GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002410-TA|BGIBMGA002410-PA|IPR009114|Angiomotin
         (145 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    30   0.035
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   0.43 
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    26   0.57 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   2.3  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   4.0  
Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase pr...    22   9.2  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 29.9 bits (64), Expect = 0.035
 Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 3/115 (2%)

Query: 13  DELHSAQKKVADLESRVKELESKVAERDAMIKVLQKHTSAAYEAGGASLRNHSSREELVA 72
           +E+    KK+  L+  + E      +  A +K LQ   +   +  G   R   S EE + 
Sbjct: 741 EEIEELNKKIETLQKTIVEARETQTQCSAKVKDLQAKIA---DGKGHRERELKSAEEDLK 797

Query: 73  LSSGASFSSAEGVTGRYRNLTRRNYSPHNDNSSGIGFESSSLRLEEQLAALDSRL 127
            S   S  S +      ++               +  +  +++LEEQ+AAL  RL
Sbjct: 798 RSKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRL 852



 Score = 23.4 bits (48), Expect = 3.0
 Identities = 9/41 (21%), Positives = 26/41 (63%)

Query: 13  DELHSAQKKVADLESRVKELESKVAERDAMIKVLQKHTSAA 53
           D+L +A++K A+  + +K+ E ++     +++  QK+ +++
Sbjct: 400 DQLIAAKQKSAEATTAIKQSEMELKHSQQLLRDKQKNMNSS 440



 Score = 21.8 bits (44), Expect = 9.2
 Identities = 8/20 (40%), Positives = 15/20 (75%)

Query: 25  LESRVKELESKVAERDAMIK 44
           + S+ KEL++K  +RD ++K
Sbjct: 880 MNSQSKELKAKYHQRDKLLK 899


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 0.43
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 16  HSAQKKVADLESRVKELE---SKVAERDAMIKVLQKHTSAAYEAGGASLRNHSSR 67
           H+   ++AD++ R+K+L+   + V +R   + +  K    A   GG +L   S R
Sbjct: 455 HTFGAQIADVDERIKQLDGLLASVRKRTERLNLKHKVVDNASAEGGGTLGVQSPR 509


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 25.8 bits (54), Expect = 0.57
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 3   EARSEKIRHMDELHSAQKKVADLESRVKELE 33
           E+ SE+    DEL  A+    +LE R +EL+
Sbjct: 97  ESESEESEESDELEEARLVAEELEERQQELD 127


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)

Query: 25  LESRVKELESKVAERDAMIK 44
           LE  V+ELE K  ERD +I+
Sbjct: 933 LEDVVEELEGKNRERDELIR 952


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 93  TRRNYSPHNDNSSGIGFESSSLR 115
           T R+YS  N+N S  G +  SL+
Sbjct: 229 TMRDYSRKNENCSSSGGQRESLK 251


>Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase
           protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 12/47 (25%), Positives = 19/47 (40%)

Query: 48  KHTSAAYEAGGASLRNHSSREELVALSSGASFSSAEGVTGRYRNLTR 94
           K  S   ++GG  L  +  + E+V + S        G  G Y  + R
Sbjct: 184 KQDSCQGDSGGPLLVRNGDKHEIVGIVSWGVGCGRAGYPGVYTRVAR 230


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.309    0.123    0.327 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,749
Number of Sequences: 2123
Number of extensions: 4376
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 8
length of query: 145
length of database: 516,269
effective HSP length: 58
effective length of query: 87
effective length of database: 393,135
effective search space: 34202745
effective search space used: 34202745
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 44 (21.8 bits)