GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002404-TA|BGIBMGA002404-PA|IPR000834|Peptidase M14,
carboxypeptidase A
         (1218 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    27   0.59 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   2.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    25   2.4  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    24   5.5  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 27.5 bits (58), Expect = 0.59
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 475 QSPDDIYYYRECLIHSLEGRR-VDLLTVSSYHGISTDREEKLT 516
           +SP+ IY Y +  +  LEGRR VD   VSS        E++ +
Sbjct: 6   ESPNGIYLYHDGRVKLLEGRRVVDCDDVSSVSQSEAGDEDRFS 48


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 49  CQIILPIFGFLFMLVGCVLTAASY 72
           C  IL IF ++ M++ CV T A+Y
Sbjct: 320 CLNILSIFTYVPMILYCVYTTATY 343


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory
          receptor candidate 24 protein.
          Length = 384

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 49 CQIILPIFGFLFMLVGCVLTAASY 72
          C  IL IF ++ M++ CV T A+Y
Sbjct: 45 CLNILSIFTYVPMILYCVYTTATY 68


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 631 EKEDSFEEGNLSMRSIQNVNETSEPLETKKKKSLSP 666
           +KED   E  LS R   + N T +  +T  ++SLSP
Sbjct: 22  KKEDEEVEHRLSDRDDDDENITVDDDDTDGRESLSP 57


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.133    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,318
Number of Sequences: 317
Number of extensions: 10217
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 4
length of query: 1218
length of database: 114,650
effective HSP length: 65
effective length of query: 1153
effective length of database: 94,045
effective search space: 108433885
effective search space used: 108433885
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)