Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002414-TA|BGIBMGA002414-PA|IPR013026|Tetratricopeptide
region, IPR001440|Tetratricopeptide TPR_1
(243 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 6e-15
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 52 3e-07
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17) 39 0.003
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 38 0.006
SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10) 38 0.006
SB_34109| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 38 0.010
SB_25419| Best HMM Match : PH (HMM E-Value=2.8e-16) 38 0.010
SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 36 0.030
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 36 0.040
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.070
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 34 0.093
SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15) 33 0.16
SB_42049| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_1789| Best HMM Match : RICH (HMM E-Value=1.6) 33 0.16
SB_58067| Best HMM Match : TPR_2 (HMM E-Value=0) 33 0.16
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 33 0.21
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 33 0.21
SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 32 0.38
SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10) 32 0.50
SB_50433| Best HMM Match : MFAP1_C (HMM E-Value=0.24) 32 0.50
SB_16585| Best HMM Match : MFAP1_C (HMM E-Value=0.24) 32 0.50
SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019) 31 0.66
SB_46110| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 31 0.66
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_51502| Best HMM Match : TPR_2 (HMM E-Value=0) 31 1.1
SB_48189| Best HMM Match : K-box (HMM E-Value=0.34) 31 1.1
SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37) 30 1.5
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 30 1.5
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 30 1.5
SB_48459| Best HMM Match : B12-binding_2 (HMM E-Value=3.3) 30 1.5
SB_22759| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 30 2.0
SB_34103| Best HMM Match : TPR_1 (HMM E-Value=5.6e-23) 30 2.0
SB_31762| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 2.6
SB_32849| Best HMM Match : Toxin_10 (HMM E-Value=4.2) 29 2.6
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_24447| Best HMM Match : TolA (HMM E-Value=1.3) 29 2.6
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 29 3.5
SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11) 29 3.5
SB_16158| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_51523| Best HMM Match : TPR_2 (HMM E-Value=0.00012) 29 4.6
SB_16367| Best HMM Match : TPR_1 (HMM E-Value=0) 29 4.6
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 29 4.6
SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_26739| Best HMM Match : TPR_2 (HMM E-Value=1e-34) 29 4.6
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_25367| Best HMM Match : TPR_1 (HMM E-Value=2.4e-40) 28 6.1
SB_22030| Best HMM Match : MutS_V (HMM E-Value=1e-15) 28 6.1
SB_9721| Best HMM Match : Filament (HMM E-Value=0.2) 28 6.1
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 28 6.1
SB_38303| Best HMM Match : Fz (HMM E-Value=9.8e-07) 28 6.1
SB_28454| Best HMM Match : SDA1 (HMM E-Value=1.7) 28 6.1
SB_19968| Best HMM Match : TPR_2 (HMM E-Value=1.1e-39) 28 6.1
SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_58247| Best HMM Match : TPR_1 (HMM E-Value=1.2e-19) 28 8.1
SB_59055| Best HMM Match : Ribosomal_L30_N (HMM E-Value=0.55) 28 8.1
SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057) 28 8.1
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 28 8.1
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 78.2 bits (184), Expect = 6e-15
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 17 KMELNEEWNNFMKRIGDVSNLVRDMASGDKEKADAAQVLADKYLQ-------GKVILDEE 69
K E +++ +F+ ++ ++ ++++ + S ++EK A AD+YL +I D+E
Sbjct: 4 KTEGDDDIKSFLSKVDEIESIMKGLTSSEEEKQTVALKKADEYLSVHGDKADASIIHDKE 63
Query: 70 --VTMNIKDDRTVINKKT--RKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKADTF 125
+T I D T INK +K D+ + E +M VS DA+ RA +RK R A
Sbjct: 64 TGITTKIGFDGTQINKSCGPKKASDNVGAVSAEDFMKAVSYDAKARASERKQREAVALQL 123
Query: 126 KTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRA 163
K + AF++ +YE A+ Y +A+ Q + N FY +RA
Sbjct: 124 KEKGNLAFKQQKYEEAVKLYTQALNQDRTNTAFYTNRA 161
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Query: 104 VSKDAERRALDRKIRREKA-DTFKTQAVKAFRRGEYERALSCYDRAIE----QIKDNPMF 158
+ KD + + +R+ K+ K + AF G Y++A Y A+E N
Sbjct: 14 MKKDPDHKKARMILRKAKSLQAKKQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKL 73
Query: 159 YCDRALTNIKLGHFEKVVGDCDSALRLNEDSYKARLYLTKAYKELDEHDKYETSFNDLEN 218
Y +RA+ KLG ++ + DC A+ L+ KA L Y E +KYE + D E+
Sbjct: 74 YYNRAVVGSKLGKNDQAIEDCTQAMNLDHTYTKAYLKRANCYM---ESEKYEEAVRDYES 130
Query: 219 KFPQHRDLTEY 229
+ R E+
Sbjct: 131 LCKKDRSSREF 141
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Query: 104 VSKDAERRALDRKIRREKA-DTFKTQAVKAFRRGEYERALSCYDRAIE----QIKDNPMF 158
+ KD + + +R+ K+ K + AF G Y++A Y A+E N
Sbjct: 14 MKKDPDHKKARMILRKAKSLQAKKQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKL 73
Query: 159 YCDRALTNIKLGHFEKVVGDCDSALRLNEDSYKARLYLTKAYKELDEHDKYETSFNDLEN 218
Y +RA+ KLG ++ + DC A+ L+ KA L Y E +KYE + D E+
Sbjct: 74 YYNRAVVGSKLGKNDQAIEDCTQAMNLDHTYTKAYLKRANCYM---ESEKYEEAVRDYES 130
Query: 219 KFPQHRDLTEY 229
+ R E+
Sbjct: 131 LCKKDRSSREF 141
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 119 REKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGD 178
++KA+ F+ + A +R E++ AL Y + IE K + + +RAL ++KL ++ + D
Sbjct: 861 QKKANDFREKGNDAVKREEFQEALDWYTKGIELTKTDHRLFSNRALCHLKLNKPKEALAD 920
Query: 179 CDSALRLNEDSYKA 192
C+S L+L E KA
Sbjct: 921 CESCLKLEEHFGKA 934
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 120 EKADTFKTQAVKAFRRGEYERALSCYDRAIEQI-----KDNPMFYCDRALTNIKLGHFEK 174
E+A K + K F+ +YE+A+ CY AIE +D FY +RA ++ FE
Sbjct: 139 EQAQVAKLKGNKYFKGCKYEQAIKCYTEAIELCPPENKQDLSTFYQNRAAAYEQMNQFEN 198
Query: 175 VVGDCDSALRLNEDSYKARLYLTKAYKELD 204
VV + AL LN KA + +A ++L+
Sbjct: 199 VVEEATKALELNSKYTKALMRRARALEKLE 228
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 120 EKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDC 179
++A+ K +A F+ G Y A++ Y +AIE D P +Y +R+ +K ++ + D
Sbjct: 185 KEAEDLKLKANGYFKEGNYNSAITFYTQAIELKADVPAYYGNRSFCYLKTEYYGLALADA 244
Query: 180 DSALRLNEDSYKARLYLTKAYKELDEHDKYETSFNDLE 217
+ A++L+ K Y +A + K++ S D E
Sbjct: 245 NKAIQLDRKYIKG--YYRRATANM-ALGKFKLSLKDYE 279
>SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17)
Length = 455
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 13/113 (11%)
Query: 120 EKADTFKTQAVKAFRRGEYERALSCYDRAI----------EQIKDNPMFYCDRALTNIKL 169
+ A K + K F+ G+YE ALS Y A+ E+ K+ + Y +RA +KL
Sbjct: 7 KSAVEIKEEGNKYFKAGDYEAALSSYAAALKLYSGNEKDKEKQKEKAVIYKNRAACQLKL 66
Query: 170 GHFEKVVGDCDSALRLNEDSYKARLYLTKAYK---ELDEHDKYETSFNDLENK 219
+E + D AL + + KA ++A++ L+E K + + LE K
Sbjct: 67 EKYEAAIKDATKALDIVPNDPKALFRRSQAFEATGRLEEAFKDARTLSHLEPK 119
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/80 (22%), Positives = 37/80 (46%)
Query: 114 DRKIRREKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFE 173
D++ ++EKA +K +A + +YE A+ +A++ + ++P R+ G E
Sbjct: 45 DKEKQKEKAVIYKNRAACQLKLEKYEAAIKDATKALDIVPNDPKALFRRSQAFEATGRLE 104
Query: 174 KVVGDCDSALRLNEDSYKAR 193
+ D + L S + R
Sbjct: 105 EAFKDARTLSHLEPKSERVR 124
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 38.3 bits (85), Expect = 0.006
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 35 SNLVRDMASGDKEKADAAQVLADKYLQGKVILDEEVTMNIKDDRTVINKKTRKTCDDSSE 94
S L+R AS + EK D + L + + +E ++ ++ + ++ K+ K +
Sbjct: 204 SELLRQKASLENEKEDLERSLKELLEKSPKEKEEMLSEELETQKELLIKEKHKV---EEK 260
Query: 95 IDKETWMAEVSKDAERRALDRKIRREKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKD 154
+ E KD E L+ K+ +KAD K A K ++ E ++ LS + A E++KD
Sbjct: 261 LQNELNQKLELKDKE---LEEKLLAQKADLEKVIAEKEAQQKELQQELSIHKSATEKLKD 317
>SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10)
Length = 452
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 125 FKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDSALR 184
++++ K EY A+ Y+++I N +C RA I L +E+ + D + ++
Sbjct: 287 YRSEGNKKMISKEYRTAIDLYNKSILASPINYFSWCQRATAFISLNKYEESLLDFEECIK 346
Query: 185 LNEDSYKARLYLTKAYKELDEHDKYETSFNDLENKFPQHRDLTEYFL 231
LN K L+ + L ++ + N + P +D+ + L
Sbjct: 347 LNPKWVKGYLFRGLSQLHLRQYKDALVTLNYAGSMCPDDKDVAQKLL 393
>SB_34109| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 503
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 118 RREKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVG 177
+ E ++ + A + +G Y++AL+CY++A++ D+P +RA ++G +K +
Sbjct: 36 KSEDSEDWLKLASMSLEQGNYKQALACYNQALKHNPDDPTILWERAAVCYQMGDVKKALE 95
Query: 178 DCDSALRL--NEDSYK 191
AL+ N+D K
Sbjct: 96 YYQVALKAFPNDDLEK 111
>SB_25419| Best HMM Match : PH (HMM E-Value=2.8e-16)
Length = 453
Score = 37.5 bits (83), Expect = 0.010
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 42 ASGDKEKADAAQVLADKYLQGKVILD-EEVTMNIKDDRTVINKKTRK-----TCDDS-SE 94
+S +KE + +K GKV+ + E K+ ++ K+ K T +D E
Sbjct: 199 SSKNKESGKVNETSENKEQSGKVMEELEHERQKRKELEKLLEKEREKKQNGDTPEDKVQE 258
Query: 95 IDKETWMAEVSKDAERRALDRKIRREKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKD 154
++K W+ + RAL K ++++ D + K+ ++ +RA+ +DR +Q+K
Sbjct: 259 LEKALWLERTRRQEMERALHEKQKQDELDRLAAEE-KSRKKAMTDRAI--HDRLPQQVKS 315
Query: 155 NPMFYCDRALTNIKLGH 171
P + A + +GH
Sbjct: 316 PPKDDMNLAQHIVSVGH 332
>SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 868
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 126 KTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDSALRL 185
K Q F G+Y+ A+S Y AI N + Y +RA + +K + + D A+ L
Sbjct: 504 KLQGNDHFNHGKYKAAISAYTLAISGAPYNHILYGNRAQSYLKSEDLREGLTDGRRAVVL 563
Query: 186 NEDSYKARLYLTKAYKELDEHDK 208
D K + +A+ EL +++
Sbjct: 564 KPDWTKGQFRYAQAFFELGYYER 586
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 35.5 bits (78), Expect = 0.040
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 124 TFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDSAL 183
T+ + F++ EY++AL Y A+E +P R+ +KLG + D ++AL
Sbjct: 18 TYLAEGDVLFKQEEYQKALDSYSLALELKPTDPFCLVARSKCYLKLGKNDAAYRDAEAAL 77
Query: 184 RLNEDSYK 191
++D K
Sbjct: 78 EEDKDFNK 85
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 34.7 bits (76), Expect = 0.070
Identities = 19/96 (19%), Positives = 44/96 (45%)
Query: 120 EKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDC 179
+KA K A+++ +++ A ++ A E DN FY + A + G++E+ + +C
Sbjct: 228 KKAMEEKELGNAAYKKKDFDTAHKHFNNAKELNPDNMTFYTNNAAAFFEEGNYEECIKEC 287
Query: 180 DSALRLNEDSYKARLYLTKAYKELDEHDKYETSFND 215
A+ + + + KA+ + + ++ D
Sbjct: 288 LEAVEVGRSNRAEFALIGKAFARIGNSYAKQNNYKD 323
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 34.3 bits (75), Expect = 0.093
Identities = 40/212 (18%), Positives = 89/212 (41%), Gaps = 13/212 (6%)
Query: 43 SGDKEKADAAQVLADKYLQGKVILDEEVTMNIKDDRTVIN----KKTRKTCDDSSEIDK- 97
S +K+ + +Y++G++ + IKD+ + ++ ++ D + I++
Sbjct: 1340 SAEKDNLTDNLQASKEYIEGQLESLKAQMSKIKDENENLKESDARRQQEILDLENRINEL 1399
Query: 98 ETWMAEVSKDAERRALDRKIRREKADTFKTQAVKAFR-RGEYERALSCYDRAIEQIKDNP 156
E +A +S + +R D + K T + Q + R + + R + ++D
Sbjct: 1400 ENMLARISAERDRALEDLRTSTAKISTLEQQIRDLTKDRNSLDEKIEELRRQVNTLRDEK 1459
Query: 157 MFYCDRALTNIK--LGHFEKVVGDCDSA---LRLNEDSYKARLYLTKAYKELDEHDKYET 211
+R L +K + ++ + + D L+L D + ++ K E D YET
Sbjct: 1460 NIV-ERDLNELKSKIDYYNQEIESRDKTIEDLKLKRDELERQMDALKKDMRRVEAD-YET 1517
Query: 212 SFNDLENKFPQHRDLTEYFLNKRENFEEDDDN 243
+ +EN +R + E L ++ + D +N
Sbjct: 1518 AIQKIENMEKANRSVNEKILIIEKSNDRDREN 1549
>SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15)
Length = 458
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 136 GEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDSALRLNED 188
G Y+ A+ + +AI+ + F+ +R+ +LG FEK + D D A+ L D
Sbjct: 283 GNYQAAIELFTQAIKLDARDFRFFGNRSYCFDRLGQFEKALQDADVAISLAPD 335
>SB_42049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 119 REKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDR 162
R+KA+ K + + + +++ A++ Y RAIE N ++ C+R
Sbjct: 88 RQKAEELKNEGNQLMKEEKFQEAINSYSRAIELDNTNSVYPCNR 131
>SB_1789| Best HMM Match : RICH (HMM E-Value=1.6)
Length = 254
Score = 33.5 bits (73), Expect = 0.16
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 65 ILDEEVTMNIKDDRTVIN-KKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKAD 123
++D++ T+ + + V K K D ++ +E E+ K E K+RREK
Sbjct: 128 LIDDKKTLGERCEELVKKLKDIDKKYSDKIKLMEENHQVEIKKQKEVILAAEKLRREKWI 187
Query: 124 TFKTQAVKA---FRRGEYERALSCYDRAIEQI 152
T KTQ +K RR ++ SC + I+ +
Sbjct: 188 TEKTQQIKLSIWVRRHVTDKPCSCKLQLIQSV 219
>SB_58067| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 593
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 119 REKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGD 178
REKAD F + K RG Y+ A+ + A + +A N +G +G+
Sbjct: 287 REKADAFIDEGCKNMDRGNYQEAIESFQMAGVLYDNTNYSETGQAKANYNIGLIHARLGN 346
Query: 179 CDSALRLNEDSYKARLYL 196
+ A+ DSY A L L
Sbjct: 347 HEEAM----DSYNAALKL 360
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 33.1 bits (72), Expect = 0.21
Identities = 30/151 (19%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 5 KILSNPALKDHNKMELNEEWNNFMKRIGDVSNLVRDMASGDKEKADAAQVLADKYLQGKV 64
++LS K+H LN EWN +++ +N+ + A + + +Q + K + +
Sbjct: 149 ELLSTLERKNHEIQNLNVEWNTMSEKL-SAANIAKCKAEAALDDIE-SQGTSFKIREKR- 205
Query: 65 ILDEEVTMNIKDDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKADT 124
+D+E + K + ++ + KT ++ + I KE +++K E + + AD
Sbjct: 206 -MDQEKVLLQKQNESLSAELKAKT-EELATIRKEKSRDQLAKSEEHFKNELASQSRLADL 263
Query: 125 FKTQAVKAFRRG-EYERALSCYDRAIEQIKD 154
+K ++ ++ +R E + A+ + +++ D
Sbjct: 264 YKDESEESKKRAKEMQTAMDELQKLLKEAVD 294
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 66 LDEEVTMNIKDDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKADTF 125
L+EE+ + ++ + ++ R+ +++ E+ + W +V E+ L+ + REK +
Sbjct: 1796 LEEEMNNRLAREKKPLEEEVRELQEENEELKNQRWEMKVHFRREKVKLEEEFEREK-ENL 1854
Query: 126 KTQAVKAFRRGEYERALSCYDRAIEQIK 153
+TQ R E+ R L DRA ++ K
Sbjct: 1855 ETQF--DAEREEFRRRLE--DRAQQKAK 1878
>SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 32.7 bits (71), Expect = 0.28
Identities = 27/125 (21%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 120 EKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDC 179
++A ++ Q V+ G++ AL C+++AI+ Y +RA + G +
Sbjct: 44 KRAKEYEIQGVEKAEAGDFVGALDCFNKAIDVAPLRASGYNNRAQLSRLRGRVTENDQLA 103
Query: 180 DSALRLNEDS-YKARLYLT-KAYKELDEHDKYETSFNDLENKFPQHRDLTEYFLNKRENF 237
D A R+ + Y L +T K + +E ++ E + E + + + E + E
Sbjct: 104 DLATRVEKRKLYYCNLTITIKRRRREEEEEEVEEEEEEEEEEEEEEEEEEEEEEEEEEEE 163
Query: 238 EEDDD 242
EE+++
Sbjct: 164 EEEEE 168
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 32.3 bits (70), Expect = 0.38
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 67 DEEVTMNIKDDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKADTFK 126
DEEV + + ++ + +K K ++ E T + +K + ++K +
Sbjct: 167 DEEVKLLEEKEKQQVKEKKEKARINTREAKLPTNVKTPAKTDQELTFLANREKDKGND-- 224
Query: 127 TQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALT--NIKLGHF---EKVVGDCDS 181
AFR G+Y+ +L Y R+IE +K Y +RA+ N+K KV + S
Sbjct: 225 -----AFRSGDYKESLVYYTRSIE-LKPTAASYNNRAMAVRNVKTSDIFSQGKVAKEAQS 278
Query: 182 ALRLNEDSYK----ARLYLTKAYKELDEHDKYETS 212
N S K RL + + +E D+ ++ E +
Sbjct: 279 KSESNPTSRKQGGGQRLKIVEVDEEEDDEEETEAA 313
>SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 13 KDHNKMELNEEWNNFMKRIGDVSNLVRDMASGDKEKADAAQVLADKYLQGKVILDEEVTM 72
++ +K E+++E + M + +M DKE+ D DK + +D++
Sbjct: 147 QEMDKEEMDQEMDKEMDKEDKEEMDQEEMDKQDKEEMDQEMDKQDKEEMDQEEMDKQDKE 206
Query: 73 NIKDDRTVINKKTRKTCDDSSEIDKE 98
N K+D+ ++K+ ++ +D ++DKE
Sbjct: 207 N-KEDKEEMDKQDKENKEDREKMDKE 231
>SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10)
Length = 559
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/73 (24%), Positives = 34/73 (46%)
Query: 136 GEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDSALRLNEDSYKARLY 195
G E A+ + AI + + + RA I++ + DCD A ++N DS + +
Sbjct: 62 GNLEEAIKLFTDAIMKNPHSAPLFAKRASCFIRMKKPNAAIRDCDKAAQINPDSAQIYKW 121
Query: 196 LTKAYKELDEHDK 208
+A++ L +K
Sbjct: 122 RGRAHEFLGHWEK 134
>SB_50433| Best HMM Match : MFAP1_C (HMM E-Value=0.24)
Length = 536
Score = 31.9 bits (69), Expect = 0.50
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 33 DVSNLVRDMASGDKEKADAAQVLADKYLQGKVILDEEVTMN----IKDDRTVINKKT--- 85
D S+ + GD + D + L G+ + EV N +K D ++N +
Sbjct: 285 DESSDESESGEGDSGEGDEDVDDGHEDLGGQALTPVEVGRNGGKIVKTDLMIVNVRNGDR 344
Query: 86 -RKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKADTFKTQAVKAFRRGEYERALSC 144
+KT + KET E +K AE++ + ++ + K + QAVK R + + A+
Sbjct: 345 EKKTVEQKEPTKKETKAMEANKSAEQK-IKKEDPKAKDTKEEIQAVK-LREDKLKEAMEV 402
Query: 145 YDRAIEQIK 153
A ++IK
Sbjct: 403 IGSAEQKIK 411
>SB_16585| Best HMM Match : MFAP1_C (HMM E-Value=0.24)
Length = 387
Score = 31.9 bits (69), Expect = 0.50
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 33 DVSNLVRDMASGDKEKADAAQVLADKYLQGKVILDEEVTMN----IKDDRTVINKKT--- 85
D S+ + GD + D + L G+ + EV N +K D ++N +
Sbjct: 136 DESSDESESGEGDSGEGDEDVDDGHEDLGGQALTPVEVGRNGGKIVKTDLMIVNVRNGDR 195
Query: 86 -RKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKADTFKTQAVKAFRRGEYERALSC 144
+KT + KET E +K AE++ + ++ + K + QAVK R + + A+
Sbjct: 196 EKKTVEQKEPTKKETKAMEANKSAEQK-IKKEDPKAKDTKEEIQAVK-LREDKLKEAMEV 253
Query: 145 YDRAIEQIK 153
A ++IK
Sbjct: 254 IGSAEQKIK 262
>SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019)
Length = 94
Score = 31.5 bits (68), Expect = 0.66
Identities = 13/50 (26%), Positives = 28/50 (56%)
Query: 159 YCDRALTNIKLGHFEKVVGDCDSALRLNEDSYKARLYLTKAYKELDEHDK 208
Y + A +KL + + DC+ AL+L+ +S KA +A + + ++++
Sbjct: 43 YLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEE 92
>SB_46110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 984
Score = 31.5 bits (68), Expect = 0.66
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 65 ILDEEVTMNIKDDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALD----RKIRRE 120
IL +E+ + ++ + T + +K RKT +++ E+ E WM + ++DA++ LD ++IR+
Sbjct: 844 ILKDELQV-LQLEHTSLEEKHRKTQEENREL-VERWMMQKARDADKVNLDNEHQQRIRQA 901
Query: 121 KADTFKTQAVK 131
K +A K
Sbjct: 902 KLQKDLIEAAK 912
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 31.5 bits (68), Expect = 0.66
Identities = 13/50 (26%), Positives = 28/50 (56%)
Query: 159 YCDRALTNIKLGHFEKVVGDCDSALRLNEDSYKARLYLTKAYKELDEHDK 208
Y + A +KL + + DC+ AL+L+ +S KA +A + + ++++
Sbjct: 370 YLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEE 419
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 31.5 bits (68), Expect = 0.66
Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Query: 65 ILDEEVTMNIKDDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKADT 124
I+D V + ++ ++ K ++ + ++ A +RA D I++ +
Sbjct: 1250 IIDTSVVDEVSSQLSMSRQRNEKLEEELKDTKEDVQRRRSDMSALKRANDVLIKQNQTLY 1309
Query: 125 FKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVV----GDCD 180
+T+++KA E++ + +I K+N + +L H EK + G+
Sbjct: 1310 LETESLKATINELSEKSAQLREVSIHLTKENEKLTTENDDIKTRLEHTEKELRKTEGERS 1369
Query: 181 SALRLNEDS 189
S LNE S
Sbjct: 1370 SVYALNESS 1378
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 31.1 bits (67), Expect = 0.87
Identities = 40/229 (17%), Positives = 104/229 (45%), Gaps = 11/229 (4%)
Query: 19 ELNEEWNNFMKRIGDVSNLVRDMASGDKEKADAAQVLADK--YLQGKVILDEEVTMNIKD 76
EL EE N ++ + LV + + + L + L+ K + +E +++
Sbjct: 2531 ELKEERRNEKQKKEEAEGLVEKLKVQRNQMIKEIEELKSEKGLLEQKQQMQDEA-QKLRN 2589
Query: 77 DRTVINKKTRKTCDDSSE-IDKETWMAEVSKDAERR---ALDRKIRREKADTFKTQAVKA 132
+ V+ K +D+++ +KE ++ K+ + +L +++ +K +K + +
Sbjct: 2590 EIEVLKKLHAIALEDANQKSEKELRREKMKKERYEKDVESLRKEMNDDKNRAYKQETLIQ 2649
Query: 133 FRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDSALRL-NEDSYK 191
+ E ++ ++ I+ K+N R LTN ++ F+ + + + ++ N +
Sbjct: 2650 SIKTENDKFKKRLEQEIKD-KENKNLELQR-LTN-QIEDFKTKLSEVEGRVKAANSEKKT 2706
Query: 192 ARLYLTKAYKELDEHDKYETSFNDLENKFPQHRDLTEYFLNKRENFEED 240
+ K + +++ ++ E ++ +K + D E LN+R++FE++
Sbjct: 2707 IEDEVKKLRETVEDKEELEEILGEMRDKRKRLHDDIEKALNERDDFEDE 2755
>SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 30.7 bits (66), Expect = 1.1
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 20 LNEEWNNFMKRIGDVSNLVRDM--ASGDKEK-ADAAQVLADKYL-QGKVILDEEVTMNIK 75
L E F++ V +L ++ AS D + AD A L D+Y+ KV+L++ +T +
Sbjct: 252 LPETTKTFLQESSKVFSLSQNTVKASVDMGRPADNAARLLDEYIGMLKVLLNKGMTAVAE 311
Query: 76 DDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKA 122
++ I +K E +++ E K AER A + + ++EKA
Sbjct: 312 AEQKGIKEKAETEAKKQEEEERKR--DEEKKKAERAAAEARKKKEKA 356
>SB_51502| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 1161
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 133 FRRGEYERALSCYDRAIEQIKDN----PMFYCDRALTNI--KLGHFEKVVGDCDSALRL- 185
F+ +YE A+SCY A+E K N C R + I +L + K + + AL L
Sbjct: 118 FKIAQYENAMSCYTAAMEIAKSNDDIQTQAACYRLMGEIHCRLHDYNKSMENSQHALSLF 177
Query: 186 ---NEDSYKARLYLTKAYKELDEHDKYETSFNDLE 217
++S +A YL ++ KYE + N+ +
Sbjct: 178 KKTVDESGQANAYLGMGSVHFNQ-GKYEDAMNNYQ 211
>SB_48189| Best HMM Match : K-box (HMM E-Value=0.34)
Length = 190
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 42 ASGDKEKADAAQVLADKYLQGKVILDEEVTMNIKDDRTVINKKTRKTCDDSSEIDKETWM 101
AS E A+AA A L+ +++ +E + +D +NK+ C+ KE ++
Sbjct: 17 ASTSWESAEAALTEAKAILEKELVSLKESQALLNEDNASLNKELVAMCE------KEKYI 70
Query: 102 AEVSKDAERRALDRKIRREK 121
V+K+ E + + K+R E+
Sbjct: 71 ISVNKELEAQISNLKMREEE 90
>SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37)
Length = 341
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/99 (19%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 63 KVILDEEVTMNIKDDRTVINKKTRKTCDDSSEIDKETWMAE-VSKDAERRALDRKIRREK 121
+++ + + +++ + ++ +T ++ S+I + WM+E + +D++++ + + RE+
Sbjct: 179 EILKSKTSSQKLQEQKQAEKEEQNRTIEEKSKIAFDKWMSEKLKRDSKKKEEEERKAREE 238
Query: 122 ADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYC 160
D + +K+ YE L + I DN YC
Sbjct: 239 KDKLIEKKMKS--EQAYEEWLKKAKSRPKSIPDN---YC 272
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 11 ALKDHNKMELNEEWNNFMKRIGDVSNLVRDMAS-----GDKEKADAAQVLADKYLQGKVI 65
A+ DH K + + ++ D+S+ ++ S G + KA +++ D+++ +V
Sbjct: 193 AIIDHEKEIVKTKMEVVKAKVSDLSHAHANVFSLFSRLGAENKALTSEI--DEFIDAQVS 250
Query: 66 LDEEVTMNIKDDRTVINKKTRK 87
EE+ MN+KD+ N K +K
Sbjct: 251 TLEEIRMNLKDEVISDNGKIKK 272
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 30.3 bits (65), Expect = 1.5
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 38 VRDMASGDKEKADAAQVLADKYLQGKVILDEEVTMNIKDDRTVINKKTRKTCDDSSEIDK 97
+ D ++GD+EK + + A +Q K +EE + + ++ + + K K + SS+ +K
Sbjct: 441 IDDASAGDEEKTEVKKEDATVEIQ-KERTEEEESSSKEEKKQESSSKEEKKQESSSKEEK 499
Query: 98 ETWMAEVSKDAERRALDRKIRREKADTFKTQAVKAFRRGEYERALSCYDR 147
+ + D E R K ++D+ K + A + E + SC R
Sbjct: 500 KQEKDDKKDDKEGRKAS-KSPAPRSDSRKEKEKPAPLKSELDIRYSCETR 548
>SB_48459| Best HMM Match : B12-binding_2 (HMM E-Value=3.3)
Length = 115
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 42 ASGDKEKADAAQVLADKYLQGKVILDEEVTMNIKDDR 78
A G + D L + YL GKV++DE VT N+ D+
Sbjct: 66 AFGGYKSGDGVPQLVEDYLAGKVMVDEFVTHNMGLDK 102
>SB_22759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/108 (21%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 25 NNFMKR-IGDVSNLVR----DMASGDKEKADAAQVLADKYLQGKVILDEEVTMNIKDDRT 79
N F+ R IG N+ D++S + D + + LQ K + + I+D ++
Sbjct: 356 NRFLSRPIGSSPNVYELDATDLSSWESNVLDRGLGILENLLQDKQPSVDPIARIIRDQQS 415
Query: 80 VINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRR-EKADTFK 126
+ T + CD+ I + W + + + + L +++++ +K +T K
Sbjct: 416 THVQHTCEVCDNRVIIGDKNWASHLVSKSHKWHLKKQMKKSDKKETEK 463
>SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 206
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 122 ADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDS 181
A+ K + + + Y A++ Y +AIE FY +R+ + + +++K + D
Sbjct: 34 AEAKKAEGNREYGLKNYVSAIALYSKAIEFAPHVATFYGNRSAAYMMISNYDKALEDALL 93
Query: 182 ALRLNEDSYKARLYLTKAY 200
++ ++ + K K +
Sbjct: 94 SIEIDNNFVKGHYRAAKCH 112
>SB_34103| Best HMM Match : TPR_1 (HMM E-Value=5.6e-23)
Length = 290
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Query: 134 RRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDSALRLNEDSYKAR 193
R G + A+ CYD ++ K+ + L N L + + GD D A+ ++ R
Sbjct: 124 RIGSLDNAIECYDEGLKLAKELGDRTGEGKLIN-NLANIYEQKGDFDRAVFY----HQRR 178
Query: 194 LYLTKAYKELDEHDKYETSFNDLENKFPQHRDLTEYF 230
L L K +LD K S ++ + R+ Y+
Sbjct: 179 LKLAKELNDLDAESKSCASIGNIHHLLGNIRESIAYY 215
>SB_31762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1038
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 119 REKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGD 178
REKAD F + + RG Y+ A+ + A + +A N +G +G+
Sbjct: 586 REKADAFIDEGCENMDRGNYQEAIESFQMAGVLYDNTNYSETGQAKANYNIGLIHARLGN 645
Query: 179 CDSALRLNEDSYKARLYL 196
+ A+ DS+ A L L
Sbjct: 646 HEEAM----DSHNAALKL 659
>SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 927
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Query: 138 YERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDSALRLNEDSYKARLYLT 197
++RA++ Y RA+ ++ + + + A + G + V A+ L + A L
Sbjct: 244 FDRAVAAYLRALNLSPNHAVVHGNLACVYYEQGLIDLAVDTYRRAIELQPNFPDAYCNLA 303
Query: 198 KAYKELDEHDKYETSFNDLENKFPQHRDLTEYFLN-KRE 235
A KE + + E +N P H D N KRE
Sbjct: 304 NALKEQGKVSEAEECYNTALQLSPTHADSLNNLANIKRE 342
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/87 (18%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 12 LKDHNKMELNEEWNNFMKRIGDVSNLVR--DMASGDKEKADAAQVLADKYLQGKVILDEE 69
L+D K N+E + I ++ N ++ +++ D +KA A +K L+G V ++
Sbjct: 1791 LEDSGKQPENDETRALQETINELENKIKESEISKEDMDKAKEALSKENKELKGTVEQLQD 1850
Query: 70 VTMNIKDDRTVINKKTRKTCDDSSEID 96
+ ++ ++ +K + ++ + +
Sbjct: 1851 AHEKLSEENRLLKRKENEQSENVDDFE 1877
>SB_32849| Best HMM Match : Toxin_10 (HMM E-Value=4.2)
Length = 322
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 56 ADKYLQGKVILDEEVTMNIKDDRTVINKKTRKTCDDSSEIDKETWMA 102
A K + ++D+ M + D T+I+K+ T DS+ IDK MA
Sbjct: 195 ACKTVSDSTLIDKRACMAVSDS-TLIDKRACTTVSDSTLIDKRACMA 240
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 66 LDEEVTMNIKDDRTVINKKTRKTCDDSSEIDKETWMA 102
L+++ D T+I+K+ KT DS+ IDK MA
Sbjct: 176 LNDKRACTTVSDSTLIDKRACKTVSDSTLIDKRACMA 212
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/110 (20%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 86 RKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKADTFK-TQAVKAFRRGEYERAL-- 142
R+T +++D++ + ++ KD +RR + A + K + K RGE E+ L
Sbjct: 607 RETAQKKAKVDRDAALEKILKDEKRRERKSGSKESTAQSGKISSKEKEILRGELEQCLLE 666
Query: 143 SCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDSALRLNEDSYKA 192
S A+E++ +AL +++L ++ + + L ++ +A
Sbjct: 667 SSPQEALERVMQVAEIGLAKAL-SVRLDSKDEEIAELQKKLDFAKEQVQA 715
>SB_24447| Best HMM Match : TolA (HMM E-Value=1.3)
Length = 325
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/112 (21%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 12 LKDHNKMELNEEWNNFMKRIGDVSNLVRDMASGDKEKADAAQVLADKYLQGKVILDEEVT 71
L+ + +++ +++ +F K GD +D + K K + ++ +K L+ E+
Sbjct: 121 LQAYKRIQYMKQYASFRKMQGDEIAEKQDKLAEAKIKQEVSKKSKEKALEENKAEKIELE 180
Query: 72 MNIKDDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKAD 123
KD + + + ++EIDK K+ ER+ +D++I++ AD
Sbjct: 181 SQKKDQEKLAKEFQKNKKKYAAEIDK--------KEKERKEIDKQIKKIIAD 224
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 128 QAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDSALRLNE 187
+A A RG+ A+ AIE +P RA + G K + D +L
Sbjct: 2 EAKYAMERGDCHSAIEQLTHAIEVAPWDPELRMMRADCYERQGDLIKAISDIKPTTKLIN 61
Query: 188 DSYKARLYLTKAYKELDE 205
D+ +A L ++K + E+ E
Sbjct: 62 DNTQAFLRMSKLHYEIGE 79
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 166 NIKLGHFEKVVGDCDSALRLNEDSYKARLYLTKAYKELDEHDKYETSFNDLENKFPQHRD 225
++KLG ++ + +C++AL ++E+ A +AY E +N+ N F + +
Sbjct: 130 HLKLGFSQEAIKECNAALSIDENDVDALCDRAEAY-------ILEEMYNEAVNDFQKAKS 182
Query: 226 LTEYFLNKRENFE 238
+ E+ +E +
Sbjct: 183 INEHLHKVQEGLD 195
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 82 NKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKAD 123
N+KTR + D E DK E S DAE +R R+K D
Sbjct: 61 NEKTRSSSGDRREKDKSNKSGEKSLDAENE--NRPSNRDKVD 100
>SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11)
Length = 1011
Score = 29.1 bits (62), Expect = 3.5
Identities = 29/147 (19%), Positives = 62/147 (42%), Gaps = 7/147 (4%)
Query: 98 ETWMAEVSKDAERRALDRKIRREKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPM 157
E + + K+AE + + +++ +T + +K R E E + R + +D+
Sbjct: 757 EKFQGIIDKNAEFFVILQDLKKNLNETREANEMKTSRIRELEDRIEKMKR--KGTEDSEK 814
Query: 158 FYCDRALTNIKLGHFEKVVGDCDSALRLNEDSYKARLYLTKAYKELDEHDKYETSF---- 213
F + + KL E + +C+ + + ++ ++ ++ +K + SF
Sbjct: 815 FMKEVSEKEKKLIAMEDKLQECNKTIEELSANVRSSQETIESLSQMLRQEKNKFSFKEAL 874
Query: 214 -NDLENKFPQHRDLTEYFLNKRENFEE 239
N+LE + Q R +TE E EE
Sbjct: 875 VNELEQRLEQERKVTEQISKALEEEEE 901
>SB_16158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/83 (21%), Positives = 39/83 (46%)
Query: 53 QVLADKYLQGKVILDEEVTMNIKDDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRA 112
Q + D++ + +V+ +E+ +K + K ++SE++ E MA K
Sbjct: 42 QKICDEHEKTRVLCVDELESRLKSEAAKEKASALKEAKEASELELEKAMATAKKAQVLLR 101
Query: 113 LDRKIRREKADTFKTQAVKAFRR 135
L + R+KA +++ V+A +
Sbjct: 102 LRARSGRDKAVKAESKRVEALMK 124
>SB_51523| Best HMM Match : TPR_2 (HMM E-Value=0.00012)
Length = 182
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 133 FRRGEYERALSCYDRAIEQIKDN 155
F+ +YE A+SCY A+E K N
Sbjct: 108 FKIAQYENAMSCYTAAMEVAKSN 130
>SB_16367| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 635
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 133 FRRGEYERALSCYDRAIEQIKDN 155
F+ +YE A+SCY A+E K N
Sbjct: 108 FKIAQYENAMSCYTAAMEVAKSN 130
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 98 ETWMAEVSKDAERRALDRKIRREKADTFKTQAVKAFRRGEY 138
E W E+ K+ E++ +K R + +T VKA R+ Y
Sbjct: 159 ELWCEEMKKETEKKKKKKKHNRGRVNTRTKAPVKAVRKKVY 199
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 76 DDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKADTFKTQA 129
+DR V K+ K D E+++ + K+AE+R D +++E D+ K A
Sbjct: 1260 EDRMVWRKEIEKGIYDDWEMEELAMLTASKKEAEKR--DELVKQESVDSQKCDA 1311
>SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 77 DRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKADTFKTQAVKAFRRG 136
+R ++ KTR D+ S + + M E +RR + +R+K + + + +R
Sbjct: 215 ERRTMSAKTRSQNDEYSHLKSQYGMTEEQLKIKRRREEAIAKRKKEEKEREEEENRRKRE 274
Query: 137 EYERALSCYDRAI 149
E E A ++A+
Sbjct: 275 EAESAFQREEQAL 287
>SB_26739| Best HMM Match : TPR_2 (HMM E-Value=1e-34)
Length = 935
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 129 AVKAFRRGEYERALSCYDRAIEQIKDNPM--FYC----DRALTNIKLGHFEKVVGDCDSA 182
A A + G YE+++ Y A++ I N F+ DRA N +L +E D D+A
Sbjct: 165 AEMAQQMGNYEQSVELYTSALQCIPPNMPHDFFVRLLRDRAEVNWQLLRYEDACSDIDTA 224
Query: 183 LRLN 186
L+++
Sbjct: 225 LKID 228
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 28.3 bits (60), Expect = 6.1
Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 2 ALNKILSNPALKDHNKMELNEEWNNFMKRIGDVSNLVRDMASGDKEKADAAQVLADKYLQ 61
+L + L+N LKD + E+ + F K G+ +L+ S KEK + ++ L
Sbjct: 1312 SLEQELAN--LKDKHSKEIEK----FAKGAGENKSLLDQKVSQMKEKVRGIKKEFEEKLA 1365
Query: 62 GKVILDEEVTMNIKDDRTVINKKTRKTCDDSSEID-KETWMAEVSKDAERRALDRKIRRE 120
K L+E++ + D + R + +E D KE + E E+ LD+ +E
Sbjct: 1366 EKSKLEEQLKQRLLDMEK--ESQNRLLEREKAEADLKEKFDLE-----EKALLDKLAEKE 1418
Query: 121 KADTFKTQAVKAFRRGEYERALSCYDRAIEQIK 153
++ Q +++ + E + L+ D++IE+++
Sbjct: 1419 NSEHELMQRIESTEQ-ENQAKLNQKDKSIEELQ 1450
>SB_25367| Best HMM Match : TPR_1 (HMM E-Value=2.4e-40)
Length = 553
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 123 DTFKTQAVKAFRR-GEYERALSCYDRAIEQIKDNPMFY 159
++ T FR+ G+YE ALSCY +A+ I Y
Sbjct: 441 ESLMTNLGHTFRKQGKYEEALSCYQQALVLIPSKASTY 478
>SB_22030| Best HMM Match : MutS_V (HMM E-Value=1e-15)
Length = 166
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 30 RIGDVSNLVRDMASGDKEKADAAQVLADKYLQGKVILDEEVTMNIKDDRTVINKKTRKTC 89
RIG NLV+ ++ E + A +L + + V++D E+ M+ R N K C
Sbjct: 38 RIGASDNLVQHQSTFMSEMLETAYILTNATEKSLVLID-EIGMSRNPPRHASN---MKNC 93
Query: 90 DDSSEIDKETWMAEVSKDAERRALDRKIRREKADTFKTQ 128
+ S + E +S++ R A + K EK+ K +
Sbjct: 94 TEKSLVLNEE--IGISRNPPRYASNMKNGTEKSLVLKNE 130
>SB_9721| Best HMM Match : Filament (HMM E-Value=0.2)
Length = 216
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 6/124 (4%)
Query: 16 NKMELNEEWNNFMKRIGDVSNLVRDMASGDK--EKADAAQVLADKYLQGKVILDEEVTMN 73
N+++ ++ N K + + + +K + + L + Q K+ LD+
Sbjct: 47 NQIQALKQSQNTHKEPSQSESTTQQLDQSEKFGNQVEEIHNLTKQLKQAKLELDQ--ANK 104
Query: 74 IKDDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKADTFKTQAVKAF 133
IKDD +N KT+ D +D KD + +D + F+T+ K F
Sbjct: 105 IKDDYEKLNSKTKSLEDKIIYLDATKRQLPKEKDELKSRVDH--LEDSIGDFETEKAKLF 162
Query: 134 RRGE 137
E
Sbjct: 163 TENE 166
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 32 GDVSNLVRDMASGDKEKADAAQVLADKYLQGKVILDEEVTMNIKDDRTVINKK-TRKTCD 90
GD N +D ASG+ + A A+K K + +++ DD+ V KK K D
Sbjct: 135 GDAGN-AKDEASGESDDAKPKTKDAEKKDDKKKVDEKKEDEKKDDDKKVDEKKEDDKKND 193
Query: 91 DSSEIDKETWMAEVSKDAERRALDRKIRREKADT 124
S+ + E +D E D K ++AD+
Sbjct: 194 SSASGESEDSDDGDDEDDEEDEEDEKDESDEADS 227
>SB_38303| Best HMM Match : Fz (HMM E-Value=9.8e-07)
Length = 528
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 177 GDCDSALRLNE--DSYKARLYLTKAYKELDEHDKYETS 212
GDC +AL + E YK +A K +++H KY+ S
Sbjct: 86 GDCKTALYVGELKACYKVECKSEEACKPIEKHSKYDMS 123
>SB_28454| Best HMM Match : SDA1 (HMM E-Value=1.7)
Length = 383
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 5 KILSNPALKDHNKMELNEEWNNFMKRIGDVSNLVRDMASGDKEKAD 50
K L D N E + +R+ D SN++R+M S KAD
Sbjct: 177 KALKEIFADDSKATTKNREQGHINERVKDASNMIREMLSEAVPKAD 222
>SB_19968| Best HMM Match : TPR_2 (HMM E-Value=1.1e-39)
Length = 604
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 133 FRRGEYERALSCYDRAIEQIKDN 155
F+ +YE A+SCY A+E K N
Sbjct: 41 FKIAQYENAMSCYTAAMEIAKSN 63
>SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1401
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 11 ALKDHNKMELNEEWNNFMKRIGDVSNLVRDMASGDKEKADAAQVLA--DKYLQGKV 64
A+K+ + EL E KR+ + RD+AS K+ A+ +LA DK LQG V
Sbjct: 674 AMKEKVEKEL-EAVRAEEKRVHAQATAARDLASAQKQVAELQALLAAKDKELQGHV 728
>SB_58247| Best HMM Match : TPR_1 (HMM E-Value=1.2e-19)
Length = 284
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 122 ADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDS 181
A+ F + F +Y+ LSC++RA+ D M A +GH +GD
Sbjct: 130 AELFNNLGLCCFYSQQYDMTLSCFERALSLASDENM-----ADVWYNIGHVALGIGDSAL 184
Query: 182 ALRLNEDSYKARLYLTKAYKEL 203
A + + A ++AY L
Sbjct: 185 AYQCFRLALAANNDHSEAYNNL 206
>SB_59055| Best HMM Match : Ribosomal_L30_N (HMM E-Value=0.55)
Length = 330
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 34 VSNLVRDMASGDKEKADAAQVLADKYLQGKVILDEEVTMNIKD---DRTVINKKTRKTCD 90
V L RD+A +D A L+DK Q +E + + K+ R + K + +
Sbjct: 83 VQGLRRDLAGASARMSDLAGELSDKQKQKLEEYEERIQLQDKELEGQREQLLKLSTLVDE 142
Query: 91 DSSEID-KETWMAEVSKDAERRALDRKIRREKADTFKTQAVK 131
EID +E ++E K + D K + + ++ + V+
Sbjct: 143 QQKEIDMREGRLSETEKSLVKHKQDIKKKGTELVKYREKLVE 184
>SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 959
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 75 KDDRTVINKKTRKTCDDSS---EIDKETWMAEVSKDAERRALDRKIRREKADTFKTQAVK 131
+D+++ + ++ + D S + +KE+ + K + R R + FKTQ
Sbjct: 744 QDEKSTLEEQVKSEVQDRSTRTDAEKESQFVKKGKYHSAVSFQRVARNTQEHFFKTQPSA 803
Query: 132 AFRRGEYERALSCYDR--AIEQIK 153
A EY R + DR ++EQ +
Sbjct: 804 ADVEREYWRIIQSRDRYVSVEQCR 827
>SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 638
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 61 QGKVILDEEVTMNIKDDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDR-KIRR 119
QGK E+ I+ +R +NK+ ++ D+ ++KET V+K+ ER +R ++ +
Sbjct: 409 QGKGA-SEQGKGEIQQERERLNKERKRANKDTERVNKET--ERVNKETERVNKERERVNK 465
Query: 120 EK 121
E+
Sbjct: 466 ER 467
>SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057)
Length = 976
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 34 VSNLVRDMASGDKEKADAAQVLADKYLQGKVILDEEVTMNIKD---DRTVINKKTRKTCD 90
V L RD+A +D A L+DK Q +E + + K+ R + K + +
Sbjct: 521 VQGLRRDLAGASARMSDLAGELSDKQKQKLEEYEERIQLQDKELEGQREQLLKLSTLVDE 580
Query: 91 DSSEID-KETWMAEVSKDAERRALDRKIRREKADTFKTQAVK 131
EID +E ++E K + D K + + ++ + V+
Sbjct: 581 QQKEIDMREGRLSETEKSLVKHKQDIKKKGTELVKYREKLVE 622
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 27.9 bits (59), Expect = 8.1
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 46 KEKADAAQVLADKYLQGKVI-LDEEVTMNIKDDRTVINKK--TRKTCDDSSE----IDKE 98
+EK D A L + L+ K ++EE + +KD ++ K T DD +DKE
Sbjct: 3720 QEKDDIANELMN--LKEKFAKVEEEYRVLVKDTESINRDKQTTVSELDDLKAKIRCLDKE 3777
Query: 99 TWMAEVSKDAERRALDRKIRREKADTFKTQAVKAFRRGEYERALSCYDRAIEQI 152
W E K E + + R ++ K ++ G+ +RAL D A + I
Sbjct: 3778 LWELEDEKQYETKRSVTERDRISRESNKNRSEIIKLEGDLQRALVQVDEANQNI 3831
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.131 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,026,452
Number of Sequences: 59808
Number of extensions: 319372
Number of successful extensions: 1161
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1090
Number of HSP's gapped (non-prelim): 113
length of query: 243
length of database: 16,821,457
effective HSP length: 80
effective length of query: 163
effective length of database: 12,036,817
effective search space: 1962001171
effective search space used: 1962001171
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)
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