Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002403-TA|BGIBMGA002403-PA|undefined
(110 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 29 0.029
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 27 0.20
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 25 0.47
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 25 0.82
AF164153-1|AAD47077.1| 131|Anopheles gambiae ribosomal protein ... 25 0.82
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 24 1.1
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 24 1.1
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 23 1.9
AF269154-1|AAF91399.1| 76|Anopheles gambiae transcription fact... 23 3.3
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 22 4.4
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 22 4.4
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 22 4.4
AF316638-1|AAG45166.1| 211|Anopheles gambiae glutathione S-tran... 22 4.4
DQ182013-1|ABA56305.1| 75|Anopheles gambiae G(alpha)c protein. 21 7.7
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 21 7.7
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 29.5 bits (63), Expect = 0.029
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 40 LPRRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAE 93
+ R M +++ I++ EM +R P +E + + +K+LD +K Q +A+
Sbjct: 283 MTREMAKKEQEIREVEAEMSKRHPMFIKAKEKVAHTQKKLDGALKTLEQARRAD 336
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 26.6 bits (56), Expect = 0.20
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 42 RRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQK 89
+++ T E + + L E ++ L E EKE E ++EDG++
Sbjct: 874 KKVLTDTEEVDRKLSEALKQQKTLQKELESWIQKEKEAQEKLEEDGKR 921
Score = 24.2 bits (50), Expect = 1.1
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 9/55 (16%)
Query: 43 RMRTQQENIQKTLQEMQ-----RRFPDLNITEEDLKNAEKELDELIKEDGQKNKA 92
R++T +E ++ L E Q RR + I E +LK K+L+EL DGQ+ +
Sbjct: 199 RLKTLEEE-KEELSEYQKWDKARRTLEYVIYETELKETRKQLEEL---DGQRKSS 249
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 25.4 bits (53), Expect = 0.47
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 44 MRTQQENIQKTLQEMQR-RFPDLNIT-EEDLKNAEKELDELIKEDGQKNKAESDSTEE 99
M + + K ++ ++ R + IT EE++ E++ + E+ ++++ E D TEE
Sbjct: 441 MHDPESTVSKEMEALREGRQKKVQITFEEEIYKGEEDYEGEEDEEDEEDEYEGDDTEE 498
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 24.6 bits (51), Expect = 0.82
Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 43 RMRTQQENIQKTLQEMQRRFPDLNITEEDL-KNAEKELDELIKEDGQKNKAESDSTEEMP 101
++R Q+ I+ +++E+Q R +L + DL + K +K Q+ K + + T +
Sbjct: 630 KIRNQRGQIENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKCK-ELTARLV 688
Query: 102 AIEQTK 107
+++ K
Sbjct: 689 NVDEEK 694
>AF164153-1|AAD47077.1| 131|Anopheles gambiae ribosomal protein S17
protein.
Length = 131
Score = 24.6 bits (51), Expect = 0.82
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 40 LPRRMR-TQQENIQKTLQEMQRR-----FPDLNITEEDLKNAEKELDELIK 84
L +R+R +Q I LQE +R PD++ E+D+ + E E++K
Sbjct: 57 LMKRLRHSQVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLK 107
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 24.2 bits (50), Expect = 1.1
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 45 RTQQENIQKTLQEMQRRFPDLNITEED----LKNAEKELDELIKEDGQKNKAESDSTEEM 100
RT+ + IQK L E +R+ + + + L ++ D L E +K K + ++
Sbjct: 305 RTRNQQIQKYLCEQKRKIGEFEVERDQAAGILAKHDETYDALKAERVEKEKLVKEEIKQY 364
Query: 101 PAIEQTKKT 109
+ K++
Sbjct: 365 DELVSAKES 373
Score = 24.2 bits (50), Expect = 1.1
Identities = 16/82 (19%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 33 TFNTFFMLPRRMRTQQENIQKTLQEM---QRRFPDL-NITEEDLKNAEKELDELIKEDGQ 88
+ + F + MR E +KTL+++ ++R +L ++ +++ K E+ ++ Q
Sbjct: 381 SLDKFAKVQANMRATNERRKKTLEQIAAEEKRLLELQDVPKKNKKEIEESEAKIESLTRQ 440
Query: 89 KNKAESDSTEEMPAIEQTKKTI 110
K + E+ T + ++ K +
Sbjct: 441 KTEVEAKLTANLATLKDETKVL 462
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 24.2 bits (50), Expect = 1.1
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 50 NIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIEQTKK 108
N+Q + E +++ T + L+ KEL E I +G E E+ A+E K+
Sbjct: 255 NLQSVIGESEQKIESNCATAQTLEQEAKELQERIDTEGGGVLGE---LEQQLAVESKKE 310
Score = 23.8 bits (49), Expect = 1.4
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 45 RTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIE 104
+ Q +++ + +Q+R +++ T +++ A L + IK+ K K S S E
Sbjct: 835 KEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQ--HKEKMNSQSKELKAKYH 892
Query: 105 QTKKTI 110
Q K +
Sbjct: 893 QRDKLL 898
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/64 (17%), Positives = 34/64 (53%)
Query: 42 RRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMP 101
R +++ +E+++++ ++ + + E+D + + E++EL K + E++
Sbjct: 787 RELKSAEEDLKRSKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQIA 846
Query: 102 AIEQ 105
A++Q
Sbjct: 847 ALQQ 850
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 38 FMLPRRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKE 78
+++ ++R Q+E+ Q+ +E +RR E L+ ++E
Sbjct: 64 WLMEEKLREQREDAQRREEEARRREEAAKADNEKLRVEQQE 104
>AF269154-1|AAF91399.1| 76|Anopheles gambiae transcription
factor proboscipedia protein.
Length = 76
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Query: 40 LPRRMRTQQENIQKTLQEMQRRF 62
LPRR+RT N Q L E+++ F
Sbjct: 23 LPRRLRTAYTNTQ--LLELEKEF 43
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 46 TQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDS 96
T IQ +++Q +LN ++E+L+ A K L+ + +D+
Sbjct: 744 TASSFIQHATEKLQSLTQELNQSDEELEQAIKNQRNLLAAGRSPARCPADT 794
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 46 TQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDS 96
T IQ +++Q +LN ++E+L+ A K L+ + +D+
Sbjct: 744 TASSFIQHATEKLQSLTQELNQSDEELEQAIKNQRNLLAAGRSPARCPADT 794
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/38 (26%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 71 DLKNAEKELDELIKEDGQK-NKAESDSTEEMPAIEQTK 107
D ++ E+E +E + D ++ +++ES+ +EE +E+ +
Sbjct: 76 DEEHLEEEQEEEAEADEEEADESESEESEESDELEEAR 113
>AF316638-1|AAG45166.1| 211|Anopheles gambiae glutathione
S-transferase D12 protein.
Length = 211
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 46 TQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIK 84
T N+Q+ +M PDL T K E+EL L++
Sbjct: 172 TAYPNVQRWFAKMGTHIPDLEPTR---KTIEEELRALLQ 207
>DQ182013-1|ABA56305.1| 75|Anopheles gambiae G(alpha)c protein.
Length = 75
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 52 QKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAE 93
Q+T ++ + D ++T + E D+++ ED + N+ E
Sbjct: 19 QRTQRQKWTKCFDCSVTSILFLVSTSEFDQVLAEDRKTNRLE 60
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/64 (15%), Positives = 30/64 (46%)
Query: 42 RRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMP 101
R+ R QQ++ Q+ Q+ Q+R + + +++ + ++ Q+ + + ++
Sbjct: 303 RQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQH 362
Query: 102 AIEQ 105
+Q
Sbjct: 363 QQQQ 366
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.316 0.128 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,292
Number of Sequences: 2123
Number of extensions: 3517
Number of successful extensions: 27
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 20
length of query: 110
length of database: 516,269
effective HSP length: 56
effective length of query: 54
effective length of database: 397,381
effective search space: 21458574
effective search space used: 21458574
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 43 (21.4 bits)
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