GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002409-TA|BGIBMGA002409-PA|IPR009114|Angiomotin
         (508 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.5  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   6.0  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    23   6.0  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    23   7.9  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    23   7.9  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    23   7.9  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    23   7.9  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    23   7.9  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    23   7.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 4/31 (12%)

Query: 404 VSEVDCLLTDKELACAKERQEIEMAAQRATL 434
           V EVD    DKEL+ A+E +E+E A  +  L
Sbjct: 693 VDEVD----DKELSGAEEEKEVEKALLKPLL 719


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 29  FPQSLSGSETDVSTSNENLSREERYVVRHTARVEPQ 64
           F +SL   E   +   E LSRE+R++ R   ++  Q
Sbjct: 96  FIKSLEERERKHAVHKEQLSREQRFLRRRLEQLTNQ 131


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 5   RPTGRFLSFTNNIQRAQKQTVPGSFPQ 31
           RP G F+S    I R +    P SFP+
Sbjct: 360 RPMGPFVSIQEQIPRLRYIGPPTSFPR 386


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 5   RPTGRFLSFTNNIQRAQKQTVPGSFPQ 31
           RP G F+S    I R +    P SFP+
Sbjct: 360 RPMGPFVSIQEQIPRFRYIGPPTSFPR 386


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 5   RPTGRFLSFTNNIQRAQKQTVPGSFPQ 31
           RP G F+S    I R +    P SFP+
Sbjct: 360 RPMGPFVSIQEQIPRFRYIGPPTSFPR 386


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 5   RPTGRFLSFTNNIQRAQKQTVPGSFPQ 31
           RP G F+S    I R +    P SFP+
Sbjct: 360 RPMGPFVSIQEQIPRFRYIGPPTSFPR 386


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 5   RPTGRFLSFTNNIQRAQKQTVPGSFPQ 31
           RP G F+S    I R +    P SFP+
Sbjct: 349 RPMGPFVSIQEQIPRFRYIGPPTSFPR 375


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 398 KCVLEWVSEVDCLLTDKELACAKERQE 424
           +CV +   E +C++  K + CA E+ +
Sbjct: 98  QCVSKAADEDECMVARKYIDCALEKMK 124


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 398 KCVLEWVSEVDCLLTDKELACAKERQE 424
           +CV +   E +C++  K + CA E+ +
Sbjct: 98  QCVSKAADEDECMVARKYIDCALEKMK 124


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.127    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,391
Number of Sequences: 429
Number of extensions: 5211
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 9
length of query: 508
length of database: 140,377
effective HSP length: 61
effective length of query: 447
effective length of database: 114,208
effective search space: 51050976
effective search space used: 51050976
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 46 (22.6 bits)