GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002413-TA|BGIBMGA002413-PA|IPR003961|Fibronectin, type
III, IPR007110|Immunoglobulin-like, IPR003599|Immunoglobulin subtype,
IPR003598|Immunoglobulin subtype 2, IPR008957|Fibronectin, type
III-like fold, IPR013098|Immunoglobulin I-set
         (674 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             66   3e-12
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    26   2.8  
DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.        25   6.5  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   8.6  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 66.1 bits (154), Expect = 3e-12
 Identities = 82/330 (24%), Positives = 137/330 (41%), Gaps = 36/330 (10%)

Query: 231 SVTLEWTDSNSNGRPITGYMLTGRTHWNSTWYVISENI--PNVMEVDRYNGRKRATVSTT 288
           S+ LEW         + GY    R  W      ++E I     + V R N  +R      
Sbjct: 31  SIELEWERPRQAYGELRGY----RVRWGVREQALNEEILQGTQLAVKRINNLERGVE--- 83

Query: 289 LLPWAIYEFRIQAINILGPGQPSAPSPQFSTSGDKPYEAPANVSGGGGKTGDLTITWTPL 348
                 YEFR+  +N +G GQ +    Q  T    P   P  ++        + ITW P 
Sbjct: 84  ------YEFRVAGMNHIGIGQEAVKHLQ--TPEGSPTGPPTGIAVRFQTPDVVCITWEPP 135

Query: 349 PTSLQNGPGIHYKIFWRRNGSEVEFQSLLLKKYGNIGTYVVHISSTYFYTPYDVKVQAFN 408
               +NG    Y + + +   +++   L  ++   +   V   ++    T Y V+V+A+ 
Sbjct: 136 TREHRNGQITRYDVQFHK---KID-HGLGTERNTTVRKAV--FTNLDESTEYIVRVRAYT 189

Query: 409 DIGPGPESEVVTIYSAEDMPQVAPQLVSARSFNSTALNVTWNPIDQSRERLRGKLIGHRL 468
             G GP SE V I +  DM + AP  V A + +   + V W P+       RGKL+G+++
Sbjct: 190 KQGAGPFSEKVVIATERDMGR-APFSVQAVATSEQTVEVWWEPVPS-----RGKLVGYKI 243

Query: 469 KYWKQENKE-EECIYYLSRTTRNWALIVGLQPDTYYYVKVMAFNSAGEGPESERYLERTF 527
            Y     ++ +E    +   T + A ++ L+    Y V + A    G G  SE+    T 
Sbjct: 244 FYTMTAVEDLDEWQTKVVGVTES-ADLINLEKFAQYAVAIAAMYKTGLGKLSEK---ATV 299

Query: 528 RKAPQKPPASVNVWAHDPTTLRVVWRYVQP 557
           +  P+  P  +N+ AHD +T  +   +  P
Sbjct: 300 KVKPEDVP--LNLRAHDVSTHSMTLSWAPP 327



 Score = 61.3 bits (142), Expect = 8e-11
 Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 13/223 (5%)

Query: 400 YDVKVQAFNDIGPGPESEVVTIYSAEDMPQVAPQLVSARSFNSTALNVTWNPIDQSRERL 459
           Y+ +V   N IG G E+ V  + + E  P   P  ++ R      + +TW P   +RE  
Sbjct: 84  YEFRVAGMNHIGIGQEA-VKHLQTPEGSPTGPPTGIAVRFQTPDVVCITWEP--PTREHR 140

Query: 460 RGKLIGHRLKYWKQENKEEECIYYLSRTTRNWALIVGLQPDTYYYVKVMAFNSAGEGPES 519
            G++  + +++ K   K +  +     TT   A+   L   T Y V+V A+   G GP S
Sbjct: 141 NGQITRYDVQFHK---KIDHGLGTERNTTVRKAVFTNLDESTEYIVRVRAYTKQGAGPFS 197

Query: 520 ERYLERTFRKAPQKPPASVNVWAHDPTTLRVVWRYVQPTNEEEPLLGYKV-RLWELDQDM 578
           E+ +  T R    + P SV   A    T+ V W   +P      L+GYK+       +D+
Sbjct: 198 EKVVIATERDM-GRAPFSVQAVATSEQTVEVWW---EPVPSRGKLVGYKIFYTMTAVEDL 253

Query: 579 STANDTIVPIEHKLEAYISNIIPGKSYNLRVLAYSNGGDGRMS 621
                 +V +     A + N+     Y + + A    G G++S
Sbjct: 254 DEWQTKVVGVTE--SADLINLEKFAQYAVAIAAMYKTGLGKLS 294



 Score = 38.3 bits (85), Expect = 7e-04
 Identities = 58/248 (23%), Positives = 95/248 (38%), Gaps = 27/248 (10%)

Query: 207 HVQLRIEGPPGPPGGVQILGIQRSSVTLEW---TDSNSNGRPITGYMLTGRTHWNSTWYV 263
           H+Q     P GPP G+ +       V + W   T  + NG+ IT Y +            
Sbjct: 103 HLQTPEGSPTGPPTGIAVRFQTPDVVCITWEPPTREHRNGQ-ITRYDVQ----------- 150

Query: 264 ISENIPNVMEVDRYNGRKRATVSTTLLPWAIYEFRIQAINILGPGQPSAPSPQFSTSGDK 323
             + I + +  +R N   R  V T L     Y  R++A    G G P +     +T  D 
Sbjct: 151 FHKKIDHGLGTER-NTTVRKAVFTNLDESTEYIVRVRAYTKQGAG-PFSEKVVIATERDM 208

Query: 324 PYEAPANVSGGGGKTGDLTITWTPLPTSLQNGPGIHYKIFWRRNGSEVEFQSLLLKKYGN 383
              AP +V         + + W P+P+    G  + YKIF+     E +      K  G 
Sbjct: 209 G-RAPFSVQAVATSEQTVEVWWEPVPS---RGKLVGYKIFYTMTAVE-DLDEWQTKVVG- 262

Query: 384 IGTYVVHISSTYFYTPYDVKVQAFNDIGPGPESEVVTIYSAEDMPQVAPQLVSARSFNST 443
             T    + +   +  Y V + A    G G  SE  T+   +  P+  P  + A   ++ 
Sbjct: 263 -VTESADLINLEKFAQYAVAIAAMYKTGLGKLSEKATV---KVKPEDVPLNLRAHDVSTH 318

Query: 444 ALNVTWNP 451
           ++ ++W P
Sbjct: 319 SMTLSWAP 326



 Score = 27.5 bits (58), Expect = 1.2
 Identities = 63/249 (25%), Positives = 100/249 (40%), Gaps = 36/249 (14%)

Query: 198 KSAIGRISSHVQLRIEGPPG-PPGGVQILGIQRSSVTLEWTDSNSNGRPITGYMLTGRTH 256
           K   G  S  V +  E   G  P  VQ +     +V + W    S G+ + GY +     
Sbjct: 190 KQGAGPFSEKVVIATERDMGRAPFSVQAVATSEQTVEVWWEPVPSRGK-LVGYKI----- 243

Query: 257 WNSTWYVISENIPNVMEVDRYNGRK-RATVSTTLL---PWAIYEFRIQAINILGPGQPSA 312
               +Y ++     V ++D +  +    T S  L+    +A Y   I A+   G G+ S 
Sbjct: 244 ----FYTMTA----VEDLDEWQTKVVGVTESADLINLEKFAQYAVAIAAMYKTGLGKLS- 294

Query: 313 PSPQFSTSGDKPYEAPANVSGGGGKTGDLTITWTPLPTSLQNGPGIHYKIFWRRNGSEVE 372
              + +T   KP + P N+      T  +T++W P P  L     I+YKI +      V+
Sbjct: 295 ---EKATVKVKPEDVPLNLRAHDVSTHSMTLSWAP-PIRLN---PINYKISFDAVKEFVD 347

Query: 373 FQ-----SLLLKKYGNIGTYVVH--ISSTYFYTPYDVKVQAF-NDIGPGPESEV-VTIYS 423
            Q      +L +K   + ++V    IS    +T Y V V A   D    P +++ VT   
Sbjct: 348 SQGISQKQILPRKEIILKSHVKSHTISELSPFTTYFVNVSAVPTDYSYKPPAKITVTTQM 407

Query: 424 AEDMPQVAP 432
           A   P V P
Sbjct: 408 AARSPMVQP 416


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 26.2 bits (55), Expect = 2.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 239 SNSNGRPITGYMLTGRTHWNSTWYVISENIPNVMEVDR 276
           SNS  +   G+ +TG+  W   +Y +S   P+  E++R
Sbjct: 293 SNSQFKYPGGHHITGQLIWREYFYTMSVQNPHYGEMER 330


>DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.
          Length = 482

 Score = 25.0 bits (52), Expect = 6.5
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 11  KASYSSAQLRV---LSLKPSFKKHPLELETYGSEGGNVTLKCKPEAAPKPTF 59
           K+S + A+ R    L +     K  LE+   G+EGG VT+     + P   F
Sbjct: 403 KSSANGAEARAKVKLYVSEMVHKIDLEINERGTEGGAVTITAMERSLPPVNF 454


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 8.6
 Identities = 11/37 (29%), Positives = 15/37 (40%)

Query: 307 PGQPSAPSPQFSTSGDKPYEAPANVSGGGGKTGDLTI 343
           PG    P P    S   P E P ++S  G K   + +
Sbjct: 362 PGMSVPPQPHTHPSYGSPAEIPKHISALGAKQSKMEV 398


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.135    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,712
Number of Sequences: 2123
Number of extensions: 35831
Number of successful extensions: 78
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 72
Number of HSP's gapped (non-prelim): 7
length of query: 674
length of database: 516,269
effective HSP length: 69
effective length of query: 605
effective length of database: 369,782
effective search space: 223718110
effective search space used: 223718110
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)