Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002415-TA|BGIBMGA002415-PA|IPR006172|DNA-directed DNA
polymerase B, IPR012337|Polynucleotidyl transferase, Ribonuclease H
fold, IPR004578|DNA polymerase (pol2), IPR006133|DNA polymerase B,
exonuclease, IPR006134|DNA polymerase B region
(1644 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058689-1|AAL13918.1| 1325|Drosophila melanogaster LD40801p pro... 733 0.0
AF298216-1|AAG30224.1| 2130|Drosophila melanogaster DNA polymera... 733 0.0
AE013599-501|AAF59191.2| 2130|Drosophila melanogaster CG1925-PA ... 733 0.0
AF298215-1|AAG30223.1| 2130|Drosophila melanogaster DNA polymera... 727 0.0
AY113526-1|AAM29531.1| 1092|Drosophila melanogaster RE60511p pro... 248 5e-65
AE014296-2611|AAF49555.1| 1092|Drosophila melanogaster CG5949-PA... 248 5e-65
X88928-1|CAA61369.1| 1092|Drosophila melanogaster DNA polymerase... 246 2e-64
AY070529-1|AAL48000.1| 746|Drosophila melanogaster GM13460p pro... 73 3e-12
AE014297-3026|AAF55908.2| 1488|Drosophila melanogaster CG6349-PA... 73 3e-12
S48157-1|AAB24152.1| 1490|Drosophila melanogaster DNA polymerase... 73 3e-12
D90310-1|BAA14340.1| 1505|Drosophila melanogaster DNA polymerase... 69 4e-11
AB011813-1|BAA32745.1| 1415|Drosophila melanogaster DNA polymera... 69 4e-11
AE014297-1204|AAF54559.2| 2762|Drosophila melanogaster CG14692-P... 37 0.27
AE014296-2257|AAF49833.1| 1544|Drosophila melanogaster CG17687-P... 36 0.36
AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-... 34 1.5
BT016065-1|AAV36950.1| 792|Drosophila melanogaster LP11827p pro... 33 2.5
AE014296-2577|AAF49579.4| 791|Drosophila melanogaster CG6169-PA... 33 2.5
AE014296-2343|AAF49771.3| 2294|Drosophila melanogaster CG32133-P... 33 2.5
BT001860-1|AAN71623.1| 236|Drosophila melanogaster RH66388p pro... 33 3.4
AY094826-1|AAM11179.1| 1266|Drosophila melanogaster LD39940p pro... 33 3.4
AE013599-2106|AAF58108.2| 1263|Drosophila melanogaster CG30089-P... 33 3.4
AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-P... 33 3.4
AE013599-615|AAF59115.1| 236|Drosophila melanogaster CG14756-PA... 33 3.4
AE013599-399|AAM68891.2| 409|Drosophila melanogaster CG11112-PB... 33 3.4
AE014298-3064|AAF50873.1| 1223|Drosophila melanogaster CG12092-P... 33 4.4
BT022798-1|AAY55214.1| 562|Drosophila melanogaster IP13650p pro... 32 5.9
BT022774-1|AAY55190.1| 420|Drosophila melanogaster IP13950p pro... 32 5.9
BT022766-1|AAY55182.1| 560|Drosophila melanogaster IP13850p pro... 32 5.9
AE014296-2087|AAF49969.1| 564|Drosophila melanogaster CG6793-PA... 32 5.9
AY118675-1|AAM50535.1| 1073|Drosophila melanogaster AT05180p pro... 32 7.8
AE014297-1565|AAF54847.1| 1059|Drosophila melanogaster CG14395-P... 32 7.8
>AY058689-1|AAL13918.1| 1325|Drosophila melanogaster LD40801p protein.
Length = 1325
Score = 733 bits (1811), Expect = 0.0
Identities = 381/845 (45%), Positives = 541/845 (64%), Gaps = 32/845 (3%)
Query: 770 PPTSEQVKKWINEQKALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSSI---VSIE 826
PP+S+ ++ ++ A L + S + + + D + + GL+ ++++ V++E
Sbjct: 422 PPSSQSSEQSVSSSAAQAELDRSSFLRQLEGSSQDRQHDLSFGLSHATLDNTFGFKVNLE 481
Query: 827 NCESA------DFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLT 880
N + A + LT + +EV S RGD+ PDP D I+ +FY++ + P+ K+
Sbjct: 482 NLQQAKADIDCNHLTIITLEVFVSTRGDLQPDPMHDEIRCLFYAIEHSLPDEKLPSKACG 541
Query: 881 GIIV---VDSSSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSW 937
I+V D S G ++ V V++E E + ++ L D DI GYEIEM+SW
Sbjct: 542 YIMVNTVQDLLSEGPFHGIDRDIEVQVVTSEAEAFEALLALCERWDADIYAGYEIEMSSW 601
Query: 938 GYVLERAEILGLDVLKDLSRI-TEKNR----QKRWMKNESDYEGRIIGRVIFNVWRLFRH 992
GYV++RA+ L ++ LSR+ T+K R + R + D E ++ GR++ +VWRL R
Sbjct: 602 GYVIDRAKHLCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGRILLDVWRLMRS 661
Query: 993 ELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQ 1052
E+AL+SY+FEN MY +L++R P ++ L++W+ S RWI +EYYL ++ GT+ +L
Sbjct: 662 EIALTSYTFENVMYHILHKRCPWHTAKSLTEWF--GSPCTRWIVMEYYLERVRGTLTLLD 719
Query: 1053 KLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAP 1112
+LD++ RTSE+A+L G+Q++EVLSRGSQFRVES+MLR A+P NL+ LSP+++ R+ MRAP
Sbjct: 720 QLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQARAHMRAP 779
Query: 1113 ETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWR 1172
E L LI EP+SRFY+DP+IVLDFQSLYPSM+IAYNYCFSTC+GRV+++ G + +EFGA +
Sbjct: 780 EYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQ 839
Query: 1173 LRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDE 1232
LR+ R L+ L+++ L+ SP G+ FVK VR G+LP Q VK+SMK+ D
Sbjct: 840 LRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHKDS 899
Query: 1233 -AVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVREN 1291
A+++ +HSRQLGLKL+ANVTYGYTAANFSGRMP VEV DSVV+KGRETLERAIKLV N
Sbjct: 900 SALQRILHSRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSVVSKGRETLERAIKLVENN 959
Query: 1292 TTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQ 1351
W +V+YGDTDSMFVLVPGR+R EAF IG++IA AVT NP PV LKLEKVYQPC+LQ
Sbjct: 960 EEWKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAKAVTEMNPQPVKLKLEKVYQPCMLQ 1019
Query: 1352 TKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLV 1411
TKKRYVG+M+E+ DQE+P YEAKGIETVRRDGCPA K+L + L LF D+S +K V
Sbjct: 1020 TKKRYVGYMYETADQEQPVYEAKGIETVRRDGCPAVAKMLEKVLRILFETQDVSKIKAYV 1079
Query: 1412 KATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVS 1471
++L + +L F +E+ G GY+P A P E+ ++ KD R +PR G RV
Sbjct: 1080 CRQFTKLLSGRANLQDLIFAKEFRGLNGYKPTACVPALELTRKWMQKDPRHVPRRGERVP 1139
Query: 1472 WLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWN 1531
+++ G PG+ L+RL R+P ++ + + + YY T+ G +V W+
Sbjct: 1140 FIIVNGPPGMQLIRLVRSPHDILANEGHKINAIYYITKAIIPPLNRCLLLIGANVHDWFA 1199
Query: 1532 ELGYN-------RTAQQREQTQ--SGGIEKYMSRERCAV-CGVRTIVRSAVCPQCAHTQR 1581
L TA + + I +Y S C + CG +T ++ +CP C
Sbjct: 1200 SLPRKLLMTPAVGTANELAGARGAKSTISQYFSTTSCVIDCGRQT--KAGICPDCLKNAT 1257
Query: 1582 ACVVL 1586
CVV+
Sbjct: 1258 TCVVV 1262
Score = 58.8 bits (136), Expect = 6e-08
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 656 DTGIKIFTPTVKPPTKNEMET---KYKIPKTKQVQPFFSDYKDVGDKVEIGQLVLKLHSN 712
D+ + P PP+ +E+ + K IP+ + +P++S+ DV E+G LVL + N
Sbjct: 190 DSNSFVIAPLELPPSYDEVVSGSRKMDIPEYEFQKPYYSNPSDVSKVTEVGFLVLHIPGN 249
Query: 713 LSRDQKPFEKVLETE-SIENW--RQLLFLQKYATQDDYKPD-TLRTLLAGNSRYVIQPVV 768
D PF+ +L + + +W RQL+ + A ++ + +R + R I+P
Sbjct: 250 KLNDCDPFQSILGNDRGLASWRRRQLIAIGGLAMLQRHRGEQKVREYFSTQQRIAIEPAQ 309
Query: 769 RPPTSEQVKKWINEQKALQLLSQFSSEQAISKNMD 803
PT ++ K W+ KA +LL Q + S ++D
Sbjct: 310 LAPTWQEAKIWL---KAKELLRQREEPKKSSDDID 341
>AF298216-1|AAG30224.1| 2130|Drosophila melanogaster DNA polymerase
zeta catalyticsubunit protein.
Length = 2130
Score = 733 bits (1811), Expect = 0.0
Identities = 381/845 (45%), Positives = 541/845 (64%), Gaps = 32/845 (3%)
Query: 770 PPTSEQVKKWINEQKALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSSI---VSIE 826
PP+S+ ++ ++ A L + S + + + D + + GL+ ++++ V++E
Sbjct: 1227 PPSSQSSEQSVSSSAAQAELDRSSFLRQLEGSSQDRQHDLSFGLSHATLDNTFGFKVNLE 1286
Query: 827 NCESA------DFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLT 880
N + A + LT + +EV S RGD+ PDP D I+ +FY++ + P+ K+
Sbjct: 1287 NLQQAKADIDCNHLTIITLEVFVSTRGDLQPDPMHDEIRCLFYAIEHSLPDEKLPSKACG 1346
Query: 881 GIIV---VDSSSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSW 937
I+V D S G ++ V V++E E + ++ L D DI GYEIEM+SW
Sbjct: 1347 YIMVNTVQDLLSEGPFHGIDRDIEVQVVTSEAEAFEALLALCERWDADIYAGYEIEMSSW 1406
Query: 938 GYVLERAEILGLDVLKDLSRI-TEKNR----QKRWMKNESDYEGRIIGRVIFNVWRLFRH 992
GYV++RA+ L ++ LSR+ T+K R + R + D E ++ GR++ +VWRL R
Sbjct: 1407 GYVIDRAKHLCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGRILLDVWRLMRS 1466
Query: 993 ELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQ 1052
E+AL+SY+FEN MY +L++R P ++ L++W+ S RWI +EYYL ++ GT+ +L
Sbjct: 1467 EIALTSYTFENVMYHILHKRCPWHTAKSLTEWF--GSPCTRWIVMEYYLERVRGTLTLLD 1524
Query: 1053 KLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAP 1112
+LD++ RTSE+A+L G+Q++EVLSRGSQFRVES+MLR A+P NL+ LSP+++ R+ MRAP
Sbjct: 1525 QLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQARAHMRAP 1584
Query: 1113 ETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWR 1172
E L LI EP+SRFY+DP+IVLDFQSLYPSM+IAYNYCFSTC+GRV+++ G + +EFGA +
Sbjct: 1585 EYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQ 1644
Query: 1173 LRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDE 1232
LR+ R L+ L+++ L+ SP G+ FVK VR G+LP Q VK+SMK+ D
Sbjct: 1645 LRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHKDS 1704
Query: 1233 -AVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVREN 1291
A+++ +HSRQLGLKL+ANVTYGYTAANFSGRMP VEV DSVV+KGRETLERAIKLV N
Sbjct: 1705 SALQRILHSRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSVVSKGRETLERAIKLVENN 1764
Query: 1292 TTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQ 1351
W +V+YGDTDSMFVLVPGR+R EAF IG++IA AVT NP PV LKLEKVYQPC+LQ
Sbjct: 1765 EEWKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAKAVTEMNPQPVKLKLEKVYQPCMLQ 1824
Query: 1352 TKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLV 1411
TKKRYVG+M+E+ DQE+P YEAKGIETVRRDGCPA K+L + L LF D+S +K V
Sbjct: 1825 TKKRYVGYMYETADQEQPVYEAKGIETVRRDGCPAVAKMLEKVLRILFETQDVSKIKAYV 1884
Query: 1412 KATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVS 1471
++L + +L F +E+ G GY+P A P E+ ++ KD R +PR G RV
Sbjct: 1885 CRQFTKLLSGRANLQDLIFAKEFRGLNGYKPTACVPALELTRKWMQKDPRHVPRRGERVP 1944
Query: 1472 WLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWN 1531
+++ G PG+ L+RL R+P ++ + + + YY T+ G +V W+
Sbjct: 1945 FIIVNGPPGMQLIRLVRSPHDILANEGHKINAIYYITKAIIPPLNRCLLLIGANVHDWFA 2004
Query: 1532 ELGYN-------RTAQQREQTQ--SGGIEKYMSRERCAV-CGVRTIVRSAVCPQCAHTQR 1581
L TA + + I +Y S C + CG +T ++ +CP C
Sbjct: 2005 SLPRKLLMTPAVGTANELAGARGAKSTISQYFSTTSCVIDCGRQT--KAGICPDCLKNAT 2062
Query: 1582 ACVVL 1586
CVV+
Sbjct: 2063 TCVVV 2067
Score = 223 bits (544), Expect = 2e-57
Identities = 147/460 (31%), Positives = 238/460 (51%), Gaps = 39/460 (8%)
Query: 1 MTKPTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEP 60
M KP G+D YSE RG +IK+VPV+R+FG G K C+H+HGVFPY YIP ++ E
Sbjct: 23 MEKPQFGMDPCYSELRGKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPYLYIPYDKKDFES 82
Query: 61 --QLLYQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPG 118
+ + Q+A LDKA+NI++ Q +S+ QHV+KI LVKG+PFYGYH EH +LK++++ P
Sbjct: 83 LERGILQMAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYHRVEHQFLKIYMFNPR 142
Query: 119 LIKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMS--DIDLQSVQFRKS---G 173
+++A L SGAIL + F PHESH+ + LQF ID+NL+GMS + L+ ++FR++
Sbjct: 143 FVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRNHDDD 202
Query: 174 FSQKSNEVLYDTKENTLTSESSCH-YEADCMASHIINR-QRIGKG-DGIENPGLEEVWNQ 230
+N + T + +C E D ++ I+NR Q + K NPG+E +WN
Sbjct: 203 VIPYANVKQAQLLDITTAKKVACSALEVDVSSNFILNRFQLVAKSKSNHTNPGIEAIWND 262
Query: 231 ELERRKQL---NMSLASKSLSQGLTSLKQVETDSHYKFE----NIF-AVKLSNKIDKPVL 282
E RR++L + + ++ + L+ T ++ E +IF L +K+ +
Sbjct: 263 EKLRRQKLVEKHTDAGDEEKAEAVPVLELPPTQERHQIEIAESDIFYRTALESKL---MT 319
Query: 283 LEHAYYPAETLGDTQLFKAVDVSIHLPSKDLDLTLNRTTKMNLN----EHEEEDLDTTIV 338
LE + +TL D + + +P K+ N E +D +V
Sbjct: 320 LEQSTLSEQTLSDQTILPQATMQTTMPGTKAQKRRFNLQKLLANAVYPEECSQDQQQLLV 379
Query: 339 DENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDSIMGTPANRD--------Q 390
+ + + N S V L++ D D+D+ V+E+ I+ +
Sbjct: 380 NASFIQNHVTCGYSSSVSLSTSK----DESDDLDETVVDEELILSLTQPHGAIPHDATLR 435
Query: 391 EVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSF 430
E D+EL DA ++ + + + +++ +PLS H F
Sbjct: 436 EEDLELLDA--LQLLEEQNESESHVDLDSSLAPLSQHKKF 473
Score = 58.8 bits (136), Expect = 6e-08
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 656 DTGIKIFTPTVKPPTKNEMET---KYKIPKTKQVQPFFSDYKDVGDKVEIGQLVLKLHSN 712
D+ + P PP+ +E+ + K IP+ + +P++S+ DV E+G LVL + N
Sbjct: 995 DSNSFVIAPLELPPSYDEVVSGSRKMDIPEYEFQKPYYSNPSDVSKVTEVGFLVLHIPGN 1054
Query: 713 LSRDQKPFEKVLETE-SIENW--RQLLFLQKYATQDDYKPD-TLRTLLAGNSRYVIQPVV 768
D PF+ +L + + +W RQL+ + A ++ + +R + R I+P
Sbjct: 1055 KLNDCDPFQSILGNDRGLASWRRRQLIAIGGLAMLQRHRGEQKVREYFSTQQRIAIEPAQ 1114
Query: 769 RPPTSEQVKKWINEQKALQLLSQFSSEQAISKNMD 803
PT ++ K W+ KA +LL Q + S ++D
Sbjct: 1115 LAPTWQEAKIWL---KAKELLRQREEPKKSSDDID 1146
>AE013599-501|AAF59191.2| 2130|Drosophila melanogaster CG1925-PA
protein.
Length = 2130
Score = 733 bits (1811), Expect = 0.0
Identities = 381/845 (45%), Positives = 541/845 (64%), Gaps = 32/845 (3%)
Query: 770 PPTSEQVKKWINEQKALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSSI---VSIE 826
PP+S+ ++ ++ A L + S + + + D + + GL+ ++++ V++E
Sbjct: 1227 PPSSQSSEQSVSSSAAQAELDRSSFLRQLEGSSQDRQHDLSFGLSHATLDNTFGFKVNLE 1286
Query: 827 NCESA------DFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLT 880
N + A + LT + +EV S RGD+ PDP D I+ +FY++ + P+ K+
Sbjct: 1287 NLQQAKADIDCNHLTIITLEVFVSTRGDLQPDPMHDEIRCLFYAIEHSLPDEKLPSKACG 1346
Query: 881 GIIV---VDSSSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSW 937
I+V D S G ++ V V++E E + ++ L D DI GYEIEM+SW
Sbjct: 1347 YIMVNTVQDLLSEGPFHGIDRDIEVQVVTSEAEAFEALLALCERWDADIYAGYEIEMSSW 1406
Query: 938 GYVLERAEILGLDVLKDLSRI-TEKNR----QKRWMKNESDYEGRIIGRVIFNVWRLFRH 992
GYV++RA+ L ++ LSR+ T+K R + R + D E ++ GR++ +VWRL R
Sbjct: 1407 GYVIDRAKHLCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGRILLDVWRLMRS 1466
Query: 993 ELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQ 1052
E+AL+SY+FEN MY +L++R P ++ L++W+ S RWI +EYYL ++ GT+ +L
Sbjct: 1467 EIALTSYTFENVMYHILHKRCPWHTAKSLTEWF--GSPCTRWIVMEYYLERVRGTLTLLD 1524
Query: 1053 KLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAP 1112
+LD++ RTSE+A+L G+Q++EVLSRGSQFRVES+MLR A+P NL+ LSP+++ R+ MRAP
Sbjct: 1525 QLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQARAHMRAP 1584
Query: 1113 ETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWR 1172
E L LI EP+SRFY+DP+IVLDFQSLYPSM+IAYNYCFSTC+GRV+++ G + +EFGA +
Sbjct: 1585 EYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQ 1644
Query: 1173 LRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDE 1232
LR+ R L+ L+++ L+ SP G+ FVK VR G+LP Q VK+SMK+ D
Sbjct: 1645 LRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHKDS 1704
Query: 1233 -AVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVREN 1291
A+++ +HSRQLGLKL+ANVTYGYTAANFSGRMP VEV DSVV+KGRETLERAIKLV N
Sbjct: 1705 SALQRILHSRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSVVSKGRETLERAIKLVENN 1764
Query: 1292 TTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQ 1351
W +V+YGDTDSMFVLVPGR+R EAF IG++IA AVT NP PV LKLEKVYQPC+LQ
Sbjct: 1765 EEWKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAKAVTEMNPQPVKLKLEKVYQPCMLQ 1824
Query: 1352 TKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLV 1411
TKKRYVG+M+E+ DQE+P YEAKGIETVRRDGCPA K+L + L LF D+S +K V
Sbjct: 1825 TKKRYVGYMYETADQEQPVYEAKGIETVRRDGCPAVAKMLEKVLRILFETQDVSKIKAYV 1884
Query: 1412 KATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVS 1471
++L + +L F +E+ G GY+P A P E+ ++ KD R +PR G RV
Sbjct: 1885 CRQFTKLLSGRANLQDLIFAKEFRGLNGYKPTACVPALELTRKWMQKDPRHVPRRGERVP 1944
Query: 1472 WLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWN 1531
+++ G PG+ L+RL R+P ++ + + + YY T+ G +V W+
Sbjct: 1945 FIIVNGPPGMQLIRLVRSPHDILANEGHKINAIYYITKAIIPPLNRCLLLIGANVHDWFA 2004
Query: 1532 ELGYN-------RTAQQREQTQ--SGGIEKYMSRERCAV-CGVRTIVRSAVCPQCAHTQR 1581
L TA + + I +Y S C + CG +T ++ +CP C
Sbjct: 2005 SLPRKLLMTPAVGTANELAGARGAKSTISQYFSTTSCVIDCGRQT--KAGICPDCLKNAT 2062
Query: 1582 ACVVL 1586
CVV+
Sbjct: 2063 TCVVV 2067
Score = 223 bits (544), Expect = 2e-57
Identities = 147/460 (31%), Positives = 238/460 (51%), Gaps = 39/460 (8%)
Query: 1 MTKPTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEP 60
M KP G+D YSE RG +IK+VPV+R+FG G K C+H+HGVFPY YIP ++ E
Sbjct: 23 MEKPQFGMDPCYSELRGKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPYLYIPYDKKDFES 82
Query: 61 --QLLYQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPG 118
+ + Q+A LDKA+NI++ Q +S+ QHV+KI LVKG+PFYGYH EH +LK++++ P
Sbjct: 83 LERGILQMAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYHRVEHQFLKIYMFNPR 142
Query: 119 LIKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMS--DIDLQSVQFRKS---G 173
+++A L SGAIL + F PHESH+ + LQF ID+NL+GMS + L+ ++FR++
Sbjct: 143 FVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRNHDDD 202
Query: 174 FSQKSNEVLYDTKENTLTSESSCH-YEADCMASHIINR-QRIGKG-DGIENPGLEEVWNQ 230
+N + T + +C E D ++ I+NR Q + K NPG+E +WN
Sbjct: 203 VIPYANVKQAQLLDITTAKKVACSALEVDVSSNFILNRFQLVAKSKSNHTNPGIEAIWND 262
Query: 231 ELERRKQL---NMSLASKSLSQGLTSLKQVETDSHYKFE----NIF-AVKLSNKIDKPVL 282
E RR++L + + ++ + L+ T ++ E +IF L +K+ +
Sbjct: 263 EKLRRQKLVEKHTDAGDEEKAEAVPVLELPPTQERHQIEIAESDIFYRTALESKL---MT 319
Query: 283 LEHAYYPAETLGDTQLFKAVDVSIHLPSKDLDLTLNRTTKMNLN----EHEEEDLDTTIV 338
LE + +TL D + + +P K+ N E +D +V
Sbjct: 320 LEQSTLSEQTLSDQTILPQATMQTTMPGTKAQKRRFNLQKLLANAVYPEECSQDQQQLLV 379
Query: 339 DENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDSIMGTPANRD--------Q 390
+ + + N S V L++ D D+D+ V+E+ I+ +
Sbjct: 380 NASFIQNHVTCGYSSSVSLSTSK----DESDDLDETVVDEELILSLTQPHGAIPHDATLR 435
Query: 391 EVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSF 430
E D+EL DA ++ + + + +++ +PLS H F
Sbjct: 436 EEDLELLDA--LQLLEEQNESESHVDLDSSLAPLSQHKKF 473
Score = 58.8 bits (136), Expect = 6e-08
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 656 DTGIKIFTPTVKPPTKNEMET---KYKIPKTKQVQPFFSDYKDVGDKVEIGQLVLKLHSN 712
D+ + P PP+ +E+ + K IP+ + +P++S+ DV E+G LVL + N
Sbjct: 995 DSNSFVIAPLELPPSYDEVVSGSRKMDIPEYEFQKPYYSNPSDVSKVTEVGFLVLHIPGN 1054
Query: 713 LSRDQKPFEKVLETE-SIENW--RQLLFLQKYATQDDYKPD-TLRTLLAGNSRYVIQPVV 768
D PF+ +L + + +W RQL+ + A ++ + +R + R I+P
Sbjct: 1055 KLNDCDPFQSILGNDRGLASWRRRQLIAIGGLAMLQRHRGEQKVREYFSTQQRIAIEPAQ 1114
Query: 769 RPPTSEQVKKWINEQKALQLLSQFSSEQAISKNMD 803
PT ++ K W+ KA +LL Q + S ++D
Sbjct: 1115 LAPTWQEAKIWL---KAKELLRQREEPKKSSDDID 1146
>AF298215-1|AAG30223.1| 2130|Drosophila melanogaster DNA polymerase
zeta catalyticsubunit protein.
Length = 2130
Score = 727 bits (1797), Expect = 0.0
Identities = 379/845 (44%), Positives = 540/845 (63%), Gaps = 32/845 (3%)
Query: 770 PPTSEQVKKWINEQKALQLLSQFSSEQAISKNMDDFNNSQALGLNEDEINSSI---VSIE 826
PP+S+ ++ + A L + S + + + D + + GL+ ++++ V++E
Sbjct: 1227 PPSSQSSEQSVFSSAAQAELDRSSFLRQLEGSSQDRQHDLSFGLSHATLDNTFGFKVNLE 1286
Query: 827 NCESA------DFLTSMVIEVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLT 880
N + A + LT + +EV S RGD+ PDP D I+ +FY++ + P+ K+
Sbjct: 1287 NLQQAKADIDCNHLTIITLEVFVSTRGDLQPDPMHDEIRCLFYAIEHSLPDEKLPSKACG 1346
Query: 881 GIIV---VDSSSRKYLDGCVFNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSW 937
I+V D S G ++ V V++E E + ++ L D DI GYEIEM+SW
Sbjct: 1347 YIMVNTVQDLLSEGPFHGIDRDIEVQVVTSEAEAFEALLALCERWDADIYAGYEIEMSSW 1406
Query: 938 GYVLERAEILGLDVLKDLSRI-TEKNR----QKRWMKNESDYEGRIIGRVIFNVWRLFRH 992
GYV++RA+ L ++ LSR+ T+K R + R + D E ++ GR++ +VWRL R
Sbjct: 1407 GYVIDRAKHLCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGRILLDVWRLMRS 1466
Query: 993 ELALSSYSFENCMYEVLNERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQ 1052
E+AL+SY+FEN MY +L++R P ++ L++W+ S RWI +EYYL ++ GT+ +L+
Sbjct: 1467 EIALTSYTFENVMYHILHKRCPWHTAKSLTEWF--GSPCTRWIVMEYYLERVRGTLTLLE 1524
Query: 1053 KLDIINRTSELARLFGLQWWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAP 1112
+LD++ RTSE+A+L G+Q++EVLSRGSQFRVES+MLR A+P NL+ LSP+++ R+ MRAP
Sbjct: 1525 QLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQARAHMRAP 1584
Query: 1113 ETLPLIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWR 1172
E L LI EP+SRFY+DP+IVLDFQSL+PSM+IAYNYCFSTC+GRV+++ G + +EFGA +
Sbjct: 1585 EYLALIMEPQSRFYADPLIVLDFQSLHPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQ 1644
Query: 1173 LRIPRSKLEALVKNSLIHWSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDE 1232
LR+ R L+ L+++ L+ SP G+ FVK VR G+LP Q VK+SMK+ D
Sbjct: 1645 LRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHKDS 1704
Query: 1233 -AVKKAMHSRQLGLKLIANVTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVREN 1291
A+++ +HSRQLGLKL+ANVTYGYTAANFSGRMP VEV DSVV+KGRETLERAIKLV N
Sbjct: 1705 SALQRILHSRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSVVSKGRETLERAIKLVENN 1764
Query: 1292 TTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQ 1351
W +V+YGDTDSMFVLVPGR+R EAF IG++IA AVT NP PV LKLEKVYQPC+LQ
Sbjct: 1765 EEWKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAKAVTEMNPQPVKLKLEKVYQPCMLQ 1824
Query: 1352 TKKRYVGFMFESPDQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLV 1411
TKKRYVG+M+E+ DQE+P YEAKGIET RRDGCPA K+L + L LF D+S +K V
Sbjct: 1825 TKKRYVGYMYETADQEQPVYEAKGIETERRDGCPAVAKMLEKVLRILFETQDVSKIKAYV 1884
Query: 1412 KATLSRLAETSLPVHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVS 1471
++L + +L F +E+ G GY+P A P E+ ++ KD R +PR G RV
Sbjct: 1885 CRQFTKLLSGRANLQDLIFAKEFRGLNGYKPTACVPALELTRKWMQKDPRHVPRRGERVP 1944
Query: 1472 WLVTCGAPGVPLVRLARTPQELTRDRSLRPHVAYYATRVXXXXXXXXXXXXGVDVFKWWN 1531
+++ G PG+ L+RL R+P ++ + + + YY T+ G +V W+
Sbjct: 1945 FIIVNGPPGMQLIRLVRSPHDILANEGHKINAIYYITKAIIPPLNRCLLLIGANVHDWFA 2004
Query: 1532 ELGYN-------RTAQQ--REQTQSGGIEKYMSRERCAV-CGVRTIVRSAVCPQCAHTQR 1581
L TA + + I +Y S C + CG +T ++ +CP C
Sbjct: 2005 SLPRKLLMTPAVGTANELAGPRGAKSTISQYFSTTSCVIDCGRQT--KAGICPDCLKNAT 2062
Query: 1582 ACVVL 1586
CVV+
Sbjct: 2063 TCVVV 2067
Score = 224 bits (548), Expect = 7e-58
Identities = 148/460 (32%), Positives = 241/460 (52%), Gaps = 39/460 (8%)
Query: 1 MTKPTAGLDVTYSEFRGTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEP 60
M KP G+D YSE RG +IK+VPV+R+FG G K C+H+HGVFPY YIP ++ E
Sbjct: 23 MEKPQFGMDPCYSELRGKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPYLYIPYDKKDFES 82
Query: 61 --QLLYQIAASLDKALNIAMKQATSSNQHVYKISLVKGLPFYGYHDKEHLYLKVFLYRPG 118
+ + Q+A LDKA+NI++ Q +S+ QHV+KI LVKG+PFYGYH EH +LK++++ P
Sbjct: 83 LERGILQMAVHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYHRVEHQFLKIYMFNPR 142
Query: 119 LIKQAVELFSSGAILGQTFQPHESHLNFTLQFFIDFNLFGMS--DIDLQSVQFRKS---G 173
+++A L SGAIL + F PHESH+ + LQF ID+NL+GMS + L+ ++FR++
Sbjct: 143 FVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRNHDDD 202
Query: 174 FSQKSNEVLYDTKENTLTSESSCH-YEADCMASHIINR-QRIGKG-DGIENPGLEEVWNQ 230
+N + T + +C E D ++ I+NR Q + K NPG+E +WN
Sbjct: 203 VIPYANVKQAQLLDITTAKKVACSALEVDVSSNFILNRFQLVAKSKSNHTNPGIEAIWND 262
Query: 231 ELERRKQL---NMSLASKSLSQGLTSLKQVETDSHYKFE----NIF-AVKLSNKIDKPVL 282
E RR++L + + ++ + L+ T ++ E +IF L +K+ +
Sbjct: 263 EKLRRQKLVEKHTDAGDEEKAEAVPVLELPPTQERHQIEIAESDIFYRTALESKL---MT 319
Query: 283 LEHAYYPAETLGDTQLFKAVDVSIHLPSKDLDLTLNRTTKMNLN----EHEEEDLDTTIV 338
LE + +TL D + V + +P K+ N E +D +V
Sbjct: 320 LEQSTLSEQTLSDQTILPQVTMQTTMPGTKAQKRRFNLQKLLANAVYPEECSQDQQQLLV 379
Query: 339 DENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDSIMGTPANRD--------Q 390
+ + + N ++ YS + S + D D+D+ V+E+ I+ +
Sbjct: 380 NASFIQN-HVTCGYSNSVSLSTSKDESD---DLDETVVDEELILSLTQPHGAIPHDATLR 435
Query: 391 EVDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSF 430
E D+EL DA ++ + + + +++ +PLS H F
Sbjct: 436 EEDLELLDA--LQLLEEQNESESHVDLDSSLAPLSQHKKF 473
Score = 58.4 bits (135), Expect = 8e-08
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 656 DTGIKIFTPTVKPPTKNEMET---KYKIPKTKQVQPFFSDYKDVGDKVEIGQLVLKLHSN 712
D+ + P PP+ +E+ + K IP+ + +P++S+ DV E+G LVL + N
Sbjct: 995 DSNSFVIAPLELPPSYDEVVSGSRKMGIPEYEFQKPYYSNPSDVSKVTEVGFLVLHIPGN 1054
Query: 713 LSRDQKPFEKVLETE-SIENW--RQLLFLQKYATQDDYKPD-TLRTLLAGNSRYVIQPVV 768
D PF+ +L + + +W RQL+ + A ++ + +R + R I+P
Sbjct: 1055 KLNDCDPFQSILGNDRGLASWRRRQLIAIGGLAMLQRHRGEQKVREYFSTQQRIAIEPAQ 1114
Query: 769 RPPTSEQVKKWINEQKALQLLSQFSSEQAISKNMD 803
PT ++ K W+ KA +LL Q + S ++D
Sbjct: 1115 LAPTWQEAKIWL---KAKELLRQREEPKKSSDDID 1146
>AY113526-1|AAM29531.1| 1092|Drosophila melanogaster RE60511p protein.
Length = 1092
Score = 248 bits (607), Expect = 5e-65
Identities = 189/666 (28%), Positives = 307/666 (46%), Gaps = 52/666 (7%)
Query: 840 EVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGIIVVDSSSRKYLDGC--V 897
++ + R + P+ +DP+ + VI F++ T L+ C +
Sbjct: 300 DIECAGRKGIFPEAKIDPVIQIANMVIRQGEREPFIRNVFT------------LNECAPI 347
Query: 898 FNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSR 957
V+ E + +D+ V DPDI+ GY I + Y+L RA L + + L R
Sbjct: 348 IGSQVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFDFPYLLNRAAHLKVRNFEYLGR 407
Query: 958 IT-------EKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLN 1010
I E+ Q + M + GRV F++ + + L SY+ Y L
Sbjct: 408 IKNIRSVIKEQMLQSKQMGRRENQYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQ 467
Query: 1011 ERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQ 1070
E+ ++ ++D + + R + + Y L +R+L+KL I E+AR+ G+
Sbjct: 468 EQKEDVHHSIITDLQNGDEQTRRRLAM-YCLKDAYLPLRLLEKLMAIVNYMEMARVTGVP 526
Query: 1071 WWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPV 1130
+L+RG Q +V S +LR A+ I S T + T + EP+ +Y+DP+
Sbjct: 527 LESLLTRGQQIKVLSQLLRKAKTKGFIMPSYTSQGSDEQYEGAT---VIEPKRGYYADPI 583
Query: 1131 IVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIH 1190
LDF SLYPS+M+A+N C++T + G R ++ + + +++ +
Sbjct: 584 STLDFASLYPSIMMAHNLCYTTLV-------------LGGTREKL---RQQENLQDDQVE 627
Query: 1191 WSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIAN 1250
+P FVK+ VRRG+LP + K +K++ D +K + RQL LK+ AN
Sbjct: 628 RTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLKVETDPFKRKVLDGRQLALKISAN 687
Query: 1251 VTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTW------NAKVIYGDTD 1304
YG+T A G++PC+E++ SV A GR +E V + T NA VIYGDTD
Sbjct: 688 SVYGFTGAQV-GKLPCLEISGSVTAYGRTMIEMTKNEVESHYTQANGYENNAVVIYGDTD 746
Query: 1305 SMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESP 1364
S+ V ++ + E+G++ A+ V++ P+ L+ EKVY P +L KKRY G F P
Sbjct: 747 SVMVNFGVKTLERSMELGREAAELVSSKFVHPIKLEFEKVYYPYLLINKKRYAGLYFTRP 806
Query: 1365 DQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLP 1424
D + KGIETVRRD P L+ L +L D VK ++ L +
Sbjct: 807 D-TYDKMDCKGIETVRRDNSPLVANLMNSCLQKLLIERDPDGAVAYVKQVIADLLCNRID 865
Query: 1425 VHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLV 1484
+ L T+E + Y A E+A ++ +D P+ G RV +++ A P
Sbjct: 866 ISHLVITKEL-AKTDY--AAKQAHVELAAKMKKRDPGTAPKLGDRVPYVICAAAKNTPAY 922
Query: 1485 RLARTP 1490
+ A P
Sbjct: 923 QKAEDP 928
Score = 79.4 bits (187), Expect = 4e-14
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
Query: 17 GTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNI 76
G I VPV+R+FG +G C H+HG PYFYI P+Q E ++ +LD+ +
Sbjct: 96 GAQIGPVPVVRMFGVTMEGNSVCCHVHGFCPYFYIEAPSQFEEHH-CEKLQKALDQKVIA 154
Query: 77 AMKQATSSNQH-VYKISLVKGLPFYGYH-DKEHLYLKVFLYRPGLIKQAVELFSSGAILG 134
++ + Q V + LV+ L +GY+ DK+ Y+K+ + P + A L I+
Sbjct: 155 DIRNNKDNVQEAVLMVELVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMS 214
Query: 135 ----QTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFR 170
Q + E++++F ++F +D ++ G + I+L +R
Sbjct: 215 EIDFQDCRAFENNIDFDIRFMVDTDVVGCNWIELPMGHWR 254
>AE014296-2611|AAF49555.1| 1092|Drosophila melanogaster CG5949-PA
protein.
Length = 1092
Score = 248 bits (607), Expect = 5e-65
Identities = 189/666 (28%), Positives = 307/666 (46%), Gaps = 52/666 (7%)
Query: 840 EVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGIIVVDSSSRKYLDGC--V 897
++ + R + P+ +DP+ + VI F++ T L+ C +
Sbjct: 300 DIECAGRKGIFPEAKIDPVIQIANMVIRQGEREPFIRNVFT------------LNECAPI 347
Query: 898 FNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSR 957
V+ E + +D+ V DPDI+ GY I + Y+L RA L + + L R
Sbjct: 348 IGSQVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFDFPYLLNRAAHLKVRNFEYLGR 407
Query: 958 IT-------EKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLN 1010
I E+ Q + M + GRV F++ + + L SY+ Y L
Sbjct: 408 IKNIRSVIKEQMLQSKQMGRRENQYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQ 467
Query: 1011 ERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQ 1070
E+ ++ ++D + + R + + Y L +R+L+KL I E+AR+ G+
Sbjct: 468 EQKEDVHHSIITDLQNGDEQTRRRLAM-YCLKDAYLPLRLLEKLMAIVNYMEMARVTGVP 526
Query: 1071 WWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPV 1130
+L+RG Q +V S +LR A+ I S T + T + EP+ +Y+DP+
Sbjct: 527 LESLLTRGQQIKVLSQLLRKAKTKGFIMPSYTSQGSDEQYEGAT---VIEPKRGYYADPI 583
Query: 1131 IVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIH 1190
LDF SLYPS+M+A+N C++T + G R ++ + + +++ +
Sbjct: 584 STLDFASLYPSIMMAHNLCYTTLV-------------LGGTREKL---RQQENLQDDQVE 627
Query: 1191 WSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIAN 1250
+P FVK+ VRRG+LP + K +K++ D +K + RQL LK+ AN
Sbjct: 628 RTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLKVETDPFKRKVLDGRQLALKISAN 687
Query: 1251 VTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTW------NAKVIYGDTD 1304
YG+T A G++PC+E++ SV A GR +E V + T NA VIYGDTD
Sbjct: 688 SVYGFTGAQV-GKLPCLEISGSVTAYGRTMIEMTKNEVESHYTQANGYENNAVVIYGDTD 746
Query: 1305 SMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESP 1364
S+ V ++ + E+G++ A+ V++ P+ L+ EKVY P +L KKRY G F P
Sbjct: 747 SVMVNFGVKTLERSMELGREAAELVSSKFVHPIKLEFEKVYYPYLLINKKRYAGLYFTRP 806
Query: 1365 DQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLP 1424
D + KGIETVRRD P L+ L +L D VK ++ L +
Sbjct: 807 D-TYDKMDCKGIETVRRDNSPLVANLMNSCLQKLLIERDPDGAVAYVKQVIADLLCNRID 865
Query: 1425 VHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLV 1484
+ L T+E + Y A E+A ++ +D P+ G RV +++ A P
Sbjct: 866 ISHLVITKEL-AKTDY--AAKQAHVELAAKMKKRDPGTAPKLGDRVPYVICAAAKNTPAY 922
Query: 1485 RLARTP 1490
+ A P
Sbjct: 923 QKAEDP 928
Score = 79.4 bits (187), Expect = 4e-14
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
Query: 17 GTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNI 76
G I VPV+R+FG +G C H+HG PYFYI P+Q E ++ +LD+ +
Sbjct: 96 GAQIGPVPVVRMFGVTMEGNSVCCHVHGFCPYFYIEAPSQFEEHH-CEKLQKALDQKVIA 154
Query: 77 AMKQATSSNQH-VYKISLVKGLPFYGYH-DKEHLYLKVFLYRPGLIKQAVELFSSGAILG 134
++ + Q V + LV+ L +GY+ DK+ Y+K+ + P + A L I+
Sbjct: 155 DIRNNKDNVQEAVLMVELVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMS 214
Query: 135 ----QTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFR 170
Q + E++++F ++F +D ++ G + I+L +R
Sbjct: 215 EIDFQDCRAFENNIDFDIRFMVDTDVVGCNWIELPMGHWR 254
>X88928-1|CAA61369.1| 1092|Drosophila melanogaster DNA polymerase
delta protein.
Length = 1092
Score = 246 bits (603), Expect = 2e-64
Identities = 189/666 (28%), Positives = 306/666 (45%), Gaps = 52/666 (7%)
Query: 840 EVHTSVRGDMHPDPAVDPIKAVFYSVINDCPNNHFLKKSLTGIIVVDSSSRKYLDGC--V 897
++ + R + P+ +DP+ + VI F++ T L+ C +
Sbjct: 300 DIECAGRKGIFPEAKIDPVIQIANMVIRQGEREPFIRNVFT------------LNECAPI 347
Query: 898 FNVPVIYVSNEIETIDEVIKLVNIHDPDIMCGYEIEMNSWGYVLERAEILGLDVLKDLSR 957
V+ E + +D+ V DPDI+ GY I + Y+L RA L + + L R
Sbjct: 348 IGSQVLCHDKETQMLDKWSAFVREVDPDILTGYNINNFDFPYLLNRAAHLKVRNFEYLGR 407
Query: 958 IT-------EKNRQKRWMKNESDYEGRIIGRVIFNVWRLFRHELALSSYSFENCMYEVLN 1010
I E+ Q + M + GRV F++ + + L SY+ Y L
Sbjct: 408 IKNIRSVIKEQMLQSKQMGRRENQYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQ 467
Query: 1011 ERVPSYSYAQLSDWWCDESKMLRWIPVEYYLTKLSGTVRMLQKLDIINRTSELARLFGLQ 1070
E+ ++ ++D + + R + Y L +R+L+KL I E+AR+ G+
Sbjct: 468 EQKEDVHHSIITDLQNGDEQTRRRSAM-YCLKDAYLPLRLLEKLMAIVNYMEMARVTGVP 526
Query: 1071 WWEVLSRGSQFRVESLMLRAARPLNLIALSPTIKQRSTMRAPETLPLIFEPESRFYSDPV 1130
+L+RG Q +V S +LR A+ I S T + T + EP+ +Y+DP+
Sbjct: 527 LESLLTRGQQIKVLSQLLRKAKTKGFIMPSYTSQGSDEQYEGAT---VIEPKRGYYADPI 583
Query: 1131 IVLDFQSLYPSMMIAYNYCFSTCIGRVQNINGETAYEFGAWRLRIPRSKLEALVKNSLIH 1190
LDF SLYPS+M+A+N C++T + G R ++ + + +++ +
Sbjct: 584 STLDFASLYPSIMMAHNLCYTTLV-------------LGGTREKL---RQQENLQDDQVE 627
Query: 1191 WSPVGIGFVKTSVRRGVLPXXXXXXXXXXQAVKKSMKMQNDEAVKKAMHSRQLGLKLIAN 1250
+P FVK+ VRRG+LP + K +K++ D +K + RQL LK+ AN
Sbjct: 628 RTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLKVETDPFKRKVLDGRQLALKISAN 687
Query: 1251 VTYGYTAANFSGRMPCVEVADSVVAKGRETLERAIKLVRENTTW------NAKVIYGDTD 1304
YG+T A G++PC+E++ SV A GR +E V + T NA VIYGDTD
Sbjct: 688 SVYGFTGAQV-GKLPCLEISGSVTAYGRTMIEMTKNEVESHYTQANGYENNAVVIYGDTD 746
Query: 1305 SMFVLVPGRSRLEAFEIGQQIADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMFESP 1364
S+ V ++ + E+G++ A+ V++ P+ L+ EKVY P +L KKRY G F P
Sbjct: 747 SVMVNFGVKTLERSMELGREAAELVSSKFVHPIKLEFEKVYYPYLLINKKRYAGLYFTRP 806
Query: 1365 DQEKPTYEAKGIETVRRDGCPAGVKLLRQSLCELFTHGDMSVVKRLVKATLSRLAETSLP 1424
D + KGIETVRRD P L+ L +L D VK ++ L +
Sbjct: 807 D-TYDKMDCKGIETVRRDNSPLVANLMNSCLQKLLIERDPDGAVAYVKQVIADLLCNRID 865
Query: 1425 VHELFFTREYHGQAGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTCGAPGVPLV 1484
+ L T+E + Y A E+A ++ +D P+ G RV +++ A P
Sbjct: 866 ISHLVITKEL-AKTDY--AAKQAHVELAAKMKKRDPGTAPKLGDRVPYVICAAAKNTPAY 922
Query: 1485 RLARTP 1490
+ A P
Sbjct: 923 QKAEDP 928
Score = 79.4 bits (187), Expect = 4e-14
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
Query: 17 GTDIKQVPVLRIFGPAKDGYKACLHIHGVFPYFYIPCPTQNPEPQLLYQIAASLDKALNI 76
G I VPV+R+FG +G C H+HG PYFYI P+Q E ++ +LD+ +
Sbjct: 96 GAQIGPVPVVRMFGVTMEGNSVCCHVHGFCPYFYIEAPSQFEEHH-CEKLQKALDQKVIA 154
Query: 77 AMKQATSSNQH-VYKISLVKGLPFYGYH-DKEHLYLKVFLYRPGLIKQAVELFSSGAILG 134
++ + Q V + LV+ L +GY+ DK+ Y+K+ + P + A L I+
Sbjct: 155 DIRNNKDNVQEAVLMVELVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMS 214
Query: 135 ----QTFQPHESHLNFTLQFFIDFNLFGMSDIDLQSVQFR 170
Q + E++++F ++F +D ++ G + I+L +R
Sbjct: 215 EIDFQDCRAFENNIDFDIRFMVDTDVVGCNWIELPMGHWR 254
>AY070529-1|AAL48000.1| 746|Drosophila melanogaster GM13460p protein.
Length = 746
Score = 73.3 bits (172), Expect = 3e-12
Identities = 79/311 (25%), Positives = 133/311 (42%), Gaps = 16/311 (5%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQN-DEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRM 1264
G+LP + VKK M + ++ H RQ+ LKL AN YG S R
Sbjct: 177 GILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLTANSMYGCLGFAHS-RF 235
Query: 1265 PCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQ 1324
+A V KGRE L +LV++ N V+YGDTDS+ + + ++IG
Sbjct: 236 FAQHLAALVTHKGREILTNTQQLVQK---MNYDVVYGDTDSLMINTNITDYDQVYKIGHN 292
Query: 1325 IADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMF--ESPDQEKPTYEAKGIETVRRD 1382
I +V + L ++ V+ +L KK+Y +S + E KG++ VRRD
Sbjct: 293 IKQSVN-KLYKQLELDIDGVFGCLLLLKKKKYAAIKLSKDSKGNLRREQEHKGLDIVRRD 351
Query: 1383 GCPAGVKLLRQSLCELFTHGDMSVVKRLVKATL----SRLAETSLPVHELFFTREY-HGQ 1437
V + + L E+ + + V A L +++AE +P+ T++
Sbjct: 352 WSQLAVMVGKAVLDEVLSEKPLEEKLDAVHAQLEKIKTQIAEGVVPLPLFVITKQLTRTP 411
Query: 1438 AGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTC-GAPGVPLVRLARTPQ-ELTR 1495
Y AS P ++A R+ ++R + G V +++ G + R + + +
Sbjct: 412 QEYANSASLPHVQVALRMN-RERNRRYKKGDMVDYVICLDGTTNAAMQRAYHLDELKTSE 470
Query: 1496 DRSLRPHVAYY 1506
D+ L+ YY
Sbjct: 471 DKKLQLDTNYY 481
Score = 42.3 bits (95), Expect = 0.005
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFST 1152
L+ EP Y V+++DF SLYPS++ YN CF+T
Sbjct: 121 LVLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTT 156
>AE014297-3026|AAF55908.2| 1488|Drosophila melanogaster CG6349-PA
protein.
Length = 1488
Score = 73.3 bits (172), Expect = 3e-12
Identities = 79/311 (25%), Positives = 133/311 (42%), Gaps = 16/311 (5%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQN-DEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRM 1264
G+LP + VKK M + ++ H RQ+ LKL AN YG S R
Sbjct: 919 GILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLTANSMYGCLGFAHS-RF 977
Query: 1265 PCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQ 1324
+A V KGRE L +LV++ N V+YGDTDS+ + + ++IG
Sbjct: 978 FAQHLAALVTHKGREILTNTQQLVQK---MNYDVVYGDTDSLMINTNITDYDQVYKIGHN 1034
Query: 1325 IADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMF--ESPDQEKPTYEAKGIETVRRD 1382
I +V + L ++ V+ +L KK+Y +S + E KG++ VRRD
Sbjct: 1035 IKQSVN-KLYKQLELDIDGVFGCLLLLKKKKYAAIKLSKDSKGNLRREQEHKGLDIVRRD 1093
Query: 1383 GCPAGVKLLRQSLCELFTHGDMSVVKRLVKATL----SRLAETSLPVHELFFTREY-HGQ 1437
V + + L E+ + + V A L +++AE +P+ T++
Sbjct: 1094 WSQLAVMVGKAVLDEVLSEKPLEEKLDAVHAQLEKIKTQIAEGVVPLPLFVITKQLTRTP 1153
Query: 1438 AGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLVTC-GAPGVPLVRLARTPQ-ELTR 1495
Y AS P ++A R+ ++R + G V +++ G + R + + +
Sbjct: 1154 QEYANSASLPHVQVALRMN-RERNRRYKKGDMVDYVICLDGTTNAAMQRAYHLDELKTSE 1212
Query: 1496 DRSLRPHVAYY 1506
D+ L+ YY
Sbjct: 1213 DKKLQLDTNYY 1223
Score = 42.3 bits (95), Expect = 0.005
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFST 1152
L+ EP Y V+++DF SLYPS++ YN CF+T
Sbjct: 863 LVLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTT 898
>S48157-1|AAB24152.1| 1490|Drosophila melanogaster DNA
polymerase-primase 180 kdasubunit protein.
Length = 1490
Score = 72.9 bits (171), Expect = 3e-12
Identities = 73/277 (26%), Positives = 121/277 (43%), Gaps = 14/277 (5%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQN-DEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRM 1264
G+LP + VKK M + ++ H RQ+ LKL AN YG S R
Sbjct: 921 GILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLTANSMYGCLGFAHS-RF 979
Query: 1265 PCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQ 1324
+A V KGRE L +LV++ N V+YGDTDS+ + + ++IG
Sbjct: 980 FAQHLAALVTHKGREILTNTQQLVQK---MNYDVVYGDTDSLMINTNITDYDQVYKIGHN 1036
Query: 1325 IADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMF--ESPDQEKPTYEAKGIETVRRD 1382
I +V L ++ V+ +L KK+Y +S + E KG++ VRRD
Sbjct: 1037 IKQSVNKLYKQE-ELDIDGVFGCLLLLKKKKYAAIKLSKDSKGNLRREQEHKGLDIVRRD 1095
Query: 1383 GCPAGVKLLRQSLCELFTHGDMSVVKRLVKATL----SRLAETSLPVHELFFTREY-HGQ 1437
V + + L E+ + + V A L +++AE +P+ T++
Sbjct: 1096 WSQLAVMVGKAVLDEVLSEKPLEEKLDAVHAQLEKIKTQIAEGVVPLPLFVITKQLTRTP 1155
Query: 1438 AGYRPGASAPPNEIAKRIGMKDRRAIPRTGWRVSWLV 1474
Y AS P ++A R+ ++R + + G V +++
Sbjct: 1156 QEYANSASLPHVQVALRMN-RERNRLYKKGDMVDYVI 1191
Score = 42.3 bits (95), Expect = 0.005
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFST 1152
L+ EP Y V+++DF SLYPS++ YN CF+T
Sbjct: 865 LVLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTT 900
>D90310-1|BAA14340.1| 1505|Drosophila melanogaster DNA polymerase
alpha protein.
Length = 1505
Score = 69.3 bits (162), Expect = 4e-11
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 14/264 (5%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQN-DEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRM 1264
G+LP + VKK M + ++ H RQ+ LKL AN YG S R
Sbjct: 919 GILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLTANSMYGCLGFAHS-RF 977
Query: 1265 PCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQ 1324
+A V KGR+ L +LV++ N V+YGDTDS+ + + ++IG
Sbjct: 978 FAQHLAALVTHKGRD-LTNTQQLVQK---MNYDVVYGDTDSLMINTNITDYDQVYKIGHN 1033
Query: 1325 IADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMF--ESPDQEKPTYEAKGIETVRRD 1382
I +V + L ++ V+ +L KK+Y +S + E KG++ VRRD
Sbjct: 1034 IKQSVN-KLYKQLELDIDGVFGCLLLLKKKKYAAIKLSKDSKGNLRREQEHKGLDIVRRD 1092
Query: 1383 GCPAGVKLLRQSLCELFTHGDMSVVKRLVKATL----SRLAETSLPVHELFFTREY-HGQ 1437
V + + L E+ + + V A L +++AE +P+ T++
Sbjct: 1093 WSQLAVMVGKAVLDEVLSEKPLEEKLDAVHAQLEKIKTQIAEGVVPLPLFVITKQLTRTP 1152
Query: 1438 AGYRPGASAPPNEIAKRIGMKDRR 1461
YR AS P ++A R+ + R
Sbjct: 1153 QDYRNSASLPHVQVALRMNRERNR 1176
Score = 37.9 bits (84), Expect = 0.12
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFS 1151
L+ EP Y V+++D SLYPS++ YN CF+
Sbjct: 863 LVLEPMRGLYEKYVLLMDLNSLYPSIIQEYNICFN 897
>AB011813-1|BAA32745.1| 1415|Drosophila melanogaster DNA polymerase
alpha 180K subunit protein.
Length = 1415
Score = 69.3 bits (162), Expect = 4e-11
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 14/264 (5%)
Query: 1206 GVLPXXXXXXXXXXQAVKKSMKMQN-DEAVKKAMHSRQLGLKLIANVTYGYTAANFSGRM 1264
G+LP + VKK M + ++ H RQ+ LKL AN YG S R
Sbjct: 919 GILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLTANSMYGCLGFAHS-RF 977
Query: 1265 PCVEVADSVVAKGRETLERAIKLVRENTTWNAKVIYGDTDSMFVLVPGRSRLEAFEIGQQ 1324
+A V KGR+ L +LV++ N V+YGDTDS+ + + ++IG
Sbjct: 978 FAQHLAALVTHKGRD-LTNTQQLVQK---MNYDVVYGDTDSLMINTNITDYDQVYKIGHN 1033
Query: 1325 IADAVTADNPPPVALKLEKVYQPCILQTKKRYVGFMF--ESPDQEKPTYEAKGIETVRRD 1382
I +V + L ++ V+ +L KK+Y +S + E KG++ VRRD
Sbjct: 1034 IKQSVN-KLYKQLELDIDGVFGCLLLLKKKKYAAIKLSKDSKGNLRREQEHKGLDIVRRD 1092
Query: 1383 GCPAGVKLLRQSLCELFTHGDMSVVKRLVKATL----SRLAETSLPVHELFFTREY-HGQ 1437
V + + L E+ + + V A L +++AE +P+ T++
Sbjct: 1093 WSQLAVMVGKAVLDEVLSEKPLEEKLDAVHAQLEKIKTQIAEGVVPLPLFVITKQLTRTP 1152
Query: 1438 AGYRPGASAPPNEIAKRIGMKDRR 1461
YR AS P ++A R+ + R
Sbjct: 1153 QDYRNSASLPHVQVALRMNRERNR 1176
Score = 37.9 bits (84), Expect = 0.12
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 1117 LIFEPESRFYSDPVIVLDFQSLYPSMMIAYNYCFS 1151
L+ EP Y V+++D SLYPS++ YN CF+
Sbjct: 863 LVLEPMRGLYEKYVLLMDLNSLYPSIIQEYNICFN 897
>AE014297-1204|AAF54559.2| 2762|Drosophila melanogaster CG14692-PA
protein.
Length = 2762
Score = 36.7 bits (81), Expect = 0.27
Identities = 62/364 (17%), Positives = 130/364 (35%), Gaps = 11/364 (3%)
Query: 300 KAVDVSIHLPSKDLDLTLNRTTKMNLNEHEEEDLDTTIVDENLVLNSSMSLQYSQVLLNS 359
K DV P+ D T K+ +N+ E D + + + L+ +
Sbjct: 777 KVEDVPKTTPNTKDDEVSGSTEKLEMNKEEPLDETVELSNHEITLSKVLKTVSENKQERM 836
Query: 360 EDMELIDMLHDMDQQRVEEDSIMGTPANRDQEVD-MELDDAEYSRIFNDDSVCHDQNESE 418
ED+ D + + EDS M + +D +E I + ++ QN E
Sbjct: 837 EDLPSEDKIVKDSTSSLAEDSKMPEAKKESKSIDELETTKEVLEDIIHSETDLSKQNIKE 896
Query: 419 N---NGSPLSWHDSFWDGANIPQLDGTFDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNN 475
N P S DS + N+ + L + KN +
Sbjct: 897 NVEETDKPQS-DDSPKELENLKDKIKMLTQEEVTPIEPESLETKGLLSTDKNDKNSLFSK 955
Query: 476 PTNTDSNIDTSEIDEINVSRETADGDVCISELVRASKISKTSIENTEIKSEETFIDAVSR 535
+ ++N ++ +D+I + + ++ + + SI +E K E + S
Sbjct: 956 TNSEENNNESQNVDDITEKTDLKNEKHLLASHISVTSSGDISIRESETKHVENREEMAST 1015
Query: 536 ITAKQNIVKLMNKSEIYDLQNKF----VPTAGPSNKPVDCDNTEMGNSSNNELELSPDGN 591
+ + + EI L+ F T+ ++ + ++ ++ S LE + + +
Sbjct: 1016 NLDSDQVENMKLEGEIGQLKTVFEQSEEKTSPTKSESLHAEDRKISGKSKESLEDAGEND 1075
Query: 592 ELGIVSFYDAS-KVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQEDYDKFKDTELKLDVS 650
++ +S K S ++ L E+ + + ++ EK D+ +E + S
Sbjct: 1076 RSTLLENLPSSEKENSTSLDENPLPEKES-TSLDEKPSSGTEKSTSLDEKSSSEKEKSTS 1134
Query: 651 VNEK 654
++EK
Sbjct: 1135 LDEK 1138
>AE014296-2257|AAF49833.1| 1544|Drosophila melanogaster CG17687-PA
protein.
Length = 1544
Score = 36.3 bits (80), Expect = 0.36
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 13/170 (7%)
Query: 277 IDKPVLLEHAYYPAETLGDTQLFKAVDVSIHLPSKDLDLTLNRTTKMNLNE--HEEEDLD 334
++ P + EH P L D L + + + + + LN K N+ HE + L
Sbjct: 843 VEGPSVYEHIMAPVFQLQDKNLVTSNQLFNY--NCKIRFYLNDPLKQEFNKLFHEAQQLK 900
Query: 335 TTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDSIMGTPANRDQEVDM 394
+D V+N+++ L ++M ++ L +MDQ + E ++ + + M
Sbjct: 901 QDTIDS--VMNTNVVLNKIY-----DNMNIMLRLLNMDQFKPPELTVPSLAKDEVIKQIM 953
Query: 395 ELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQLDGTFD 444
E+DD+E I D + G L W FW A I +DG +
Sbjct: 954 EVDDSEVKAINRRKPKTIDTGGKK--GRLLLWSKEFWARALIVMMDGVLE 1001
>AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-PA
protein.
Length = 16223
Score = 34.3 bits (75), Expect = 1.5
Identities = 51/272 (18%), Positives = 103/272 (37%), Gaps = 12/272 (4%)
Query: 272 KLSNKIDKPVLLEHAYYPAETLGDTQLFKAVDVSIHLPSKDLDLTLNRTTKMNLNEHEEE 331
+LSN + + E + + + + Q K PS+ T N + N+ E +
Sbjct: 9378 ELSNSLPQLTTEESSSFQESSAEENQTTKMPWTLSTSPSQSSSKTKNIFSSQNVKEDKTF 9437
Query: 332 DLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQRVEEDSIMGTPANRDQE 391
DT+I ++ L S+V S +DM+ + ++ + D E
Sbjct: 9438 QEDTSISFPQSSTKANSFLTVSRVDEMSSQFSSLDMIEPITSSKLS--------THNDCE 9489
Query: 392 VDMELDDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQLDGTFDNDHXXXX 451
L+ + S N + + +ES S + + +N P T +N +
Sbjct: 9490 CTCLLEQGKDSCTCNCMTDTNSIDESILTASQIVSSEDLQYSSNPPSYKSTQENTNTKGK 9549
Query: 452 XXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEIDEINVSRETADGDVCISELVRAS 511
LQ+ + P + ++R+ P+++ D +I + T D + IS+
Sbjct: 9550 NKNLSTLLQISSTGPYQISKRI--PSSSTLFSDIIKISSTDKDHPTLDEEENISKSPLQL 9607
Query: 512 KISKTSIENTEIK--SEETFIDAVSRITAKQN 541
+ +S+ +I S F+ +S I +Q+
Sbjct: 9608 STTSSSLPKIQITGISHLPFLSTISNIKFEQS 9639
>BT016065-1|AAV36950.1| 792|Drosophila melanogaster LP11827p
protein.
Length = 792
Score = 33.5 bits (73), Expect = 2.5
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 12/167 (7%)
Query: 550 EIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNNELELSPDGNELGIVSFYDASKVFDDSF 609
EI L N V S + +G+SS ++ + N L +++ KV + +
Sbjct: 2 EIAPLINNAVAVVTASASAAVSASASVGSSSKDD-----NVNNLALLASLTLQKVLNINN 56
Query: 610 NQTFLQEQTNCDDCSDIIANEYEKQEDYDKFKDTELKLDVSV-NEKLDTGIKIFTPTVKP 668
N + N D S+ +E +KQ+ + ++ ++K + V N+ L TG +FT T
Sbjct: 57 NNNQHSKNNNHSDNSNSKQHEQQKQQQQPQRRNLDIKSEYDVLNQLLKTG-AVFTATPTA 115
Query: 669 PTKNEMETKYKIPKTKQVQPFFSD-YKDVGDKVEIGQLVLKLHSNLS 714
P E + + +Q +P+ ++ K + + HS+ S
Sbjct: 116 PIAIERRKQTQ----QQQRPYAQQAHQQQQQKQRLNSSISSTHSSTS 158
>AE014296-2577|AAF49579.4| 791|Drosophila melanogaster CG6169-PA,
isoform A protein.
Length = 791
Score = 33.5 bits (73), Expect = 2.5
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 12/167 (7%)
Query: 550 EIYDLQNKFVPTAGPSNKPVDCDNTEMGNSSNNELELSPDGNELGIVSFYDASKVFDDSF 609
EI L N V S + +G+SS ++ + N L +++ KV + +
Sbjct: 2 EIAPLINNAVAVVTASASAAVSASASVGSSSKDD-----NVNNLALLASLTLQKVLNINN 56
Query: 610 NQTFLQEQTNCDDCSDIIANEYEKQEDYDKFKDTELKLDVSV-NEKLDTGIKIFTPTVKP 668
N + N D S+ +E +KQ+ + ++ ++K + V N+ L TG +FT T
Sbjct: 57 NNNQHSKNNNHSDNSNSKQHEQQKQQQQPQRRNLDIKSEYDVLNQLLKTG-AVFTATPTA 115
Query: 669 PTKNEMETKYKIPKTKQVQPFFSD-YKDVGDKVEIGQLVLKLHSNLS 714
P E + + +Q +P+ ++ K + + HS+ S
Sbjct: 116 PIAIERRKQTQ----QQQRPYAQQAHQQQQQKQRLNSSISSTHSSTS 158
>AE014296-2343|AAF49771.3| 2294|Drosophila melanogaster CG32133-PA
protein.
Length = 2294
Score = 33.5 bits (73), Expect = 2.5
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 758 GNSRYVIQPVVRPPTSEQVKKWINEQKALQLLSQFSSEQAISK 800
G R + Q + RPPT+ Q ++ + +Q+ Q++ QF +Q + +
Sbjct: 1004 GQVRIIQQTIQRPPTNVQQQQQVPQQQQQQIIGQFPQQQQLQQ 1046
>BT001860-1|AAN71623.1| 236|Drosophila melanogaster RH66388p
protein.
Length = 236
Score = 33.1 bits (72), Expect = 3.4
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 610 NQTFLQEQTNCDDCSDIIANEYE-----KQEDYDKFKDTELKLDVSVNEKLDTGIKIFTP 664
N + Q + +D DI+ +E + + E+ D KD E + D N+KL T K T
Sbjct: 46 NAKYYAIQQDEEDGDDILEHEEDLADASEDEEGDDIKDGEEEEDEKENKKLHT--KKVTA 103
Query: 665 TVKPPTKNEMETKYKIPKTKQVQPFFSDYKDVGDKVE 701
+ P K + E K+K+ K ++ D ++ D+ E
Sbjct: 104 NITP-AKPKTEVKHKLAKEQESIDELQDLEEPEDEAE 139
>AY094826-1|AAM11179.1| 1266|Drosophila melanogaster LD39940p
protein.
Length = 1266
Score = 33.1 bits (72), Expect = 3.4
Identities = 35/176 (19%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 470 NERVNNPTNTDSNIDTSEIDEINVSRETA----DGDVCISELVRASKISKTSIENTEIKS 525
N NN N + TS + ++V+ T+ + VC+ S +S N+ S
Sbjct: 591 NNNNNNNNNNGNTNGTSNGNRVSVASPTSIVNNNNGVCVVNCSYTPS-SSSSNNNSSSSS 649
Query: 526 EETFIDAVSRITAKQNIVKLMNK-----SEIYD--LQNKFVPTAGPSNKPVDCDNTEMGN 578
+ + + N V +NK ++++ +QN+ S D + +
Sbjct: 650 SSCISNTTNSNISNNNSVVEINKCVPAAAKVFSASVQNQNRLNNNSSCPKGDQQHVAAAS 709
Query: 579 SSNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQ 634
+++N + PD N + I+S +S ++++ +TF + DD S ++ ++Q
Sbjct: 710 TASNNNHVQPD-NSVNIISVNASSSSYNNNHPRTFTSTECQTDDLSASTSSNMQQQ 764
>AE013599-2106|AAF58108.2| 1263|Drosophila melanogaster CG30089-PA
protein.
Length = 1263
Score = 33.1 bits (72), Expect = 3.4
Identities = 35/176 (19%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 470 NERVNNPTNTDSNIDTSEIDEINVSRETA----DGDVCISELVRASKISKTSIENTEIKS 525
N NN N + TS + ++V+ T+ + VC+ S +S N+ S
Sbjct: 591 NNNNNNNNNNGNTNGTSNGNRVSVASPTSIVNNNNGVCVVNCSYTPS-SSSSNNNSSSSS 649
Query: 526 EETFIDAVSRITAKQNIVKLMNK-----SEIYD--LQNKFVPTAGPSNKPVDCDNTEMGN 578
+ + + N V +NK ++++ +QN+ S D + +
Sbjct: 650 SSCISNTTNSNISNNNSVVEINKCVPAAAKVFSASVQNQNRLNNNSSCPKGDQQHVAAAS 709
Query: 579 SSNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIANEYEKQ 634
+++N + PD N + I+S +S ++++ +TF + DD S ++ ++Q
Sbjct: 710 TASNNNHVQPD-NSVNIISVNASSSSYNNNHPRTFTSTECQTDDLSASTSSNMQQQ 764
>AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-PA,
isoform A protein.
Length = 3257
Score = 33.1 bits (72), Expect = 3.4
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 7/154 (4%)
Query: 388 RDQEVDMEL-----DDAEYSRIFNDDSVCHDQNESENNGSPLSWHDSFWDGANIPQLDGT 442
+DQ+ D++ D R +DS D+ EN+ + DS ANI + +
Sbjct: 1265 KDQDKDLDALSKGGDSNPTIRDTGEDSRQTDKKHQEND-TKHEEEDSSKLKANIDETKSS 1323
Query: 443 FDNDHXXXXXXXXXXXLQLGLSRPKKKNERVNNPTNTDSNIDTSEID-EINVSRETADGD 501
+ D + LS+PK +N+R N + +I S+I+ V+ ET
Sbjct: 1324 SEKDAEPISKDSSQDSAKPRLSKPKSRNKRKKNEKKPNDSIAESDIEGGFQVNTETVQAT 1383
Query: 502 VCISELVRASKISKTSIENTEIKSEETFIDAVSR 535
+ K+ N E ET I + +
Sbjct: 1384 CSTPSESNKKDMVKSDETNEEPNLSETEIGRIRK 1417
Score = 33.1 bits (72), Expect = 3.4
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 10/147 (6%)
Query: 491 INVSRETADGDVCISELVRASKISKTSIENTEIKSEETFIDAVSRITAKQNIVKLMNKSE 550
+++ D D +E V S +E+ EI +EE F D +A+ KL K +
Sbjct: 1667 VSLGEVNPDSDPVAAESVAVLHESDRDLESNEIPNEEVFED-TEEASAEDTDNKLKKKED 1725
Query: 551 IYDLQNKFVPTAGPSNKPVDCDNTE--MGNSSNNELELSPDGNELGIVSFYDASKVFDDS 608
++L+ + A S P+ D+T+ N S + L +EL S +A++ D
Sbjct: 1726 DHELEVNDICAA--SKNPITDDSTKDASSNKSTDSDVLQETKDELS-NSLINATQGEDTP 1782
Query: 609 FNQTFLQEQTNCDDCSDIIANEYEKQE 635
+ +E N + + +E +KQE
Sbjct: 1783 IKELTEEEVPN----NKTVEDESKKQE 1805
>AE013599-615|AAF59115.1| 236|Drosophila melanogaster CG14756-PA
protein.
Length = 236
Score = 33.1 bits (72), Expect = 3.4
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 610 NQTFLQEQTNCDDCSDIIANEYE-----KQEDYDKFKDTELKLDVSVNEKLDTGIKIFTP 664
N + Q + +D DI+ +E + + E+ D KD E + D N+KL T K T
Sbjct: 46 NAKYYAIQQDEEDGDDILEHEEDLADASEDEEGDDIKDGEEEEDEKENKKLHT--KKVTA 103
Query: 665 TVKPPTKNEMETKYKIPKTKQVQPFFSDYKDVGDKVE 701
+ P K + E K+K+ K ++ D ++ D+ E
Sbjct: 104 NITP-AKPKTEVKHKLAKEQESIDELQDLEEPEDEAE 139
>AE013599-399|AAM68891.2| 409|Drosophila melanogaster CG11112-PB,
isoform B protein.
Length = 409
Score = 33.1 bits (72), Expect = 3.4
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Query: 633 KQEDYDKFKDTELKLDVSVNEKLDTGIKIFTPTVKPPTKNEMETKYKIPKTKQVQPFFSD 692
K+++ +F +T +KL S EK K + T N + ++P V D
Sbjct: 38 KEDEKRQFLNTLVKLCKSETEKGFVNPKQTISNINTITNNISMPEIQLPPITVV--IVKD 95
Query: 693 YKDVG---DKVEIGQLVLKLHSNLSRDQKPFEKVLETESIENWRQLLFLQKYATQDDYK 748
K++ +K + G +++K SN D KP + E + LL Q TQD K
Sbjct: 96 EKELAKYQEKSKNGAIIIKRRSNAKEDTKPAPRTGLQERTKKGLSLLRAQPSWTQDHLK 154
>AE014298-3064|AAF50873.1| 1223|Drosophila melanogaster CG12092-PA
protein.
Length = 1223
Score = 32.7 bits (71), Expect = 4.4
Identities = 20/88 (22%), Positives = 42/88 (47%)
Query: 569 VDCDNTEMGNSSNNELELSPDGNELGIVSFYDASKVFDDSFNQTFLQEQTNCDDCSDIIA 628
+ D E+ ++ + D + FY +++F + NQT+ +T+ + A
Sbjct: 317 ITTDPVELWAGEESQTRIEKDYFDQHFGPFYRTNQMFVKAVNQTYFTHETSNGVLNFGPA 376
Query: 629 NEYEKQEDYDKFKDTELKLDVSVNEKLD 656
EY ++ + +D+ +KL ++ NE LD
Sbjct: 377 FEYNFLKEVFELQDSIMKLGMADNEGLD 404
>BT022798-1|AAY55214.1| 562|Drosophila melanogaster IP13650p
protein.
Length = 562
Score = 32.3 bits (70), Expect = 5.9
Identities = 19/87 (21%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 329 EEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQ---RVEEDSIMGTP 385
++ + D + +E + N ++Q+ + + + D+D+Q R+EE++ GT
Sbjct: 376 QKAEEDRRLAEEQRLQNHQTNVQFKRQQREEHIQRIRKLRQDLDEQVKKRIEEETRPGTN 435
Query: 386 ANRDQEVDMELDDA---EYSRIFNDDS 409
NR+ +++ +DA +Y+R D++
Sbjct: 436 YNREAQLEELREDAFFFDYARQLMDEA 462
>BT022774-1|AAY55190.1| 420|Drosophila melanogaster IP13950p
protein.
Length = 420
Score = 32.3 bits (70), Expect = 5.9
Identities = 19/87 (21%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 329 EEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQ---RVEEDSIMGTP 385
++ + D + +E + N ++Q+ + + + D+D+Q R+EE++ GT
Sbjct: 234 QKAEEDRRLAEEQRLQNHQTNVQFKRQQREEHIQRIRKLRQDLDEQVKKRIEEETRPGTN 293
Query: 386 ANRDQEVDMELDDA---EYSRIFNDDS 409
NR+ +++ +DA +Y+R D++
Sbjct: 294 YNREAQLEELREDAFFFDYARQLMDEA 320
>BT022766-1|AAY55182.1| 560|Drosophila melanogaster IP13850p
protein.
Length = 560
Score = 32.3 bits (70), Expect = 5.9
Identities = 19/87 (21%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 329 EEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQ---RVEEDSIMGTP 385
++ + D + +E + N ++Q+ + + + D+D+Q R+EE++ GT
Sbjct: 374 QKAEEDRRLAEEQRLQNHQTNVQFKRQQREEHIQRIRKLRQDLDEQVKKRIEEETRPGTN 433
Query: 386 ANRDQEVDMELDDA---EYSRIFNDDS 409
NR+ +++ +DA +Y+R D++
Sbjct: 434 YNREAQLEELREDAFFFDYARQLMDEA 460
>AE014296-2087|AAF49969.1| 564|Drosophila melanogaster CG6793-PA
protein.
Length = 564
Score = 32.3 bits (70), Expect = 5.9
Identities = 19/87 (21%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 329 EEEDLDTTIVDENLVLNSSMSLQYSQVLLNSEDMELIDMLHDMDQQ---RVEEDSIMGTP 385
++ + D + +E + N ++Q+ + + + D+D+Q R+EE++ GT
Sbjct: 378 QKAEEDRRLAEEQRLQNHQTNVQFKRQQREEHIQRIRKLRQDLDEQVKKRIEEETRPGTN 437
Query: 386 ANRDQEVDMELDDA---EYSRIFNDDS 409
NR+ +++ +DA +Y+R D++
Sbjct: 438 YNREAQLEELREDAFFFDYARQLMDEA 464
>AY118675-1|AAM50535.1| 1073|Drosophila melanogaster AT05180p
protein.
Length = 1073
Score = 31.9 bits (69), Expect = 7.8
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 560 PTAGPSNKPVDCDNTEMGNSSNNELEL----SPDGNELGIVSFYDASKVFDDSFNQTFLQ 615
PT PSN V NT G ++NN L S D +V AS + DS N T +
Sbjct: 797 PTRKPSNGAVLPTNTA-GTAANNRHSLISCRSDDKCYCSMVEEEPASSMERDSANNTHTE 855
Query: 616 EQTNCDDCSDIIANE 630
T+CD S + A++
Sbjct: 856 TTTSCDSDSCVSASK 870
>AE014297-1565|AAF54847.1| 1059|Drosophila melanogaster CG14395-PA
protein.
Length = 1059
Score = 31.9 bits (69), Expect = 7.8
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 560 PTAGPSNKPVDCDNTEMGNSSNNELEL----SPDGNELGIVSFYDASKVFDDSFNQTFLQ 615
PT PSN V NT G ++NN L S D +V AS + DS N T +
Sbjct: 783 PTRKPSNGAVLPTNTA-GTAANNRHSLISCRSDDKCYCSMVEEEPASSMERDSANNTHTE 841
Query: 616 EQTNCDDCSDIIANE 630
T+CD S + A++
Sbjct: 842 TTTSCDSDSCVSASK 856
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.317 0.133 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,611,067
Number of Sequences: 52641
Number of extensions: 3403312
Number of successful extensions: 9257
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 9129
Number of HSP's gapped (non-prelim): 79
length of query: 1644
length of database: 24,830,863
effective HSP length: 95
effective length of query: 1549
effective length of database: 19,829,968
effective search space: 30716620432
effective search space used: 30716620432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 69 (31.9 bits)
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