFESYSLNNVSNEILDDGKLLHGSER 307
Query: 1025 WCDESKMLRW---IPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQF 1081
W + ++ + V Y L +R+ +KL +I L G+ + + + GS
Sbjct: 308 WQEIERLHKEDLDAFVAYNLQDCDLVMRIFEKLKLIELQQTRVDLTGIPFEQ--TGGSVA 365
Query: 1082 RVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSLYPS 1141
E+L L +A P + + +P + P Y + V+V DF+SLYPS
Sbjct: 366 AFENLYLPRLHSAGWVA--PAWRDDVFVASPGGFVMSSIPG--LYKN-VLVFDFKSLYPS 420
Query: 1142 MMIAYN 1147
++ ++
Sbjct: 421 IIRTFH 426
>UniRef50_Q2FPC2 Cluster: DNA polymerase; n=3; Methanomicrobiales|Rep:
DNA polymerase - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 818
Score = 44.8 bits (101), Expect = 0.020
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 16/177 (9%)
Query: 1245 LKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTD 1304
+K+I N YG + + R+ E+ +V + GR +E + EN ++ VIYGDTD
Sbjct: 516 IKVIMNTYYGVSGYS-RFRLYDREIGSAVTSVGRAIIEHTRNTI-ENMGYS--VIYGDTD 571
Query: 1305 SMFVLVPGRSRLEAFEIGQQI-----------ADAVTADNPPPVALKLEKVYQPCIL-QT 1352
S + +P S E ++I A V ++K EKVY+
Sbjct: 572 SCMIQIPATSLEETITKAREIEAVLNESYNTFAREVLHAEKHYFSIKFEKVYRRFFQGGK 631
Query: 1353 KKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKR 1409
KKRY G + + + G E R D K++++ + ++ D+ +K+
Sbjct: 632 KKRYAGNLIWKEGKSVDETDMVGFEAKRSDSPLLTRKVMKEVMNKILQGADLPEIKK 688
>UniRef50_UPI00006CCC45 Cluster: hypothetical protein
TTHERM_00334490; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00334490 - Tetrahymena
thermophila SB210
Length = 1247
Score = 44.0 bits (99), Expect = 0.035
Identities = 105/550 (19%), Positives = 206/550 (37%), Gaps = 34/550 (6%)
Query: 312 DLDLTLNRTTKMNLNEHEEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDM 371
D D + T K N+N ++ ++ + V + ++ Q ++ + +E+++
Sbjct: 442 DHDQYQSNTMKKNVNSYKRQENEGNPVFKAIINAHQARRQILSNSIHIQSVEVLNSAEKQ 501
Query: 372 DQQRVEEDSIMGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQ-NESENNGSPLSWHDSF 430
+Q + E+ G N + D + I +++ Q N NN S + ++
Sbjct: 502 NQNKENENIDRGGENNYHNNQKPQNVDQQTKHIEEKENIAVKQVNTFSNNSSVVIEYNEV 561
Query: 431 WDGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEIDE 490
+ IP +Q L++ K V + T + +++
Sbjct: 562 YKQDRIPISHAKMTQSKIICDNHNSS--IQSKLNQALAKEINVMKQSETLKQVPVQNLED 619
Query: 491 INVSRETADGDVCISELVRASKISKTSIENTEIKSEETFIDAVSRITAKQNIVKLMNKSE 550
+ ++ D V ++ +K + I N E K+ + S K+N V N +
Sbjct: 620 V---KKFVDEQVKQIQIQCQAKYKQKQILNDEDKTSK------SAYFIKENSVPQSNNQK 670
Query: 551 IYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNNELELSPDGNELGIVSFYDASKVFDDSFN 610
L F A N+ VD T + S + L+LS G I + Y +++ D
Sbjct: 671 GESLIKAF--NANKINQNVD---TSLNCS--DLLQLSLSGLVTPITNNYQSNQQTDQKDA 723
Query: 611 -QTFLQEQTNCDDCSDIIANEYEKQEDYDK-------FKDTELKLDVSVNEKLDTGIKIF 662
Q F Q + ++ N QE + + F+ +LK V + + ++
Sbjct: 724 IQIFNNYQPSDRSLNEQKENSQRLQEQHKQTQKEEQDFQKIDLKQSEYVPQSSRSNNQLP 783
Query: 663 TPTVKPPTKNEMETKYKIPKTKQVQPFFSDYKDVGDK--VEIGQLVLKLHSNLSRDQKPF 720
TP P TK K I K + F ++ V + ++ + + ++ +
Sbjct: 784 TPPSDPNTKTSFYHKKNICKIAETFTFNTNLSSVQTQGSIDYNNIHNSQNQEFTKQNQIN 843
Query: 721 EKVLETESIENWRQLLFLQKYATQDDYKPDTLRTLLAGNSRYVIQPVVRPPTSEQVKKW- 779
V+ IE R+ Q+ ++ L N +I+ +Q+
Sbjct: 844 NPVISRSPIEQIRKNQ--QQILKVNENNSSYLSQNDINNKNQIIKNFNDQEKVDQIADLE 901
Query: 780 INEQKALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSSIVSIENCESADFL-TSMV 838
I+ QK + L SQ+ S+ + SK + +F N + N+ EIN++ I N + D T
Sbjct: 902 ISHQKLISLHSQYLSQNS-SKLIQNFQNEETKNGNDAEINNTQQQILNNDQIDCKNTKNS 960
Query: 839 IEVHTSVRGD 848
IE + + D
Sbjct: 961 IETDMNFKND 970
>UniRef50_Q9U0K4 Cluster: Putative uncharacterized protein PFD0405w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFD0405w - Plasmodium falciparum
(isolate 3D7)
Length = 622
Score = 44.0 bits (99), Expect = 0.035
Identities = 68/336 (20%), Positives = 128/336 (38%), Gaps = 26/336 (7%)
Query: 255 KQVETDSHYKFENIFAVKLSNKIDKPVLLEHAYYPAETLGDTQLFKAVDVSIHLPSKDLD 314
K+ ET+S K +I +K ++ +K LE + + P + D
Sbjct: 21 KKNETNSVKKLNSISTIKKKSEDNK---LERVTMNESVFNEGDKIMRKKKIVKKPEETND 77
Query: 315 LTLNRTTKMNLNEHEEEDLDTT-IVDENLVLNSSMSLQ-YSQVL-LNSEDMELIDMLHDM 371
N TT +N+NE + + +N + N +S Q Y+ +N + ID +++
Sbjct: 78 KRENMTTSVNINEEGKRSIIVRKFTQKNNMNNEELSEQNYNDCNNINKNENNKIDSINNN 137
Query: 372 DQQRVEEDSIMGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFW 431
D E+ N + ++ N+D++ + NE+ NN ++ +D+
Sbjct: 138 DNINNNENINNNDSINNNDNIN------------NNDNI--NNNENINNNENINNNDNIN 183
Query: 432 DGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNER------VNNPTNTDSNIDT 485
+ NI D +ND+ + + R + KN++ +N+ N + + +
Sbjct: 184 NNDNINNNDNINNNDNINNSNRPVVRKVIKRVIRTRVKNKKDETNKILNDNLNNNQSTND 243
Query: 486 SEIDEINVSRETADGDVCISELVRASKISKTSIENTEIKSEETFIDAVSRITAKQNIVKL 545
D IN +T D D I + K TE ++E +I ++ V
Sbjct: 244 ISCDVINKYGKTQDSDDEILNSIIQKKNELIMDTPTEGNNKELTQKKKKKIIVRKINVSG 303
Query: 546 MNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSN 581
NK + D +N + S +N GN N
Sbjct: 304 KNKKNVPDDKNVYAEKYNYSEIYNSDENLFFGNKGN 339
>UniRef50_Q8I2E0 Cluster: Putative uncharacterized protein PFA0665w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFA0665w - Plasmodium falciparum
(isolate 3D7)
Length = 2900
Score = 44.0 bits (99), Expect = 0.035
Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 13/147 (8%)
Query: 359 SEDMELIDMLHDMDQQRVEEDSIMGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQNESE 418
S+D D D D+ ++D ++ D E D E DD + S ND+ +D NES+
Sbjct: 1987 SDDSNESDESDDNDES--DDDDERDDESDDDDERDDESDDNDDS---NDNDENNDSNESD 2041
Query: 419 NNGSPLSWHDSFWDGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTN 478
+N ++S D + D DND NE +N N
Sbjct: 2042 DNNESDDNNESDDDDERDDERDDNDDNDDSNESDDSNDN------DESNDSNESDDNDDN 2095
Query: 479 TDS--NIDTSEIDEINVSRETADGDVC 503
DS + D++E D N E+ D DVC
Sbjct: 2096 DDSDNSNDSNESDNSNDGNESNDSDVC 2122
>UniRef50_Q54DV1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 846
Score = 44.0 bits (99), Expect = 0.035
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 17/194 (8%)
Query: 470 NERVNNPTNTDSNIDTSEIDEINVSRETADG-DVCISELVRASKISKTSIENTEIKSEE- 527
N NN N ++N + + + I V+RET + + K ++ N +I +E+
Sbjct: 75 NNNNNNNNNNNNNNNNNNYNGILVNRETIENCKIAKDNEEEEEKDEESYCYNKDIANEKS 134
Query: 528 TFIDAVSRITAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNNELELS 587
T + S K +++N N F+ G +N D +N N+ N LE+
Sbjct: 135 TDSENESHFKIKHKETEILNNHN----NNNFINGNGNNNNMNDVNN----NNQKNNLEIE 186
Query: 588 PDGNELGIVSFYDASKVFDDSFNQT-----FLQEQTNCDDCSD--IIANEYEKQEDYDKF 640
+E I + Y+A +++ N L EQ DD + + EY+ ++ K
Sbjct: 187 TIYSEEEIENEYNAEDEENNNINNNDDQKEILVEQEIEDDLEEETLEQAEYQMEKQKQKE 246
Query: 641 KDTELKLDVSVNEK 654
K+ E++LD EK
Sbjct: 247 KEIEMQLDYEEKEK 260
>UniRef50_Q9QSK2 Cluster: DNA polymerase; n=2; Invertebrate iridescent
virus 6|Rep: DNA polymerase - Chilo iridescent virus
(CIV) (Insect iridescent virus type 6)
Length = 1273
Score = 43.6 bits (98), Expect = 0.046
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 25/168 (14%)
Query: 1238 MHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAK 1297
+ RQ K+ AN YG T G +P + +A GR+++ + ++E +
Sbjct: 848 LDKRQNSYKISANSMYGATGVRV-GALPFMPIAMCTTYMGRKSIVEVSQYLKE---LGGR 903
Query: 1298 VIYGDTDSMFV----LVPGRSRLEAFEIGQ----------QIADAVTADNPPPVALKLEK 1343
V+YGDTDS +V +V ++ E + +IA ++ P+ L+ E
Sbjct: 904 VVYGDTDSNYVTFDDVVDKNVKVGTEEFSREMKKLWNHAIEIAKTISKKFDNPITLEFEN 963
Query: 1344 -VYQPCILQTKKRYVGFMFESPD------QEKPTYEAKGIETVRRDGC 1384
+Y ++ TKKRY+ + KP +G+ RRD C
Sbjct: 964 AIYFKFLILTKKRYMYYTCGKDGNILMDANGKPKMGQRGVILSRRDNC 1011
Score = 37.1 bits (82), Expect = 4.0
Identities = 15/25 (60%), Positives = 20/25 (80%)
Query: 1130 VIVLDFQSLYPSMMIAYNYCFSTCI 1154
V+ LDF SLYPS++IA N C+ST +
Sbjct: 627 VVPLDFASLYPSLIIARNMCYSTFV 651
>UniRef50_Q8I240 Cluster: Putative uncharacterized protein PFA0510w;
n=2; Plasmodium|Rep: Putative uncharacterized protein
PFA0510w - Plasmodium falciparum (isolate 3D7)
Length = 2285
Score = 43.6 bits (98), Expect = 0.046
Identities = 57/277 (20%), Positives = 123/277 (44%), Gaps = 21/277 (7%)
Query: 318 NRTTKMNLNEHEEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHD-MDQQRV 376
N +N N + + D ++ N+ +L+ ++N + D+ D M+++ +
Sbjct: 325 NCDDNINNNNCHDNNYDDDLIGHNIFEEKKENLKDLLKIINYNKESMNDLSDDKMEKKHL 384
Query: 377 EEDSIMGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANI 436
+ D+++ +N + ++ DD I +DD++C D N NN + D+ + NI
Sbjct: 385 DIDNVL---SNLCSDNNICSDD----NICSDDNICSDDNICSNNN--IYSDDNIYSDDNI 435
Query: 437 PQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSN--IDTSEIDEINVS 494
D T+ +++ L + K+K+ + T D + I +E +++N+
Sbjct: 436 YSDDNTYCDNNIYCDDDYKKNRLN---EKNKQKHSSCFDKTLDDLSKIIQKNEENDLNII 492
Query: 495 RETADGDVCISELVRASKISKTSIENTEIKSEETFIDAVSRITAKQNIVKLMNKSEIYDL 554
++ ++ ISE +S+ S T++ N +IK E I +++ K+ ++ +I
Sbjct: 493 KQI--DEIIISE-KESSQDSCTNVLN-KIKKERNLTTHKDNIKNVKSVEKIRHRDDIVLC 548
Query: 555 QNKFVPTAGPSNKPVDCDNTEMGNSSNNELELSPDGN 591
K G K +N E+ S+ +LE + + N
Sbjct: 549 DGK-AGKQGVEKKGTK-ENKEVDKISHGKLENNNNNN 583
>UniRef50_Q4UFA2 Cluster: CPSF (Cleavage and polyadenylation
specific factor), subunit A, putative; n=2;
Theileria|Rep: CPSF (Cleavage and polyadenylation
specific factor), subunit A, putative - Theileria
annulata
Length = 1641
Score = 43.6 bits (98), Expect = 0.046
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 540 QNIVKLMNKSEIYDLQNKFVPTAGPS--NKPVDCDNTEMGNSSNNELELSPDGNELGIVS 597
+NIVKL +K +Y ++ G N+ C+N + + +N L++ G E +++
Sbjct: 586 KNIVKLSSKKMLY--LKVYIKADGKFTINRNKMCNNNRLVEAKDNRLKIRNMGTE-EVLN 642
Query: 598 FYDASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDYDKFKDTELKLDVSVNEKLDT 657
+KV F F+ N D NE+E Q + K + K VS K++T
Sbjct: 643 DELTNKVKTVKFVDEFIAVLYNNDQLHKYHVNEFEGQNANKQSKSVKSKKSVSNLSKVET 702
Query: 658 GIKIF 662
G+K+F
Sbjct: 703 GVKMF 707
>UniRef50_Q23CZ4 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 3589
Score = 43.6 bits (98), Expect = 0.046
Identities = 117/612 (19%), Positives = 229/612 (37%), Gaps = 45/612 (7%)
Query: 244 SKSLSQGLTSLKQVETDSHYKFENIFAVKLSNKIDKPVLLEHAYYPAETLGDTQLFKAVD 303
S L L +L Q T + K ++F DK + E +T+ + K
Sbjct: 1534 SSGLQNELNNLNQQNTINQNKDFDLFE-DFQQGGDK--IEEKLQEQQKTVDSQSISKQEQ 1590
Query: 304 VSIHLPSKDLDLTLNRTTKMNLNEHEEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDME 363
V KD + + +N+ ++ + V EN + N + Q QV +D +
Sbjct: 1591 VQSQEQQKDDLFGGDEDRDIKINQIQDNENTQQEVQENEIKNQEIQQQDQQVNDQKDDKD 1650
Query: 364 LIDML------HDMDQQRVEEDSIMGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQNES 417
L+D L ++ QQ ++ N+++E + + HDQ
Sbjct: 1651 LLDNLGQDIVESELKQQPRQQQIDNEIHQNQNEENQQNIQTQDQPLHQQIQHQIHDQKIE 1710
Query: 418 ENNGSPLSWHDSFWDGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPT 477
E + + + S N Q + + + + K+N NN
Sbjct: 1711 EKDTENIQLNPSQVLNVNEKQNVQQQNQNEEDLFGDFSETHQKQDIIILDKQNNESNNVV 1770
Query: 478 NTDSNIDTSEIDEINVSRETADGDVCIS-----ELVRASK----ISKTSIENTEIKSEET 528
N++ + ++I N++ D ++ + ++ +A K I + EN +IK+++
Sbjct: 1771 NSNQITNDNQILHQNMTENNEDNEILTNNQNTNQVTQALKNNENIFENQSENKDIKNQDL 1830
Query: 529 FIDAVSRITAKQNI----VKLMNKSEIYD-LQNKFVPT-------AGPSNKPVDCDNTEM 576
F ++ KQNI V++ E D L+ +P N ++ N ++
Sbjct: 1831 FDSDINEDNDKQNIDQPTVEIKQTLENQDKLEQNLLPNQELAESQQNQVNDQIENRNDDL 1890
Query: 577 GNSSNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCS-----DIIANEY 631
+ LE D + + +F+D F+QT Q QT D D N+
Sbjct: 1891 FGDDSKNLEQQQDQQKQFVGD--KQEDLFED-FSQTENQNQTESKDIQSELGLDNQVNKT 1947
Query: 632 EKQEDYDKFKDTELKLDVSVNEKLDTGIKIFTPTVKPPTKNEMETK-YKIPKTKQVQPFF 690
Q + DK + + +L + +I ++ KNEM+ + +K + ++
Sbjct: 1948 SNQVNEDKAQSEQNQLPKGDDNLFGDFDEI--NQIQQQDKNEMQIQNHKTQENDELTQKN 2005
Query: 691 SDYKDVGDKVEIGQLVLKLHSNLSRDQKPFEK-VLETESIENWRQLLFLQKYATQDDYKP 749
+ +D+ D+++ Q + + +++Q+ K +TE E + Q Q D
Sbjct: 2006 QENQDLFDQIDQSQQNNDENIDFTQNQQQIVKEASQTEKKEEENNIEKQQSVLNQGDQTT 2065
Query: 750 DTLRTLLAGNSRYVIQPVVRPPTSEQVKKWINEQKALQLLSQFSSEQAISKNMDDFNNSQ 809
+ + + S Q +K EQ Q +Q ++ Q I K+ ++ +
Sbjct: 2066 SKEQINFTDKQQEDLFGEFENLNSIQEQK--QEQNQHQESNQSTALQEIKKDQNNGDLFG 2123
Query: 810 ALGLNEDEINSS 821
LG +D NSS
Sbjct: 2124 VLG-QQDNSNSS 2134
>UniRef50_Q8IJ43 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 555
Score = 43.2 bits (97), Expect = 0.061
Identities = 90/462 (19%), Positives = 192/462 (41%), Gaps = 39/462 (8%)
Query: 298 LFKAVDVSIH-LPSKDLDLTLNRTTKMNLNEHEEEDLDTTIVDENLVLNSSMSL--QYSQ 354
+F VD + + P DL+L + + + D +I+ +N+ + + + ++
Sbjct: 1 MFNNVDETYNNSPHCQKDLSLIESIQALTDITSGNDRLYSIIPDNISESDVQIIKDEENE 60
Query: 355 VLLNSEDMELI-DMLHDMDQQRVEEDSIMGTPANRDQEVDMEL---DDAEYSRIFNDDSV 410
+L N +D E++ ++L + Q VEE++++ N + + + D+ R N+D
Sbjct: 61 ILENLDDNEVMKELLINDIQSDVEENNLVENHLNNMENISVNYNLHDNLNMMRNVNNDIN 120
Query: 411 CHDQNESENNGSPLSWHDSFWDGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKN 470
+ N +NN + +++ + A + + +N++ + N
Sbjct: 121 INIHNNVDNNQNVHMNNNN--NNAVVNNNNVDINNNNNADVNNNNNVDIN---------N 169
Query: 471 ERVNNPTNTDSNIDTSEIDEINVSRETA-DGDVCISELVRASKISKTSIENTEIKSEETF 529
NN N ++N+D + + ++++ E + D I+E + K+ + + E+TE +EE
Sbjct: 170 NNNNNNNNNNNNVDINNNNNVDINNEANNENDEVINEEINEEKMEENNDEHTEQINEE-- 227
Query: 530 IDAVSRITAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNNELELSPD 589
T KQN+ + M ++ +++ +N + + M +NE E + +
Sbjct: 228 -------TTKQNVEQSMEETAEENIEGNKEEYIEENND--EYMDESMETYEDNESEYNAE 278
Query: 590 GNELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDYDKFKDTELKLDV 649
NE+ +S V + + E + +D + EYE D D D E ++ V
Sbjct: 279 QNEVYTEQQTSSSNVEPEKEKE---NEHEHENDNNVYSKKEYEYLIDTD---DAE-EIIV 331
Query: 650 SVNEKLDTGIKIFTPTVKPPTKNEMETKYKIPKTKQVQPFFSDYKDVGDKVEIGQLVLKL 709
+K+ + IKI KP + + K + K +Q F K + V + + L
Sbjct: 332 QHGDKILSLIKI-KKVEKPTDQKSEKMKRRGRKKGSMQEFIEQKKKLKGLVVMPHEMYNL 390
Query: 710 HSNLSRD-QKPFEKVLETESIENWRQLLFLQKYATQDDYKPD 750
+ ++ K +E E S ++ + DDY+ D
Sbjct: 391 YKGKGKNLPKQWEYEFEEFSDDDSDDESDFESDDEDDDYEDD 432
>UniRef50_Q55BQ5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 813
Score = 43.2 bits (97), Expect = 0.061
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 268 IFAVKLSNKIDKPVLLEHAYYPAETLGDT-QLFKAVDVSIHLPSKDLDLTLNRTTKMNLN 326
I + K S K++K + H +P+ TLG Q +DV L + ++ L+ T +L
Sbjct: 293 IASPKQSKKVEKSAMKHHPQFPSHTLGVVEQSPMQIDVKPILSKRTANIPLSFDTIKDLK 352
Query: 327 EHEEEDLDTTIVDENLV--LNSSMSLQYSQVL---LNSE-DMELIDMLHDMDQQRVEEDS 380
E + D+N+V L+S M + Q + L E + E+ + +Q EE+
Sbjct: 353 PKELNYQKLSKEDQNIVDELDSQMEKEEEQEIQKQLEKEIETEIKKRRQEESEQEEEEEQ 412
Query: 381 IMGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQNESEN 419
+++E + E ++ + + ND+ Q E EN
Sbjct: 413 EEEQEEEQEEEQEEEQEEEQEEQEDNDEEFGEQQIEKEN 451
>UniRef50_Q3ISP1 Cluster: DNA polymerase; n=1; Natronomonas pharaonis
DSM 2160|Rep: DNA polymerase - Natronomonas pharaonis
(strain DSM 2160 / ATCC 35678)
Length = 1740
Score = 43.2 bits (97), Expect = 0.061
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 15/173 (8%)
Query: 1268 EVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGR-SRLEA----FEIG 1322
E+ +V A GR+ +E + E + VIYGDTDS+ + + S EA FEI
Sbjct: 1432 EMGAAVTATGRDVIEFTEQAAAE---LDKDVIYGDTDSVMLELGNEVSEDEAIEQSFEIE 1488
Query: 1323 QQIADAVTA------DNPPPVALKLEKVYQPCILQ-TKKRYVGFMFESPDQEKPTYEAKG 1375
I DA ++ EK+Y+ KKRY G + +E + G
Sbjct: 1489 SHINDAYDRFAERLNAEEHRFQIEFEKLYRRFFQAGKKKRYAGHIIWKEGKEVDDLDITG 1548
Query: 1376 IETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLPVHEL 1428
E R D P ++ R+ L + T D +K V + R+ E + EL
Sbjct: 1549 FEYQRSDIAPITKEVQREVLEMIVTGEDPEDIKSYVHDVIERVREGDISHEEL 1601
>UniRef50_A2YJD2 Cluster: Putative uncharacterized protein; n=2; Oryza
sativa|Rep: Putative uncharacterized protein - Oryza
sativa subsp. indica (Rice)
Length = 393
Score = 42.7 bits (96), Expect = 0.081
Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 33/107 (30%)
Query: 980 GRVIFNVWRLFRHELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEY 1039
GR+I N+WRL R E+ L++YS E EVL R P +S +Y
Sbjct: 286 GRIILNLWRLMRAEIKLNNYSLEAVADEVL--RKPFFS-------------------DKY 324
Query: 1040 YLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESL 1086
YLT +Q + RTS LA +F + ++ VLSR S +RVES+
Sbjct: 325 YLT--------MQ----VKRTSVLACVFSIDFFSVLSRSSLYRVESI 359
>UniRef50_Q22AM9 Cluster: XPG I-region family protein; n=1;
Tetrahymena thermophila SB210|Rep: XPG I-region family
protein - Tetrahymena thermophila SB210
Length = 822
Score = 42.7 bits (96), Expect = 0.081
Identities = 88/431 (20%), Positives = 171/431 (39%), Gaps = 38/431 (8%)
Query: 229 NQELERRKQLNMSLASKSLSQGLTSLKQVETDSHYKFENIFAVKLSNKIDKPVLLEHAYY 288
NQ+L++R+Q SLS TS KQ + ++ K +V S+ +D+ E ++
Sbjct: 392 NQKLQKRQQ-------TSLSDSATSTKQTQLNAFLKVGTKNSVNKSSSVDQKQGSERNFF 444
Query: 289 PAETLGDTQL-FKAVDVS-IHLPSKDLDLTLNRTTKMNLNEHEEEDLDTTIVDENLVLNS 346
E L F +S ++ S++L LT N N+ + N ++
Sbjct: 445 LLEDANSNSLNFNRSKMSDKNVDSQELSLTNNDIFSKNIFNKNSNVVKPFKPPSN---SN 501
Query: 347 SMSLQYSQVL-LNSEDMELIDMLHDMDQQRVEEDSIMGTPANRDQEVDMELDDAEYSRIF 405
S + Q S +L SE ++ +ED + + QE E D +R
Sbjct: 502 SQNTQSSNILKKKSEYKRPYYEYYEESNYFSDEDDLNFLTVGKIQEQQQE--DTNSNRKE 559
Query: 406 NDDSVCHDQNESENNGSPLSWHDS---FWDGANIPQLDGTFD-NDHXXXXXXXXXXXLQL 461
N S + Q ++ N S L ++ + + N + + N Q
Sbjct: 560 NTSSDNNKQIKNNNQKSELDSDNNQQIYEEENNFENNNDLLNLNQFKSNKLIVNNLQKQT 619
Query: 462 GLSRPKKKNERVNNPTNTDSNIDTSEIDEINVSRETADGDVCISELVRASKISKTSIENT 521
LS +K+ + N ID + I++I++ ++ + E+ + KI++ IE
Sbjct: 620 SLSGLQKQQNSLTNKQYNKLIIDKTPINQIDIPKKNISQNF---EIRQIQKIARNDIE-V 675
Query: 522 EIKSEETFIDAVSRITAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDC--DNTEMGNS 579
E + EE V++I ++ N ++N++ Y +F+ +NK D DN ++
Sbjct: 676 ESEDEEKL---VNQINSEDN--PMLNQNNYYQKSRQFIKKT-INNKENDSQEDNKSCIST 729
Query: 580 SNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIANE--YEKQEDY 637
+ + +S D + ++ K Q + E+ +C +D + ++
Sbjct: 730 QSQKNLISQD-----VGGIQNSEKYQSQKCTQKTISEELSCQGSNDQQGENTILSRMNNF 784
Query: 638 DKFKDTELKLD 648
K D +L +D
Sbjct: 785 TKETDGQLVID 795
>UniRef50_Q0W1G8 Cluster: Putative DNA-directed DNA polymerase B; n=1;
uncultured methanogenic archaeon RC-I|Rep: Putative
DNA-directed DNA polymerase B - Uncultured methanogenic
archaeon RC-I
Length = 770
Score = 42.7 bits (96), Expect = 0.081
Identities = 79/305 (25%), Positives = 127/305 (41%), Gaps = 39/305 (12%)
Query: 1204 RRGVLPXXXXXXXXXXQAVK---KSMKMQNDEAVKKAMHSRQLGLKLIANVTYGYTAANF 1260
R+GV P AVK KS+ ++E K M + L ++L++ Y A N
Sbjct: 439 RKGVYPVVFGKVLAERDAVKAKLKSLDPASEEYRKLEMLYKSLKMQLVSPYGYMQFALN- 497
Query: 1261 SGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFE 1320
V+ S+ A GR L RA + + E+ +N VIY DTDS+F+ R AF
Sbjct: 498 --NFRSVDGNRSIPAYGRHYLLRA-RDIAEDAGFN--VIYADTDSLFIQGGDRELYTAF- 551
Query: 1321 IGQQIADAVTADNPPPVALKLEKV-----YQPCILQTKKRYVGFMFESPDQEKPTYEAKG 1375
+ ++AD + LKLE V + P KK F S D E +G
Sbjct: 552 -----CNRISADF--GLELKLEHVCRWVLFLPEHPGGKKGLKKKYFASVDGE---VLVRG 601
Query: 1376 IETVRRDGCPAGVKLLRQSLCELFTHGD--------MSVVKRLVKATLSRLAETSLPVHE 1427
+E VRR A K +++ + E+ + + V V+ ++R+ ++ E
Sbjct: 602 LE-VRRQDRAAITKKVQEHVLEILASANDATEFRAMIPKVAAYVRGEVARIQAGNVTPEE 660
Query: 1428 LFFTREY-HGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRL 1486
L R+ H Y+ + P + +A R++ R G +V ++VT PL
Sbjct: 661 LAIVRKLSHRPEEYK---ALPHHAVAAEALAAKGRSV-RVGGKVEYIVTGTNKATPLALA 716
Query: 1487 ARTPQ 1491
P+
Sbjct: 717 GNDPE 721
>UniRef50_Q8IBL5 Cluster: Putative uncharacterized protein
PF07_0101; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF07_0101 - Plasmodium
falciparum (isolate 3D7)
Length = 2190
Score = 42.3 bits (95), Expect = 0.11
Identities = 64/286 (22%), Positives = 119/286 (41%), Gaps = 24/286 (8%)
Query: 357 LNSEDMELIDMLHDMDQQRVEEDSIMGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQNE 416
LNS+D D+++ E++ IMG N D V E+ E+ I NDD+ E
Sbjct: 15 LNSQDFSSNTNYKDIEKID-EKNIIMGDYNNTD--VLKEMTSEEFKNILNDDAYYKKLFE 71
Query: 417 SENNGSPLSWHDSFWDGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNP 476
SE + +D DG ++D DN + ++ + K KN NN
Sbjct: 72 SEGKYDSFN-NDK--DGLLNFEIDNLNDNKNNDNIGSNKNNEMK----KIKIKNNENNNN 124
Query: 477 TNTDSNIDTSEIDEINVSRETADGDVCISELVRASKISK-TSIENTEIKSEETFIDAVSR 535
N + N + DE++V ADG++ + +K K N + +++ F+ + +
Sbjct: 125 NNNNKNYYYYD-DELDVD---ADGEINKNNAENINKKEKLPRFSNLSLLNDDFFLKSQNL 180
Query: 536 ITAKQNIVKLMNKSE----IYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNNELELSPDGN 591
KQN L NK + + +L+N + +++ + + SN++L +S
Sbjct: 181 DMNKQN-EDLKNKRDSLLSLKNLRNSSIFNLSLTDENLKRSYQKYELYSNDKLNMSLSQT 239
Query: 592 ELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDY 637
+ YD+ + + +++ D+ +II N+Y Y
Sbjct: 240 D----QIYDSDLLTPSPSKKDSVKKNPRNDEMHNIIENKYNNDNIY 281
>UniRef50_A2FCV0 Cluster: Fimbriae-associated protein, putative;
n=2; Trichomonas vaginalis G3|Rep: Fimbriae-associated
protein, putative - Trichomonas vaginalis G3
Length = 989
Score = 42.3 bits (95), Expect = 0.11
Identities = 79/451 (17%), Positives = 189/451 (41%), Gaps = 26/451 (5%)
Query: 303 DVSIHLP-SKDLDLTLNRTTKMNLNEHEEEDLDTTIVDENLVLNSSMSLQYSQVLLNSED 361
DVS+ S D D+++ ++++E D D ++ ++N+ ++ +S+ V + ED
Sbjct: 346 DVSVDEDVSVDEDVSVE-DEDVSVDEDVSMDEDVSVDEDNVSVDEDVSVDEDDVSVLDED 404
Query: 362 MELIDMLHDMDQQRVEEDSIMGTPANRDQEVDMELD-DAEYSRIFNDDSVCHDQNESENN 420
+ + + + + ++ED M + D++V M+ D + ++D V D++ S +
Sbjct: 405 ISVDEDVSMDEDVSMDEDVSMDEDISMDEDVSMDEDVSVDEDVSVDEDDVSVDEDVSVED 464
Query: 421 GSPLSWHDSFWDGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTD 480
+ + ++ + D + D D + +S + + V+ + D
Sbjct: 465 DISMD------EDVSVDEDDVSVDED-DVSVLDEDDVSVDEDVS-VDEDDVSVDEDVSVD 516
Query: 481 SNIDTSEIDEINVSRETA--DGDVCISELVRASKISKTSIENTEIKSEETFIDAVSRITA 538
++ E D+++V + + + DV + E V + E+ ++ E+ +D ++
Sbjct: 517 EDVSVDE-DDVSVDEDVSVDEDDVSVDEDVSVDEDVSVD-EDVSVEDEDVSVD--EDVSV 572
Query: 539 KQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNNELELSPDGNELGIVSF 598
+++ L ++ L++ V S + VD + S + ++ + D + L VS
Sbjct: 573 LEDVSVL--DEDVSVLEDVSVEDVDVSVEDVDVSVEDEDVSVDEDVSVLEDVSVLEDVSV 630
Query: 599 YDASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDYDKFKDTE-LKLDVSVNEKLDT 657
+ V D+ + E + D+ ++ + + ED +D L DVSV+E +
Sbjct: 631 LEDVSVEDEDVSVE--DEDVSVDEDVSVLEDVSVEDEDVSVLEDVSVLDEDVSVDEDVSV 688
Query: 658 --GIKIFTPTVKPPTKNEMETKYKIPKTKQVQPFFSDYKDVGDKVEIGQLVLKLHSNLSR 715
+ + V ++ + + V D + + V + + V L ++S
Sbjct: 689 LEDVSVEDEDVSVLDEDVSVEDEDVSVLEDVS-VLEDVSVLDEDVSVDEDVSVL-EDVSV 746
Query: 716 DQKPFEKVLETESIENWRQLLFLQKYATQDD 746
D+ + VLE E + + L+ + +D+
Sbjct: 747 DEDDKDSVLEDEDVSVLEDVSVLEDVSVEDE 777
>UniRef50_UPI0000E48F28 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 683
Score = 41.9 bits (94), Expect = 0.14
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 19/218 (8%)
Query: 312 DLDLTLNRTTKMNLNEHEEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDM 371
D D LN T L+ ++ +D D VL S + Q++ N E E ++ D
Sbjct: 61 DDDTVLNDTLPSELSSSNDDIID----DCRSVLQSIVDTTLHQLVQNIESDENLESTSDT 116
Query: 372 DQQRVEEDSIMGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFW 431
+Q + P+ D++ +S +C ++ ES NN P H S
Sbjct: 117 TEQPPIKKIKFAFPS------DLQNSKNSFSNSLVPGLLCQEEMESSNNNMPHLVHTSTA 170
Query: 432 DGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPK--KKNERVNNPTNTDSNIDTSEID 489
D +P + T + L LGLS K + E + + + + TS D
Sbjct: 171 DVKQLP-VSETTNITACSINATVLCDDLSLGLSSEKESENGEGILQDASDSTGVSTSTPD 229
Query: 490 EINVSRETADGDVCISELVRASKISKTSIENTEIKSEE 527
+ AD DV + ++ +++S T ++ ++++ ++
Sbjct: 230 AM------ADEDVDSTTVMEQAEVSSTLLKTSDVREDD 261
>UniRef50_A2FGT6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2263
Score = 41.9 bits (94), Expect = 0.14
Identities = 88/392 (22%), Positives = 153/392 (39%), Gaps = 43/392 (10%)
Query: 467 KKKNERVNNPTNTD----SNIDTSEI---DEINVSRETADGDVCISELVRASKISKTSIE 519
K++NE + T SN D S I E N S ++ + ++ S IS E
Sbjct: 605 KEENETYKSINRTQELVSSNKDNSNIIDNREENESMKSNEKEISSLSNKEKSSISNKLTE 664
Query: 520 NTEIKSEETFIDAVSRITAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVD--CDNTEMG 577
N E KS + I + ++N + NKS L+ + SNK VD E+
Sbjct: 665 NIESKSHDKEIS--KSVNQEENDIS--NKSVEKTLEENEINKEEKSNKSVDKKLQKNEIS 720
Query: 578 NSSNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDY 637
NS N E + P N+L D+ +V + N+ D + + E +
Sbjct: 721 NSVNKEEK--PSNNKLQKKESIDSEEVNESVVNKEEKDISNKSVDSNSVKKEENSTKSVD 778
Query: 638 DKFKDTELKLDV----------SVNEKLDTGIKIFTPTVKPP--TKNEMETKYKIPKTKQ 685
K ++ E+ V S ++KL I + V K E + K +
Sbjct: 779 KKLRENEISNSVNKEENVITNQSSDDKLQQKESIDSKEVNESVINKEEKDISNKSVDSNL 838
Query: 686 VQPFFSDYKDVGDK---VEIGQLVLKLHSNLSRDQKPFEKVLETESI--ENWRQLLFLQK 740
V+ + K V K +I V K +++S + K EKV+E++ I N R + +
Sbjct: 839 VEKEKNSTKSVEKKSQEEDISNSVNKKENDIS-NNKLNEKVVESQEINKSNNRNESIVNE 897
Query: 741 YA--TQDDYKPDTL---RTLLAGNSRYVIQPVVRPPTSEQVKKWINEQKALQLLSQFSSE 795
K +++ + LL+ N + ++ S+ K N+ K++
Sbjct: 898 VEKDVSKSVKEESINKQKDLLSKNEQNSVEENKLNDESKSSIKGSNQSKSVD-----ERN 952
Query: 796 QAISKNMDDFNNSQALGLNEDEINSSIVSIEN 827
I+K +++ N + NE+EI+ S+ N
Sbjct: 953 DEINKELNELNENTKKSTNEEEISKSVEESNN 984
>UniRef50_UPI0000D8E0D3 Cluster: UPI0000D8E0D3 related cluster; n=1;
Danio rerio|Rep: UPI0000D8E0D3 UniRef100 entry - Danio
rerio
Length = 2074
Score = 41.5 bits (93), Expect = 0.19
Identities = 101/530 (19%), Positives = 213/530 (40%), Gaps = 45/530 (8%)
Query: 326 NEHEE-EDLDTTIVDENLVLNSSMS-LQYSQVLLNSEDMELIDMLHDMDQQRVEEDSIMG 383
NE EE + + T + E +N+ L ++ + + E+ HDMDQ R D +
Sbjct: 232 NEKEELKQMKTELEREAETMNNERKQLNKNKEEMQEQKQEMEKERHDMDQSRKSLDKNLK 291
Query: 384 TPANRDQEVDMEL----DDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQL 439
+ Q+ +L ++ E R+ +D + Q E + + +
Sbjct: 292 MMKLQKQKTRSKLLRAKENLEKQRL-REDELRQLQAEIHKQQREIEKEKINIESERAAII 350
Query: 440 DGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPT-NTDSNIDTSEIDEINVSRETA 498
D H L+L +K+ +N + + I + + D+ + +E
Sbjct: 351 KDVEDLQHKIICLDRDAESLKLDREETNRKDMVLNEKNRDIEEKIKSIQSDKDMLEKEKH 410
Query: 499 DGDVCISELVRASKISKTSIENT--EIKSEETFIDAVSRITAKQNIVKLMNKSEIYDLQN 556
D + SEL + + + ENT EI+ E ++ ++ +NI + M++ + + Q
Sbjct: 411 DLEKTRSELYKVKEDLEKQKENTLAEIQKEREDLEKMN-----ENITREMHEIKHQEEQ- 464
Query: 557 KFVPTAGPSNKPVDCDNTEMGNSSNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQE 616
+D TE+ N ELE + + D S++ D ++
Sbjct: 465 -----MNQKQDELDQLKTEIQN-LQQELEKEKE------IIMKDRSQL--DLRQSELDKQ 510
Query: 617 QTNCDDCSDIIANEYEK----QEDYDKFKDTELKLDVSVNEKLD--TGIKIFTPTVKPPT 670
QTN +D + + NE ++ +E+ ++ K K+ + + + D + IK T
Sbjct: 511 QTNMNDIMETMKNERKQLDKDKEEMEEQKQEMEKMKIELEREADEISKIKEETQNKNEIE 570
Query: 671 KNEMETKYKIPKTKQVQPFFSDYKDV--GDKVEIGQLVLKLHSNLSRDQKPFEKVL-ETE 727
K ++ET++ + +++ K V +K ++ Q+ ++L +K E+ E +
Sbjct: 571 KIKLETQHDRQRVEEMAAQIQK-KQVFEEEKNKLEQMKIELEREADEIRKIKEETQNERQ 629
Query: 728 SIENWRQLLFLQKYATQDDYKPDTLR--TLLAGNSRYVIQPVVRP--PTSEQVKKWINEQ 783
S+E + L +K T+ + + D + L + R ++ + T +K +++
Sbjct: 630 SLEKMTEELKKEKMKTELEREADEIEKIKLETQHERQRVEEMTADFMETMNNERKQLDKN 689
Query: 784 KALQLLSQFSSEQAISKNMDDFNNSQALG-LNEDEINSSIVSIENCESAD 832
K + + + ISK ++D N + L EDE+ ++ + D
Sbjct: 690 KVMIEEQKQEMRENISKQIEDIENEKEKSKLREDELKKLQTEVQKQQKRD 739
>UniRef50_A5D6T7 Cluster: Si:dkey-204a24.2 protein; n=5; Danio
rerio|Rep: Si:dkey-204a24.2 protein - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 1165
Score = 41.5 bits (93), Expect = 0.19
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 4/153 (2%)
Query: 578 NSSNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDY 637
+S+N EL + G K D++ + + ++E C D +E EKQ+
Sbjct: 602 SSANQELLKAQQGKRELEEKLLAVVKQTDETDSNSVMKELQQCRDSLKKAQSELEKQKAE 661
Query: 638 DKFKDTELKLDVSVNEKLDTGIKIFTPTVKPPTKNEMETKYK-IPKTKQVQPFFSDY-KD 695
K ELK +EK +T +K + K E E K I KT+ QP SD KD
Sbjct: 662 TLKKQEELKSATRASEKRETELKAEIDRLINQLKKEKEELSKAIEKTQ--QPLVSDQTKD 719
Query: 696 VGDKVEIGQLVLKLHSNLSRDQKPFEKVLETES 728
+E+ + +L ++R + V ++ S
Sbjct: 720 PESNLELQEANARLRERIARMTRLHSSVPDSSS 752
>UniRef50_Q3IIU6 Cluster: DNA polymerase II; n=4; Alteromonadales|Rep:
DNA polymerase II - Pseudoalteromonas haloplanktis
(strain TAC 125)
Length = 806
Score = 41.5 bits (93), Expect = 0.19
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 26/157 (16%)
Query: 1245 LKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTD 1304
+K+I N YG + R ++ S+ +G E ++ K + E +VIYGDTD
Sbjct: 518 IKIIMNSLYGVLGSK-GCRFYDPRLSSSITLRGHEIMQTTRKWIEE---LGYEVIYGDTD 573
Query: 1305 SMFVLVPGR-SRLEAFEIGQQIADAVT---ADN-------PPPVALKLEKVYQPCILQT- 1352
S+FV V R + + EIG + + +D+ + ++ E Y P + T
Sbjct: 574 SIFVKVNERLNATQCNEIGNDVMQVINKRWSDSIKTRFSLTSYLEIEFETHYSPFFMPTI 633
Query: 1353 -------KKRYVGFMFESPDQEKPTYEAKGIETVRRD 1382
KKRYVG + + ++ + KG+ETVR D
Sbjct: 634 RGKKIGSKKRYVG-QIDKNNAKQLIF--KGMETVRSD 667
>UniRef50_Q7P5M3 Cluster: DNA mismatch repair protein mutL; n=3;
Fusobacterium nucleatum|Rep: DNA mismatch repair protein
mutL - Fusobacterium nucleatum subsp. vincentii ATCC
49256
Length = 675
Score = 41.5 bits (93), Expect = 0.19
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 540 QNIVKLMNKSEIYDL-----QNKFVPTAGPSNKPVDCDNTEMGNSSNNELELSPDGNELG 594
+ +VK N++ I+DL +N F + ++ +N N+ NN L+++ ++
Sbjct: 293 KKVVKFANQNAIFDLVKGEIENFFTDDEDFISPYIEAENEVEENTKNNFLDINDFKDDED 352
Query: 595 IVSFY-DASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDYDK--FKDTELKLDVSV 651
+S Y +A +++ FL DD D K+EDY K +KD E++ + +
Sbjct: 353 FISPYIEAENEVEENTKNNFLDINDFKDDVQDFSQLSVVKKEDYSKKDYKDIEIEKEKTF 412
Query: 652 -NEKLDTGIKIFTPTVKPPTKN 672
N T I + +K +KN
Sbjct: 413 GNAGTTTENAINSNEIKEDSKN 434
>UniRef50_Q2BIJ7 Cluster: DNA polymerase; n=1; Neptuniibacter
caesariensis|Rep: DNA polymerase - Neptuniibacter
caesariensis
Length = 785
Score = 41.5 bits (93), Expect = 0.19
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 1231 DEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRE 1290
D+A + + + +K+I N YG +N R ++ S+ +G E L + ++ E
Sbjct: 477 DQAKQSSNSALSQAIKIIMNSFYGVLGSNVC-RFFDQRLSSSITLRGHEILIKTRDIIEE 535
Query: 1291 NTTWNAKVIYGDTDSMFV 1308
+ K+IYGDTDS+FV
Sbjct: 536 E--FGFKIIYGDTDSVFV 551
>UniRef50_Q8I631 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1129
Score = 41.5 bits (93), Expect = 0.19
Identities = 62/320 (19%), Positives = 131/320 (40%), Gaps = 15/320 (4%)
Query: 326 NEHEEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDSIMGTP 385
NE E +D +I D N +N ++ + + N E E+ + + ++ EE++ +
Sbjct: 780 NEEIIESVDESIFDLNDQINDEINDKRNNEENNDESNEVNN--EESNEVNNEENNDVYNE 837
Query: 386 ANRD--QEVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQLDGTF 443
N + +E + E+++ E + + N++ + NE N + ++ + N +
Sbjct: 838 ENNEINKEENNEVNNEEMNEV-NNEVNNEEMNEVNNEENNEENNEENNEENNEEMNEVNN 896
Query: 444 DNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEIDEINVSRET--ADGD 501
+ ++ + K N+ +NN N + N +T++ + + ET + +
Sbjct: 897 EENNEVNNEENNEVNNETNKEENNKGNDEINNEGNNEENNETNKEENNKGNDETNKEENN 956
Query: 502 VCISELVRASKISKTSIENTEIKSEETFIDAVSRITAKQN--IVKLMNKSEIYDLQNKFV 559
E+ N ++ EE + + I ++N I MNK E + N+
Sbjct: 957 KGNDEINNEGNNKGNDDMNNDMNKEENN-EGNNEINKEENNKINDDMNKEENNEGNNEI- 1014
Query: 560 PTAGPSNKPVDCDNTEMGNSSNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTN 619
+NK D N E N NNE+ + NE + +K ++ N E+ N
Sbjct: 1015 -NKKENNKINDDMNKEENNEGNNEIN-KEENNEENNEENNETNKEENNKGNDEINNEENN 1072
Query: 620 CDDCSDIIANEYEKQEDYDK 639
+D + + Y+ +DY++
Sbjct: 1073 EEDNEEY--DYYDSDDDYEE 1090
>UniRef50_Q8I406 Cluster: Phosphatidylinositol 4-kinase, putative;
n=2; Eukaryota|Rep: Phosphatidylinositol 4-kinase,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1559
Score = 41.5 bits (93), Expect = 0.19
Identities = 59/309 (19%), Positives = 123/309 (39%), Gaps = 26/309 (8%)
Query: 356 LLNSEDMELIDMLHDMDQQRVEEDSIMGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQN 415
L N E+ L + D +++ +++ + N + DD + DD D +
Sbjct: 74 LRNRENKNLNENNSDDNKKVNKKNGCVDINMNEHTNKKEDGDDDDGDDDDGDDDDDDDDD 133
Query: 416 ESENNGSPLSWHDSFWDGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNN 475
+ +++G D DG + + N+H ++L + PKKK +NN
Sbjct: 134 DGDDDGDD-DGDDDGDDGDDDSNSNDDIKNNHKYNNDDYHKNMIKLHCTSPKKKEHSINN 192
Query: 476 PTNTDSNIDTSEIDEINVSRETADGDVCISEL----VRASKISKTSIENTEIKSEETFID 531
N + + + + ++ I E+ + +I K + E+ ++ +
Sbjct: 193 NNIVSHNEIEENLKDHTLITNDEEKNIKIIEMYEKKLENEEIKKQNKEDANENNKSQIRE 252
Query: 532 AVSRI-----TAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNNELEL 586
++S+I T+K I+ +N YD N +N + +N NS+NN
Sbjct: 253 SISKIFKECPTSKPKIINEINNETKYDNNNN-------NN---NNNNNNNNNSNNNNKNN 302
Query: 587 SPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCD-DCSDIIANEYEKQEDYDKFKDTEL 645
+ + N+ + Y +++ +N ++E + D D ++I + +K DTE
Sbjct: 303 NKNNNKNSSYNNY----YYNNIYNCNNMKENNHIDGDKNNIYETNNYSDSEKNKSSDTE- 357
Query: 646 KLDVSVNEK 654
K + +N K
Sbjct: 358 KNKLKLNNK 366
>UniRef50_Q55DW9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1043
Score = 41.5 bits (93), Expect = 0.19
Identities = 33/205 (16%), Positives = 75/205 (36%), Gaps = 3/205 (1%)
Query: 440 DGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEIDEINVSRETAD 499
D N+ + + N NN N ++N + + + N + +
Sbjct: 445 DNNNSNNDGTLKQSSSSDSIYFNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 504
Query: 500 GDVCISELVRASKISKTSIENTEIKSEETFIDAVSRITAKQNIVKLMNKSEIYDLQNKFV 559
+ + + + ++ N +I + I+ + + + N + L+N
Sbjct: 505 NNNNNNNNNNNNNNNNSNNNNFDINNSNNIINNKQSTCSSIDGLSYNNNNSGSSLKNSVP 564
Query: 560 PTAGPSNKPVDCDNTEMGNSSNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTN 619
PT SN P + G+SS+N + +GN +G + + ++ DSF + +
Sbjct: 565 PTT--SNTPPR-KRSSGGSSSSNNSNIGSNGNRIGFIKEHKKNQSLPDSFVDFYQSNKNQ 621
Query: 620 CDDCSDIIANEYEKQEDYDKFKDTE 644
+ ++ N+ K Y F + +
Sbjct: 622 SNGYESLLDNDDNKTRGYGSFNEND 646
>UniRef50_Q5A1Z3 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 1918
Score = 41.5 bits (93), Expect = 0.19
Identities = 78/379 (20%), Positives = 152/379 (40%), Gaps = 48/379 (12%)
Query: 331 EDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDSIMGTPANRDQ 390
E L+T DE+ + ++ + L S+ M L +QQ E+S + +
Sbjct: 1151 EKLETATKDESPLQEDELTRLLTPEL-QSQSMNL-----QYEQQSDSEESSVASETESTL 1204
Query: 391 EVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQ--------LDGT 442
E + +AE S + DS H E++ +P S DS N+P+ LDG
Sbjct: 1205 ETTSLVKEAEISE--SADSKNH---LIEDSATPQSESDSKSLEENVPENEQFENINLDGI 1259
Query: 443 FDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEIDEINVSRETADGDV 502
F N ++ + + + E N N + E++ +N T + D+
Sbjct: 1260 FKNS---SSDASAAEEVREDMPKDFDEEEIYNGQPTVPENYEEVELEIVNQENVTDEEDM 1316
Query: 503 --CISELVRASKISKTSIENTEIKSE-----ETFIDAVSRITAKQNIVKLMNKSEIYDLQ 555
+ E+ ++ E++SE E+ + + S + N +++ +I D Q
Sbjct: 1317 EPLVQEVKIDMNFDDDDQDDVEVESESESESESKLSSDSSVEMIHNDIQVPKLEDIEDSQ 1376
Query: 556 -------NKFVPTAGPSNKPVDCDNTEMGNSSNNELE---LSPDGNELGIVSFYDASKVF 605
+ + + +++ D D + GN ++ + L P +E + S D+S+
Sbjct: 1377 VSSSSEDSGEISSTSENDEEQDVDEEDFGNQITSDYKTHSLVPVSSEDEVDSSNDSSE-- 1434
Query: 606 DDSFNQTFLQEQTNCDDCSDIIANEYEKQEDYDKFKD----TELKLDVSVNEKLDTGIKI 661
++ Q ++++++ D+ IIA+EYE+ D K EL+ + IK
Sbjct: 1435 EEDIEQLNVEQESSSDE-EQIIADEYEEPAKNDSVKSDFNINELENHAKEESVDQSDIKD 1493
Query: 662 FT--PTVKPPTKNEMETKY 678
P +KP + E +Y
Sbjct: 1494 VEHYPIIKPEFEGHQEVEY 1512
>UniRef50_Q2SLR0 Cluster: DNA polymerase II; n=1; Hahella chejuensis
KCTC 2396|Rep: DNA polymerase II - Hahella chejuensis
(strain KCTC 2396)
Length = 839
Score = 41.1 bits (92), Expect = 0.25
Identities = 72/300 (24%), Positives = 119/300 (39%), Gaps = 43/300 (14%)
Query: 1231 DEAVKKAMHSRQLGLKLIANVTYGYTAAN----FSGRMPCVEVADSVVAKGRETLERAIK 1286
DEA + + +K++ N YG F R+P S+ +G L R +
Sbjct: 530 DEAKRHKNAAMSQAIKILMNSFYGVLGTPGCRFFDHRLP-----SSITLRGHRILYRTKE 584
Query: 1287 LVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEI---GQQIA--------DAVTADNPP 1335
L+ + +VIYGDTDS+FV + + A EI G+Q+A D + +
Sbjct: 585 LIEQQ---GHQVIYGDTDSVFVWLKEHKQSAAAEIDSVGKQLAATLNQWWRDYLMQEYGI 641
Query: 1336 PVALKLE------KVYQPCI----LQTKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCP 1385
L+++ + P I +KKRY G + + +P KG+ETVR D P
Sbjct: 642 ESFLEIQFETHFLRFVMPTIRGSEKGSKKRYAG--LAARGEGEPEMVFKGLETVRTDWTP 699
Query: 1386 AGVKLLRQSLCELFTHGD--MSVVKRLVKATLSRLAETSLPVHELFFTR--EYHGQAGYR 1441
+ ++ L H + V+ LV + + L + R EY
Sbjct: 700 L-ARTFQKELYRRIFHNEPYEDYVRDLVSDIRAGKKDDLLYYRKRLRRRLDEYQRNVPPH 758
Query: 1442 PGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLVRLARTPQELTRDRSLRP 1501
A+ + I + G+ R R GW + ++VT P R + +L +R + P
Sbjct: 759 VQAARTADRIREEQGLPPR--YQRGGW-IEYVVTVNGPEPLEYRRSALDYDLYVERQIEP 815
>UniRef50_Q6R2C0 Cluster: SOS inducible DNA polymerase; n=2;
Escherichia coli|Rep: SOS inducible DNA polymerase -
Escherichia coli
Length = 325
Score = 41.1 bits (92), Expect = 0.25
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 1231 DEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRE 1290
DEA ++ LK+I N YG + R +A S+ +G + + + L+
Sbjct: 234 DEAKRQGNKPLSQALKIIMNAFYGVLGTT-ACRFFDPRLASSITMRGHQIMRQTKALIEA 292
Query: 1291 NTTWNAKVIYGDTDSMFVLVPG-RSRLEAFEIGQQI 1325
VIYGDTDS FV + G S EA +IG+ +
Sbjct: 293 Q---GYDVIYGDTDSTFVWLKGAHSEEEAAKIGRAL 325
>UniRef50_Q4Z067 Cluster: BIR protein, putative; n=3; Plasmodium
berghei|Rep: BIR protein, putative - Plasmodium berghei
Length = 287
Score = 41.1 bits (92), Expect = 0.25
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 520 NTEIKSEETFIDAVSRITAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNS 579
N +++S++ A+ ++ K N +++YD + + T N+ + D +
Sbjct: 65 NEKLESDKIAEYAILWLSYKLNQKTQNGNTKLYDFYTEHINTNSKYNEHITNDFNINKSV 124
Query: 580 SNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDYDK 639
N+++L + N I FYDA K + + + F + NC +CS EK +D +
Sbjct: 125 IENKIKLM-NMNIKDISKFYDAFKKLCEMYTE-FDDDNKNCTNCSGKAKEFVEKYKDLN- 181
Query: 640 FKDTELKLDVSVNEKLDTGIKIFTPTVKPPTKNEMETKYK-IPKTKQVQ 687
KD S N+ L T + +K KN +K+ +P+ K Q
Sbjct: 182 -KDYNNTNSSSYNKMLST-LSTDYNNLKNKCKNVQNSKFPLLPEIKTTQ 228
>UniRef50_Q24GP7 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Tetrahymena thermophila SB210
Length = 2929
Score = 41.1 bits (92), Expect = 0.25
Identities = 73/361 (20%), Positives = 150/361 (41%), Gaps = 36/361 (9%)
Query: 477 TNTDSNIDTSEIDEINVSRETADGDVCISELVRASKISKTSIENTEIKSEETFIDAVSRI 536
+N S+ DT+++ + + + + CI +V K E+ E I+A +
Sbjct: 225 SNIQSSTDTNQVGNLQIKKNEDNNPDCI--IVEEKSTLKPKQAEVEMCIE---IEANPKD 279
Query: 537 TAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSN-NELELSPDGNELG- 594
+Q + NKS N + T + D++ N+S+ N+L + + N+ G
Sbjct: 280 LIQQKMNNSTNKSYF---SNNSIATPKHLESSLKMDSSIKSNTSSINKLSSNKEENKNGP 336
Query: 595 --IVSFYDASKVFDDSFNQTFLQ-----EQTNCD-----DCSDIIANEYEKQEDYDKFKD 642
I + SK+F ++ Q +Q +++NC + +D+IAN+ E+ K
Sbjct: 337 NTITNNQTTSKIFQENEKQGIIQLENNLQKSNCQIKDQTNVNDLIANQSINSENLQSVKS 396
Query: 643 TELKLDVSVNEKLDTGIKIFTPTVKPPTKN-EMETKYKI-PKTKQVQPFFSDYKDVGDKV 700
E++ ++ K + N ++ +K++ K + + +
Sbjct: 397 LEIQNQGKQEDQFQDKPKQISDNNSTSINNYDLSSKFQQNQKQNDILKIIENIPSSSES- 455
Query: 701 EIGQLVLKLHSNLSRDQKPFEKVLETESIENWR-QLLFLQKYATQDD------YKPDTLR 753
++ Q+ + +S ++DQ+ F++ ET++I + Q LQ+ QDD +K D +
Sbjct: 456 DLSQINSQPNSQQTQDQQLFKQ--ETKAIYDINHQSPILQQKQIQDDIISNKQFKND--Q 511
Query: 754 TLLAGNSRYVIQPVVRPPTSEQVKKWINEQKALQLLSQFSSEQAISKNMDDFNNSQALGL 813
+Y Q + + +NE K ++S+ + ++ S D N SQ L
Sbjct: 512 NNQNNGDKYETQEDQFVFEEKNPQNELNETKQQNIISEDNLQKLNSIQNSDLNLSQNLNK 571
Query: 814 N 814
N
Sbjct: 572 N 572
>UniRef50_Q24BX8 Cluster: SMC family, C-terminal domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: SMC
family, C-terminal domain containing protein -
Tetrahymena thermophila SB210
Length = 1296
Score = 41.1 bits (92), Expect = 0.25
Identities = 54/246 (21%), Positives = 116/246 (47%), Gaps = 21/246 (8%)
Query: 478 NTDSNIDTSEIDEINVSRETADGDVCISELVRASKISKTSIE--NTEIKSEETFIDAVSR 535
N + ID ++ ++ + +D + ++L+ ++ ++SIE NTE+ S + I +
Sbjct: 679 NEEKQIDKKMVELESI--KNSDTEKKYNKLIEQLQVRESSIEITNTELTSIQEKIKKLEE 736
Query: 536 ITAKQNIVKLMNKS-EIYDLQN---KFVPTAGPSNKPVDCDNTEMGNSSNNELELSPDGN 591
KQ I ++ KS EI +L+N + + + +D +E+ + + ++ D
Sbjct: 737 --KKQQIKNVIAKSLEIINLENTVKEIEKRLQDTQEKIDKKRSEVYDPFCKKYKI--DIK 792
Query: 592 ELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDYDKFKDTELKLDVSV 651
EL V+ ++F + ++QT D ++ I + EK ++ K ++ + +
Sbjct: 793 ELISVNADTVERIF-----KNIEKQQTKVQDINNSIKSHQEKLDNIIKAQEKYNENKKNF 847
Query: 652 NEKLDTGIKIFTPTVKPPTKNEMETKYKIPKTKQVQPFFSDYKDVGDKVEIG-QLVLKLH 710
E L+ + T TKNE++ KYK +VQ F + +++ + E QL+++
Sbjct: 848 EELLEQFKNVSTKIQN--TKNELDNKYK-KAISEVQQFEKEIQEINQENESSYQLLIQQP 904
Query: 711 SNLSRD 716
+ L +D
Sbjct: 905 NQLRKD 910
>UniRef50_Q23E20 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1553
Score = 41.1 bits (92), Expect = 0.25
Identities = 56/299 (18%), Positives = 119/299 (39%), Gaps = 10/299 (3%)
Query: 600 DASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDYDK--FKDTELKLDVSVNEKLDT 657
+ + D + LQ+Q N +II + YE+QE +K ++ + ++D + +
Sbjct: 1022 EKDNIVDTWEKKQLLQKQKNRKQIKEIIKSHYEEQERVEKELYQQNQDQMDQLIGQNYFY 1081
Query: 658 GIKIFTPTVKPPTKN-EMETKYKIPKTKQVQPFFSDYKDVGDKVEIGQLVLKLHSNLSRD 716
+ + + P+KN + Y+ K K ++ K I + + + N
Sbjct: 1082 SSRDKKQSKQRPSKNLSQKLTYEQLKLKNMRLIQQAKNITASKKLIEEPPITIIPNKLFQ 1141
Query: 717 QKPFEKVLETESIENWRQLLFLQKYATQDDYKPDTLRTLLAGNSRYVIQP--VVRPPTSE 774
+K+ ET N + + + ++DY + +GN+ QP ++ TS
Sbjct: 1142 SSFSQKIQETIRQINQKS---QNENSKEEDYHKNQNNNQNSGNTNNNSQPMNLMSILTSS 1198
Query: 775 QVKKWINEQKALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSSIVSIENCESADFL 834
++ I + K +QF+ + +I DD + LN+ ++ S+ N + +
Sbjct: 1199 PGRRSILQNKTNNSSNQFNKKLSIITGADDSIHKNNTSLNDQFQRNNYSSVINLPNLTAI 1258
Query: 835 TSMVIEVHTSV--RGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGIIVVDSSSRK 891
I+ S+ R ++ ++ K + N + FL K + I + +S K
Sbjct: 1259 NGSSIDQIMSITDRNILNKTDQIEESKHFIKEINNSSITDSFLIKQMEEFIHYNQNSLK 1317
>UniRef50_A2E434 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Trichomonas vaginalis G3
Length = 3322
Score = 41.1 bits (92), Expect = 0.25
Identities = 72/328 (21%), Positives = 131/328 (39%), Gaps = 29/328 (8%)
Query: 321 TKMNLNEHEEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDS 380
+K +++H + L + DE + + S S YS+V +++E++ ++ + + +
Sbjct: 2952 SKSLVSKHRSKYLSYSSSDEEEIQSQSDSKSYSEV-VDNEEVNSKEIKQVPRELSIVSNK 3010
Query: 381 IMGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQLD 440
+ + N D + E D E S I ++D +D+ E + S S + D + +
Sbjct: 3011 SIKSKLNFDSD---ENDLTENSSIKSEDVSQNDEEEDISTKSISSHISKYLDNDD----E 3063
Query: 441 GTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEIDEINVSRETADG 500
ND L+ S P +E +N +DS SE DEI SR
Sbjct: 3064 NVDSNDKISSKKEEKIGKLE---SIP--VSETLNTREESDSK---SEDDEIVKSR----- 3110
Query: 501 DVCISELVRASKISKTSIENTEIKSEETFIDAVSRITAKQNIVKLMNKSEIYDLQNKFVP 560
+ V + K E EI S++ D + + + I M K I D
Sbjct: 3111 SISSKYFVHSEKEDDNDYEE-EIASKQQ-TDVSNDYSKSKEIDSKMEKHNISDTNPDSNS 3168
Query: 561 TAGPSNKPVDCDNTEMGNSSNNELELSPDGNELGIVSFY---DASKVFDDSFNQTFLQEQ 617
N+P+ TE S +++ E + +E+G +S ++ K + + FL
Sbjct: 3169 INMKQNEPIQTSETEESKSISSK-ESNQSRSEIGTISSLITSESGKSIQEDTDDEFLSVS 3227
Query: 618 TNCDDCSDIIANEYEKQEDYDKFKDTEL 645
+ S + + E+ DKFKD E+
Sbjct: 3228 SQSKHTSKYLVG--DDDEEQDKFKDIEV 3253
>UniRef50_A0YZI8 Cluster: CheA Signal Transduction Histidine
Kinases; n=1; Lyngbya sp. PCC 8106|Rep: CheA Signal
Transduction Histidine Kinases - Lyngbya sp. PCC 8106
Length = 1400
Score = 40.7 bits (91), Expect = 0.33
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 11/161 (6%)
Query: 223 GLEEVWNQELERRKQLNMSLASKSLSQGLTSLKQVETDSHYKFENIFAVKLSNKIDKPVL 282
G EE N+ Q+ + + S+SQ +TS ++ DS F ++F L + D
Sbjct: 568 GDEETENKSFHSTPQIPTTSRTISVSQPMTSSEESSMDSDNLFSDLFE-NLDEETDNA-- 624
Query: 283 LEHAYYPAETLGDTQLFKAVDVSIHLPSKDLDLTLNRTTKMNLNEHEEEDLDTTIVDENL 342
E P ET+ +Q D DL+L L++ T +EH+ I+ E+
Sbjct: 625 -ESQTAPVETVTASQTSGTTDFD------DLELLLHQDTDDGSSEHDSNTEAELIIAEDS 677
Query: 343 VLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDSIMG 383
+ + +L +Q ++S+D E D + D + + + ++G
Sbjct: 678 LFSDLDALLEAQEEMDSDDEE-EDDFEEEDNEFADLERLLG 717
>UniRef50_Q9M9B8 Cluster: F27J15.5; n=4; core eudicotyledons|Rep:
F27J15.5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 392
Score = 40.7 bits (91), Expect = 0.33
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 1049 RMLQKLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRST 1108
R+L+ L I T E+AR+ G+ ++SRG +V S +LR A+ + +
Sbjct: 307 RLLENLMYIYNTIEMARVTGVPTSYLISRGESIKVLSQLLRKAKQKTWF-----FQMLRS 361
Query: 1109 MRAPETLPLIFEPESRFYSDPVIVLDFQSLY 1139
+ L + E + FY +P+ LDF SLY
Sbjct: 362 WNLNKELMKVLEARTGFY-EPIATLDFASLY 391
>UniRef50_Q8I3N9 Cluster: Putative uncharacterized protein PFE1120w;
n=2; Eukaryota|Rep: Putative uncharacterized protein
PFE1120w - Plasmodium falciparum (isolate 3D7)
Length = 9341
Score = 40.7 bits (91), Expect = 0.33
Identities = 69/319 (21%), Positives = 121/319 (37%), Gaps = 30/319 (9%)
Query: 348 MSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDSIMGTPANRDQEVDMELDDAEYSRIFND 407
++L ++ + SED+ M+ +D S G N + + + +LDD + +D
Sbjct: 5184 ITLDMDKIEMESEDLNRSKMVSQIDSNN-NFMSNEGNDPNNNYDNEHDLDDDDDDDDNDD 5242
Query: 408 DSVCH---DQNESENNGSPLSWHDSFWDGANIPQ-------LDGTFDNDHXXXXXXXXXX 457
DS+C+ D N +N +D + N Q D DN+
Sbjct: 5243 DSLCYLLKDPNRDDNTYDNNYDNDLYIHRKNHVQKNFENELFDTIIDNEKSYRRRKKYFK 5302
Query: 458 XLQLGLSRPKKKNER----VNNPTNTDSNIDTSEIDEINVSRETADGDVCISELVRASKI 513
Q+ + KK+ ER N N+ S I IN++ + + S++
Sbjct: 5303 LKQMEERKRKKEQERKRKKKENLKENKRNVCLSIIFSININHKEKKNE---HLFYLESEV 5359
Query: 514 SKTSIENTEIKSEETFIDAVSRITAKQNIVKLMNKSEIYDL--QNKFVP---------TA 562
+ +I + S D + K N+ +N S I+DL N+ + T
Sbjct: 5360 NNFNIMLGKCYSFNEIYDKLKLFKGKTNMKSSINDSIIFDLNYMNRNIDYIKSRSSFYTI 5419
Query: 563 GPSNKPVDCDNTEMGNSSNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCDD 622
+N ++ N NS NN + EL + FYD S +D +N+ E+
Sbjct: 5420 RNNNDNINNINNININSINNNNDKEQLKKELEYL-FYDNSNFYDIYYNEMKQTERLKIML 5478
Query: 623 CSDIIANEYEKQEDYDKFK 641
C+ + E + + DK K
Sbjct: 5479 CNKKLKKERKNEIKKDKKK 5497
>UniRef50_Q54PU3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 721
Score = 40.7 bits (91), Expect = 0.33
Identities = 39/214 (18%), Positives = 85/214 (39%), Gaps = 3/214 (1%)
Query: 370 DMDQQRVEEDSIMGTPANRDQEVDMELDDAEYSRIFNDDSVCHD-QNESENNGSPLSWHD 428
+MD+++ +E+ P + Q+ E + + N + D + + E N ++ +
Sbjct: 237 EMDKEKEKEEKSEEKPQEKPQDKPQEKPEEKLEEKDNKNFENVDKEKKQEENVKNINGKE 296
Query: 429 SFWDGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEI 488
++ P +D + +N++ + N NN N ++N + ++
Sbjct: 297 ELSKESSPPIIDSSDNNNNNEKENKNVDSNNSSNNNNNNNNNNNNNNNNNNNNNNNGNDN 356
Query: 489 DEINVSRETADGDVCISELVRASKISKTSIENTEIKSEETFIDAVSRITAKQNIVKLMNK 548
D+ N E D ++ S +KT N + ++ + + + + +
Sbjct: 357 DK-NKKLENIINDDKEEMVIDESVSTKTDTNNNNNNNNNNNNTNGTQEKGRDSPINIESN 415
Query: 549 SEIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNN 582
S I DL+NK PS P + + T N++NN
Sbjct: 416 SNI-DLKNKEKTAPSPSTPPNNSNTTTNNNNNNN 448
>UniRef50_A2EQJ1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 959
Score = 40.7 bits (91), Expect = 0.33
Identities = 66/315 (20%), Positives = 129/315 (40%), Gaps = 28/315 (8%)
Query: 522 EIKSEETFIDAVSRI--TAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDCD---NTEM 576
E K+++T +D + RI T+ +NIV + + EI L+ + + VD + T
Sbjct: 449 ERKTQKTMLDTLMRIFKTSMENIV-VSERDEIRQLELNYEKNKNETQTTVDNEYNAKTRF 507
Query: 577 GNSSNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQED 636
+ S N+L+ + I + + QT + D+ D EY+K D
Sbjct: 508 TSQSINDLQNQYNEEMERIKNERERDIDLQTEMIQTEFNNMKSVDEIRDEYVKEYQKLTD 567
Query: 637 YDKFKDTELKLDVSVNEKLDTGIKIFTPTVKPPTKNEMETKYKIPKTKQVQPFFSDYKDV 696
+ + + + +EK IK +K +N+ ET + + +D+ +
Sbjct: 568 EFESINEKPTISDKYSEKNLNEIKAKKDEIKIKLQNDKET--------MLDKYKTDFANE 619
Query: 697 GDKVEIGQLVLKLHSNLSRDQKP-FEKVLETESIENWRQLLFLQKYATQDDYKPDTLRTL 755
+ E L N + D P +++ E E+++ + KY TQ + L+ L
Sbjct: 620 QSRHEAKLLTYISALNETIDVGPELQRIREKENVK-------ITKYNTQIQEYSEKLKEL 672
Query: 756 LAGNSRYVIQPVVRPPTSEQVKKWINE----QKALQLLSQFSSEQAISKNMDDFNNSQAL 811
+ V P ++++ ++E QK ++ SE+ I + +D+ +
Sbjct: 673 QLEFKPATGEAAVDCPEIQELRNKLSEALKNQKEQLTKARNESEKDIKELIDEIKKQE-- 730
Query: 812 GLNEDEINSSIVSIE 826
GLN+D I + S+E
Sbjct: 731 GLNDDSIKNLQESLE 745
>UniRef50_Q93M88 Cluster: Putative uncharacterized protein PCP59;
n=1; Clostridium perfringens|Rep: Putative
uncharacterized protein PCP59 - Clostridium perfringens
Length = 357
Score = 40.3 bits (90), Expect = 0.43
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 471 ERVNNPTNTDSNIDTSEIDEINVSRETADGDVCISELVRASKISKTSIENTEIKSEETFI 530
E N+ +S + S ++ +T DG+V + + + I+ +S + K +
Sbjct: 78 EATNDEATNESEANKSTPEDGIEVEQTKDGNVIVKDQKTGNIIADSSKGDDVKKVINSKK 137
Query: 531 DAVSRITAKQNIVKLMNKSE-IYDLQ---NKFVPTAGPSNKPVDCDNTEMGNSSNNELEL 586
DA S IT K + + K E I D+ + P NKP + +N + +SS N+ E
Sbjct: 138 DAGSSITIKNDKTGKVEKVEDIKDVTATGEGTITIVKPENKPENTENNKPDSSSENKPES 197
Query: 587 SPDGNE 592
P+ NE
Sbjct: 198 KPENNE 203
>UniRef50_Q31FJ6 Cluster: Aminopeptidase N; n=1; Thiomicrospira
crunogena XCL-2|Rep: Aminopeptidase N - Thiomicrospira
crunogena (strain XCL-2)
Length = 884
Score = 40.3 bits (90), Expect = 0.43
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 217 DGIENPGLEEVWNQELERRKQLNMSLASKSLSQGLTSLKQVETDSHYKFENIFAVKLSNK 276
D E GLE L R +SL K+ + L L +TDS ++E+I + + N
Sbjct: 525 DTFEFMGLETAPYLSLLRHFSAPVSLNYKASEEELMILASHDTDSFVRWESIQKLAMLNL 584
Query: 277 IDKPVLLEHAYYPAETLGDTQ-LFKAV--DVSIHLPSKDLDLTLNRTTKMNLNEHEEEDL 333
+ +++ P L Q FKAV D I L K L + L T + ++EE D+
Sbjct: 585 KENVTRFKNS-EPCLVLDSYQNAFKAVLEDEQIDLALKSLAMALPDITYFS-EQYEEVDM 642
Query: 334 DTTIVDENLVLNSSMSLQYSQVLLNS 359
D + N L +M+ + ++LL +
Sbjct: 643 DAVLASHNF-LKKAMAELFEELLLET 667
>UniRef50_Q2SR11 Cluster: Membrane protein, putative; n=3;
Mycoplasma|Rep: Membrane protein, putative - Mycoplasma
capricolum subsp. capricolum (strain California kid /
ATCC27343 / NCTC 10154)
Length = 752
Score = 40.3 bits (90), Expect = 0.43
Identities = 60/283 (21%), Positives = 130/283 (45%), Gaps = 26/283 (9%)
Query: 464 SRPKKKNERVNNPTNTDSNIDTSEIDEINVSRETADGDVCISELVRASKISKTSIENTEI 523
S+ K+ N +++N T ++ S+I +N +++ + + E +++ + T+I++
Sbjct: 274 SQIKQNNTKIDNLTKEFKQLE-SQIQNLN-NQKKQGWNKELKEQLKSKQEKLTTIKSKIS 331
Query: 524 KSEETFIDAVSRITAKQNIVKLM---NKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGN-- 578
++E+ + +I+ + VK + N S+ +L K K D E+ N
Sbjct: 332 ENEKAISEFTEQISILEKEVKDLENDNSSKQKELNEKHQQLE-LVKKENDSKKQEIKNLE 390
Query: 579 SSNNELELSPDGNELGIVSF-------YDASKVFDDSFNQTFLQEQTNCDDCSDIIANEY 631
S N LEL E+ F ++ V + + + N D D+
Sbjct: 391 SQINSLELKIKKQEVDTQIFDTEIEEAQESKLVIEKEIEKLKSEIAKNKDTIKDL----- 445
Query: 632 EKQEDYDKFKDTELKLDVSVNEKLDTGIKIFTPTVKPPTKNEMETKYKI-PKTKQVQPFF 690
K++DY F+ KLD S+ + L T +K+F ++K +N +TK ++ K ++++ F
Sbjct: 446 -KEQDY-VFELKYEKLD-SLRDDLKTQLKVFEISIKKTKQNLEKTKQELKSKEQEIKKFN 502
Query: 691 SDYKDVG-DKVEIGQLVLKLHSNLSR-DQKPFEKVLETESIEN 731
+ K + + E+ + + L +N+ + + + EK E + +E+
Sbjct: 503 DEVKKIDQENKELNKQISLLKNNVEKLESEKLEKEQEFKQLES 545
>UniRef50_Q2S127 Cluster: DNA polymerase; n=1; Salinibacter ruber DSM
13855|Rep: DNA polymerase - Salinibacter ruber (strain
DSM 13855)
Length = 1162
Score = 40.3 bits (90), Expect = 0.43
Identities = 57/249 (22%), Positives = 102/249 (40%), Gaps = 22/249 (8%)
Query: 908 EIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLD--VLKDLSRITEKNRQK 965
E + + E++ ++ DPD++ G+ I Y+L+R + G+D + +D S +
Sbjct: 210 EEQLLQELVYVLQERDPDVIEGHNIFEFDLAYLLDRCALHGVDFAIGRDGSVPRTYDSSM 269
Query: 966 RWMKNESDYEG-RIIGRVI----FNVWRLFRHELALSSYSFENC--MYEVLNERVPSYSY 1018
R+ + DY I+GR + F V L YS + +++ E
Sbjct: 270 RFAERTVDYPAVDIVGRHVIDTYFQVMSFDVFSRDLPDYSLKTAARYFDLAPEERTYIEG 329
Query: 1019 AQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQWWEVLSRG 1078
+++ W + L +EY L + T R+ L T LA++ + + RG
Sbjct: 330 TEIAKAWRTDRATL----LEYALDDVIETKRLAGHLS--GSTFYLAQMLPMTYGSSARRG 383
Query: 1079 SQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPVIVLDFQSL 1138
++ESL +R L P + S T I P++ D +SL
Sbjct: 384 PAGKIESLFVR--EYLRRRHALPRSEWGSQSMGGYTDIFI-----TGVLGPIVYADVESL 436
Query: 1139 YPSMMIAYN 1147
YPS+M+ Y+
Sbjct: 437 YPSIMLNYD 445
>UniRef50_Q8IJM3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 971
Score = 40.3 bits (90), Expect = 0.43
Identities = 48/234 (20%), Positives = 93/234 (39%), Gaps = 12/234 (5%)
Query: 358 NSEDMELIDMLHDMDQQRVEEDSIMGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQNES 417
N+++++ D++ + D+ + + + ++ + D I N+D + N+
Sbjct: 682 NNDEVKNNDVVKNNDEVKNNDVVKNNDEVKNNDDIKNKDDIKNNDDIKNNDDI--KNNDE 739
Query: 418 ENNGSPLSWHDSFWDGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPK----KKNERV 473
N + +D + NI D +ND K KKNE
Sbjct: 740 VKNNDEVKNNDDVKNNDNIKNNDDIKNNDDIKNIGEVKSTEGAKKNKESKLHSVKKNEDG 799
Query: 474 NNPTNTDSNIDTSEIDEINVSR---ETADGDVCISE-LVRASKISKTSIE-NTEIKSEET 528
N + N D ++ +EIN ++ + V ++ ++ KI S+E N I + E
Sbjct: 800 NKSKEINQNSDMNKSNEINKNKSYEKIKSKSVDFNKNVLNTEKIKSKSVEYNKNIINTEK 859
Query: 529 FIDAVSRITAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNN 582
+ +N K +NKS+ D +NK+ N + D+T N++NN
Sbjct: 860 AKSKSKSVEINKNS-KAINKSKNNDNKNKYKTKNKSKNVNISTDHTNNNNNNNN 912
>UniRef50_Q8IIS9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 3334
Score = 40.3 bits (90), Expect = 0.43
Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 17/207 (8%)
Query: 467 KKKNERVNNPTNTDSNIDTSEIDEINVSRETADGDVCISELVR-------ASKISKTSIE 519
K +NE NN TN + N + + N + E + + +E + A I + E
Sbjct: 2112 KDENEIKNNDTNNNENNNNENNNNENNNNENNNETIVSNEDQKIKEEKTVAVNIDEVLFE 2171
Query: 520 NTEIKSEETFIDAVSRITAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNS 579
E K +E V R+ +I K+ + ++ ++ + + + D + E +
Sbjct: 2172 EKENKKDENECSQVDRVNINNDITKVDEEKKMDEIITCEKNISNENKQSGDNNKLEKEKN 2231
Query: 580 SNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIANE-YEKQEDYD 638
NE+ D NE+ Y+ + + + ++ C+ NE YEK E +
Sbjct: 2232 DKNEIYEKNDKNEI-----YEKNDKNEKNDKNEKNEKNEICEKNEICEKNEIYEKNEICE 2286
Query: 639 KFKDTELKLDVS----VNEKLDTGIKI 661
K + + KL+ S +NEK+ +K+
Sbjct: 2287 KNEKNDNKLEKSSDEHMNEKISDNVKV 2313
>UniRef50_Q6LFD0 Cluster: Putative myosin-like protein; n=2; cellular
organisms|Rep: Putative myosin-like protein - Plasmodium
falciparum (isolate 3D7)
Length = 2153
Score = 40.3 bits (90), Expect = 0.43
Identities = 43/214 (20%), Positives = 94/214 (43%), Gaps = 14/214 (6%)
Query: 370 DMDQQRVEEDSIMGTPANRDQEVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDS 429
D+ + EED+I N+ +E ++++++ + D+ V D E++N D+
Sbjct: 1260 DVKDNKGEEDNI-DVEDNKGEEDNIDVEENKNVEDNKDEEVNIDVEENKNVEDNKDVEDN 1318
Query: 430 FWDGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEID 489
+ NI + D+ ++ + K+E VN + N++ ++ +
Sbjct: 1319 IDEEVNIDVEENKNVEDNKDEEVNID---VEENKNVEDNKDEEVNIDVEENKNVEDNKDE 1375
Query: 490 EINV----SRETADG-DVCISELVRASKISKTSIENTEIKSEETFIDAVSRITAKQNIVK 544
E+N+ ++ D DV + V + I+ ++TE++++E ID + K N+++
Sbjct: 1376 EVNIDVEENKNVEDNLDVEDNLDVEDNLINVKESKDTEVQNDEQKIDKNNEEDIKDNVIE 1435
Query: 545 LMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGN 578
MNK QN + + +D D ++ N
Sbjct: 1436 DMNKE-----QNNYNKMFKVEDNIIDLDYVDLSN 1464
>UniRef50_Q5CS49 Cluster: G patch domain containing protein; n=2;
Cryptosporidium|Rep: G patch domain containing protein -
Cryptosporidium parvum Iowa II
Length = 189
Score = 40.3 bits (90), Expect = 0.43
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 474 NNPTNT-DSNIDTSEIDEIN---VSRETADGDVCISELVRASKISKTSIENTEIKSEETF 529
NN N +NI+ S +++N +S ++ D IS ++SK S + + + KS++ F
Sbjct: 92 NNVANKLSTNINDSRYEDLNSDDLSTDSEDESQSISS--KSSKSSNSKKDKKKTKSKQKF 149
Query: 530 IDAVSRITAKQNIVKLMNKSEIYDLQNK 557
V IT K +I+K+ K+E D ++K
Sbjct: 150 ESNVENITCKDDIIKVKKKTEKSDKKSK 177
>UniRef50_A2EN31 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion
protein, putative - Trichomonas vaginalis G3
Length = 5296
Score = 40.3 bits (90), Expect = 0.43
Identities = 105/567 (18%), Positives = 235/567 (41%), Gaps = 47/567 (8%)
Query: 224 LEEVWNQELERRKQLN-MSLASKSL-SQGLTSLKQVETDSHYKFENIFAVKLSNKIDKPV 281
LEEV N++ E ++LN A+K+L ++ + K++E K E ++ + + K +
Sbjct: 3569 LEEVQNEKAETERKLNEAEEANKNLENEKNETQKKLEEAEQQKAETQKLLEQTEEAKKNL 3628
Query: 282 LLEHAYYPAETLGDTQLFKAVDVSIHLPSKDLDLTLNR--TTKMNLNEHEEE----DLDT 335
E + + + K + + L+ N T+ LNE EE + +
Sbjct: 3629 ANEKSEAERKLQETEEAKKNLANEKSEAERKLEEVQNEKAETERKLNEAEEANKNLENEK 3688
Query: 336 TIVDENLVLNSSMSLQYSQVLLNSEDME--LIDMLHDMDQQRVEEDSIMGTPANRDQEVD 393
+ L + ++L +E+ + L + + +++ E + AN E +
Sbjct: 3689 NETQKKLEEAEQQKAETQKLLEQTEEAKKNLANEKSEAERKLQETEEAKKNLANEKSEAE 3748
Query: 394 MELDD-----AEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQLDGTFDNDHX 448
+L++ AE R N+ + E+E N + ++ A +L +
Sbjct: 3749 RKLEEVQNEKAETERKLNEAEEANKNLENEKNETQKKLEEAEQQKAETQKLLEQTEEAKK 3808
Query: 449 XXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEIDEINVSRETADGDVCISELV 508
+L + KKN ++ +D ++ ++N+ E A+ +L+
Sbjct: 3809 NLENEKSETEKKLQETEEAKKNLE-QEKSDIQKKLDETKQQKVNLENEKAE----TQKLL 3863
Query: 509 RASKISKTSIENTEIKSEETFIDAVSRITAKQNIVKLMNKSE--IYDLQNKFVPTAGPSN 566
++ +K ++EN + ++E+ + AK+N+ +++E + ++QN+ T N
Sbjct: 3864 EETEEAKKNLENEKAETEKRLQETEE---AKKNLANEKSEAERKLEEVQNEKAETERKLN 3920
Query: 567 KPVDCDNTEMGNSSN------NELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNC 620
+ + N + N N E E + + +A K ++ ++T + Q
Sbjct: 3921 EAEEA-NKNLENEKNETQKKLEEAEQQKAETQKLLEQTEEAKKNLENEKSETEKKLQETE 3979
Query: 621 DDCSDIIANEYEKQEDYDKFKDTELKLDVSVNEKLDT-GIKIFTPTVKPPTKNE-METKY 678
+ ++ + + Q+ D+ K ++ L+ NEK +T + T K +NE ET+
Sbjct: 3980 EAKKNLEQEKSDIQKKLDETKQQKVNLE---NEKAETQKLLEETEEAKKNLENEKAETQK 4036
Query: 679 KIPKTKQVQPFFSDYKDVGDK----VEIGQLVLKLHSN-----LSRDQKPFEKVLETESI 729
K+ + ++ + K +K V+ + L+ N L +K ++++E +S
Sbjct: 4037 KLDEAEEAKKNLEQEKSDAEKKLEEVQNEKSALENEKNETQKKLEEAEKAKDQIVEEKSA 4096
Query: 730 ENWRQLLFLQKYATQDDYKPDTLRTLL 756
RQL+ QK ++++ + D ++ L
Sbjct: 4097 VE-RQLVESQKDSSENQKQQDEEKSKL 4122
>UniRef50_A0E422 Cluster: Chromosome undetermined scaffold_77, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_77,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 682
Score = 40.3 bits (90), Expect = 0.43
Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 6/160 (3%)
Query: 667 KPPTKNEMETKYKIPKTKQVQPFFSDYKDVGDKVEIGQLVLKLHSNLSRDQKPFEKVLET 726
K N+ E + + K KQ QP F K++ K + L LH ++ + ++ +T
Sbjct: 405 KVAVNNQNEKQNESDKKKQNQPNFEFEKEMEVKQKQQDLEQNLHHQFVQEARNSDQYTQT 464
Query: 727 ES--IENWRQLLFLQKYATQDDYKPDTLRTLLAGNSRYVIQPVVRPPTSEQVKKWINEQK 784
E + ++Q L K Q++ + L + G S I + +P +Q K I ++
Sbjct: 465 EEYFVPQYKQFLTPPKVIMQNELIQNQLENNIKGQSEVQIFDIEQPDVKKQTKTSI--RQ 522
Query: 785 ALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSSIVS 824
+ + + +K FN S L N E+ IVS
Sbjct: 523 SYKQFESCKPKTPCNKTYSAFNTS--LESNIIELKPKIVS 560
>UniRef50_Q4T3R0 Cluster: Chromosome undetermined SCAF9938, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF9938, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 344
Score = 39.9 bits (89), Expect = 0.57
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 18/143 (12%)
Query: 658 GIKIFTPTVKPPTKNEMETKY---KIPKTKQVQPFFSDYKDVGDK-VEIGQLVLKLHSNL 713
G I P + PP ++E+ + ++ + +P+ SD D +K +E+G L + + L
Sbjct: 201 GTHILKPLMSPPNRDEIVSTLLDLEMSEATFQEPYCSDPSDAPEKPMEVGGHKLMIATRL 260
Query: 714 SRDQKPFEKVLETESIENWRQLLFLQKYATQDDYKPDTLRTLLAGNS------------R 761
++ F L E + WR + + + + LLAGNS +
Sbjct: 261 VKELAEFNGELSLEGLHFWRTVFSAMTHPAATI--TSSSQVLLAGNSEGTKKQTSTADKK 318
Query: 762 YVIQPVVRPPTSEQVKKWINEQK 784
++ P PP E V+ W+ +K
Sbjct: 319 VILLPCRNPPRREHVQLWLEARK 341
>UniRef50_A5MZN2 Cluster: Putative uncharacterized protein; n=1;
Clostridium kluyveri DSM 555|Rep: Putative
uncharacterized protein - Clostridium kluyveri DSM 555
Length = 547
Score = 39.9 bits (89), Expect = 0.57
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Query: 543 VKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNNELELSPDGNELGIVSFYDAS 602
+ + N IYD++ F+ AG P T+ N NN E+S +L + Y S
Sbjct: 20 ISIRNTDGIYDIKVSFISEAGQET-PFR-KVTDAKNGDNNVFEISKQNKDLYRLKIYSPS 77
Query: 603 KVFDDSFNQTFLQEQ--TNCDDCSDIIANEYEKQEDYDKFKDTELKLDVSVNEKL-DTGI 659
K + +F + + T D +++ YE DY++ K LK+ +++ + + I
Sbjct: 78 KNEEKTFKIVYTMKNVATKYKDTAELF---YEYWSDYNETKIDNLKIHINLPYNMKNQDI 134
Query: 660 KIFTPTV 666
K + TV
Sbjct: 135 KAYYHTV 141
>UniRef50_A0L7M2 Cluster: NAD-glutamate dehydrogenase; n=1;
Magnetococcus sp. MC-1|Rep: NAD-glutamate dehydrogenase
- Magnetococcus sp. (strain MC-1)
Length = 1623
Score = 39.9 bits (89), Expect = 0.57
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 60 PQLLYQIAASLDKALNIAMKQATSSNQHVYKI----SLVKGLPF---YGYHDKEHLYLKV 112
P+L +Q+ NI K+AT ++Q V I LV+G F ++ K +Y+K+
Sbjct: 515 PRLAFQLCTRYSSTFNILYKEATPADQAVLDIEMLEKLVEGSSFTSRIAHYPKGQVYIKL 574
Query: 113 FLYRPGLIKQAVELFSSGAI 132
+ ++P ++ + V+ F + I
Sbjct: 575 YAHKPAMLTKIVQTFDNFGI 594
>UniRef50_Q4YBL9 Cluster: Putative uncharacterized protein; n=5;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 1958
Score = 39.9 bits (89), Expect = 0.57
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 9/197 (4%)
Query: 468 KKNERVNNPTNTDSNIDTSEIDE--INVSRETADGDVCISELVRASKISKTSIE-NTEIK 524
K+N + N ++ S T E ++ + + I + + K++K E N EI
Sbjct: 1343 KENNSIKNAHHSRSIRGTKTHQENITHIEEMSKKNEELIKKNEQIWKLNKYIEELNKEIT 1402
Query: 525 SEETFIDAVSRITAKQNIVKLMNKSEIYDLQN--KFVPTAGPSNKPVDCDNTEMGNSSNN 582
+++ I + +A +N V NK I L++ K + N D DN + + +
Sbjct: 1403 NKDYIIMKSQQESADKNDVLEKNKQYIIFLKDQIKLLCNNIDENNLFDIDNVNLSPTLRS 1462
Query: 583 ELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQ---TNCDDCSDIIANEYEKQEDYDK 639
++ N V YD K N+ F Q D +E+ QE Y+
Sbjct: 1463 FIKRKSYNNRCSFVEVYDEKKSNHGHENENFASRQKRRETFDQSRKKKLSEFTSQEQYNF 1522
Query: 640 FKDTELKLDVSVNEKLD 656
+ + E+K++ +N K+D
Sbjct: 1523 YDENEVKIE-EMNLKMD 1538
>UniRef50_Q22SE4 Cluster: Tesmin/TSO1-like CXC domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Tesmin/TSO1-like CXC domain containing protein -
Tetrahymena thermophila SB210
Length = 471
Score = 39.9 bits (89), Expect = 0.57
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 573 NTEMGNSSNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIANEYE 632
N N+SNNE E + N+ + ++ +S ++E+ DD D NE E
Sbjct: 294 NNSSSNNSNNEEEEEEEENQ----ELDEELEIKQNSRMNKNMKERE--DDIDD--ENEQE 345
Query: 633 KQEDYDKFKDTELKLDVSVNEKLDTGIKIFTPTVKPPTKNEME--TKYKIPKTKQVQPFF 690
++E+ ++ ++ +NE++ K++T +K P K + T K Q Q
Sbjct: 346 EEEEEEQEEEINQDRQRQINEQISPSQKMYTTPLKQPIKQDSRSLTTADTAKKNQCQEND 405
Query: 691 SDYKD--VGDKVEIGQLVLKLHSNLSRDQKPFEKVLETE 727
S+ K+ V K+ Q K N S +Q E ++ E
Sbjct: 406 SEIKNRIVKLKISESQSTKKQQPNKSENQNNHEHQIDQE 444
>UniRef50_Q5AL15 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 400
Score = 39.9 bits (89), Expect = 0.57
Identities = 43/224 (19%), Positives = 91/224 (40%), Gaps = 14/224 (6%)
Query: 322 KMNLNEHEEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQ-RVEEDS 380
KMN N+ + D + ++L N+ + + +V+ E++E + + ++ ++ + +
Sbjct: 177 KMN-NDRQRVDGVDVVGSKDLKSNNEDEIDFGEVIPYEEEVEKVSINDEVKNNCKINKSN 235
Query: 381 IMGTPANRD-QEVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQL 439
+ + Q D DD + +I NDD H + N S + + +NI
Sbjct: 236 TLQFQGKENLQRFDKIDDDTDIQQIKNDDDKFHSKKSKRNLSSLSEEEEEEEEDSNI--- 292
Query: 440 DGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEIDEINVSRETAD 499
F + + +E N T+T ++ DT + IN +T D
Sbjct: 293 --IFKKSKSKSKSTTIHNQSNIHSEQISINDENNNKSTSTSTSTDTKKRKLINT--DTID 348
Query: 500 GDVCISELVRASKISKT---SIENTEIKSEETFIDAVSRITAKQ 540
D+ S + +KT + +N ++K ++T + +I K+
Sbjct: 349 -DIFESSKTKTKTKTKTKTKTFDNKKLKKKDTTTKPLKKIKKKK 391
>UniRef50_UPI00006CFCE3 Cluster: hypothetical protein
TTHERM_00600250; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00600250 - Tetrahymena
thermophila SB210
Length = 626
Score = 39.5 bits (88), Expect = 0.76
Identities = 41/192 (21%), Positives = 85/192 (44%), Gaps = 11/192 (5%)
Query: 547 NKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNNELELSPDGNELGIVSFYDASKVFD 606
N+ E D + K + + + + + S +E E D E + A K+ +
Sbjct: 163 NEEESEDEKPKVIKNKSNGKRKLSKELNDSEEESGHEEEGDDDDEESKHLKKI-AKKLVE 221
Query: 607 DSFNQTFLQEQTNCDDCSDIIANE-YEKQEDYDKFKDTELKLDVSVNEKLDTGIKIFTPT 665
N+T+LQ+Q N DD D I E + +++ K +D E++ +V +++ ++
Sbjct: 222 QKKNKTYLQDQMNVDDIIDEIDQEDQDLKQETQKQQDDEMQKAKAVRQQIQLWKELV--F 279
Query: 666 VKPPTKNEMETKYKIPKTKQVQPFFSDYKDVGDK-VEIG-----QLVLKLHSNLS-RDQK 718
V+ +E K+P + + F S + K +E+ L+ K+ NL+ +
Sbjct: 280 VRFNMHKNLELVKKLPSPQDIGGFDSKENNQNKKYLELNILRNIDLIQKIRGNLTEKANG 339
Query: 719 PFEKVLETESIE 730
P +++L +I+
Sbjct: 340 PKDRILRKNNIK 351
>UniRef50_Q2SS84 Cluster: Membrane protein, putative; n=2;
Mycoplasma|Rep: Membrane protein, putative - Mycoplasma
capricolum subsp. capricolum (strain California kid /
ATCC27343 / NCTC 10154)
Length = 461
Score = 39.5 bits (88), Expect = 0.76
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 631 YEKQEDYDKFKDTELKLDVSVNEKLDTGIKIFTPTVKPPTKNEMETKYKIPKTKQVQPFF 690
Y K++ +K K +LKLD +N +++ IF N+ E +KI + K+ F
Sbjct: 122 YSKEDIKNKLK--QLKLDTPINVEINDVNSIFNALKDKGLSNQFEVDFKIKEIKENSAIF 179
Query: 691 SDYKDVGDKVEIGQLVLKLHSN-LSRDQKPFEKVLETESIENWRQL-LFLQKYATQDDYK 748
S +VGD G++ +K +SN L+ + + L E ++N + + KY + K
Sbjct: 180 SS-TEVGD--FYGEVEIKFNSNRLTLNSIIRDSKLRVEKLKNDEIIETLITKYPKLKEAK 236
Query: 749 PDTL 752
TL
Sbjct: 237 LSTL 240
>UniRef50_Q8IHR5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 2075
Score = 39.5 bits (88), Expect = 0.76
Identities = 52/235 (22%), Positives = 88/235 (37%), Gaps = 8/235 (3%)
Query: 318 NRTTKMNLNEHEEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQ--QR 375
N MN+N E+ D D + +N + + ED E + D D +
Sbjct: 984 NVERNMNVNNEEDVDNDGNVYKDNKEEEEEDEEEEEEEEEEEEDEEDEEDNDDDDHHHEH 1043
Query: 376 VEEDSIMGTPANRDQEVDMELDDA--EYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDG 433
E + T N D+E D E DD E +++ + N+ +NG D +
Sbjct: 1044 EHEHELHNTNENIDEEEDAEEDDEDDEEDEEEDEEEDEDEDNDDNDNGDNSDDDDDDNND 1103
Query: 434 ANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNI-DTSEIDEIN 492
N G ++D L+ K N + N N SNI DT + N
Sbjct: 1104 NNDDNNSGKKNSDRNIYNYHNYITYLKKNKHMNDKTNGDMKNVQNKCSNIRDTEDFIHYN 1163
Query: 493 VSRETADGDVCISELVRASKISKTSIENT-EIKSEETF--IDAVSRITAKQNIVK 544
+ ++ I + + K K + +T E+ ++ TF D +S+ +Q +K
Sbjct: 1164 QKKSSSLFLYDIDNMKKILKNYKKQMHDTKEVLAKTTFKMSDLISKKYKEQKCIK 1218
>UniRef50_Q4YXS7 Cluster: Erythrocyte membrane protein 3, putative;
n=8; Eukaryota|Rep: Erythrocyte membrane protein 3,
putative - Plasmodium berghei
Length = 367
Score = 39.5 bits (88), Expect = 0.76
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 469 KNERVNNPTNTDSNIDTSEIDEINVSRETADG-DVCISEL----VRASKISKTSIENTEI 523
KN+ N ++N++ ++++ I+V + A+ DV E V + + T +EN ++
Sbjct: 187 KNKEAENVDVENTNVENTDVENIDVKNKEAENVDVENKEAENVDVENTDVENTDVENIDV 246
Query: 524 KSEET-FIDAVSRITAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKP---VDCDNTEMGN 578
K++E ID ++ +N+ ++E D++NK NK VD +NT++ N
Sbjct: 247 KNKEAKNIDVKNK--EAENVDVENKEAENIDVKNKEAENVDVKNKEAENVDVENTDVEN 303
>UniRef50_Q24BA9 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 599
Score = 39.5 bits (88), Expect = 0.76
Identities = 47/226 (20%), Positives = 97/226 (42%), Gaps = 9/226 (3%)
Query: 467 KKKNERVNNPTNTDSNIDTSEIDEINVSRETADGDVCIS--ELVRASKISKTSIENTEIK 524
K N++ N ++DS + D+++ + +D DV E + KIS S E K
Sbjct: 191 KNLNQKQANQDDSDSGSASQSDDDVDNEDDRSD-DVKNEDEEDIEEDKISNLSFEQKPNK 249
Query: 525 SEETFIDAVSRITAKQNIVKLMNKSEIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNNEL 584
++ +++ S+ Q+ + + S Y + K + N + N N++N+E
Sbjct: 250 NQNQCMNSSSQDEDSQDS-DIDDNS--YQQKPKSNQNSRKQNIDMGYSNNNNNNNNNSES 306
Query: 585 ELSPDGNELGIVSFYDASKVFDDSFNQTF--LQEQTNCDDCSDIIANEYE-KQEDYDKFK 641
E DGN +Y+ S D Q+ +Q++ N N + + K+
Sbjct: 307 ECESDGNNNNNNQYYNESDQSDCEVEQSMDAIQQKKNLKSQIQQKNNSIQLVKATNQKYI 366
Query: 642 DTELKLDVSVNEKLDTGIKIFTPTVKPPTKNEMETKYKIPKTKQVQ 687
+ + + S N+K ++ + + + + +E E+K K + K++Q
Sbjct: 367 AQQNQKNSSSNQKKNSSSSSSSSSSEEDSNSEEESKEKTNQNKKIQ 412
>UniRef50_Q23KB7 Cluster: Cyclic nucleotide-binding domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Cyclic nucleotide-binding domain containing
protein - Tetrahymena thermophila SB210
Length = 1610
Score = 39.5 bits (88), Expect = 0.76
Identities = 55/259 (21%), Positives = 110/259 (42%), Gaps = 19/259 (7%)
Query: 511 SKISKTSIENTEIKSEETFIDAVSRITAKQNIVKLMN--KSEIYDLQNKFVPTAGPSNKP 568
SK K + NT++ S++ + + +Q +KL N K +N++V T
Sbjct: 530 SKFYKQTNFNTKVNSDDYQFNQ----SPQQKSIKLQNDQKENHQSQKNEYVMTKTEMPFI 585
Query: 569 VDCDNTEMGNSSNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIA 628
+ + N S E + D N L + + FN+ F ++ + +D +DI
Sbjct: 586 ASPPISNIHNKSMKEEFQNDDYNNLN-----PQMNILSNQFNENFHKQNLSSEDINDITQ 640
Query: 629 NEYEKQEDYDKFKDTELKLDVSVNEKLDTGIKIFTPTVKPPTKNEMETKYKIPKTKQVQP 688
+ +Q D+ K S E+ + IK K T N + K T Q++
Sbjct: 641 KSH-RQIQRDQRKLNVESYQNSFKEENKSSIKDSDYNFKQET-NYFQNSQKYLNTNQIKD 698
Query: 689 FFSDYKDVGDKVEIGQLVLKLHSNLS-RDQK--PFEKVLETESIENWRQLLFLQKYATQ- 744
+ ++D +K++ + + ++ S S R+ K F+K+ ++ N +++ LQ+
Sbjct: 699 NLNSFQDTDEKLDAVKSLSQIQSQGSWRNIKNVNFQKI--KPNVLNMQKMYILQQQKNNA 756
Query: 745 DDYKPDTLRTLLAGNSRYV 763
+ K D + GNS+++
Sbjct: 757 NKQKNDIFESPERGNSQHI 775
>UniRef50_Q238V3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 573
Score = 39.5 bits (88), Expect = 0.76
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Query: 692 DYKDVGDKVEIGQLVLKLHSNLSRDQKPFEKVLETESIENWRQLLFLQKYATQDDYK-PD 750
DY V D+ QL + +N DQK E++ + I++ LL + TQDD K
Sbjct: 235 DYNGVLDQEIYKQLQNDI-TNKHLDQKVTEQLQQDFIIQSSHILLIVVSNLTQDDQKLIH 293
Query: 751 TLRTLLAGNSR----YVIQPVVRPPTSEQVKKWINEQKALQLLSQFSSEQAISKNMDDFN 806
T+ LLAG + Y++ + T ++ +I + LQLL ++ + ++ N
Sbjct: 294 TISQLLAGEGKKKEVYIVHNLKETHTVNNIQNYIEK---LQLLYPLREQRINTYEAENQN 350
Query: 807 NSQALGLNEDEINSSIVSIENCESADFLTSMVI 839
N+ + + N I++ N ++ + +
Sbjct: 351 NTVYIDCINQDFNHLIMAYSNSQAGSYYNQFTL 383
>UniRef50_Q84173 Cluster: DNA polymerase; n=71; Poxviridae|Rep: DNA
polymerase - Orf virus (strain NZ2) (OV NZ-2)
Length = 1008
Score = 39.5 bits (88), Expect = 0.76
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 9/146 (6%)
Query: 1299 IYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNP-PPVALKLEKVYQPCILQTKKRYV 1357
+YGDTDS+F+ V + +G+ + + ++ E VY I+Q+KK+Y
Sbjct: 756 VYGDTDSVFLEVGASDIAFSRRVGRCLERVINEHVLFANFKVEFEAVYCNLIMQSKKKYT 815
Query: 1358 GFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQ---SLCE-LFTHGDMSVVKRLVKA 1413
F D +KG RRD P ++R+ LC L G +V ++++
Sbjct: 816 TIKFAVSDGGGSERVSKGTSETRRDVAPFHKLMIRKYKDMLCRALAEEGSGNVGVEILRS 875
Query: 1414 TLSRLA----ETSLPVHELFFTREYH 1435
L S+P+ +R +H
Sbjct: 876 LEDELTFEFEARSMPLDWFLLSRTHH 901
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.317 0.133 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,790,412,054
Number of Sequences: 1657284
Number of extensions: 75794631
Number of successful extensions: 215234
Number of sequences better than 10.0: 389
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 237
Number of HSP's that attempted gapping in prelim test: 213607
Number of HSP's gapped (non-prelim): 1426
length of query: 1644
length of database: 575,637,011
effective HSP length: 111
effective length of query: 1533
effective length of database: 391,678,487
effective search space: 600443120571
effective search space used: 600443120571
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 79 (35.9 bits)
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