Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002407-TA|BGIBMGA002407-PA|IPR001763|Rhodanese-like
(101 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3284| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 6e-15
SB_3285| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 2e-12
SB_35542| Best HMM Match : Rhodanese (HMM E-Value=2.9) 37 0.003
SB_9913| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.004
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 29 0.89
SB_40965| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.2
SB_4514| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.2
SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_59547| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.1
SB_33622| Best HMM Match : DUF427 (HMM E-Value=0.98) 27 2.1
SB_30469| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.1
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 27 2.7
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 27 2.7
SB_53389| Best HMM Match : Exo_endo_phos (HMM E-Value=6.3e-10) 27 3.6
SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.6
SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13) 27 3.6
SB_11815| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.002) 27 3.6
SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.6
SB_50621| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.6
SB_36289| Best HMM Match : RNA_pol_N (HMM E-Value=1.9) 27 3.6
SB_30701| Best HMM Match : Lipase_GDSL (HMM E-Value=0.022) 27 3.6
SB_29903| Best HMM Match : SAP (HMM E-Value=2.2e-11) 27 3.6
SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0) 27 3.6
SB_5475| Best HMM Match : Endonuclease_7 (HMM E-Value=0.084) 27 3.6
SB_44891| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.7
SB_33753| Best HMM Match : bZIP_Maf (HMM E-Value=2.3) 26 4.7
SB_23707| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=2.2) 26 4.7
SB_13283| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.7
SB_6203| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.7
SB_14870| Best HMM Match : Endonuclease_7 (HMM E-Value=0.24) 26 6.3
SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.3
SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19) 25 8.3
>SB_3284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 75.8 bits (178), Expect = 6e-15
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 3 DPRRVVSYEDVLKVIHQPEKVLIDVRNPDEVNTTGKIPSSINIPLNSVQEVLVSMSNEEF 62
DP VS E++ +I Q L DVR P E+ +GKIP SINIPL V E +M +EF
Sbjct: 281 DPETEVSIEELQLLIKQQAIQLFDVREPYELEESGKIPFSINIPLRQVPEAF-TMKPKEF 339
Query: 63 KKQYQRNKPSSTD-ELIFYCQSGRRSTEALDIALKLGY 99
K +Y KP D +++F+C++G RS AL +G+
Sbjct: 340 KLKYGAKKPKRKDTDIVFHCKAGIRSKTALKAVRSMGF 377
Score = 60.9 bits (141), Expect = 2e-10
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 24 LIDVRNPDEVNTTGKIPSSINIPLNSVQEVLVSMSNEEFKKQYQRNKPSSTD-ELIFYCQ 82
L DVRNP+E+ TG+IP ++NIPL+ + + + F++ Y PS TD ++F+C+
Sbjct: 445 LFDVRNPEELLETGQIPGAVNIPLSDITAAFM-LPPAIFEQIYDVPMPSKTDNNIVFHCK 503
Query: 83 SGRRSTEALDIALKLGY 99
+G R+ A+D LG+
Sbjct: 504 TGVRAQNAIDTLKNLGF 520
>SB_3285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1437
Score = 67.7 bits (158), Expect = 2e-12
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 14 LKVIHQPEKV-LIDVRNPDEVNTTGKIPSSINIPLNSVQEVLVSMSNEEFKKQYQRNKPS 72
LK + E + L DVR+P+E+ TG+IP ++NIPL+ + S+ F++ Y PS
Sbjct: 65 LKELLSKEDIQLFDVRDPEELLETGQIPGAVNIPLSDITSAF-SLPPNIFEQIYDVPMPS 123
Query: 73 STD-ELIFYCQSGRRSTEALDIALKLGYS 100
TD ++F+C++GRRS +A+D +GY+
Sbjct: 124 KTDNNIVFHCRTGRRSQQAIDTLQNIGYT 152
Score = 62.9 bits (146), Expect = 4e-11
Identities = 29/87 (33%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 15 KVIHQPEKVLIDVRNPDEVNTTGKIPSSINIPLNSVQEVLVSMSNEEFKKQYQRNKPSST 74
K+I + L DVR+ +E+ +G+IP ++NIPL+ + S++ E+F++ Y+ P T
Sbjct: 207 KLISEKNIQLFDVRSREEIMQSGEIPMAVNIPLSDIASAF-SLAPEKFEQTYRVPMPKKT 265
Query: 75 D-ELIFYCQSGRRSTEALDIALKLGYS 100
D ++ +C+SGRR+ A++I + G++
Sbjct: 266 DNNIVIHCRSGRRAERAMEILREHGFT 292
Score = 58.8 bits (136), Expect = 7e-10
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 15 KVIHQPEKVLIDVRNPDEVNTTGKIPSSINIPLNSVQEVLVSMSNEEFKKQYQRNKPSST 74
K++ + L DVRNP+EV GKIP ++NIPL + ++S F+ Y+ P +
Sbjct: 385 KLMAEKNIQLFDVRNPEEVFEAGKIPGAVNIPLTDFESAF-ALSPVVFEFVYRAPMPKKS 443
Query: 75 D-ELIFYCQSGRRSTEALDIALKLGYS 100
D ++ +C SG + EA+DI + G++
Sbjct: 444 DNNIVIHCISGEHAQEAIDILKENGFT 470
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 77 LIFYCQSGRRSTEALDIALKLGYSK 101
L F C SGRR+ E + GY K
Sbjct: 854 LTFICNSGRRNGENSQLGAPFGYLK 878
>SB_35542| Best HMM Match : Rhodanese (HMM E-Value=2.9)
Length = 82
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/46 (32%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 56 SMSNEEFKKQYQRNKPSSTDE-LIFYCQSGRRSTEALDIALKLGYS 100
S++ E+F++ Y+ P TD ++ +C+SGRR+ A++I + G++
Sbjct: 9 SLTPEKFEQTYRVPMPKKTDNNIVIHCRSGRRAERAMEILREHGFT 54
>SB_9913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 36.3 bits (80), Expect = 0.004
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 24 LIDVRNPDEVNTTGKIPSSINIP 46
L DVRNP+E+ TG+IP ++NIP
Sbjct: 77 LFDVRNPEELLETGQIPGAVNIP 99
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 28.7 bits (61), Expect = 0.89
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 13 VLKVIHQPEKVLIDVRNPDEVNTTGKIPSSINIPLNSVQEVLVSMSN 59
++++ + EK+ + V P+EV+ GK+ SS+N ++QE + S+ N
Sbjct: 217 IVELPYAGEKLSMVVLLPNEVDGLGKLESSLN--KETLQEAMTSLRN 261
>SB_40965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 55
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 52 EVLVSMSNEEFKKQYQRNKPSSTDE-LIFYCQSGRRSTEALDIALKLGYS 100
E ++S F+ Y+ P +D ++ +C SG + EA+DI + G++
Sbjct: 5 ESAFALSPVVFEFVYRAPMPKKSDNNIVIHCISGEHAQEAIDILKENGFT 54
>SB_4514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 52 EVLVSMSNEEFKKQYQRNKPSSTDE-LIFYCQSGRRSTEALDIALKLGYS 100
E ++S F+ Y+ P +D ++ +C SG + EA+DI + G++
Sbjct: 5 ESAFALSPVVFEFVYRAPMPKKSDNNIVIHCISGEHAQEAIDILKENGFT 54
>SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 27.9 bits (59), Expect = 1.6
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 2 VDPRRVVSYEDV----LKVIHQPEKVLIDVRNPDEVNTTGKIPSSINIPL-NSVQEVLVS 56
+DP+ VS E++ LK+ + +V D++N +E+ GK+ + I + +S +
Sbjct: 197 LDPKVEVSKEEIDAEILKLKDKKAEVDADIKNLEEIKAKGKVDQDVPIVVQDSRGKREAV 256
Query: 57 MSNEEFKKQYQRNKPSSTDEL 77
+ + + K + + +K S DE+
Sbjct: 257 LEHNDGKAKDEVSKNDSKDEV 277
>SB_59547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 27.5 bits (58), Expect = 2.1
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 33 VNTTGKIPSSINIPLNSVQEVLVSMSNEEFKKQYQRNKPSSTDELIFYCQSGRRSTEALD 92
+ T ++P+S N+ + EV+V + Q+ ++P T+ I Y G R T
Sbjct: 355 ITATNRLPTSANLEV----EVIVEFPLQLLTAQWYVDRPYKTEGDIIYLSIGERVTVYAQ 410
Query: 93 IA 94
+A
Sbjct: 411 VA 412
>SB_33622| Best HMM Match : DUF427 (HMM E-Value=0.98)
Length = 265
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 57 MSNEEFKKQYQRNKPSSTDELIFYCQSGRRSTEALDIALKLGYSK 101
+ NE+F+K +Q+ +P D +++ G+ + L IA + SK
Sbjct: 78 LQNEDFRKSWQQKRPQFPDRRVWW-DLGKFHLKRLAIAASVRLSK 121
>SB_30469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 17 IHQPEKVLIDVRNPDEVNTTGKIPSSIN 44
IH P V D+R+P VN + P S+N
Sbjct: 204 IHHPCSVNQDIRHPGSVNQNIRHPGSVN 231
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/75 (20%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 11 EDVLKVIHQPEKVLI-DVRNPDEVNTT-GKIPSSINIPLNSVQEVLVSMSNEEFKKQYQR 68
++ +K++ + EK + + + +NT K+P+++ P + QE+ + E+ K
Sbjct: 167 DEEVKLLEEKEKQQVKEKKEKARINTREAKLPTNVKTPAKTDQELTFLANREKDKGNDAF 226
Query: 69 NKPSSTDELIFYCQS 83
+ L++Y +S
Sbjct: 227 RSGDYKESLVYYTRS 241
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 YEDVLKVIHQPE-KVLIDV--RNPDEVNTTGKIPSSINIPLNSVQEVLVSMSNEE 61
YE+ L V + + ID+ + N +G + SS+N PL S ++++ + N++
Sbjct: 1147 YEEALTVAERARSRDFIDLLLQRQGGANISGDLTSSLNNPLGSTEQIMNFVKNQK 1201
>SB_53389| Best HMM Match : Exo_endo_phos (HMM E-Value=6.3e-10)
Length = 774
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 52 EVLVSMSNEEFKKQYQRNKPSSTDELI 78
+++VSM +++ K + NKPSS D+++
Sbjct: 12 KLVVSMLSKDLYKNHPDNKPSSQDQVL 38
>SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3066
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 6 RVVSYEDVLKVIHQPEKVLIDVRN---PDEVNTTGKIPSSINIPLNSVQEVLVSMSNEE 61
RV ED+ ++ + L D R+ D+++T + S+N L E LVS+++ E
Sbjct: 419 RVEILEDIFSLLFVTYEELYDERSHHDSDDLDTADEETKSLNTSLTGSMESLVSITSTE 477
>SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13)
Length = 851
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 52 EVLVSMSNEEFKKQYQRNKPSSTDELI 78
+++VSM +++ K + NKPSS D+++
Sbjct: 83 KLVVSMLSKDLYKNHPDNKPSSQDQVL 109
>SB_11815| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.002)
Length = 1725
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 38 KIPSSINIPLNSVQEVLVSMSNEE---FKKQYQRNKPSSTDELI 78
++P + SV E + + S +E F KQYQ++KPS LI
Sbjct: 399 RVPFVVYADFESVTENIDTCSPDEERSFTKQYQKHKPSGYCYLI 442
>SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1087
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 21 EKVLIDVRNPDEVNTTGKIPSSINIPLNSVQEVLVSMSNEEFKKQYQRNKPSS 73
++V+IDV D PS++ P + VQ V + + + ++ + PSS
Sbjct: 862 QEVMIDVTGCDVSAIPVSTPSTVQSPTSRVQHVSTTPNGVDMRRGSPLDSPSS 914
>SB_50621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 58 SNEEFKKQYQRNKPSSTDELI 78
SN F KQ+Q++ SST ELI
Sbjct: 4 SNAWFTKQFQKDPKSSTQELI 24
>SB_36289| Best HMM Match : RNA_pol_N (HMM E-Value=1.9)
Length = 857
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 6 RVVSYEDVLKVIHQPEKVLIDVRN---PDEVNTTGKIPSSINIPLNSVQEVLVSMSNEE 61
RV ED+ ++ + L D R+ D+++T + S+N L E LVS+++ E
Sbjct: 203 RVEILEDIFSLLFVTYEELYDERSHHDSDDLDTADEETKSLNTSLTGSMESLVSITSTE 261
>SB_30701| Best HMM Match : Lipase_GDSL (HMM E-Value=0.022)
Length = 297
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 52 EVLVSMSNEEFKKQYQRNKPSSTDELI 78
+++VSM +++ K + NKPSS D+++
Sbjct: 54 KLVVSMLSKDLYKNHPDNKPSSQDQVL 80
>SB_29903| Best HMM Match : SAP (HMM E-Value=2.2e-11)
Length = 510
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 52 EVLVSMSNEEFKKQYQRNKPSSTDELI 78
+++VSM +++ K + NKPSS D+++
Sbjct: 217 KLVVSMLSKDLYKNHPDNKPSSQDQVL 243
>SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1821
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 52 EVLVSMSNEEFKKQYQRNKPSSTDELI 78
+++VSM +++ K + NKPSS D+++
Sbjct: 217 KLVVSMLSKDLYKNHPDNKPSSQDQVL 243
>SB_5475| Best HMM Match : Endonuclease_7 (HMM E-Value=0.084)
Length = 682
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 38 KIPSSINIPLNSVQEVLVSMSNEE---FKKQYQRNKPSSTDELI 78
++P + SV E + + S +E F KQYQ++KPS LI
Sbjct: 418 RVPFVVYADFESVTENIDTCSPDEGRSFTKQYQKHKPSGYCYLI 461
>SB_44891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 7 VVSYEDVLKVIHQPEKVLIDVRNPDEVNTTGKIP--SSINIP 46
V+ D K I + EKVL DV +VNT G + +++ +P
Sbjct: 74 VLRTTDHSKEILKTEKVLSDVNQVPDVNTVGTVTGLATVEVP 115
>SB_33753| Best HMM Match : bZIP_Maf (HMM E-Value=2.3)
Length = 223
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 52 EVLVSMSNEEFKKQYQRNKPSSTDELI 78
+++VSM ++ K + NKPSS D+++
Sbjct: 54 KLVVSMLTKDLYKNHPDNKPSSQDQVL 80
>SB_23707| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=2.2)
Length = 445
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 54 LVSMSNEEFKKQYQRNKPSSTDELIFYCQSGRRSTEALDIAL 95
L + EE K +Y R K + DEL +C S S L+I +
Sbjct: 224 LEKLLKEEMKGRYDRFKVIAMDELHGHCYSTYLSPRLLNIII 265
>SB_13283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 26.2 bits (55), Expect = 4.7
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 38 KIPSSINIPLNSVQE-VLVSMSNEEFKKQY 66
++P+S N+P+ S E VL + N ++ QY
Sbjct: 103 QVPASTNVPVGSGNEIVLAPVMNRTYRMQY 132
>SB_6203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 26.2 bits (55), Expect = 4.7
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 4 PRRVVSYEDVLKVIHQP-EKVLIDVRNPDEVNTTGKIPSSINIPLNSVQEVLVSMSNEEF 62
P R++ +L+ I Q V N D++ + +PSS+N L V++ + + E
Sbjct: 675 PERLLQSNSILRAITQTYTDCNAKVLNIDDLALSTVLPSSVNANLEGVRQTVFGLRPERK 734
Query: 63 KK 64
K
Sbjct: 735 DK 736
>SB_14870| Best HMM Match : Endonuclease_7 (HMM E-Value=0.24)
Length = 276
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 34 NTTGKIPSSINIPLNSVQEVLVSMSNEE---FKKQYQRNKPSSTDELI 78
N ++P + S +E + + S +E F KQYQ++KPS LI
Sbjct: 46 NRKMRVPFVVYADFESFKENIDTCSPDESRSFTKQYQKHKPSGFCYLI 93
>SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 25.4 bits (53), Expect = 8.3
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 19 QPEKVLIDVRNPDEVNTTGKIPSSINIPLNSVQEVLVSMSNEEFKKQYQRN 69
QPE V + + + V + PSS+ + LN + + M EE KQ + N
Sbjct: 7 QPELVDVSIVKLETVIAVTEPPSSLGMELN-IAAIAQDMQWEEEAKQLESN 56
>SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19)
Length = 1199
Score = 25.4 bits (53), Expect = 8.3
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 1 MVDPRRVVSYEDVLKVIHQPEKVLIDVRNPDEVNTTGKIPSSINIPLNSVQEVLVSMSNE 60
+++ + SYED+LK I + K+ R D G ++ + Q ++ E
Sbjct: 263 LLNSKTTKSYEDILKDISEMMKLKSHTRVKDLFTKDGTKVGGMSQLFHGPQTYFAVVAPE 322
Query: 61 EFKKQYQRNKPSSTDELIFYCQS 83
K+ N S + E + QS
Sbjct: 323 TVPKRNLSNPSSQSSEALSPSQS 345
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.131 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,325,613
Number of Sequences: 59808
Number of extensions: 120148
Number of successful extensions: 377
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 350
Number of HSP's gapped (non-prelim): 36
length of query: 101
length of database: 16,821,457
effective HSP length: 71
effective length of query: 30
effective length of database: 12,575,089
effective search space: 377252670
effective search space used: 377252670
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 53 (25.4 bits)
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