Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002407-TA|BGIBMGA002407-PA|IPR001763|Rhodanese-like
(101 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4H3.07c |||protein phosphatase Fmp31 |Schizosaccharomyces po... 78 2e-16
SPBC13E7.08c |||RNA polymerase II associated Paf1 complex |Schiz... 28 0.32
SPCC4B3.01 ||SPCP25A2.01c|thiosulfate sulfurtransferase|Schizosa... 27 0.42
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 0.56
SPCC1494.01 ||SPCC965.15|iron/ascorbate oxidoreductase family|Sc... 27 0.74
SPAC17A2.09c |csx1||RNA-binding protein Csx1|Schizosaccharomyces... 27 0.74
SPAC31G5.10 |eta2||Myb family transcriptional regulator Eta2|Sch... 26 1.3
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 25 1.7
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 1.7
SPBC21.01 |mis17|SPBC776.19|kinetochore protein Mis17|Schizosacc... 25 2.3
SPBC4F6.16c |ero11||ER oxidoreductin Ero1a|Schizosaccharomyces p... 25 3.0
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 24 5.2
SPCC191.01 ||SPCC417.13|sequence orphan|Schizosaccharomyces pomb... 24 5.2
SPAC343.14c |||translation initiation factor eIF2B|Schizosacchar... 24 5.2
SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces pom... 23 6.9
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 23 6.9
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 23 9.1
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 23 9.1
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 23 9.1
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 23 9.1
SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|c... 23 9.1
>SPAC4H3.07c |||protein phosphatase Fmp31 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 171
Score = 78.2 bits (184), Expect = 2e-16
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 23 VLIDVRNPDEVNTTGKIPSSINIPLNSVQEVLVSMSNEEFKKQYQRNKPSSTDELIFYCQ 82
VLIDVR PDE G I +S N+P+ ++E + +S+EEF K Y +KP D ++ YC+
Sbjct: 77 VLIDVREPDEFKQ-GAIETSYNLPVGKIEEAM-KLSDEEFSKTYGFSKPVFEDNVVVYCR 134
Query: 83 SGRRSTEALDIALKLGY 99
SGRRST A DI KLGY
Sbjct: 135 SGRRSTTASDILTKLGY 151
>SPBC13E7.08c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 27.9 bits (59), Expect = 0.32
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Query: 30 PDEVNTT--GKIPS----SINIPLNSVQEVLVSMSNEEFKKQYQR 68
P +NT K+PS ++ +P SVQE+++ E K+Q ++
Sbjct: 208 PSAINTATRSKLPSMRLTTVQVPSRSVQEIIIEKDPELLKRQAEK 252
>SPCC4B3.01 ||SPCP25A2.01c|thiosulfate
sulfurtransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 298
Score = 27.5 bits (58), Expect = 0.42
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 16/94 (17%)
Query: 7 VVSYEDVLKVIHQPEKV---LIDVR-------NPDEVN---TTGKIPSSINIPLNSVQEV 53
V S++D++KVI P+ ++D R N E +G IP+SINIP
Sbjct: 162 VASFDDIVKVIESPDAAGVHIVDARAHERFLGNVPESRPGLASGHIPTSINIPFTETTAA 221
Query: 54 LVSMSNEEFKKQYQRNKPSSTDE---LIFYCQSG 84
++ E + + TD+ +I C SG
Sbjct: 222 GITAPKPEEDLEKVFSSHGLTDKSVPIITSCGSG 255
>SPCC757.09c |rnc1||RNA-binding protein that suppresses
calcineurin deletion Rnc1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 0.56
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 15 KVIHQPEKVLIDVR---NPDEVNTTGKIPSSINIPLNSVQEVLVSMSNEEFKKQYQRNKP 71
K I + E DV PDE +T + ++IP L +++N +Q N+P
Sbjct: 10 KNIEEKENSFFDVTFQDEPDETTSTATGIAKVSIPTPKPSTPLSTLTNGSTIQQSMTNQP 69
Query: 72 SSTDEL 77
T ++
Sbjct: 70 EPTSQV 75
>SPCC1494.01 ||SPCC965.15|iron/ascorbate oxidoreductase
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 321
Score = 26.6 bits (56), Expect = 0.74
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 2 VDPRRVVSYEDVLKVIHQPEKVLIDVRNPDEVNTTGKIPSSIN 44
+ P V D +KV QP+ VL+++ + + T+GK+ S+++
Sbjct: 205 IRPPNFVKDMDWIKVNVQPDVVLVNIADMLQFWTSGKLRSTVH 247
>SPAC17A2.09c |csx1||RNA-binding protein Csx1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 26.6 bits (56), Expect = 0.74
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 50 VQEVLVSMSNEEFKKQYQRNKPSSTDELIFYCQSGRRSTEALDIAL 95
+Q++ S+ NE + R+K SS++ LI YC S+ A + AL
Sbjct: 101 IQQLWASL-NEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERAL 145
>SPAC31G5.10 |eta2||Myb family transcriptional regulator
Eta2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.8 bits (54), Expect = 1.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 34 NTTGKIPSSINIPLNSVQEVLVSMSNEEFKKQYQR 68
N +IP+S +I +S+ + L + S E +KQY++
Sbjct: 423 NIQREIPASDSIAWHSISKKLGTKSPESCRKQYEK 457
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 25.4 bits (53), Expect = 1.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 52 EVLVSMSNEEFKKQYQRNKPSSTDELIFYCQSG 84
EV++ +EF K+ R P + ++ IF SG
Sbjct: 147 EVIILRPEDEFLKKMNRCPPLTREQAIFQISSG 179
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.4 bits (53), Expect = 1.7
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 21 EKVLIDVRNPDEVNTTGKIPSSINIPLNSVQEVLVSMSNEEFK-KQYQRNKPSSTDELIF 79
++++ +V ++ + K N + +++ + NE + K+Y R K SS D ++
Sbjct: 54 DRIVTEVNYEQQLRNSEKKLLQSNERYDLLEDERKLLENELSQIKEYLREKSSSYDTVLH 113
Query: 80 YCQSGRRSTEAL 91
C S + EAL
Sbjct: 114 DCSSLKSVNEAL 125
>SPBC21.01 |mis17|SPBC776.19|kinetochore protein
Mis17|Schizosaccharomyces pombe|chr 2|||Manual
Length = 441
Score = 25.0 bits (52), Expect = 2.3
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 49 SVQEVLVSMSNEEFKKQYQRNKPSSTDELIFYCQSGRRSTE 89
SVQ + + NE K +Q+N D+ C++ + E
Sbjct: 353 SVQRKKIQLRNEYIKLSHQQNFLDDIDDFFSQCETVKNELE 393
>SPBC4F6.16c |ero11||ER oxidoreductin Ero1a|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 467
Score = 24.6 bits (51), Expect = 3.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 6 RVVSYEDVLKVIHQPEKVLIDVRNPDE----VNTTGKIPSSI 43
++ Y LK++ +PE L D+R P+E VNT +I S+
Sbjct: 368 QITGYGTALKLLLEPETQLSDLR-PEEVVALVNTFDRISHSV 408
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 23.8 bits (49), Expect = 5.2
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 32 EVNTTGKIPSSINIPLN---SVQEVLVSMSNEEFKKQYQRNKPSSTDE 76
E T +P+ + P++ S++E L EE +KQY +NK S E
Sbjct: 243 EFVTKFPVPNIKHAPISLTASLEEYLNDPDFEENRKQYLQNKSGSPVE 290
>SPCC191.01 ||SPCC417.13|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 178
Score = 23.8 bits (49), Expect = 5.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 26 DVRNPDEVNTTGKIPSSINIPLNSVQEVLVSMSNEEFKKQ 65
D+ P E P+ IP + V+E + S S+EE +++
Sbjct: 136 DMPTPGEQKEAPPSPAQEAIPESPVEEAIASDSDEEEEEE 175
>SPAC343.14c |||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 23.8 bits (49), Expect = 5.2
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 10 YEDVLKVIHQPEKVLIDVRNPDEVNTTGKIPSSINIPLNSVQEVLVSM 57
Y+++LK + EK+++ N + IPS+ + + S + V V M
Sbjct: 90 YQELLKTADENEKLIVSSSNSSSPSQKRDIPSNEKL-VQSHEPVSVQM 136
>SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 605
Score = 23.4 bits (48), Expect = 6.9
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 30 PDEVNTTGKIPSSINIPLNSVQEVLVSMSNEEFKKQYQRNKPSST 74
P+ V T S+ + PL L + NE+ + YQ K T
Sbjct: 461 PEVVQTKPFATSTPDTPLKEFTTTLKDVDNEQASEFYQLEKEPDT 505
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 23.4 bits (48), Expect = 6.9
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 32 EVNTTGKIPSSINIPLNSVQEVLVSMSNEEFKKQYQRNKP 71
+VN +PSS ++ +S + S S + Q Q +P
Sbjct: 247 KVNMNSNVPSSDSVRNSSPNQYYASTSKQSIPSQSQNLQP 286
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 23.0 bits (47), Expect = 9.1
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 11 EDVLKVIHQPEKVLIDVRNPDEVNTTGKIPSSINIPLNSVQEVLVSMSNE 60
E L+ + +K + +V PD +N +I ++ I LVS S++
Sbjct: 22 EGFLQSSNDVQKAIDEVHYPDSLNDLSEISKNLYISSWKTASELVSTSDK 71
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit
Cog6 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 23.0 bits (47), Expect = 9.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 41 SSINIPLNSVQEVLVSMSNEEFKKQYQRNK 70
SSIN +VQ L +S +FK + + K
Sbjct: 32 SSINYADRNVQAALEQLSERKFKNEREARK 61
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 23.0 bits (47), Expect = 9.1
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 17 IHQPEKVLIDVRNPDEVNTTGKIPSSINIPL-----NSVQEVLVSM-----SNEEFKKQY 66
+ PE + +N D T +I S+IN + N+V E ++ + S+E +KQ
Sbjct: 659 VKSPENIEKLKQNDDHFEVTEEITSTINSKISEKQENNVAETILEVTSSPKSSENSQKQS 718
Query: 67 QRNKPSSTDE 76
+ K DE
Sbjct: 719 EITKKRGRDE 728
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 23.0 bits (47), Expect = 9.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 43 INIPLNSVQEVLVSMSNEEFKKQYQRNKPS 72
IN + E+L++ +F+K +QRN S
Sbjct: 183 INTKFPQIGELLLTRLIVQFRKSFQRNDKS 212
>SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 23.0 bits (47), Expect = 9.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 8 VSYEDVLKVIHQPEKVLIDVRNPDEV 33
V+ E++ KV+ + E+ V NP+EV
Sbjct: 436 VAKEEMHKVMQKNEEKYAQVENPEEV 461
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.131 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,026
Number of Sequences: 5004
Number of extensions: 19282
Number of successful extensions: 66
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 45
Number of HSP's gapped (non-prelim): 22
length of query: 101
length of database: 2,362,478
effective HSP length: 63
effective length of query: 38
effective length of database: 2,047,226
effective search space: 77794588
effective search space used: 77794588
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 47 (23.0 bits)
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