GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002405-TA|BGIBMGA002405-PA|IPR001971|Ribosomal protein
S11
         (151 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M13934-2|AAB59505.1|  151|Homo sapiens ribosomal protein S14 pro...   200   2e-51
BC091474-1|AAH91474.1|  151|Homo sapiens ribosomal protein S14 p...   200   2e-51
BC020515-1|AAH20515.1|  151|Homo sapiens ribosomal protein S14 p...   200   2e-51
BC006784-1|AAH06784.1|  151|Homo sapiens ribosomal protein S14 p...   200   2e-51
BC003401-1|AAH03401.1|  151|Homo sapiens ribosomal protein S14 p...   200   2e-51
BC001126-1|AAH01126.1|  151|Homo sapiens ribosomal protein S14 p...   200   2e-51
BC072682-1|AAH72682.1|  170|Homo sapiens similar to ribosomal pr...   188   5e-48

>M13934-2|AAB59505.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  200 bits (488), Expect = 2e-51
 Identities = 99/140 (70%), Positives = 106/140 (75%)

Query: 1   MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 61  KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 120
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120

Query: 121 XXXMKIGRIEDVTPVPSDST 140
              MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140


>BC091474-1|AAH91474.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  200 bits (488), Expect = 2e-51
 Identities = 99/140 (70%), Positives = 106/140 (75%)

Query: 1   MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 61  KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 120
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120

Query: 121 XXXMKIGRIEDVTPVPSDST 140
              MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140


>BC020515-1|AAH20515.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  200 bits (488), Expect = 2e-51
 Identities = 99/140 (70%), Positives = 106/140 (75%)

Query: 1   MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 61  KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 120
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120

Query: 121 XXXMKIGRIEDVTPVPSDST 140
              MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140


>BC006784-1|AAH06784.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  200 bits (488), Expect = 2e-51
 Identities = 99/140 (70%), Positives = 106/140 (75%)

Query: 1   MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 61  KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 120
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120

Query: 121 XXXMKIGRIEDVTPVPSDST 140
              MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140


>BC003401-1|AAH03401.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  200 bits (488), Expect = 2e-51
 Identities = 99/140 (70%), Positives = 106/140 (75%)

Query: 1   MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 61  KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 120
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120

Query: 121 XXXMKIGRIEDVTPVPSDST 140
              MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140


>BC001126-1|AAH01126.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  200 bits (488), Expect = 2e-51
 Identities = 99/140 (70%), Positives = 106/140 (75%)

Query: 1   MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 61  KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 120
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120

Query: 121 XXXMKIGRIEDVTPVPSDST 140
              MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140


>BC072682-1|AAH72682.1|  170|Homo sapiens similar to ribosomal
           protein S14 protein.
          Length = 170

 Score =  188 bits (459), Expect = 5e-48
 Identities = 93/140 (66%), Positives = 101/140 (72%)

Query: 1   MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
           MAP K K  KEE  + LGPQ   GE VFGV HIFASFNDTFVHVTDLSG++TI RVTGGM
Sbjct: 1   MAPGKGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRVTGGM 60

Query: 61  KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 120
           KVKADRDE+SPYAAML  QDVA++CK LGI ALHI+LRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLTTQDVAQRCKELGIIALHIQLRATGGNRTKTLGPGAQSALRALA 120

Query: 121 XXXMKIGRIEDVTPVPSDST 140
              MKIGRIEDVTP+PSDST
Sbjct: 121 CSGMKIGRIEDVTPIPSDST 140


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.318    0.131    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,574,554
Number of Sequences: 224733
Number of extensions: 386490
Number of successful extensions: 769
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 762
Number of HSP's gapped (non-prelim): 7
length of query: 151
length of database: 73,234,838
effective HSP length: 84
effective length of query: 67
effective length of database: 54,357,266
effective search space: 3641936822
effective search space used: 3641936822
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)