Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002409-TA|BGIBMGA002409-PA|IPR009114|Angiomotin
(508 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 34 0.054
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 31 0.50
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 29 1.5
SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces ... 28 2.7
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 28 2.7
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 3.5
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 28 3.5
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 28 3.5
SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6 |Schizosaccharo... 27 4.7
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 27 6.2
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 27 6.2
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 27 8.1
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 27 8.1
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 33.9 bits (74), Expect = 0.054
Identities = 42/198 (21%), Positives = 73/198 (36%), Gaps = 7/198 (3%)
Query: 21 QKQTVPGSFPQSLSGSETDVSTSNENLSREERYVVRHTARVEPQGQE-NQSQINNNRNSL 79
+KQ S Q + + + S+S E + R T+R+E Q +E + ++
Sbjct: 309 KKQNESSSTIQKENTVQQEASSSEEEAVKSLPETQRTTSRIETQEEEIKEEEMEGEEEEE 368
Query: 80 KESIPG-SNRNSLKDSVGGXXXXXXXXXXXXXXXXTLIIHNQDDSWPSRPTPIREHERSS 138
+E +P + N L+D VG L N + + +P + + S
Sbjct: 369 EEEVPNYESENELEDKVG--DLSLSLGVASSFVDEMLRERNNLSAEGTSASPSLDKKSES 426
Query: 139 SEVKHPATQSSPYHTLKKAEVGKKPSGIPLPKSHKEQPVTSTANYIDIGGQRIYTSPPDH 198
+ + P S P +L P+ P P + Q V + G Q +
Sbjct: 427 TNIVQP-IPSHPNDSLNPFYNSSSPTYHPQPIPPQLQQVQLLSQM--AGNQMANIQYTMN 483
Query: 199 GVQEINEIPDDFLNQSSV 216
G+Q+ P+ LN S V
Sbjct: 484 GMQQTGASPNTALNISQV 501
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 30.7 bits (66), Expect = 0.50
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 25 VPGSFPQSLSGSETDVSTSNENLSREERYVVRHTARVEPQGQENQSQI-NNNRNSLKESI 83
VP S P SETD EN + E+R R +A Q + + NR +L+
Sbjct: 1347 VPDSTPSDAVASETDNKNLVENKAVEKRVEARSSANERKQEERRRKTTPEGNRRALRTRT 1406
Query: 84 PGSNRNSLKDS 94
P + DS
Sbjct: 1407 PTNEDIQRSDS 1417
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 29.1 bits (62), Expect = 1.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 200 VQEINEIPDDFLNQSSVLKHLAKEVAQSPTP 230
++EIN+IP++ + QS +L K+ SP P
Sbjct: 167 LEEINKIPENIVTQSLSYTNLLKKFETSPNP 197
>SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 252
Score = 28.3 bits (60), Expect = 2.7
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 8 GRFLSFTNNIQ-RAQKQTVPGSFPQSLSGSETDVSTSNENLSREERYVVRHTA---RVEP 63
GRF S ++ + K +PGS P + + S D T++++ +E+ + R +P
Sbjct: 114 GRFPSSSSEFPPKNSKYQLPGSMPNTGASSSQDPFTNSQSTEKEDAMYSKDNGFEDRSKP 173
Query: 64 QGQENQSQINNNRNSLKESIP 84
+ N NRN+ S P
Sbjct: 174 ASAWEAIR-NRNRNTGNNSFP 193
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 31 QSLSGSETDVSTSNENLSREERYVVRHTARVEPQGQENQSQINNNRNSLKESIPGSNRNS 90
QS S+T +T + +E + H + + PQ + + + NR + ++ IP + +S
Sbjct: 71 QSPVSSQTTYATPSAYAVPQESEIELHESEMVPQKPKKKKRSRRNRKASRKKIPATQSSS 130
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 3.5
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 163 PSGIPLPKSHKEQPVTSTANYIDIGGQRIYTSPPDHGVQEINEIPDDFLNQSSVLKHLAK 222
PS P + V Y GG +I PP + +P ++S +
Sbjct: 980 PSNPYTPIAVASSTVNPAHTYKPHGGSQI-VPPPKQPANRVVPLPPTASQRASAYEPPTV 1038
Query: 223 EVAQSPTPHGLTPPASPRAPPL 244
V P+P L+P +P+ PP+
Sbjct: 1039 SV---PSPSALSPSVTPQLPPV 1057
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 27.9 bits (59), Expect = 3.5
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 422 RQEIEMAAQRATLQEQRTHIDIL--DTALTNAQANVVRLEEECRHAGGYVERVLGLQRAL 479
++E E+AAQRA Q+Q + + L + A +R E+E +++ +A
Sbjct: 580 QREAELAAQRALKQKQESEAESLRVQEEINKRNAERIRREKEAIRI-NEAKKLAEELKAK 638
Query: 480 GSLQHAADRREHSER-QLRA-QLE 501
G L+ A+ EH + +LRA Q+E
Sbjct: 639 GGLEVNAEDLEHLDADKLRAMQIE 662
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 45 ENLSREERYVVRHTARVEPQGQENQSQINNN----RNSLKESIPGSNR 88
ENLS E +++ A +E + + ++N N RN LK I NR
Sbjct: 794 ENLSHEFDAIIKERAHIEARKTALEYELNTNLYLRRNPLKAEIGSDNR 841
>SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 27.5 bits (58), Expect = 4.7
Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 127 RPTPIREHERSSSEVKHPATQSSPYHTLKKAEVGKKPSGIPLPKSHKEQPVTSTANYIDI 186
R + + +R SS++ H S+P + ++ + + K K++ + + I
Sbjct: 648 RDLGLNKQKRDSSKLNHKEP-SNPIEE-RNEDIEPSEASTSVSKKRKQKKKKKNSGKLTI 705
Query: 187 GGQRIYTSPPDHGVQEINEIPDDFLNQSSVLKHLAKEVAQS 227
+ + P INE P D+ NQ + + L +V ++
Sbjct: 706 EAEHVSNDSPI-----INEAPFDYKNQKNFIADLDSDVGKN 741
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/87 (21%), Positives = 38/87 (43%)
Query: 406 EVDCLLTDKELACAKERQEIEMAAQRATLQEQRTHIDILDTALTNAQANVVRLEEECRHA 465
EV+ +L D+E ++ Q+ A + TLQ + + + + ++++ R
Sbjct: 80 EVEKILRDEERIKKRKIQKNRAANLQRTLQPPKRPTPSAASEVPKKKYKKIKVDPSARRT 139
Query: 466 GGYVERVLGLQRALGSLQHAADRREHS 492
+ VL Q LQ A RR+++
Sbjct: 140 SSRMHTVLMAQSTETRLQEAKPRRKYT 166
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 27.1 bits (57), Expect = 6.2
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 118 HNQDDSWPSRPTPIREHERSSSEVKHPATQSSPYH 152
H Q+DS S +P H + + P+T +S +H
Sbjct: 87 HQQEDSGNSSQSPTSPHPSNQPAMLSPSTAASQHH 121
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 8.1
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 12 SFTNNIQRAQKQTVPGSFPQSLSGSETDVSTSNENLSREERYVVRHTARVEPQGQENQSQ 71
S +NI + +++V ++ +SL + +NE + VV T E G+ +S
Sbjct: 727 SIVSNILASLEKSVHKNY-ESLRSQLLEYKAANEKHTEAILSVVSSTL-TENTGKILESV 784
Query: 72 INNNRN-SLKESIPGSNRNSLKDSV 95
+ + +LKE I S RN+LK+++
Sbjct: 785 VEKSMQVALKEEIANSVRNALKNNL 809
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 207 PDDFLNQSSVLKHLAKEVAQSPTPHGLTPPASPRAPPLREEP 248
PDD N + K A + Q P PP SP+ L P
Sbjct: 158 PDDDGNAGQIYKTTANHLIQIPAKGTPLPPISPKTNVLARYP 199
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.127 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,876,685
Number of Sequences: 5004
Number of extensions: 70660
Number of successful extensions: 195
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 189
Number of HSP's gapped (non-prelim): 14
length of query: 508
length of database: 2,362,478
effective HSP length: 76
effective length of query: 432
effective length of database: 1,982,174
effective search space: 856299168
effective search space used: 856299168
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)
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