GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002410-TA|BGIBMGA002410-PA|IPR009114|Angiomotin
         (145 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    26   0.18 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   0.97 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   3.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   9.1  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 25.8 bits (54), Expect = 0.18
 Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 4/93 (4%)

Query: 12  MDELHSAQKKVADLESRVKELESKVAERDAMIKVLQKHTSAAYEAGGASLRNHSSREELV 71
           M  L   Q+ +   + ++ ELE+ +  RDA I+ L+ H     +     L     R    
Sbjct: 1   MGTLRELQELLRVKDEKIVELEALLCRRDAEIQELRSHLDKFLQCASLKLAFEPRRNPGP 60

Query: 72  ALSSGASFSSAEGVTGRYRNLTRRNYSPHNDNS 104
                  F  +     R+++L R   S   D S
Sbjct: 61  GSKGPRDFPRSH----RFKSLPRCQLSNKRDRS 89


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 0.97
 Identities = 15/52 (28%), Positives = 24/52 (46%)

Query: 79  FSSAEGVTGRYRNLTRRNYSPHNDNSSGIGFESSSLRLEEQLAALDSRLERA 130
           FSS    T ++    R + SP  +N S I    +S       ++ +SR E+A
Sbjct: 717 FSSLLSDTEQHFRQHRDSLSPRVENRSAIVHSEASANANSSTSSEESREEKA 768


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 107 IGFESSSLRLEEQLAALDSRLERAPVPAVSYRHPQH 142
           I  +   LR  E +  + ++L  A    ++  HPQH
Sbjct: 346 IAADRPGLRNTELVERMHNKLRNALQTVLAQNHPQH 381


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 15  LHSAQKKVADLESRVKELESKVAERDAMIKVLQKHTS 51
           LHSAQ  VA   S V  + + +      +KV  +  S
Sbjct: 942 LHSAQSVVASSASNVTNVTTNLTTILPPVKVQSQQQS 978


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.309    0.123    0.327 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,671
Number of Sequences: 429
Number of extensions: 1722
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 145
length of database: 140,377
effective HSP length: 52
effective length of query: 93
effective length of database: 118,069
effective search space: 10980417
effective search space used: 10980417
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.9 bits)
S2: 40 (20.2 bits)