Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002404-TA|BGIBMGA002404-PA|IPR000834|Peptidase M14,
carboxypeptidase A
(1218 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42097| Best HMM Match : DUF1605 (HMM E-Value=3e-15) 147 5e-35
SB_11736| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 6e-21
SB_39935| Best HMM Match : Peptidase_M14 (HMM E-Value=1.4e-15) 79 2e-14
SB_47153| Best HMM Match : CCG (HMM E-Value=3.4) 46 2e-04
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.016
SB_55054| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.066
SB_34041| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.20
SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6) 36 0.26
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 36 0.26
SB_645| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.61
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.1
SB_10768| Best HMM Match : Collagen (HMM E-Value=1.5) 33 1.4
SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092) 33 1.4
SB_34225| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.9
SB_32530| Best HMM Match : PSK_trans_fac (HMM E-Value=1.6) 33 1.9
SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058) 33 1.9
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 32 3.3
SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013) 32 3.3
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 32 3.3
SB_51990| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 31 4.3
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.3
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 31 4.3
SB_13503| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.3
SB_43816| Best HMM Match : DUF755 (HMM E-Value=6.3) 31 5.7
SB_25218| Best HMM Match : zf-AD (HMM E-Value=0.094) 31 5.7
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.7
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 31 5.7
SB_9294| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.7
SB_49160| Best HMM Match : IBR (HMM E-Value=2.5e-15) 30 10.0
SB_25361| Best HMM Match : Cadherin (HMM E-Value=0) 30 10.0
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 10.0
SB_27468| Best HMM Match : Peptidase_C48 (HMM E-Value=0.0026) 30 10.0
SB_17878| Best HMM Match : Drf_FH1 (HMM E-Value=0.022) 30 10.0
>SB_42097| Best HMM Match : DUF1605 (HMM E-Value=3e-15)
Length = 889
Score = 147 bits (356), Expect = 5e-35
Identities = 65/98 (66%), Positives = 79/98 (80%)
Query: 530 PNKKVVFISARVHPGETPSSFVFNGFLNLLLTRNDPVAIQLRKLYVFKMIPFLNPDGVAR 589
P +V F+SARVHPGETPSSFVF GFL+ LL +DP A LR Y+FKMIP LNPDGV R
Sbjct: 348 PTFEVFFLSARVHPGETPSSFVFEGFLDFLLRTDDPRAAALRDQYIFKMIPMLNPDGVKR 407
Query: 590 GHYRTDTRGVNLNRVYLNPSLSYHPTVYASRALIRYYH 627
GHYRTD RGVNLNRVYL+P + HP+++A+R++I Y+H
Sbjct: 408 GHYRTDPRGVNLNRVYLDPDPTLHPSIFAARSVILYHH 445
Score = 107 bits (258), Expect = 4e-23
Identities = 53/123 (43%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 326 DEGKAPGINHKTNAPETPDYEFNIWTRPDCAGTEFENGNRTWFYFGVQATEQXXXXXXXX 385
DE N+ + P PDYEFN WT PD GTE+EN NRTWFYFGV+
Sbjct: 256 DESSDKEDNNSASFP-VPDYEFNAWTWPDAVGTEYENLNRTWFYFGVKGGVPGRVLKINM 314
Query: 386 XXXXKQGKMYNQGMAPVTRTLPGKPQWERIRDRPVHSTDDNTFMLSFKYRTADNLKATTF 445
+QGK+YNQGM+P + +PGK +WERIRDRP F LS + + + F
Sbjct: 315 MNLNRQGKLYNQGMSPFVKVVPGKGKWERIRDRPTF----EVFFLSARVHPGETPSSFVF 370
Query: 446 FAF 448
F
Sbjct: 371 EGF 373
Score = 94.3 bits (224), Expect = 5e-19
Identities = 41/99 (41%), Positives = 60/99 (60%)
Query: 844 KEEQVKSGIXXXXXXXXXXXXVSTRSAHKEQESGLYLYIDLHGHASKKGIFMYGNHFEDP 903
K E GI +T + +++E L Y+DLHGHASK+G F+Y N E+
Sbjct: 576 KSESTDGGILTHDSESKICMACTTSPSEEQKEGKLMYYVDLHGHASKRGCFIYANFMENE 635
Query: 904 ESCVECMLLPRIMSLNNLHFHFSSCNFTEKNMYLKDRRD 942
E+ V +L P+++S+N+ +F F+ C FTEKNMY KD+RD
Sbjct: 636 ENYVNTILYPKLVSMNSANFDFTGCVFTEKNMYSKDKRD 674
>SB_11736| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 100 bits (240), Expect = 6e-21
Identities = 87/299 (29%), Positives = 131/299 (43%), Gaps = 44/299 (14%)
Query: 339 APETPDYEFNIWTRPDCAGTEFENGNRTWFYFGVQATEQXXXXXXXXXXXXKQGKMYNQG 398
A +T DYE+ +W R D + + + WFYF V+ T K G +YN G
Sbjct: 70 AIKTGDYEYQLWMRTDL----YTSKHTQWFYFRVRNTRAGATYKFTIMNFIKSGSLYNDG 125
Query: 399 MAPVT----RTLPGKPQWERIRDR-PVHSTD---DNTFMLSFKYRTADNLKA-----TTF 445
M P+ K W R + T+ D+T + Y + T +
Sbjct: 126 MRPLAYSEVNASKNKIGWLRTGSNVKYYKTEIRRDDTTKDRYYYALTWTCQFQYSNDTCY 185
Query: 446 FAFTYPFSFAELQIALNSIDLKMLPLPPPQSPDDIYYYRECLIHSLEGRRVDLLTVSSYH 505
FA YP+++++LQ L I P +S + L +L G V +LTV++
Sbjct: 186 FAHCYPYTYSDLQEYLQGIRND-----PVKSR---ICKQRVLCRTLAGNFVYILTVTN-- 235
Query: 506 GISTDREEKLTNLFPENQERPFKFPNKKVVFISARVHPGETPSSFVFNGFLNLLLTRNDP 565
RP K+ V ++ARVHPGET SS++ G L+ L T N
Sbjct: 236 ----------------PSRRPSDAEAKRAVVVTARVHPGETNSSWMMKGLLDFL-TSNSA 278
Query: 566 VAIQLRKLYVFKMIPFLNPDGVARGHYRTDTRGVNLNRVYLNPSLSYHPTVYASRALIR 624
A LR ++FK++P +NPDGV G+YR G +LNR Y P+++ R +I+
Sbjct: 279 DAKLLRDTFIFKIVPMINPDGVIVGNYRCSLAGRDLNRNYKTMLKDSFPSIWHVRNMIK 337
Score = 34.3 bits (75), Expect = 0.61
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 874 QESGLYLYIDLHGHASKKGIFMYG-NHFEDPESCVECMLLPRIMSLN 919
+E + +Y D HGH+ K+ +FMYG + +P + + P +M+ N
Sbjct: 341 EEREITVYCDFHGHSRKQNVFMYGCENRSNPLKRLRERVFPTMMAKN 387
>SB_39935| Best HMM Match : Peptidase_M14 (HMM E-Value=1.4e-15)
Length = 364
Score = 79.4 bits (187), Expect = 2e-14
Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Query: 530 PNKKVVF--ISARVHPGETPSSFVFNGFLNLLLTRNDPVAIQLRKLYVFKMIPFLNPDGV 587
P ++V+F ++ ETPSS+V G ++ +++ N PVA LR+ VFK+IP LNPDGV
Sbjct: 98 PYQRVIFNIVNFSKTXSETPSSYVCQGLIDFIIS-NHPVAKVLREYLVFKVIPMLNPDGV 156
Query: 588 ARGHYRTDTRGVNLNRVYLNPSLSYHPTVYASRALI 623
G+YR G +LNR + PS HPT+ AS+ L+
Sbjct: 157 VLGNYRCSLMGFDLNRHWHEPSPWAHPTLVASKNLL 192
Score = 40.3 bits (90), Expect = 0.009
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 878 LYLYIDLHGHASKKGIFMYGNHFEDPESCVECMLLPRIMSLNNLHFHFSSCNFTEKNMYL 937
L YID+H H++ FMYGN +++ E + P+++ N F S+ +F
Sbjct: 203 LDFYIDIHAHSTLMNGFMYGNIYDEEERYERQAVFPKLLCANADDFSMSNTSF------- 255
Query: 938 KDRRDGMSREGSGRVAVLKATG-LVRSYTLECNYNTGRLVNVLPPTTRD 985
RD M + G+GR + + YTLE ++ + + P T D
Sbjct: 256 --NRDAM-KAGTGRRFLGSSLDPETHCYTLEVSFFSYNTNSTTSPYTED 301
>SB_47153| Best HMM Match : CCG (HMM E-Value=3.4)
Length = 328
Score = 45.6 bits (103), Expect = 2e-04
Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 30/183 (16%)
Query: 339 APETPDYEFNIWTRPDCAGTEFENGNRTWFYFGVQATEQXXXXXXXXXXXXKQGKMYNQG 398
A + +YE+++ PD + WFYF V E K +N G
Sbjct: 144 AIQVREYEYDLILNPDINCRH----HHQWFYFEVSNMEADVPYRFNIINCEKINSQFNFG 199
Query: 399 MAPVTRTL-----PGKPQWER-------IRDRPVHSTDDNTFMLSFKYRTA------DNL 440
M PV ++ G+P W R R+ S D S Y TA +
Sbjct: 200 MQPVLYSMQEAVVEGRPCWARTGANVCYYRNYFSRSQDLGGGQKSKTYFTATFTVTFPHA 259
Query: 441 KATTFFAFTYPFSFAELQIALNSIDLKMLPLPPPQSPDDIYYYRECLIHSLEGRRVDLLT 500
+ A+ YP++++ LQ L +I+ + D+YY R L HSL G D++T
Sbjct: 260 DDVCYLAYHYPYTYSMLQEHLANIESSI--------DSDVYYRRSTLCHSLAGNACDVIT 311
Query: 501 VSS 503
++S
Sbjct: 312 ITS 314
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 39.5 bits (88), Expect = 0.016
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 12/158 (7%)
Query: 1019 RLRPKASSPPRAPLYARAKTKGTDERKENAYVAARTDS---ERRRSPPVLAQRSGHDIIN 1075
R + ++SS R+ Y+R++++ D RK + R S ERRRSPP R +
Sbjct: 616 RSQSRSSSRSRSSSYSRSRSRSPDRRKRSYSPPPRRRSPFRERRRSPPRRTSRWSSQSPD 675
Query: 1076 VNVKFVKKNEPVKSTSRTRYLAENEPKPKTLSTKRRNILAIRK---PNSSKTQVGGVV-- 1130
K+ P +S SR++ + K K+ + + + +K P K +G
Sbjct: 676 RRSPARIKSSPARSRSRSQSASPRHSKSKSPALSKVQVKTEKKTPSPPPIKKTIGSASPP 735
Query: 1131 ----KNKVARRPTDESDGSRPSMLTSKRSFARSIRPKQ 1164
+++ +R +S +PS+ S + PK+
Sbjct: 736 PSHHRSEYKKRDVQDSPVRQPSLSPSPSPERKKEDPKE 773
>SB_55054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 37.5 bits (83), Expect = 0.066
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 531 NKKVVFISARVHPGETPSSFVFNGFLNLLLTRNDPVA 567
+K V ISARVHPGET +S++ G L+ L+ ND VA
Sbjct: 5 DKLGVVISARVHPGETNASWMMKGLLD-YLSSNDKVA 40
>SB_34041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 951
Score = 35.9 bits (79), Expect = 0.20
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 633 EDSFEEGNLSMRSIQN---VNETSEPLETKKKKSLSPYKIGEYGKREKSSKSVGCNKSST 689
E++ ++G ++S Q VN T + K +P K GK++ + V N +
Sbjct: 689 ENTVDKGKTKIKSKQQGWFVNSTDDSTGGIIVKDSTPRKASIPGKQKSAGDEVSTNVRNI 748
Query: 690 SIKQANAS----KDKNAIKNTNETGQLADQVYDMKLQEMPSQTSDASSKAS 736
S+ +N S K N NTN +G L++++ D K ++ +S K S
Sbjct: 749 SVNGSNRSTANEKTSNGTSNTN-SGSLSEKIEDSKTKKGDISQICSSGKTS 798
>SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6)
Length = 159
Score = 35.5 bits (78), Expect = 0.26
Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Query: 631 EKEDSFEEGNLSMRSIQNVNETSEPLETKKKKSLSPYKIGEYGKREKSSKSVGCNKSSTS 690
EKE+ + + + + E E +K+K K E GK+E++ K K + +
Sbjct: 44 EKEEEKWKQEETEKEAETEKEAETEKEAEKEKKKKTEKEEEKGKQEETGKEAETEKQAET 103
Query: 691 IKQANASKDKNAIK--NTNETGQLADQVYDMKLQEMPSQTSDASSKASDCVEPD 742
KQ K+ K T + G+ + ++ + ++ SD S EP+
Sbjct: 104 EKQEETEKEGGTEKEGETEKEGETEKEAENIIFLPIANEKSDVSGDGFFIYEPE 157
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 35.5 bits (78), Expect = 0.26
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 1088 KSTSRTRYLAENEPKPKTLSTKRRNILAIRKPNSSKTQVGGVVKNKVARRPTDESDGSRP 1147
K++ +T + E K KT S K + L + ++KT K +P D+ +RP
Sbjct: 168 KTSRKTSHKTETSRKTKT-SLKTKTSLKTKTSRNTKTSRKTKTSRKTKTKPQDQDQAARP 226
Query: 1148 SMLTSKRSFAR---SIRPKQ 1164
S R AR + RP+Q
Sbjct: 227 SQAARPRQAARPRQASRPRQ 246
>SB_645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 34.3 bits (75), Expect = 0.61
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 1013 YQLTMSRLRPKASSPPRAPLYARAKTKGTDERKENAYVAARTDSERRRSPPVLAQRSGHD 1072
Y ++ + R K+SSP R AR+++ G + + RT + SPP RS
Sbjct: 120 YHISYFQQRSKSSSPSRR---ARSRSPGRRRSRSRSPARRRTAARSSPSPPKRQGRSPGR 176
Query: 1073 IINVNVKFVKKNEPVKSTSRTRYLAENE-PKPKTLSTKR 1110
NV + + P +S R+R E + + KT S K+
Sbjct: 177 PSNVTAEKNEPETPKRSPVRSRKAKEEKVSEEKTPSPKK 215
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 33.5 bits (73), Expect = 1.1
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 1082 KKNEPVKSTSRTRYLAENE-----PKPKTLSTKRRNILAIRKPNSSKTQVGGVVKNKVAR 1136
+ +EPV++ S AE E P+PKT TK + +K NSSK G + K A+
Sbjct: 126 ESDEPVETESEEESSAEEEEDEYKPEPKTKRTKASD----KKTNSSKKTAGRPGRRKSAK 181
Query: 1137 RPTDESDG 1144
+ +SDG
Sbjct: 182 VISSDSDG 189
>SB_10768| Best HMM Match : Collagen (HMM E-Value=1.5)
Length = 274
Score = 33.1 bits (72), Expect = 1.4
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 880 LYIDLHGHASKKGIFMYG 897
+Y D HGH+ KK +FMYG
Sbjct: 1 VYCDFHGHSRKKNVFMYG 18
Score = 33.1 bits (72), Expect = 1.4
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 902 DPESCVECM---LLPRIMSLNNLHFHFSSCNFTEKNMYLKDRRDGMSREGSGRVAVLKAT 958
DP VE + LPR++ F SC+F + S+E + RV V +
Sbjct: 55 DPNETVEDVGYRTLPRVLHNIAPAFSLGSCSFVVEP----------SKESTARVVVWREL 104
Query: 959 GLVRSYTLECNYN 971
G+VRSYT+E Y+
Sbjct: 105 GVVRSYTMESTYS 117
>SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092)
Length = 1146
Score = 33.1 bits (72), Expect = 1.4
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 610 LSYHPTVYAS-RALIRYYHFGCEKEDSFEEGNLSMR--SIQNVNETSEPLETKKKKSLSP 666
LS+H +Y R +I EKE E L ++ ++ N T + K +K+L+
Sbjct: 213 LSHHQGIYQLLRDVINKRAVEFEKEVLLETEKLRVKVQELEEENRTLQESSLKLQKALAT 272
Query: 667 Y---KIGEYGKREKSSKSVGCNKSSTSIKQANASKDKNAIKNTNETGQLADQVYDMKLQE 723
+ K + + S + G +K STS K A+ D+N+ + N++ Q V E
Sbjct: 273 FIKNKEKTLSRHQSSLRHPGSSKPSTSSKHYPATIDQNS-PSKNKSVQAITPVPSTSPSE 331
Query: 724 MPSQTSDASSKASDCVEP 741
++ +++S+ A P
Sbjct: 332 PLTKVAESSTAADHPCNP 349
>SB_34225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 32.7 bits (71), Expect = 1.9
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 880 LYIDLHGHASKKGIFMYG 897
+Y DLHGH+ K +FMYG
Sbjct: 529 IYCDLHGHSRKPNVFMYG 546
Score = 30.3 bits (65), Expect = 10.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 880 LYIDLHGHASKKGIFMYG 897
+Y DLHGH+ K + MYG
Sbjct: 491 IYCDLHGHSRKPNVIMYG 508
>SB_32530| Best HMM Match : PSK_trans_fac (HMM E-Value=1.6)
Length = 237
Score = 32.7 bits (71), Expect = 1.9
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 7/117 (5%)
Query: 687 SSTSIKQANASKDKNAIKNTNE-TGQLADQVY---DMKLQEMPSQTSDASSKASDCVEPD 742
S S + A + ++ AI+ TNE T QLA ++ D + + + SK V +
Sbjct: 101 SQASAQTAGPADERPAIRVTNERTHQLAAELQRAGDALCHQYEGRVKEVESKLLQLVTQE 160
Query: 743 PRSLLT---CNVLRTCLGSDVHXXXXXXXXXXXXXXXXXXKDAVYFCANCFKRYVVT 796
+ L C +G D + KDA+ + N F+RYV T
Sbjct: 161 AKDLTYDRFCRAADDLVGKDKNWTNFVFITTVAKRLCRHSKDALRYGKNHFERYVTT 217
>SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058)
Length = 820
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 580 PFLNPDGVARGHYRTDTRGVNLNRVYL--NPSLSYHPTVYASRALIRYYHFGCEKEDSFE 637
P P G + Y T G R YL NP Y+P+ + S A RYYH G + +
Sbjct: 395 PRYYPSGNPQPRYYTS--GNPQPRYYLSGNPQSRYYPS-WKSTAQPRYYHSGNPQSRYYP 451
Query: 638 EGNLSMRSIQNVNETS 653
GNL R + N S
Sbjct: 452 SGNLQSRYYLSGNPQS 467
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 31.9 bits (69), Expect = 3.3
Identities = 32/148 (21%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 1018 SRLRPKASSPPRAPLYARAKTKGTDERKENAYVAARTDSERRRSPPVLAQRSGHDIINVN 1077
S+ + ++ S R+ ++R +++ + K +R++S+ ++ RS N
Sbjct: 288 SQRKSRSRSRNRSRSHSRKRSRSSSRSKSRKKSGSRSNSQSKQKS---RSRS-----RSN 339
Query: 1078 VKFVKKNEPVKSTSRTRYLAENEPKPKTLSTKRR---NILAIRKPNSSKTQVGGVVKNKV 1134
+ KK+ KS SR+R ++++ K K+ ++ R N + +K S K++ + K+K
Sbjct: 340 SQSRKKSSSKKSRSRSRSISQSRKKVKSKKSRSRSHSNSPSRKKARSKKSRSRSLSKSKK 399
Query: 1135 ARRPTDESDGSRPSMLTSKRSFARSIRP 1162
R S ++ + + S +RS+ P
Sbjct: 400 RR---SRSPITKKESNSKRHSHSRSMSP 424
>SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013)
Length = 340
Score = 31.9 bits (69), Expect = 3.3
Identities = 20/87 (22%), Positives = 32/87 (36%)
Query: 655 PLETKKKKSLSPYKIGEYGKREKSSKSVGCNKSSTSIKQANASKDKNAIKNTNETGQLAD 714
P TK+ S P+K + K K +KS KS+ K +K K+T T
Sbjct: 147 PTSTKQPSSSRPFKSTKPTKSTKPTKSTKATKSTKPTKSTKPTKPTKPTKSTKPTKSTKP 206
Query: 715 QVYDMKLQEMPSQTSDASSKASDCVEP 741
+ P+ + + +C P
Sbjct: 207 TKSTKPTESKPTAPTSLPDQRPNCRLP 233
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 31.9 bits (69), Expect = 3.3
Identities = 25/117 (21%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 633 EDSFEEGNLSMRSIQNVNETSEPLETKKKKSLSPYKIGEYGKREKS--SKSVGCNKSSTS 690
+ SFEE +R + +T++ K YK+ +R++S SK+V + +
Sbjct: 500 KSSFEEKVSELRVLSKELKTAQETLKNVSKERDSYKVVHAYRRKESVQSKTVELSNAKAD 559
Query: 691 IKQANAS-----KDKNAIKNTNETGQLADQVYDMKLQEMPSQTSDASSKASDCVEPD 742
I++ N+ K+ ++K E + + D+KLQ++ + A + + D + +
Sbjct: 560 IEEKNSQLQTVYKELKSVKGLQE--KTEKERDDLKLQQVKEEQLQAMASSQDSISKE 614
>SB_51990| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1055
Score = 31.5 bits (68), Expect = 4.3
Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 641 LSMRSIQNVNETSEPLETKKKKSLSPYKIGEYGKREKSSKSVGCNKSSTSIKQANASKDK 700
+ + + N ++T P++ K+S K K K S+ + ++ + S + +++
Sbjct: 491 IELLNANNQSKTPAPIQANTKQSSPKPK-----KHVKISEDISTSERAFSSDSNMSGQEE 545
Query: 701 NAIKNTNETGQLADQVYDMKLQEMPSQTSDASSKASDCVEPDPRSLL 747
+ +N G L D EM +SD + SDC + D +++L
Sbjct: 546 SVFENGPRKGNLKSTRQDTV--EMDYLSSDGGNLGSDCEDEDSQTML 590
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 896 YGNHFE-DPESCVECMLLPRIMSLNNLHFHFSSCNFTEKNMYLKD 939
YGN + DPE CV+ + +P + + ++LH +C TE+ +LKD
Sbjct: 157 YGNFEDIDPELCVKLLSIPSLKNFSSLHCKLKTC--TEQ--WLKD 197
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 56 FGFLFMLVGCVLTAASYRGCGENEEPDHYAARIAFTGNSRVLGPVCIVAGALMTIAGIVL 115
F LF+L GC + A +E +R+ T N + +CIV G + I +
Sbjct: 17 FNLLFLLAGCAIFAIGVWIISSKDEVAGDYSRLTGTINYKTAPILCIVIGIVTVIVAFLA 76
Query: 116 C 116
C
Sbjct: 77 C 77
>SB_13503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 31.5 bits (68), Expect = 4.3
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 908 ECMLLPRIMSLNNLHFHFSSCNFTEKNMYLKDR-RDGMSREGSGRVAVLKATGL 960
+C LLP M+LNNL+ S NF K Y KDR GM + +G VL T +
Sbjct: 415 KCHLLP--MTLNNLN----SLNFIPKKDYTKDRLMSGMLQLSNGTELVLDETAM 462
>SB_43816| Best HMM Match : DUF755 (HMM E-Value=6.3)
Length = 539
Score = 31.1 bits (67), Expect = 5.7
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 652 TSEPLETKKKKSLSPYKIGEYGKREKSSKSVGCNKSSTSIKQANASKDKNAIKNTNETGQ 711
TSE + T K +L ++ + GKR KSS++ ++SS + AN + + +
Sbjct: 118 TSELINTLKSNNLFRFRGKKAGKRSKSSENSLSSESSCFSRYANVASETG-----RNAPR 172
Query: 712 LADQVYDMKLQEMPSQTS 729
LAD+V QE S ++
Sbjct: 173 LADRVQSPLAQEQWSSST 190
>SB_25218| Best HMM Match : zf-AD (HMM E-Value=0.094)
Length = 436
Score = 31.1 bits (67), Expect = 5.7
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 661 KKSLSPYKIGEYGKR-EKSSKSVGCNKSSTSIKQANASKDKNAIKNTNETGQLADQVYDM 719
+K LS KI KR ++ +S CN + +SI NASK + G + D +
Sbjct: 114 RKLLSVSKIAAELKRTDRGPRS--CNHADSSINVNNASKVGEKVLALINRGSVTDYTFKR 171
Query: 720 KLQEMPSQTSDASSKASDCVEPDPRSLL 747
Q + + A + ++ VE DP+ LL
Sbjct: 172 NAQAITFASKLAVNIDNERVEIDPQLLL 199
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 31.1 bits (67), Expect = 5.7
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 891 KGIFMYGNHFEDPESCVECMLLPRIMSLNNLHFHFSSCNFTEKNMYLKDRRD--GMSREG 948
+GI+ YG FE P + + + P + H ++ N T KN Y+ RD ++ G
Sbjct: 76 RGIYAYG--FEKPSAIQQRAIRPCCQEFSPSHVCYNQLNLT-KNHYVLSARDVIAQAQSG 132
Query: 949 SGRVA 953
+G+ A
Sbjct: 133 TGKTA 137
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 31.1 bits (67), Expect = 5.7
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 301 TANANVHKNPDYEHTRPVSVSISIPDEGKAPGINHKTNAPETPDYEFNIWTRPD 354
T N+ K D + ++PV+ + +IP T TP YE + ++PD
Sbjct: 30 TPTVNIQKATDAQASKPVTPTATIPRSADIHSHKSSTLVAATPRYENMLTSKPD 83
>SB_9294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 31.1 bits (67), Expect = 5.7
Identities = 20/72 (27%), Positives = 32/72 (44%)
Query: 684 CNKSSTSIKQANASKDKNAIKNTNETGQLADQVYDMKLQEMPSQTSDASSKASDCVEPDP 743
CN + +SI NASK + G + D + Q + + A + ++ VE DP
Sbjct: 3 CNHADSSINVNNASKVGEKVLALINRGSVTDYTFKRNAQAITFASKLAVNIDNERVEIDP 62
Query: 744 RSLLTCNVLRTC 755
+ LL +L C
Sbjct: 63 QLLLQRLILDIC 74
>SB_49160| Best HMM Match : IBR (HMM E-Value=2.5e-15)
Length = 582
Score = 30.3 bits (65), Expect = 10.0
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 1035 RAKTKGTDERKENAYVAARTDSERRRSPPVLAQ---RSGHDIINVNVKFVKKNEPVKSTS 1091
R K K TD+ +++ Y A SE RSPP+L + R + +F KKN P +
Sbjct: 468 RKKKKLTDDSEDSDYGQAGNVSECNRSPPILRRMPPRGPSKGEQIEAEF-KKNHP---GA 523
Query: 1092 RTRYLAENEPKPKTLSTKRRNIL 1114
+ Y K K L ++ N +
Sbjct: 524 QLHYKNCGRCKQKNLKQQKNNFM 546
>SB_25361| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 4833
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 299 VTTANANVHKNPDYEHTRPVSVSISIPDEGKAPGINHKT 337
+T + V K DYEH S+++S D GK P ++ T
Sbjct: 2976 LTNGSLYVSKPLDYEHQENYSLNVSATDGGKEPKTSYAT 3014
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 30.3 bits (65), Expect = 10.0
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 21/99 (21%)
Query: 1052 ARTDSERRRSPPV-LA--QRSGHDII---NVN------VKFVKKNEPVKSTSRTRYLAEN 1099
++ +S ++ S PV LA +RSG+D+ NV+ V V K + V T+ TRY +N
Sbjct: 574 SKEESMKQWSQPVQLAGYERSGNDVKVYHNVSEDKQGDVTVVTKTKRVV-TNNTRYEIKN 632
Query: 1100 EPKPKTLSTKRRNILAIRKPNSSKTQVGGVVKNKVARRP 1138
+ +P+T++T R + +P K Q+ GV + ++A +P
Sbjct: 633 DHEPETITTVR-----VERP---KIQLHGVKQQRIADKP 663
>SB_27468| Best HMM Match : Peptidase_C48 (HMM E-Value=0.0026)
Length = 766
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Query: 660 KKKSLSPYKIGEYGKREKSSKSVGCNKSSTSIKQANASKDKNAIKNTNETGQLADQVYDM 719
KKKS+ K E K S + + + SKD+ K +++ ++Q D
Sbjct: 381 KKKSMEKTKSQEPDKPVCVLISSSDEEDNQEADKYKVSKDEPQDKEDDDSENSSEQAED- 439
Query: 720 KLQEMPSQTSDASSKASDCVEPDPRSLLTCNV 751
K + P +T D+ D V+P R + N+
Sbjct: 440 KREPDPKKTKDSPKPPPDPVDPFERDSFSANI 471
>SB_17878| Best HMM Match : Drf_FH1 (HMM E-Value=0.022)
Length = 664
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 1081 VKKNEPVKSTSRTRYLAENEPKPKTLSTKRRNILAIRKPNSSKTQVGGVVKNKVARRPTD 1140
+K P+ S + T+ L P+P + R + + +S +VG V+ R +
Sbjct: 543 IKPLPPLSSKAATKTL----PQPPSKDDLRAGVKEMEN-SSEINRVGPAVEQNTCRGILE 597
Query: 1141 ESDGSRPSMLTSKRSFARSIRPKQ 1164
+ GS + TS +SF +S RP++
Sbjct: 598 QKRGSTQAHDTSPKSFNQSPRPRR 621
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,877,112
Number of Sequences: 59808
Number of extensions: 1435100
Number of successful extensions: 3567
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 3527
Number of HSP's gapped (non-prelim): 58
length of query: 1218
length of database: 16,821,457
effective HSP length: 90
effective length of query: 1128
effective length of database: 11,438,737
effective search space: 12902895336
effective search space used: 12902895336
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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