Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002410-TA|BGIBMGA002410-PA|IPR009114|Angiomotin
(145 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 31 0.053
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 30 0.16
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 29 0.28
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 28 0.65
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 0.86
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 27 1.5
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 1.5
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 27 1.5
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 25 3.5
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 25 4.6
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 25 4.6
SPBC409.03 |swi5||Swi5 protein|Schizosaccharomyces pombe|chr 2||... 25 4.6
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 6.1
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 25 6.1
SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyce... 25 6.1
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.1
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 6.1
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 24 8.0
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 31.5 bits (68), Expect = 0.053
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 9 IRHMDELHSAQKKVADLESRVKELESKVAERDAMIKV-LQKHTSAAYEAGGASL 61
+R M + ++K+V+D+ +R KEL S+V A K L++ AAY AG A L
Sbjct: 340 LRDMSKYVLSEKEVSDIINRKKEL-SRVPSNIAAEKTRLRQRRQAAYVAGNAEL 392
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 29.9 bits (64), Expect = 0.16
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 2 AEARSEKIRHMDELHSA-QKKVADLE---SRVKELESKVAERDAMIKVLQKHTSAAYEAG 57
AEA + + LHSA +K ++E S VK+L S + ERD I +L+ S
Sbjct: 467 AEAVTNVQAELASLHSALEKNAQEVEYYASLVKQLTSDLEERDTYIAMLEAERSQGTAIS 526
Query: 58 GASLR 62
A LR
Sbjct: 527 RARLR 531
>SPBC12C2.02c |ste20|ste16|sterility protein
Ste20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1309
Score = 29.1 bits (62), Expect = 0.28
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 13 DELHSAQKKVADLESRVKELESKVAERDAMIKVLQKHTSAAYEAGGASLRNHSSREELVA 72
DEL S++KK+ +L S ++ + + E L + SA + +S+R A
Sbjct: 85 DELESSKKKIEELVSSIESFQGENGEAKTGSTSLTRSASATVSRKSSLQEKYSTRFSYKA 144
Query: 73 LSSGASFSSAEGVTGRYRNLTRRNYS 98
S + + G TG TR +S
Sbjct: 145 GCSDSCSVTVSG-TGELIGPTRNAHS 169
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.9 bits (59), Expect = 0.65
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 17 SAQKKVADLESRVKELESKVAERD 40
S + ++DLES+ KELE K+ E D
Sbjct: 979 SDNRTISDLESKNKELEKKLKEAD 1002
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.5 bits (58), Expect = 0.86
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 8 KIRHMDELHSAQKKVADLE---SRVKELESKVAERDAMIKVLQKHTSAAYEA 56
K RH DEL S KK+ + E S L+S++ ER+ L+++ + A
Sbjct: 728 KERHNDELDSLNKKLREFEGILSSNSSLKSEIEERNNQYVTLRENFDSLQNA 779
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 26.6 bits (56), Expect = 1.5
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 10 RHMDELHSAQKKVADLESRVKELESK 35
+ +E ++ Q+++ADL ++ ELESK
Sbjct: 453 KRANESNNLQREIADLSEQIVELESK 478
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 26.6 bits (56), Expect = 1.5
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 50 TSAAYEAGGASLRNHSSREELVALSSGASFSSAEGVTGRYRNLTRRNYSPHNDNSSGIGF 109
+S++ + +S + SS + SS +S SS+ + +T S H+ +SS
Sbjct: 168 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSS 227
Query: 110 ESSSLR 115
SSS R
Sbjct: 228 SSSSSR 233
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 26.6 bits (56), Expect = 1.5
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 30 KELESKVAERDAMIK---VLQKHTSAAYEAGGASLRNHSSREELVALSSGASFSSAEGVT 86
KEL + D + + KH +A+ + LR S + A+ S ASFSS +
Sbjct: 360 KELYGNATQSDPSLYSTWIANKHKTASSATVDSPLRRSLSVD---AMQSNASFSSYSSTS 416
Query: 87 GRYRNLTRRNYSPHNDNSS 105
++L +YS +++S+
Sbjct: 417 NTDKSLRPSSYSAVSESSN 435
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 25.4 bits (53), Expect = 3.5
Identities = 13/73 (17%), Positives = 36/73 (49%)
Query: 1 MAEARSEKIRHMDELHSAQKKVADLESRVKELESKVAERDAMIKVLQKHTSAAYEAGGAS 60
+A R E I ++ ++ + ++ + E+E +++ + ++VL+ ++ A
Sbjct: 301 IASKRPELISIAEKALESKSNLRKIQRKAAEIEKDYSDQASTLQVLENQLTSLSAAEKEF 360
Query: 61 LRNHSSREELVAL 73
L++ +E+L L
Sbjct: 361 LKDMQEKEQLKGL 373
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 25.0 bits (52), Expect = 4.6
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 3 EARSEKIRHMDELHSAQKKVADLESRVKELESKVAERDAMIKV 45
+A +K+ EL S +K+ADL++ K+ SK+ E ++ V
Sbjct: 148 KAEMKKMSEQAELES--EKMADLKNEEKKKFSKILEEAGLVAV 188
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 4.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 2 AEARSEKIRHMDELHSAQKKVADLESRVKELESKVAERDAMIK 44
AE ++EK R+ DE +++ DL+S + + K A R + IK
Sbjct: 221 AERQAEKERYEDEREKLDEQMEDLQSFLSDY--KKASRKSGIK 261
>SPBC409.03 |swi5||Swi5 protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 85
Score = 25.0 bits (52), Expect = 4.6
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 7 EKIRHMDELHSAQKKVADLESRVKELESKVAERDAMIKVLQKH 49
EK + +H +++ LES +++ +K+ RDA + +QKH
Sbjct: 2 EKSQLESRVHLLEQQKEQLESSLQDALAKLKNRDAK-QTVQKH 43
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 6.1
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 50 TSAAYEAGGASLRNHSSREELVALSSGASFSSAEGVTGRYRNLTRRNYSPHNDNSS 105
+S++ + AS +HSS SS + SSA + Y N T S H+ + S
Sbjct: 385 SSSSSSSRPASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHNSTSSRSSSHSSSHS 440
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 24.6 bits (51), Expect = 6.1
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 63 NHSSREELVALSSGAS--FSSAEGVTGRYRNLTRRNYSPHNDNSSG 106
N S+ E +V+ S S SS G +G N N +N+N+SG
Sbjct: 535 NTSNNESMVSKLSSLSGMASSFLGSSGNNNNNNNSNSGNYNNNNSG 580
>SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 218
Score = 24.6 bits (51), Expect = 6.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 12 MDELHSAQKKVADLESRVKELESKVAERDAMIKVLQK 48
M++ QKK +L+S +E++S + D + KV+ K
Sbjct: 132 MEKQFVLQKKKNELQSSTEEIDSTEKDFDELHKVILK 168
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 24.6 bits (51), Expect = 6.1
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 11 HMDELHSAQKKVADLESRVKELESKVAERDAMIKVLQKHTSAAYE 55
H+ + + K +DLE + S+ +E DA I L K YE
Sbjct: 251 HVAKNQKSLPKTSDLEQQRGTSSSQPSENDANITALPKPEPKMYE 295
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 24.6 bits (51), Expect = 6.1
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 24 DLESRVKELESKVAERDAMIKVLQ--KHTSAAYEAGGASLRNHSSREELVALSS 75
+L ++ KEL SK AE +AM K ++ K ++ + +S ++E+ L S
Sbjct: 1438 ELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAEQITKEQFEQLKS 1491
Score = 24.2 bits (50), Expect = 8.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 13 DELHSAQKKVADLESRVKELESKVAERDAMIKVLQKHTS 51
DE+ S + + LE++ K L S+ I VLQ+++S
Sbjct: 1144 DEISSLKDYILGLENQNKLLHSQFDSLSQQITVLQQNSS 1182
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 24.2 bits (50), Expect = 8.0
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 8 KIRHMDELHSAQKKVADLESRVKELESKVAERDAMIKVLQKHTSAAYEAGGASLRNHSSR 67
++R +D++ + A ES ES A R +++ A Y SL
Sbjct: 958 RVRALDQVQE-KLSAAYKESAAFACESTSAIRTVASLNREENVFAEY---CDSLIKPGRE 1013
Query: 68 EELVALSSGASFSSAEGVTGRYRNLT 93
+ +L SG FS+A+GVT LT
Sbjct: 1014 SAIASLKSGLFFSAAQGVTFLINALT 1039
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.123 0.327
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,819
Number of Sequences: 5004
Number of extensions: 20796
Number of successful extensions: 99
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 81
Number of HSP's gapped (non-prelim): 25
length of query: 145
length of database: 2,362,478
effective HSP length: 67
effective length of query: 78
effective length of database: 2,027,210
effective search space: 158122380
effective search space used: 158122380
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 50 (24.2 bits)
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