Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002404-TA|BGIBMGA002404-PA|IPR000834|Peptidase M14,
carboxypeptidase A
(1218 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23484-1|AAC46766.2| 459|Caenorhabditis elegans Hypothetical pr... 136 1e-31
AF067618-6|AAC19197.1| 1192|Caenorhabditis elegans Hypothetical ... 104 3e-22
AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical... 38 0.044
AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical... 38 0.044
AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical... 38 0.044
U41108-2|AAQ23121.2| 639|Caenorhabditis elegans Tropomodulin pr... 34 0.54
U41993-1|AAO12433.1| 390|Caenorhabditis elegans Hypothetical pr... 33 1.6
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 32 2.2
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 32 2.2
Z78015-4|CAB01436.2| 149|Caenorhabditis elegans Hypothetical pr... 32 2.9
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 32 2.9
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 32 2.9
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 32 2.9
Z81531-4|CAB04318.1| 285|Caenorhabditis elegans Hypothetical pr... 31 3.8
Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 3.8
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 3.8
Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical pr... 31 3.8
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 31 3.8
Z81539-4|CAB04392.2| 208|Caenorhabditis elegans Hypothetical pr... 31 5.0
Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical pr... 31 5.0
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 31 6.6
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 30 8.8
AL132948-8|CAD31810.1| 426|Caenorhabditis elegans Hypothetical ... 30 8.8
AF125964-7|AAD14750.1| 350|Caenorhabditis elegans Hypothetical ... 30 8.8
>U23484-1|AAC46766.2| 459|Caenorhabditis elegans Hypothetical
protein EEED8.6 protein.
Length = 459
Score = 136 bits (328), Expect = 1e-31
Identities = 88/288 (30%), Positives = 157/288 (54%), Gaps = 47/288 (16%)
Query: 346 EFNIWTRPDCAGTEFENGNRTWFYFGVQATEQXXXXXXXXXXXXKQGKMYNQGMA-PVTR 404
E++++ RPD ++ R WFYF + + KQ ++ G+A PV +
Sbjct: 40 EYDLFIRPDTLNNKY----RVWFYFECKNASENQRAIFNIVNFSKQRTLFEMGIAAPVVK 95
Query: 405 TLPGKPQWERIRDRPVH----STDDNTFMLSFKY--RTADNLKATTFFAFTYPFSFAELQ 458
+ + W RI R ++ S ++ ++LSF + + D ++ FA+ P+++ ++Q
Sbjct: 96 S-NAQNSWARIPSRHIYYYRSSQHNDRWILSFAFIFESPDPVQ----FAYCIPYTYGQMQ 150
Query: 459 IALNSIDLKMLPLPPPQSPDDIYYYRECLIHSLEGRRVDLLTVSSYHGISTDREEKLTNL 518
I LN ++ + P +++R+ L+ +++ RRVDL+T+ +
Sbjct: 151 IWLNELESRKYP----------FFHRDLLVQTVQKRRVDLITIDAT-------------- 186
Query: 519 FPENQERPFKFPNKKVVFISARVHPGETPSSFVFNGFLNLLLTRNDPVAIQLRKLYVFKM 578
P+ + +KK++F++ARVHPGE+PSS V +G + L++++D A +LRK+Y FK+
Sbjct: 187 -PDTFQG-----SKKMIFLTARVHPGESPSSHVMHGIIEFLVSKDDR-AQKLRKVYCFKI 239
Query: 579 IPFLNPDGVARGHYRTDTRGVNLNRVYLNPSLSYHPTVYASRALIRYY 626
IP LNPDGV G+YR G +LNR++ PS HP++YA + L+ Y
Sbjct: 240 IPMLNPDGVFLGNYRCSLMGHDLNRMWRTPSDWAHPSIYAVKNLLTQY 287
Score = 31.9 bits (69), Expect = 2.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 880 LYIDLHGHASKKGIFMYGN 898
+Y+DLH H+ K F+YGN
Sbjct: 297 IYVDLHAHSQKPNCFLYGN 315
>AF067618-6|AAC19197.1| 1192|Caenorhabditis elegans Hypothetical
protein F56H1.5 protein.
Length = 1192
Score = 104 bits (250), Expect = 3e-22
Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 45/277 (16%)
Query: 367 WFYFGVQATEQXXXXXXXXXXXXKQGKMYNQGMAPVTRTLPGKPQ-WERIRD-------- 417
WF+F V + K +Y+QGM PV ++ W R+ +
Sbjct: 803 WFFFQVSNMRKSVKYTFEIVNCLKSTSLYSQGMQPVMYSMMESANGWRRVGENVCYFRNL 862
Query: 418 --------RPVHSTDDNTFMLSFKYR-TADNLKATTFFAFTYPFSFAELQIALNSIDLKM 468
+ V + S ++ T N + A+ YP++++ LNS L M
Sbjct: 863 YINENEEKKNVEEQKKKKYYYSIRFNVTFQNTGDICYIAYHYPYTYS----FLNS-SLSM 917
Query: 469 LPLPPPQSPDDIYYYRECLIHSLEGRRVDLLTVSSYHGISTDREEKLTNLFPENQERPFK 528
L + +++Y + + HSL G + +LT+++ P + +
Sbjct: 918 LK---KRKQENVYCREDVIGHSLAGNPIKMLTITT----------------PASAA---E 955
Query: 529 FPNKKVVFISARVHPGETPSSFVFNGFLNLLLTRNDPVAIQLRKLYVFKMIPFLNPDGVA 588
++V+ +SARVHPGET +S++ G L LL R +LR+ ++FK++P +NPDGV
Sbjct: 956 IAAREVIVLSARVHPGETNASWIMQGILENLLCRQSNEMYRLRESFIFKIVPMINPDGVT 1015
Query: 589 RGHYRTDTRGVNLNRVYLNPSLSYHPTVYASRALIRY 625
G +R G++LNR++ P+ + HP V+A++A+I+Y
Sbjct: 1016 NGSHRCSLAGIDLNRMWDRPNEALHPEVFATKAIIQY 1052
Score = 37.5 bits (83), Expect = 0.058
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 879 YLYIDLHGHASKKGIFMYGNHFEDPESCVECMLLPRIMSLNNLHFHF-SSCNFTEKNMY- 936
+ Y+D+HGH+ K F+YGN+ + + + + LH + T + +
Sbjct: 1062 FAYVDIHGHSKKWDYFVYGNNASESWRADDVLDVGAAQLEEELHLALPKALEATCPSRFN 1121
Query: 937 LKDRRDGMSR--EGSGRVAVLKATGLVRSYTLE---CNYNTGR 974
+ R ++R E S RV V + G+ +YTLE C ++ G+
Sbjct: 1122 ASECRFNITRAKESSARVNVWRQFGVSTAYTLESTFCGFHKGQ 1164
>AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical
protein Y47G6A.19b protein.
Length = 438
Score = 37.9 bits (84), Expect = 0.044
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 530 PNKKVVFISARVHPGETPSSFVFNGFLNLLLT--RNDPVAIQLRKLYVFKMIPFLNPDGV 587
P+KK+V I A +H E + + F+NL++ DP V +IP LNPDG
Sbjct: 141 PDKKIVVIDAGIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGY 200
Query: 588 ARGHYRTD 595
+ RTD
Sbjct: 201 E--YTRTD 206
>AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.19a protein.
Length = 468
Score = 37.9 bits (84), Expect = 0.044
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 530 PNKKVVFISARVHPGETPSSFVFNGFLNLLLT--RNDPVAIQLRKLYVFKMIPFLNPDGV 587
P+KK+V I A +H E + + F+NL++ DP V +IP LNPDG
Sbjct: 141 PDKKIVVIDAGIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGY 200
Query: 588 ARGHYRTD 595
+ RTD
Sbjct: 201 E--YTRTD 206
>AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical
protein Y47G6A.19c protein.
Length = 464
Score = 37.9 bits (84), Expect = 0.044
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 530 PNKKVVFISARVHPGETPSSFVFNGFLNLLLT--RNDPVAIQLRKLYVFKMIPFLNPDGV 587
P+KK+V I A +H E + + F+NL++ DP V +IP LNPDG
Sbjct: 141 PDKKIVVIDAGIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGY 200
Query: 588 ARGHYRTD 595
+ RTD
Sbjct: 201 E--YTRTD 206
>U41108-2|AAQ23121.2| 639|Caenorhabditis elegans Tropomodulin protein
2, isoform b protein.
Length = 639
Score = 34.3 bits (75), Expect = 0.54
Identities = 24/124 (19%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Query: 1030 APLYARAKTKGTDERKENAYVAARTDSERRRSPPVLAQRSGHDIINVN-VKFVKKNEPVK 1088
AP A+ K G R + + A+ E+R + + ++++ ++ ++KN+ +K
Sbjct: 442 APSTAKPKLDGAPIRAKRPPITAKNIWEQRMAKIEKKEEKKKPLLSIQKIREMEKNDVIK 501
Query: 1089 STS--RTRYLAENEPKPKTLSTKRRNILAIRKPNSSKTQVGGVVKNKVARRPTDESDGSR 1146
R L + E +PK L+ + R + K + V+ +A++P + +
Sbjct: 502 KEEDDRLEQLLKKEKEPKKLNNEHRKLFENGNVAQKKPEPRRHVQKLIAKKPNSILNQTE 561
Query: 1147 PSML 1150
P+ +
Sbjct: 562 PTKI 565
>U41993-1|AAO12433.1| 390|Caenorhabditis elegans Hypothetical
protein F44A2.5b protein.
Length = 390
Score = 32.7 bits (71), Expect = 1.6
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 647 QNVNETSEPLETKK---KKSLSPYKIGEYGKREKSSKSVGCNKSSTSIKQANASKDKNAI 703
Q + E P TKK + ++ Y+ SS + SST K A K ++
Sbjct: 9 QLIGELKAPATTKKPTNRPAMQIYRPPGLRSDGSSSTTAVTTTSSTKPKPAAGQKLSSSE 68
Query: 704 KNTNETGQLADQVYDMKLQEMPSQTSDASSKASDCVEPDPR 744
+TN Q+ + + K S +S ASS+AS+ V D R
Sbjct: 69 CDTNVNSQILKEENNNKKDCGESTSSRASSRASNHVSSDDR 109
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 532 KKVVFISARVHPGETPSSFVFNGFLNLLLTR-NDPVAIQLRKLYVFKMIPFLNPDG 586
KK+ +I +H E + F++ L +R N+P +L F ++P LNPDG
Sbjct: 175 KKIFWIDGGIHAREWAAPHTALFFIHQLTSRANEPGIKKLLNEITFVVVPCLNPDG 230
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 532 KKVVFISARVHPGETPSSFVFNGFLNLLLTR-NDPVAIQLRKLYVFKMIPFLNPDG 586
KK+ +I +H E + F++ L +R N+P +L F ++P LNPDG
Sbjct: 175 KKIFWIDGGIHAREWAAPHTALFFIHQLTSRANEPGIKKLLNEITFVVVPCLNPDG 230
>Z78015-4|CAB01436.2| 149|Caenorhabditis elegans Hypothetical
protein R02D5.7 protein.
Length = 149
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 652 TSEPLETKKKKSLSPYKIGEYGK-REKSSKSVGCNKSSTSIKQANASKDKNAIKNTNE 708
T P KK+++ P K + K +EKS KS KSS S K +D+N +N +
Sbjct: 75 TPGPAAPKKEEAPPPEKPKKEEKPKEKSKKSAKSKKSSKSKKDKKDGEDENGYENCQD 132
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform e protein.
Length = 2702
Score = 31.9 bits (69), Expect = 2.9
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 6/123 (4%)
Query: 616 VYASRALIRYYHFG-CEKEDSFEEGNLSMRSIQNVNETSEPLETKKKKSLSPYKIGEYGK 674
+ R+L + FG E +F G L + + ET+K S
Sbjct: 289 ILEERSLSTVHEFGESEASTTFGVGKLVTKKPEKEEVGRSFSETRKLSQFSDITAISETT 348
Query: 675 REKSSKSVG---CNKSSTSIKQANASKDKNAIKNTNETGQLADQVYDMKLQEMPSQTSDA 731
+ S+ + C++S T I N KD +K T E ADQV ++ +E+ Q++D
Sbjct: 349 TDMDSEILRLPECDQSVTLISHKNQQKDVKDLKATVE--NTADQVTLLEKREVREQSADV 406
Query: 732 SSK 734
K
Sbjct: 407 KKK 409
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 31.9 bits (69), Expect = 2.9
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 6/123 (4%)
Query: 616 VYASRALIRYYHFG-CEKEDSFEEGNLSMRSIQNVNETSEPLETKKKKSLSPYKIGEYGK 674
+ R+L + FG E +F G L + + ET+K S
Sbjct: 5135 ILEERSLSTVHEFGESEASTTFGVGKLVTKKPEKEEVGRSFSETRKLSQFSDITAISETT 5194
Query: 675 REKSSKSVG---CNKSSTSIKQANASKDKNAIKNTNETGQLADQVYDMKLQEMPSQTSDA 731
+ S+ + C++S T I N KD +K T E ADQV ++ +E+ Q++D
Sbjct: 5195 TDMDSEILRLPECDQSVTLISHKNQQKDVKDLKATVE--NTADQVTLLEKREVREQSADV 5252
Query: 732 SSK 734
K
Sbjct: 5253 KKK 5255
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 632 KEDSFEEGNLSMRSIQNVNETSEPLETKKKKSLSPYKIGEYGKREKSSKSVGCNKSSTSI 691
KED +E MR+++NV+E ++ ++S K + K+ K SK +
Sbjct: 255 KEDRRKEKKREMRAVRNVSEDDSSTSSESEESDFEQKKKKKVKKSKKSKKDKKKEKKEKK 314
Query: 692 KQANASKDK 700
K A+K+K
Sbjct: 315 KSKKANKEK 323
>Z81531-4|CAB04318.1| 285|Caenorhabditis elegans Hypothetical
protein F36D3.4 protein.
Length = 285
Score = 31.5 bits (68), Expect = 3.8
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 650 NETSEPLETKKKKSLSPYKIGEYGKREKSSKSVGCNKSSTSIKQANASKDKNAIKNTNET 709
++ S E KK + S K + + ++SSKS C+KSS K+ + +K KN N T
Sbjct: 78 SKKSSKSEKKKLRRESKDKSSKSKRSKRSSKSKKCDKSS---KKCDLNKAKNLCPPINST 134
Query: 710 GQLADQVYDMKLQEMPSQTSDASSKASDCVEPDPR 744
V D+ ++ + S+ SKA V P+
Sbjct: 135 -----DVSDVSIKSNSGEKSE-KSKALKLVPNQPK 163
>Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 3.8
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 645 SIQNVNETSEPLETKKKKSLSPYKIGEYGKREKSSKSVGCNKSSTSIKQANASKDKNAIK 704
S V T+ + + ++S E ++S + SSTS + + D I
Sbjct: 873 STSEVTSTTSTGSSSESSAISTTSGIESTSTLEASTTDASQDSSTSTSDSGTTSDSTTID 932
Query: 705 NTNETGQLADQVYDMKLQEMPSQTSDAS-SKASDCVEPD 742
++N T +D L + PS +S AS S + V+PD
Sbjct: 933 SSNSTPSTSD---SSGLSQTPSDSSSASDSMRTTTVDPD 968
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 3.8
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 645 SIQNVNETSEPLETKKKKSLSPYKIGEYGKREKSSKSVGCNKSSTSIKQANASKDKNAIK 704
S V T+ + + ++S E ++S + SSTS + + D I
Sbjct: 873 STSEVTSTTSTGSSSESSAISTTSGIESTSTLEASTTDASQDSSTSTSDSGTTSDSTTID 932
Query: 705 NTNETGQLADQVYDMKLQEMPSQTSDAS-SKASDCVEPD 742
++N T +D L + PS +S AS S + V+PD
Sbjct: 933 SSNSTPSTSD---SSGLSQTPSDSSSASDSMRTTTVDPD 968
>Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical
protein F56F3.1 protein.
Length = 761
Score = 31.5 bits (68), Expect = 3.8
Identities = 22/84 (26%), Positives = 36/84 (42%)
Query: 629 GCEKEDSFEEGNLSMRSIQNVNETSEPLETKKKKSLSPYKIGEYGKREKSSKSVGCNKSS 688
G EK + +G +M + + EP + K KK+ K E K + + VG SS
Sbjct: 194 GSEKLPEWADGPTTMDDMIELRGFDEPKKVKNKKNPKEKKEKEAVKAPEPVECVGSRPSS 253
Query: 689 TSIKQANASKDKNAIKNTNETGQL 712
T +K + D +++ G L
Sbjct: 254 TGLKTSEPIDDPAIAYSSSGGGAL 277
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 31.5 bits (68), Expect = 3.8
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 646 IQNVNETSEPLETKKKKSLSPYKIGEYGKREKSSKSVGCNKSSTSIKQANASKDKNAIKN 705
++NV + + KK P K E K+EKS KS + K+ + KD+ K+
Sbjct: 49 VENVKSKKSEKKEEPKKEEEPKK--EEEKKEKSKKSEKKDDKKEEAKKEDDKKDEK--KD 104
Query: 706 TNETGQLADQVYDMKLQEMPSQTSDASSKASDCVEPD 742
+ + D+ D K ++ + D K D E +
Sbjct: 105 EKKEDKKDDKKDDKKEEKKEEKKEDEKEKGDDKKEDE 141
>Z81539-4|CAB04392.2| 208|Caenorhabditis elegans Hypothetical
protein F46A8.6 protein.
Length = 208
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Query: 651 ETSEPLETKKKKSLSPYKIGEYGKREKSSKSVGCNKSSTSIKQANASKDKNAIKNTNETG 710
++ EP + KKK + S K+ + K++KSSKS + A D + + + E
Sbjct: 74 KSKEPAKKKKKSADSSQKVSK--KKKKSSKSKKSAEKKKPEVVAPMDPDVKSTQRSAERS 131
Query: 711 QLADQVYDMKLQEMPSQTSDASSKASD 737
+ DQ K + + A + A D
Sbjct: 132 EQPDQTAQTKTAKSGKDMAPAQTPAQD 158
>Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical protein
F17C11.10 protein.
Length = 1101
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 631 EKEDSFEEGNLSMRSIQNVNETSEPLETKKKKSLSPYKI 669
+K+ S + +L + +N ET P+E KKS+SPY++
Sbjct: 1013 KKKTSSKNSDLGQKGKENEAETLCPIEEPAKKSVSPYEM 1051
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 30.7 bits (66), Expect = 6.6
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 652 TSEPLETKKKKSLSPYKIGEYGKREKSSKSVGCNKSSTSIKQANASKDKNAIKNTNETG- 710
+S P T+ KKS K ++K + NK + K + S + N ETG
Sbjct: 204 SSAPASTESKKSKKIKKKKNKKSKDKKKSNSRKNKKNKKSKGKSTSTSEPPTPNQPETGV 263
Query: 711 QLADQVYDMKLQEMPSQTSDASSKASDCVEPDPRS 745
Q A+++ + + + S D EPD ++
Sbjct: 264 QTANELRNDAPESNVNTAMSIQSPVQDTPEPDVKT 298
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/100 (21%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Query: 647 QNVNETSEPLETKKKKSLSPYKIGEYGKREKSSKSVGCNKSSTSIKQANASKDKNAIKNT 706
+ V S+PLE +KK+S + Y SKS+ ++ + K+ +
Sbjct: 424 KEVESISKPLEAEKKRS---RRSSAYSGNSVESKSLESKSLDKEVEPKVRTARKSMAAKS 480
Query: 707 NETGQLADQVYDMKLQEMPSQTSDASSKASDCVEPDPRSL 746
E L + E P +T + +K+S+ ++ + + L
Sbjct: 481 VEPKTLEKDAEPSRKSESPEKTVEPPAKSSEEIKEEKKKL 520
>AL132948-8|CAD31810.1| 426|Caenorhabditis elegans Hypothetical
protein Y39B6A.8 protein.
Length = 426
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 633 EDSFEEGNLSMRSIQNVNETSEPLETKKKKSLSPYKIGEYGKR---EKSSKSVGCNKSS 688
ED+ EEG+ S+ S++ + E LE +K K E+ +++ +SV C+ ++
Sbjct: 316 EDALEEGSGSLESLEKSGNSGEKLEENRKNRRKSVKSLEHSFEQFYQRNKESVSCSATA 374
>AF125964-7|AAD14750.1| 350|Caenorhabditis elegans Hypothetical
protein W03G1.2 protein.
Length = 350
Score = 30.3 bits (65), Expect = 8.8
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 642 SMRSIQNVNETSEPLETKKKKSLSPYKIGEYGKREK-----SSKSVGCNKSSTSIKQANA 696
S R ++N+NE + + + K K ++GK +K +S S+ +KS S K A
Sbjct: 9 SRRKVKNINEKKKKSKARSHKKQQLQKSKQHGKNKKTKTKSTSGSLSVDKSKESEKMLIA 68
Query: 697 SKDKNAIKNTNE 708
K+ + N E
Sbjct: 69 RKNDSRTVNYKE 80
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.133 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,225,588
Number of Sequences: 27539
Number of extensions: 1093719
Number of successful extensions: 3277
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 3249
Number of HSP's gapped (non-prelim): 46
length of query: 1218
length of database: 12,573,161
effective HSP length: 90
effective length of query: 1128
effective length of database: 10,094,651
effective search space: 11386766328
effective search space used: 11386766328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
- SilkBase 1999-2023 -