Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002403-TA|BGIBMGA002403-PA|undefined
(110 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces pombe... 31 0.041
SPBC12D12.02c |cdm1||DNA polymerase delta subunit Cdm1|Schizosac... 31 0.055
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 30 0.073
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 30 0.096
SPBC21D10.08c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 29 0.17
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 29 0.22
SPBC365.05c |slu7||splicing factor Slu7|Schizosaccharomyces pomb... 29 0.22
SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb... 29 0.22
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 29 0.22
SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomy... 29 0.22
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 28 0.29
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 28 0.29
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 28 0.29
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 0.29
SPBC409.19c |||metaxin|Schizosaccharomyces pombe|chr 2|||Manual 28 0.39
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 0.39
SPAC227.02c |||rRNA processing protein Rrp15 |Schizosaccharomyce... 27 0.51
SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe... 27 0.51
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 27 0.51
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 27 0.51
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 0.68
SPAC227.05 |||prefoldin subunit 4|Schizosaccharomyces pombe|chr ... 27 0.68
SPBC1539.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 0.89
SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces pombe... 27 0.89
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 26 1.2
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 26 1.2
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 26 1.6
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 26 1.6
SPAC4F8.07c |hxk2||hexokinase 2 |Schizosaccharomyces pombe|chr 1... 26 1.6
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 25 2.1
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 25 2.1
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 2.7
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 2.7
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 25 2.7
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 25 2.7
SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein Did4... 25 2.7
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 3.6
SPAC926.02 |||conserved fungal protein|Schizosaccharomyces pombe... 25 3.6
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 24 4.8
SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subu... 24 4.8
SPAC17A2.08c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 4.8
SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyce... 24 4.8
SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subun... 24 4.8
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 24 6.3
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 24 6.3
SPAC25G10.08 |||translation initiation factor eIF3b |Schizosacch... 24 6.3
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 24 6.3
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 24 6.3
SPAC16E8.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 6.3
SPBC16E9.01c |php4|SPBP16F5.09c|CCAAT-binding factor complex sub... 24 6.3
SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein L10... 24 6.3
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 24 6.3
SPAC19A8.11c |||recombination protein Irc6 |Schizosaccharomyces ... 23 8.3
SPCC1672.02c |sap1||switch-activating protein Sap1|Schizosacchar... 23 8.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 23 8.3
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 23 8.3
SPBC1539.10 |||ribosome biogenesis protein Nop16 |Schizosaccharo... 23 8.3
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 23 8.3
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 23 8.3
SPBC4.03c |||COPII-coated vesicle component Sfb3 |Schizosaccharo... 23 8.3
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 23 8.3
SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|c... 23 8.3
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 23 8.3
>SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 31.1 bits (67), Expect = 0.041
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 15 KAMLVYAAMTAVGWL--ILRTFNTFFMLPRRMRTQQENIQKTLQEMQRRFPDL-NITEED 71
+ + V+ A+ G++ + + F +P R T +E +Q QEM R + ++ ED
Sbjct: 83 RVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVTNTEKMSHED 142
Query: 72 LKNAEKELDEL 82
L N EK D L
Sbjct: 143 LANLEKISDSL 153
>SPBC12D12.02c |cdm1||DNA polymerase delta subunit
Cdm1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 30.7 bits (66), Expect = 0.055
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 43 RMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKE 85
R + Q +I K + Q PD+ IT + L KE DEL KE
Sbjct: 26 RSNSSQSHIGKKVSSEQSPTPDVTITTKTLDERIKEDDELSKE 68
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 30.3 bits (65), Expect = 0.073
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 43 RMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELD---ELIKEDGQKNKAESDSTEE 99
+ + Q E+++K +EM+ E +++N KELD +L++ + +K A + E
Sbjct: 118 KTQKQIEDLKKEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECE 177
Query: 100 MPAIEQTK 107
+EQ K
Sbjct: 178 KSWLEQQK 185
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 29.9 bits (64), Expect = 0.096
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 56 QEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIEQTKKT 109
+E R +LN EED + AE+E+ L K + AE S +++ E+ KKT
Sbjct: 166 EENGARIEELNSDEEDAEQAEEEI--LEKPVPKDEVAEKHSKDKLKKEEKEKKT 217
>SPBC21D10.08c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 29.1 bits (62), Expect = 0.17
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 49 ENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEE 99
+ IQK L+ R +LN T+E+ ++A E KED + +K S S ++
Sbjct: 210 DQIQKQLECYNVRMMELNKTDENNESAICESQASSKEDERSDKTTSSSKKK 260
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 28.7 bits (61), Expect = 0.22
Identities = 15/63 (23%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 40 LPRRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTE- 98
L R + Q E +++ +++ ++ F +T+ +++ EK+ EL++ ++ + E +TE
Sbjct: 244 LKPRAQQQLEILRREIRDEEQLFAGEKLTQAEIRELEKK-KELLRIAEERQRLEKQATEY 302
Query: 99 EMP 101
+MP
Sbjct: 303 QMP 305
>SPBC365.05c |slu7||splicing factor Slu7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 28.7 bits (61), Expect = 0.22
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 42 RRMRTQQENIQKTL-QEMQRRFPD--LNITEEDLKNAEKELDEL-IKEDGQKNKAESDST 97
R+ + + QK + Q + R+ D + ++ KN EKE+ +L I + +K+K ES++
Sbjct: 307 RKNKASRMTTQKHIDQSILDRYGDGTSKVKDKKAKNNEKEVPDLAILDKSEKSKGESNTD 366
Query: 98 EE 99
EE
Sbjct: 367 EE 368
>SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 497
Score = 28.7 bits (61), Expect = 0.22
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 67 ITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIEQTKKT 109
I+E+ K +K+ E KE +K ++ D++EE+ ++ KK+
Sbjct: 454 ISEKPSKKEKKDKKEKKKEKSKKKRSADDASEEVKKSKKKKKS 496
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 28.7 bits (61), Expect = 0.22
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 48 QENIQK--TLQEMQRRFP-DLNITEEDLKNAEKELDELIK 84
+E + K +LQE F L EEDL+N E+EL EL K
Sbjct: 484 KETVNKLTSLQEQNNEFDRQLKEQEEDLQNKEEELTELRK 523
>SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 28.7 bits (61), Expect = 0.22
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 26 VGWLILRTFNTFFMLPRRMRTQQENIQKTLQEMQRRFPDLNITEEDL 72
V +++ F + +QQENIQK + +++ FP + E +
Sbjct: 713 VSGFVVKRFFEIISKEQEASSQQENIQKAYEIIEKEFPTIGSAENHI 759
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 28.3 bits (60), Expect = 0.29
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 29 LILRTFNTFFMLPRRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQ 88
L+ + TFF+ P + KT+ +++ P E D K ++ DE I DG
Sbjct: 44 LVTKYLTTFFVQPLE-------VAKTVCQVEEYLPKRTKIERDGKQTKEPYDEDI-PDGT 95
Query: 89 KNKAESDSTEEMPAIEQTKKT 109
+ + SD E+ A +T T
Sbjct: 96 EQEGLSDDEHEIYAYFETPTT 116
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 28.3 bits (60), Expect = 0.29
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 39 MLPRRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKED-GQKNKAESDST 97
M+ RM+TQ+++I E+ R + L EED +N +++ +ED Q + + T
Sbjct: 491 MMVSRMKTQEQSI-----ELTRLYKQLQDIEEDYENKLMRMEQQWREDVDQLQEYVEEIT 545
Query: 98 EEM 100
+E+
Sbjct: 546 QEL 548
Score = 25.8 bits (54), Expect = 1.6
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 37 FFMLPRRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNK 91
F L +R++T +E K ++ + +L E LK E E+D L KE+ ++NK
Sbjct: 622 FDELQKRLQTLEEENNKAKEDSTSKTSNLL---EQLKMTEAEVDSLRKEN-EENK 672
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 28.3 bits (60), Expect = 0.29
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 58 MQRRFPDLNITEEDLKNAEKE----LDELIKEDGQKNKAESDSTEEMPAIEQTK 107
+Q D+N EE L +E E +D IK++ QK+ E E+P +Q K
Sbjct: 165 LQNVVADVNNGEEFLSESESEASLEIDSDIKDEKQKSLEEQKIAPEIPVKQQIK 218
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 28.3 bits (60), Expect = 0.29
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 44 MRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAI 103
++ ENI E++++ + + + L E + L+ Q NK+ D T ++ I
Sbjct: 1020 LKNNGENIASLQTEIEKKRAENDDLQSKLSVVSSEYENLLLISSQTNKSLEDKTNQLKYI 1079
Query: 104 EQ 105
E+
Sbjct: 1080 EK 1081
Score = 24.6 bits (51), Expect = 3.6
Identities = 10/37 (27%), Positives = 22/37 (59%)
Query: 36 TFFMLPRRMRTQQENIQKTLQEMQRRFPDLNITEEDL 72
TFF ++ TQ +++T+++ ++ LN+ +E L
Sbjct: 1724 TFFRAEQQRMTQLGFLKETVKKQEKLLKKLNLRQEQL 1760
>SPBC409.19c |||metaxin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 450
Score = 27.9 bits (59), Expect = 0.39
Identities = 12/54 (22%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 56 QEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIEQTKKT 109
++ + F +++ +E ++ EKE+DE + + +E+ S++E+P E+ + +
Sbjct: 349 EDDEASFEEVDDAKESIQ--EKEIDETTESKATHDSSETSSSKELPKEEEKESS 400
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.9 bits (59), Expect = 0.39
Identities = 11/69 (15%), Positives = 35/69 (50%)
Query: 42 RRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMP 101
R + +Q + I T+ +++ + + + EDL+ E +KE+ + K+ ++
Sbjct: 271 RHLESQSDIINTTINDLKSQMTITDESSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLE 330
Query: 102 AIEQTKKTI 110
++ ++++ +
Sbjct: 331 SLLKSRREL 339
>SPAC227.02c |||rRNA processing protein Rrp15 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 27.5 bits (58), Expect = 0.51
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 69 EEDLKNAEKELDELIKEDG--QKNKAESDSTEEM 100
++D +N+E+EL++L ED Q N +E + EE+
Sbjct: 29 KDDSENSEEELEDLNSEDEFYQSNSSEDEIEEEV 62
>SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 520
Score = 27.5 bits (58), Expect = 0.51
Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 43 RMRTQQENIQKTLQEMQRRFPDLNITEEDL---KNAEKELDELIKEDGQKNKAESDSTEE 99
R +++ ++ + R P+ E + +N+E +LDE + DGQ + + S E
Sbjct: 56 RFASEKSALELEKELFSERIPESQSAAEPVLKVENSENDLDEKLVLDGQHVEGDHSSDTE 115
Query: 100 MPAIEQTKKTI 110
+ + +K +
Sbjct: 116 EEVVSEDQKQL 126
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 27.5 bits (58), Expect = 0.51
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 8 VDYWAMGKAMLVYAAMTAVGWLILRTFNTFFMLPRRMRTQQENI 51
+D W++ K +L + A+TA+ I + T L R ++ NI
Sbjct: 1739 LDGWSLPKTVLAFCAVTAIHRFIFKIL-TLLCLSREVKQDSANI 1781
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 27.5 bits (58), Expect = 0.51
Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 57 EMQRRFP-DLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIEQTKKT 109
E++RR ++ ++E ++K + +D L E G + +++SD + K T
Sbjct: 36 EVKRRLESNIAVSENNIKYLRERIDALKVESGSERESQSDKDSSKKYSDSAKST 89
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.1 bits (57), Expect = 0.68
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 47 QQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDG--------QKNKAESDSTE 98
Q +NI+K L EM+ + L++ E++L EL++ K+D KN + S
Sbjct: 1626 QLDNIRKEL-EMRNKLK-LSMLEKNLARVRAELEQSKKKDSPAILSLEASKNTDSNKSNS 1683
Query: 99 EMPAIEQTKKTI 110
E+PA + +K +
Sbjct: 1684 EVPAAQVKEKKL 1695
Score = 24.6 bits (51), Expect = 3.6
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 57 EMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPA-----IEQTKK 108
E +R ++ E+ ++ +K+LD + KE +NK + E+ A +EQ+KK
Sbjct: 1605 EKRREILQKDVEEQVAQSHQKQLDNIRKELEMRNKLKLSMLEKNLARVRAELEQSKK 1661
>SPAC227.05 |||prefoldin subunit 4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 123
Score = 27.1 bits (57), Expect = 0.68
Identities = 11/53 (20%), Positives = 27/53 (50%)
Query: 52 QKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIE 104
Q+ L E I E D+KN + ++++++ + + D +++PA++
Sbjct: 11 QRNLNEFSVLHSRKAIQELDIKNLKTQIEDIVDAKNECELLDEDDGDDIPALK 63
>SPBC1539.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 386
Score = 26.6 bits (56), Expect = 0.89
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 61 RFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIEQTKK 108
R +L + + L ++EKE+DE + +K ES E + +E+ KK
Sbjct: 135 RSNELALDDSLLSSSEKEVDEEADKLLEKVAEESSHPESVSILEEKKK 182
>SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 548
Score = 26.6 bits (56), Expect = 0.89
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 27 GWLILRTFNTFFMLPRRMRTQQ---ENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELI 83
GW + TF+ F L R Q E I+ LQ + + IT+++L +A L L+
Sbjct: 226 GWKLDCTFSFFSDLFSRFPVQSWYSEAIRANLQPLMDAVVERFITDKNLSSATVILSNLL 285
Query: 84 KEDGQKNKAESD 95
K G + +D
Sbjct: 286 KAAGPASIMPND 297
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 71 DLKNAEKELDELIKEDGQKNKAESD 95
D K+ EK LDE +KE NK SD
Sbjct: 71 DSKDKEKPLDEKVKELENANKTLSD 95
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/62 (20%), Positives = 36/62 (58%)
Query: 48 QENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIEQTK 107
QE+++ + +++ + E D ++++KE E + +K+K +S+ +E+ + ++ K
Sbjct: 442 QEDVEMDIVIEKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKK 501
Query: 108 KT 109
K+
Sbjct: 502 KS 503
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 25.8 bits (54), Expect = 1.6
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 42 RRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDG 87
R ++ N+Q + M + +NI E L K L + I E G
Sbjct: 885 RNNNERKRNLQNKISNMDKEVEAININNEGLVTEIKTLQDKIMEIG 930
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 25.8 bits (54), Expect = 1.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 71 DLKNAEKELDELIKEDGQKNKAESDSTEEMPAIEQTKKTI 110
D ++ E+E D D +K +E D+TE A E +T+
Sbjct: 238 DERSDEEESDNEQVNDEKKQSSEEDTTENNSAAEVIDETV 277
>SPAC4F8.07c |hxk2||hexokinase 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 455
Score = 25.8 bits (54), Expect = 1.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 56 QEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKN 90
Q +++ D E L+ A KE DEL ++ QKN
Sbjct: 7 QAVKKLVNDFEYPTESLREAVKEFDELRQKGLQKN 41
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 25.4 bits (53), Expect = 2.1
Identities = 12/46 (26%), Positives = 27/46 (58%)
Query: 64 DLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIEQTKKT 109
D +EE+ + +E E+ E ++++ES+S EE + E++ ++
Sbjct: 84 DSESSEEEEETESEEDSEVSDESESESESESESEEESESEEESDES 129
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 25.4 bits (53), Expect = 2.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 66 NITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIEQ 105
N D + E++LD+++++ K K E S EE+ EQ
Sbjct: 713 NQDASDNEELERKLDKVLEDADAKVKDEESSEEELMNDEQ 752
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 25.0 bits (52), Expect = 2.7
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 57 EMQRRFPDLNITEEDLKNAEKELD-ELIKEDGQKNKAESDSTEEMPAIE 104
E+ +R +N E+DLK EK+L+ L+K + + +T+ A E
Sbjct: 218 EINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNERATKLSEANE 266
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 25.0 bits (52), Expect = 2.7
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 38 FMLPRRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELI 83
++LP M+ +E + +EM+R D + D K A+ + D++I
Sbjct: 30 WILPEAMKADRERHIRQEKEMKRHDDDGRQYQSDRKFAKSKHDDII 75
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 25.0 bits (52), Expect = 2.7
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 56 QEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAE 93
+E+ + N E DLKN ++ I ++ N E
Sbjct: 408 EEITKNKQKQNFNESDLKNMASRIETFINDEASNNHRE 445
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.0 bits (52), Expect = 2.7
Identities = 12/67 (17%), Positives = 32/67 (47%)
Query: 40 LPRRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEE 99
L + + ++ L E L++ E+DL + + EL+ L + + +++ E+
Sbjct: 920 LESELLEKTSKVETLLSEQNELKEKLSLEEKDLLDTKGELESLRENNATVLSEKAEFNEQ 979
Query: 100 MPAIEQT 106
++++T
Sbjct: 980 CKSLQET 986
>SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein
Did4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 25.0 bits (52), Expect = 2.7
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 30 ILRTFNTFFMLPRRMR-TQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKE 85
+L N +P R TQQ + + E ++ D N+ + ++ E+E DEL+ +
Sbjct: 112 LLTGMNKSMNIPAMARITQQFERENEIMEQRQEMIDENMDDALEEDDEEEADELVNK 168
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 24.6 bits (51), Expect = 3.6
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 45 RTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKN 90
R +E ++ +E +R + + E +NA+++ +E K + KN
Sbjct: 667 REAEEKAKREAEENAKREAEEKVKRETEENAKRKAEEEGKREADKN 712
>SPAC926.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 443
Score = 24.6 bits (51), Expect = 3.6
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 40 LPRRMRTQQEN-IQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKE 85
L R R + EN IQ + Q+ PD+ A+KE L+ E
Sbjct: 159 LQERERIEWENTIQTSSQQKYEEIPDIQARRLYFIEADKEASTLVTE 205
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 24.2 bits (50), Expect = 4.8
Identities = 9/39 (23%), Positives = 23/39 (58%)
Query: 67 ITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIEQ 105
+ EE+ + E+DEL+K+ +K + + ++E +++
Sbjct: 180 VHEENTAALDSEIDELMKQINEKEEKIEEISDETDKLQK 218
>SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subunit
Rpc82 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 591
Score = 24.2 bits (50), Expect = 4.8
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 65 LNITEEDLKNAEK--ELDELIKEDGQKNKAESDSTEEMPAIEQ 105
+N +L+ EK ELDEL +ED + + ++ + + Q
Sbjct: 346 VNSASNELRVMEKLNELDELAEEDNYEESVDENANRKSKVLAQ 388
>SPAC17A2.08c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 24.2 bits (50), Expect = 4.8
Identities = 11/48 (22%), Positives = 27/48 (56%)
Query: 45 RTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKA 92
+ QQE + ++ + ++N EE +K++ +LD+ + + K+K+
Sbjct: 223 KLQQEERSQIIKSLMEEELEINEQEEKIKHSFIDLDKTLLNNLTKSKS 270
>SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 218
Score = 24.2 bits (50), Expect = 4.8
Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 51 IQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKE---DGQKNKAESDSTEEMPAIEQTK 107
+QK E+Q +++ TE+D K + ++ +E Q ++++ E P+ E +
Sbjct: 138 LQKKKNELQSSTEEIDSTEKDFDELHKVILKVERELHTLRQNTPSQNEQAEATPSKEIPR 197
Query: 108 KTI 110
+T+
Sbjct: 198 ETV 200
>SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subunit
Rpa34 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 251
Score = 24.2 bits (50), Expect = 4.8
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 68 TEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIEQTKKT 109
T E+L+N KE + +K K K E EE P ++ KK+
Sbjct: 208 TVEELQNKGKEKQKELK----KGKREKKDEEEKPKKKKQKKS 245
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 23.8 bits (49), Expect = 6.3
Identities = 8/40 (20%), Positives = 22/40 (55%)
Query: 44 MRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELI 83
+R + + + + +QR D+NI + K +++L +++
Sbjct: 277 LRNELSKLDEKILSLQRETDDVNIAQNKSKLIQRDLQKVL 316
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 23.8 bits (49), Expect = 6.3
Identities = 10/45 (22%), Positives = 25/45 (55%)
Query: 66 NITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIEQTKKTI 110
+IT+++L ++ ++DE + E + D+ E + +I +T+
Sbjct: 377 DITQDELNSSNADVDEEVIETTSLEEKNVDNQEFVTSISNGNQTL 421
>SPAC25G10.08 |||translation initiation factor eIF3b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 725
Score = 23.8 bits (49), Expect = 6.3
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 47 QQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDS 96
++E I + Q + R P +T+ED+K K+L + + +++ AE S
Sbjct: 610 REEMIGEFKQFIWRPRPPSPLTKEDMKKIRKKLKDYNRLFDEEDIAEQSS 659
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 23.8 bits (49), Expect = 6.3
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 56 QEMQRRFPDLNITEEDLKNAE-------KELDELIKEDGQKNKAESDSTEEMPAIEQTK 107
+E+++ P+ TEE +KN E +E+D+ ++ +K K ++T E + +TK
Sbjct: 212 REVEKEVPEEEETEE-VKNEEDDKAPKIEEVDDESEKKEKKTKKVKETTTETEELNKTK 269
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 23.8 bits (49), Expect = 6.3
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 67 ITEEDLKNAEKELDELIKEDG-QKNKAESDSTEE 99
++EED++ KE +E +ED K + E+ +T E
Sbjct: 538 LSEEDIERMVKEAEEFAEEDKILKERIEARNTLE 571
>SPAC16E8.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 269
Score = 23.8 bits (49), Expect = 6.3
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 59 QRRFPDLNITEEDLKNAEKELDELIKE 85
+ + L ED++N +KEL+E+ K+
Sbjct: 71 ENKLTKLKAPIEDMENTKKELEEIRKQ 97
>SPBC16E9.01c |php4|SPBP16F5.09c|CCAAT-binding factor complex
subunit Php4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 23.8 bits (49), Expect = 6.3
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 43 RMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTE 98
R + Q+ I K +E L + + LKN+ + + ++ + + K +S +TE
Sbjct: 75 REKQYQDTIGKLQKENNELLEQLEMLQAQLKNSTLDSPKEVEVNSEVVKPDSATTE 130
>SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 216
Score = 23.8 bits (49), Expect = 6.3
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 41 PRRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDE 81
P +R+ E I K +E +R F + + LKN + + D+
Sbjct: 6 PANIRSSVETILKGSEEKKRNFTETVELQIGLKNYDPQRDK 46
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 23.8 bits (49), Expect = 6.3
Identities = 11/45 (24%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 56 QEMQRRFPDLNITEEDLK-NAEKELDELIKEDGQKNKAESDSTEE 99
+ MQ+ L + L+ +A + +++ KE ++ K+E + TE+
Sbjct: 1454 EAMQKEIESLKDSNHQLQESASSDAEQITKEQFEQLKSEKERTEK 1498
Score = 23.4 bits (48), Expect = 8.3
Identities = 12/68 (17%), Positives = 33/68 (48%)
Query: 40 LPRRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEE 99
L + + + +Q+T +E +N E+++N +KE+++ ++ + A ++ E
Sbjct: 1364 LEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRLAAAWNEKCEN 1423
Query: 100 MPAIEQTK 107
+ T+
Sbjct: 1424 LKKSSLTR 1431
>SPAC19A8.11c |||recombination protein Irc6 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 246
Score = 23.4 bits (48), Expect = 8.3
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 55 LQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAES 94
L E + PD+ T DL N KE++++ D +KN+ ++
Sbjct: 187 LPERFKGSPDMQST--DLDNLMKEMNQIRDADLEKNEKKA 224
>SPCC1672.02c |sap1||switch-activating protein
Sap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 254
Score = 23.4 bits (48), Expect = 8.3
Identities = 9/45 (20%), Positives = 24/45 (53%)
Query: 42 RRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKED 86
+++ +Q+N+ + ++ L+ EE L ++DE++ E+
Sbjct: 151 KKLTEEQQNVDMLVAKVNFLSKHLHDNEEKLMQVNAKMDEVLAEN 195
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 23.4 bits (48), Expect = 8.3
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 12/65 (18%)
Query: 49 ENIQKTLQEMQRRFPDLNITE----EDLKNAEKE--------LDELIKEDGQKNKAESDS 96
+ IQ +QE + P N EDLK EKE L+++ E +NK E+D+
Sbjct: 4063 DEIQPDIQENNSQPPPENEDHLDLPEDLKLDEKEGDVSKDSDLEDMDMEAADENKEEADA 4122
Query: 97 TEEMP 101
++ P
Sbjct: 4123 EKDEP 4127
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 23.4 bits (48), Expect = 8.3
Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 40 LPRRMRTQQENIQ--KTLQEMQRRFPD 64
LP +++Q + + K L E++RRFP+
Sbjct: 820 LPNDLKSQGQKLTVGKALSEVKRRFPE 846
>SPBC1539.10 |||ribosome biogenesis protein Nop16
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 209
Score = 23.4 bits (48), Expect = 8.3
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 58 MQRRFPDLNITEEDLKNAEKELDELIKE--DGQKNKAESDSTEEMPAIEQTKKTI 110
+++ +PD ED + +ELDEL K GQ D + I KT+
Sbjct: 66 VEKLYPDPKRENEDRELTSEELDELKKSLPPGQAIVRRDDDGNIIEIIHGEAKTL 120
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 23.4 bits (48), Expect = 8.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 51 IQKTLQEMQRRFPDLNITEEDLKNAEKELDELIK 84
+Q L E+ R+ P+ + T EDL A ++LD I+
Sbjct: 787 VQFQLCELIRQKPENSRTVEDLNFAMQQLDASIE 820
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 23.4 bits (48), Expect = 8.3
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 45 RTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKE 85
R+QQ + K + + + L + E DL K L+E + E
Sbjct: 261 RSQQVELDKKSKILHTKLNSLQLIEGDLNACLKVLEECLVE 301
>SPBC4.03c |||COPII-coated vesicle component Sfb3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 23.4 bits (48), Expect = 8.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 51 IQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQK 89
I++ L F D+ I E + NA + + L+KE G K
Sbjct: 384 IERLLDSFPAIFQDVKIPEPVVGNALEVVKLLLKETGGK 422
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 23.4 bits (48), Expect = 8.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 43 RMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKE 85
R++ +Q MQ N T DL++ KEL++ +KE
Sbjct: 958 RLKVDIIGLQNASLNMQSLKDSDNRTISDLESKNKELEKKLKE 1000
>SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1077
Score = 23.4 bits (48), Expect = 8.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 67 ITEEDLKNAEKELDELIKEDGQKNKAESDSTEEM 100
I + LKN E L + I++ G K + SD+ E++
Sbjct: 633 IMSKVLKNTEALLWQAIEQLGFKKASSSDNKEQL 666
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 23.4 bits (48), Expect = 8.3
Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 41 PRRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEM 100
P + T +N+ + E + + D +EE+ A+ E D + E+ ++N A+ +
Sbjct: 18 PGQRGTVADNVDTEMGEFEDAYEDEIESEEEYIEADGEKDNGMDEE-EQNDAQPSKIPWL 76
Query: 101 P 101
P
Sbjct: 77 P 77
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.128 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,260
Number of Sequences: 5004
Number of extensions: 18082
Number of successful extensions: 192
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 128
Number of HSP's gapped (non-prelim): 80
length of query: 110
length of database: 2,362,478
effective HSP length: 64
effective length of query: 46
effective length of database: 2,042,222
effective search space: 93942212
effective search space used: 93942212
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)
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