GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002411-TA|BGIBMGA002411-PA|undefined
         (91 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   0.51 
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           20   3.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   6.3  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 0.51
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 36  TSSSLPAAESRESLVRPRDSSLPSPSK 62
           TS  +   +S ES +RPR S   +P K
Sbjct: 224 TSICIEIWQSSESSLRPRSSQKSAPGK 250


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 20.2 bits (40), Expect = 3.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)

Query: 47  ESLVRPRDSSLPSPS 61
           ES V    SS+PSPS
Sbjct: 122 ESTVSSSTSSIPSPS 136


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 6.3
 Identities = 7/24 (29%), Positives = 13/24 (54%)

Query: 40   LPAAESRESLVRPRDSSLPSPSKL 63
            +P   SRE   +P +   P+P ++
Sbjct: 994  IPDNPSREDCTKPPEPVTPAPPQV 1017


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.308    0.124    0.346 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,977
Number of Sequences: 317
Number of extensions: 444
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 91
length of database: 114,650
effective HSP length: 47
effective length of query: 44
effective length of database: 99,751
effective search space:  4389044
effective search space used:  4389044
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.5 bits)
S2: 37 (19.0 bits)