Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002415-TA|BGIBMGA002415-PA|IPR006172|DNA-directed DNA
polymerase B, IPR012337|Polynucleotidyl transferase, Ribonuclease H
fold, IPR004578|DNA polymerase (pol2), IPR006133|DNA polymerase B,
exonuclease, IPR006134|DNA polymerase B region
(1644 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 28 1.8
AY341201-1|AAR13765.1| 154|Anopheles gambiae NOS protein. 26 7.1
AY341200-1|AAR13764.1| 154|Anopheles gambiae NOS protein. 26 7.1
AY341199-1|AAR13763.1| 154|Anopheles gambiae NOS protein. 26 7.1
AY341198-1|AAR13762.1| 154|Anopheles gambiae NOS protein. 26 7.1
AY341197-1|AAR13761.1| 154|Anopheles gambiae NOS protein. 26 7.1
AY341196-1|AAR13760.1| 154|Anopheles gambiae NOS protein. 26 7.1
AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein. 26 9.4
AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein. 26 9.4
AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein. 26 9.4
AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein. 26 9.4
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 26 9.4
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 26 9.4
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 28.3 bits (60), Expect = 1.8
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 359 SEDMELIDMLHDMDQQRVEEDSIMGTPANRDQEVDMELDDAEYSRIFN--DDSVCHDQNE 416
S D+ +++ + +Q + I P E++ LD+ + N DD++ +E
Sbjct: 556 SRDVRFLEVDDESKEQTYGDPKIEDNPTE-SVEIEWSLDETKREAKTNVADDTI----SE 610
Query: 417 SENNGSPLS---WHDSFWDGANIPQLDGTFDND 446
SE G S W FW+ + L G +DND
Sbjct: 611 SEFYGWDCSDDGWPQGFWNDNDNNWLRGLWDND 643
>AY341201-1|AAR13765.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1541 QREQTQSGGIEKYMSRERCAVCGVRTIV 1568
+ +QTQ+G + + ER VC +RT++
Sbjct: 27 KEKQTQNGVYKSWEPHERLPVCSLRTLL 54
>AY341200-1|AAR13764.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1541 QREQTQSGGIEKYMSRERCAVCGVRTIV 1568
+ +QTQ+G + + ER VC +RT++
Sbjct: 27 KEKQTQNGVYKSWEPHERLPVCSLRTLL 54
>AY341199-1|AAR13763.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1541 QREQTQSGGIEKYMSRERCAVCGVRTIV 1568
+ +QTQ+G + + ER VC +RT++
Sbjct: 27 KEKQTQNGVYKSWEPHERLPVCSLRTLL 54
>AY341198-1|AAR13762.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1541 QREQTQSGGIEKYMSRERCAVCGVRTIV 1568
+ +QTQ+G + + ER VC +RT++
Sbjct: 27 KEKQTQNGVYKSWEPHERLPVCSLRTLL 54
>AY341197-1|AAR13761.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1541 QREQTQSGGIEKYMSRERCAVCGVRTIV 1568
+ +QTQ+G + + ER VC +RT++
Sbjct: 27 KEKQTQNGVYKSWEPHERLPVCSLRTLL 54
>AY341196-1|AAR13760.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1541 QREQTQSGGIEKYMSRERCAVCGVRTIV 1568
+ +QTQ+G + + ER VC +RT++
Sbjct: 27 KEKQTQNGVYKSWEPHERLPVCSLRTLL 54
>AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 25.8 bits (54), Expect = 9.4
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 467 KKKNERVNNPTNTDSNIDTSEIDEINVSRETADGDVCISE--LVRASKISKTSI 518
KK N+ N N +DTS EI +RE + ++E L RA +++ ++
Sbjct: 85 KKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALTRAREVNDEAL 138
>AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 25.8 bits (54), Expect = 9.4
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 467 KKKNERVNNPTNTDSNIDTSEIDEINVSRETADGDVCISE--LVRASKISKTSI 518
KK N+ N N +DTS EI +RE + ++E L RA +++ ++
Sbjct: 85 KKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALTRAREVNDEAL 138
>AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 25.8 bits (54), Expect = 9.4
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 467 KKKNERVNNPTNTDSNIDTSEIDEINVSRETADGDVCISE--LVRASKISKTSI 518
KK N+ N N +DTS EI +RE + ++E L RA +++ ++
Sbjct: 85 KKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALTRAREVNDEAL 138
>AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 25.8 bits (54), Expect = 9.4
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 467 KKKNERVNNPTNTDSNIDTSEIDEINVSRETADGDVCISE--LVRASKISKTSI 518
KK N+ N N +DTS EI +RE + ++E L RA +++ ++
Sbjct: 85 KKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALTRAREVNDEAL 138
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 25.8 bits (54), Expect = 9.4
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 636 DYDKFKDTELKLDVSVNEKLDTGIKIFTPTVKPPTKNEMETKYKIPKTKQ 685
D D+ K + L + KLDT KI TP +K K + T+ KI T +
Sbjct: 995 DPDQIKKSGDSLAKELQSKLDTLEKIQTPNMKAMQKLDRVTE-KIQSTNE 1043
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 25.8 bits (54), Expect = 9.4
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 467 KKKNERVNNPTNTDSNIDTSEIDEINVSRETADGDVCISE--LVRASKISKTSI 518
KK N+ N N +DTS EI +RE + ++E L RA +++ ++
Sbjct: 1224 KKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQALTRAREVNDEAL 1277
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.317 0.133 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,648,683
Number of Sequences: 2123
Number of extensions: 67637
Number of successful extensions: 144
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 131
Number of HSP's gapped (non-prelim): 20
length of query: 1644
length of database: 516,269
effective HSP length: 74
effective length of query: 1570
effective length of database: 359,167
effective search space: 563892190
effective search space used: 563892190
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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