GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002408-TA|BGIBMGA002408-PA|undefined
         (101 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    20   4.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    20   4.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    19   7.6  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 9/38 (23%), Positives = 21/38 (55%)

Query: 17  TRTPERVHESREMERQIFDKELFIDEIEKRPATWDLVS 54
           +RT +  +++     +I++K    +E++KR     LV+
Sbjct: 339 SRTQQSANKTATFVHEIWNKYALKNEVDKRVRHLQLVA 376


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 9/38 (23%), Positives = 21/38 (55%)

Query: 17  TRTPERVHESREMERQIFDKELFIDEIEKRPATWDLVS 54
           +RT +  +++     +I++K    +E++KR     LV+
Sbjct: 295 SRTQQSANKTATFVHEIWNKYALKNEVDKRVRHLQLVA 332


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 13  RPANTRTPERVHES 26
           +P  T+TPE  +ES
Sbjct: 426 KPQTTKTPESGNES 439


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.134    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,910
Number of Sequences: 317
Number of extensions: 705
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 101
length of database: 114,650
effective HSP length: 48
effective length of query: 53
effective length of database: 99,434
effective search space:  5270002
effective search space used:  5270002
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.7 bits)
S2: 38 (19.4 bits)