GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002402-TA|BGIBMGA002402-PA|IPR001683|Phox-like
         (464 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    23   4.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   4.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   4.5  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)

Query: 20  VEDFENQDTLLKHVDITIVESEKRANGTLHVRDHYTVYLVDLKVTDPDYKLVQSKISTIW 79
           +E + N      H  +++   ++R +    + +  T +  DL + + D        ST+ 
Sbjct: 121 LEKYPNVKIYFNHKLMSVSFEDERISVMNLITEEITTHQADL-IIEAD-----GAYSTL- 173

Query: 80  RRYTE----FEQIHDYLQVTYPHVVIPP 103
           RRY +    FE    Y+Q  Y  +VIPP
Sbjct: 174 RRYMQLTPLFEYSQTYIQHGYLELVIPP 201


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)

Query: 20  VEDFENQDTLLKHVDITIVESEKRANGTLHVRDHYTVYLVDLKVTDPDYKLVQSKISTIW 79
           +E + N      H  +++   ++R +    + +  T +  DL + + D        ST+ 
Sbjct: 121 LEKYPNVKIYFNHKLMSVSFEDERISVMNLITEEITTHQADL-IIEAD-----GAYSTL- 173

Query: 80  RRYTE----FEQIHDYLQVTYPHVVIPP 103
           RRY +    FE    Y+Q  Y  +VIPP
Sbjct: 174 RRYMQLTPLFEYSQTYIQHGYLELVIPP 201


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)

Query: 20  VEDFENQDTLLKHVDITIVESEKRANGTLHVRDHYTVYLVDLKVTDPDYKLVQSKISTIW 79
           +E + N      H  +++   ++R +    + +  T +  DL + + D        ST+ 
Sbjct: 121 LEKYPNVKIYFNHKLMSVSFEDERISVMNLITEEITTHQADL-IIEAD-----GAYSTL- 173

Query: 80  RRYTE----FEQIHDYLQVTYPHVVIPP 103
           RRY +    FE    Y+Q  Y  +VIPP
Sbjct: 174 RRYMQLTPLFEYSQTYIQHGYLELVIPP 201


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.132    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,811
Number of Sequences: 317
Number of extensions: 4505
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 3
length of query: 464
length of database: 114,650
effective HSP length: 59
effective length of query: 405
effective length of database: 95,947
effective search space: 38858535
effective search space used: 38858535
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)