Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002411-TA|BGIBMGA002411-PA|undefined
(91 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0291 + 42555233-42555444,42556515-42556550,42556652-425567... 27 1.9
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 27 2.6
05_05_0131 - 22600220-22600582,22600849-22601234,22601337-226015... 27 2.6
02_03_0271 + 17139766-17140737 27 2.6
05_05_0195 + 23142830-23143714,23144288-23144314,23144657-231448... 26 3.4
10_08_0814 - 20779400-20779487,20779780-20780030,20780528-207808... 26 4.5
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434... 26 4.5
01_05_0357 - 21344146-21344575,21344629-21345455,21345782-21345784 26 4.5
11_01_0438 - 3349506-3351239 25 5.9
10_08_0233 - 16061182-16061714,16062765-16063578 25 5.9
07_03_1723 - 29038701-29039213,29039341-29039413,29039504-290395... 25 5.9
04_04_1122 + 31052497-31052629,31053133-31053191,31053285-310535... 25 5.9
03_05_0992 + 29528126-29529931 25 5.9
01_06_0357 - 28668894-28669238,28669510-28669537,28669578-286696... 25 5.9
12_01_0180 - 1335825-1335980,1336584-1336670,1336767-1336859,133... 25 7.8
06_02_0139 + 12247051-12247155,12247250-12247327,12247412-122475... 25 7.8
>01_07_0291 +
42555233-42555444,42556515-42556550,42556652-42556796,
42556885-42556938,42557130-42557260,42557830-42558056,
42558670-42558846,42558928-42559076
Length = 376
Score = 27.1 bits (57), Expect = 1.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 28 VRKLPSVPTSSSLPAAESRESLVRPRDSSLPSPS 61
+R PS P SS +P S S RPR +S S S
Sbjct: 19 IRLSPSPPASSHVPLPRSPASSARPRRASSVSLS 52
>07_03_0471 +
18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 26.6 bits (56), Expect = 2.6
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 20 PLPYDTSTVRKLPSVPTSSSLPAAESRESLVRPRDSSLPSP 60
P P +S P P +S P RE+ P SS PSP
Sbjct: 74 PSPSSSSWPPPPPPPPDASQDPDLAPREATTPPASSSSPSP 114
>05_05_0131 -
22600220-22600582,22600849-22601234,22601337-22601526,
22601636-22601805,22601909-22602053
Length = 417
Score = 26.6 bits (56), Expect = 2.6
Identities = 16/67 (23%), Positives = 23/67 (34%)
Query: 21 LPYDTSTVRKLPSVPTSSSLPAAESRESLVRPRDSSLPSPSKLAVYXXXXXXXXXXXKEN 80
L DT+ + P S P A + + PR P PS+ A +E
Sbjct: 15 LSADTARFDDADAAPASQMTPPAPAAAPMTPPRPDQAPKPSEDASAGLAIAGQAFAFREL 74
Query: 81 NKRTHHY 87
T H+
Sbjct: 75 AAATDHF 81
>02_03_0271 + 17139766-17140737
Length = 323
Score = 26.6 bits (56), Expect = 2.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 20 PLPYDTSTVRKLPSVPTSSSLPAAESRESLVRPRDSSL 57
P P+ ++ +L S T++++PAA +R S P L
Sbjct: 13 PSPWLPPSILRLRSTSTTTTIPAAAARSSAPHPLPDEL 50
>05_05_0195 +
23142830-23143714,23144288-23144314,23144657-23144866,
23144976-23145242,23146290-23146376,23146495-23146553,
23147166-23147768,23148063-23148192,23148570-23149100,
23149636-23149743,23149911-23150456,23150957-23151079,
23151494-23151709
Length = 1263
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 20 PLPYDTSTVRKLPSVPTSSSLPAAESRESLVRPRDSSLPSPSKLA 64
P P S V L ++P SS +A + + L+RP S PS + A
Sbjct: 5 PSPAAASAVEDLETLPLDSSYSSAPATDPLLRPPAS--PSAASAA 47
>10_08_0814 -
20779400-20779487,20779780-20780030,20780528-20780812,
20781563-20782008,20782095-20782485
Length = 486
Score = 25.8 bits (54), Expect = 4.5
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 7/40 (17%)
Query: 29 RKLP----SVPTSSSLPAAESRE---SLVRPRDSSLPSPS 61
RKLP + TSSS S SL RPR SS PSP+
Sbjct: 8 RKLPFFASNASTSSSTKRTRSARRLPSLTRPRASSSPSPA 47
>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
26643948-26644120,26644227-26644308,26644623-26644758,
26644777-26644833,26644905-26645120,26645939-26646335,
26646458-26646544,26647063-26647324,26648892-26648972,
26649176-26650350
Length = 1221
Score = 25.8 bits (54), Expect = 4.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 20 PLPYDTSTVRKLPSVPTSSSLPA 42
P+P+ +T R +PS P + LPA
Sbjct: 1013 PVPHAEATPRAMPSTPLAVPLPA 1035
>01_05_0357 - 21344146-21344575,21344629-21345455,21345782-21345784
Length = 419
Score = 25.8 bits (54), Expect = 4.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 20 PLPYDTSTVRKLPSVPTSSSLPAAESRES 48
P P + RK P+ PT + L A+E RE+
Sbjct: 236 PRPRLPESARKAPAAPTRTILRASELREA 264
>11_01_0438 - 3349506-3351239
Length = 577
Score = 25.4 bits (53), Expect = 5.9
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 22 PYDTSTVRKLPSVPTSSSLPAAESRESLVRPRDSSLPSPSKLAV 65
PY+ + +R+LP++P S S++ P PS +++ V
Sbjct: 262 PYNRAPLRRLPAIPGGVPRNYPSSGSSVLLPLRPDSPSHAEVLV 305
>10_08_0233 - 16061182-16061714,16062765-16063578
Length = 448
Score = 25.4 bits (53), Expect = 5.9
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 20 PLPYDTSTVRKLPSVPTSSSLPAAESRESLVRPRDSSLPSPSKLA 64
P P +S R VPT + P S S + P S P S LA
Sbjct: 105 PPPPPSSRRRHHLGVPTVNGAPLCSSSSSALPPPHSRTPPASPLA 149
>07_03_1723 - 29038701-29039213,29039341-29039413,29039504-29039594,
29039684-29039741,29039829-29039905,29040004-29040214,
29040339-29040386,29042496-29042608,29043270-29043341,
29044372-29046336,29046434-29046641,29046847-29047165,
29047813-29047937,29048024-29048157,29049089-29049164,
29049276-29049428,29049829-29050532,29050636-29050811,
29050945-29051107,29051199-29051341,29051802-29051914,
29053113-29053237,29053867-29054016,29054753-29054921,
29055201-29055418,29055499-29055709
Length = 2135
Score = 25.4 bits (53), Expect = 5.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 33 SVPTSSSLPAAESRESLVRPRDSSLPS 59
S TSSS+P E + S + SLPS
Sbjct: 1381 SASTSSSVPITEGKPSSIPATSGSLPS 1407
>04_04_1122 +
31052497-31052629,31053133-31053191,31053285-31053579,
31054099-31054279,31054739-31054956,31055522-31055739,
31055842-31055958,31056106-31056128,31056223-31056438,
31056536-31056677,31056822-31057067,31057659-31057856,
31058331-31058379,31060835-31060911,31061266-31061551,
31061661-31061841,31062149-31062344,31062630-31062738,
31062861-31062961,31063155-31063267,31063347-31063442,
31063531-31063746,31063857-31063995,31064087-31064332,
31064605-31064940
Length = 1396
Score = 25.4 bits (53), Expect = 5.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 20 PLPYDTSTVRKLPSVPTSSSLP 41
P PYDT+ V +P +SS LP
Sbjct: 97 PSPYDTAWVAMVPLPGSSSQLP 118
>03_05_0992 + 29528126-29529931
Length = 601
Score = 25.4 bits (53), Expect = 5.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 32 PSVPTSSSLPAAESRESLVRPRDSSLPSPSKLA 64
PS+P LP++ + + R SS PSPS LA
Sbjct: 88 PSLPPPGPLPSSLALLAKSFSRASSAPSPSLLA 120
>01_06_0357 -
28668894-28669238,28669510-28669537,28669578-28669635,
28669836-28669916,28670395-28670526,28670609-28670926,
28672495-28673317
Length = 594
Score = 25.4 bits (53), Expect = 5.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 21 LPYDTSTVRKLPSVPTSSSLPA 42
L + S+ R LPS+P ++SLPA
Sbjct: 51 LLFPDSSARLLPSLPPAASLPA 72
>12_01_0180 -
1335825-1335980,1336584-1336670,1336767-1336859,
1336985-1337057,1337153-1337247,1337917-1338004,
1338135-1338424
Length = 293
Score = 25.0 bits (52), Expect = 7.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 29 RKLPSVPTSSSLPAAESRESLVRPRDSSLPS 59
R P P ++ P SR + PR +SLP+
Sbjct: 14 RSTPPTPRPTAPPLLHSRRLALPPRPASLPA 44
>06_02_0139 +
12247051-12247155,12247250-12247327,12247412-12247519,
12247882-12247944,12248024-12248185,12248424-12248624,
12248663-12248725,12248915-12249244,12249870-12250034,
12250110-12251078
Length = 747
Score = 25.0 bits (52), Expect = 7.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 20 PLPYDTSTVRKLPSVP 35
P+PY +S V K+PS P
Sbjct: 552 PMPYKSSEVNKIPSDP 567
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.308 0.124 0.346
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,030,430
Number of Sequences: 37544
Number of extensions: 66289
Number of successful extensions: 202
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 186
Number of HSP's gapped (non-prelim): 17
length of query: 91
length of database: 14,793,348
effective HSP length: 69
effective length of query: 22
effective length of database: 12,202,812
effective search space: 268461864
effective search space used: 268461864
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 52 (25.0 bits)
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