GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002406-TA|BGIBMGA002406-PA|IPR012336|Thioredoxin-like
fold, IPR000866|Alkyl hydroperoxide reductase/ Thiol specific
antioxidant/ Mal allergen
         (194 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   4.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   6.5  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 167 PAGWKPGQDTIIPNPSEKKKYFE 189
           P  WK  +    P+ + KK+YFE
Sbjct: 100 PDYWKALEAKYDPDGTYKKRYFE 122


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 27  FKGKYLVFFFYPL 39
           F G  L+FF +PL
Sbjct: 238 FLGSILIFFIFPL 250


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.139    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,827
Number of Sequences: 317
Number of extensions: 2087
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 194
length of database: 114,650
effective HSP length: 54
effective length of query: 140
effective length of database: 97,532
effective search space: 13654480
effective search space used: 13654480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)