GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002409-TA|BGIBMGA002409-PA|IPR009114|Angiomotin
         (508 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.94 
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    24   2.9  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    24   2.9  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   5.0  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   6.6  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   6.6  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.4 bits (53), Expect = 0.94
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)

Query: 222 KEVAQSPTPHGLTPPASPRAPPLREEP 248
           +E A SPTP  +  P+SPR+  + E+P
Sbjct: 49  EEEAASPTPGDVPTPSSPRS--ISEDP 73


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 6/51 (11%)

Query: 167 PLPKSHKEQPVTSTANYIDIGGQRIYTSP------PDHGVQEINEIPDDFL 211
           P+  S   QPV  T  Y  I  Q++Y  P         G+  INEI D+ L
Sbjct: 286 PVIDSWATQPVLPTHPYQMIKNQQVYDVPWIVSFTNSEGLYAINEIYDNAL 336


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 6/51 (11%)

Query: 167 PLPKSHKEQPVTSTANYIDIGGQRIYTSP------PDHGVQEINEIPDDFL 211
           P+  S   QPV  T  Y  I  Q++Y  P         G+  INEI D+ L
Sbjct: 286 PVIDSWATQPVLPTHPYQMIKNQQVYDVPWIVSFTNSEGLYAINEIYDNAL 336


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 13/40 (32%), Positives = 16/40 (40%)

Query: 125 PSRPTPIREHERSSSEVKHPATQSSPYHTLKKAEVGKKPS 164
           P RP P+ +  R  S      T  SP   L K+  G   S
Sbjct: 187 PDRPLPLDQKARDLSPRNGSPTDHSPVLNLSKSGGGSAGS 226


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 139 SEVKHPATQSSPYHTLKKAEVGKKPSGIPLPKSHKEQP 176
           ++V  P    SPY  +KK     +P+  P P    + P
Sbjct: 112 TQVARPPPARSPYEWIKKTSYQSQPN--PEPADFADAP 147


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 139 SEVKHPATQSSPYHTLKKAEVGKKPSGIPLPKSHKEQP 176
           ++V  P    SPY  +KK     +P+  P P    + P
Sbjct: 112 TQVARPPPARSPYEWIKKTSYQSQPN--PEPADFADAP 147


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.127    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,896
Number of Sequences: 317
Number of extensions: 3713
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 6
length of query: 508
length of database: 114,650
effective HSP length: 60
effective length of query: 448
effective length of database: 95,630
effective search space: 42842240
effective search space used: 42842240
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)