Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002401-TA|BGIBMGA002401-PA|IPR000092|Polyprenyl
synthetase, IPR008949|Terpenoid synthase
(307 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1127 - 27807784-27807963,27808362-27808460,27809076-278091... 64 2e-10
12_01_0979 - 9914779-9915327,9915409-9915536,9915947-9916050,991... 62 4e-10
05_07_0261 + 28764571-28764733,28766039-28766153,28766241-287663... 62 4e-10
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 39 0.004
07_03_1039 - 23454130-23454552,23454859-23455536 35 0.072
01_06_0411 + 29151647-29151790,29152974-29153039,29153398-291535... 34 0.17
08_01_0622 + 5429317-5429403,5429673-5429765,5429950-5430030,543... 33 0.22
02_05_0247 - 27141859-27142887 32 0.50
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594... 31 0.88
11_06_0061 - 19702893-19703869,19703960-19704098,19704166-197042... 31 1.2
08_01_0461 - 4063614-4064375,4064439-4066017,4066041-4066086,406... 30 2.0
04_04_0850 - 28697462-28697684,28697894-28697971,28698103-286984... 30 2.7
11_06_0266 - 21791757-21792982,21793154-21793178 29 6.2
02_05_0288 - 27549718-27549940,27550025-27550102,27550282-275506... 29 6.2
05_06_0265 - 26759960-26760088,26760315-26760386,26760457-267605... 28 8.2
>06_03_1127 -
27807784-27807963,27808362-27808460,27809076-27809165,
27809272-27809404,27809539-27809624,27810028-27810099,
27810329-27810415,27810485-27810616,27810718-27810789,
27810957-27811037,27811871-27811963,27812298-27812465
Length = 430
Score = 63.7 bits (148), Expect = 2e-10
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 5/177 (2%)
Query: 36 VGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAMIIALEKTLELGH 95
+ +I +M+H ASLL DD+ D++ RRG+ + I G ++ A ++ + A LG+
Sbjct: 174 IAEITEMIHVASLLHDDVLDDADTRRGVSSLNCIMGNKLSVLAGDFLLSRACVALAALGN 233
Query: 96 PLATTVYTEQLLELHRGQGMEIYWRDNFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLFSE 155
++ + L G+ M+I Q S D Y Q T KT L + + + + +
Sbjct: 234 TEVVSLMATAVEHLVTGETMQIS-TSREQRRSMDYYLQKTYYKTASLISNSCKAVAILAG 292
Query: 156 NKSDFTNLS----AVLGLYFQIRDDYCNLSMREYTENKSYCEDLTEGKFSFPIIHAI 208
+ +D + L+ LGL FQ+ DD + + + K D+ G + P+++A+
Sbjct: 293 HTADVSMLAYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSLTDIRHGIITAPMLYAM 349
>12_01_0979 -
9914779-9915327,9915409-9915536,9915947-9916050,
9919832-9919946,9921036-9921528
Length = 462
Score = 62.5 bits (145), Expect = 4e-10
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 26 LKISEEKLRLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAMII 85
L+++ E RL +I++M+H ASL+ DD+ D+S +RRG H +YG + A ++
Sbjct: 203 LELTTEHQRLA-EIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQ 261
Query: 86 ALEKTLELGHPLATTVYTEQLLELHRGQGMEIYWRDNFQCP-SEDEYKQMTIKKTGGLFM 144
+ L + + ++ + + G+ + F C + D+Y + KT L
Sbjct: 262 SSWFLANLENIEVIKLISQVIKDFASGEIKQA--STLFDCDITLDDYLLKSYYKTASLIA 319
Query: 145 LAIRLMQLFSENKS----DFTNLSAVLGLYFQIRDDYCNLSMREYTENKSYCEDLTEGKF 200
+ R +FS + LGL FQ+ DD + + K DL +G
Sbjct: 320 ASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNL 379
Query: 201 SFPIIHAIRSQEDDKQVL 218
+ P+I A++ + ++++
Sbjct: 380 TAPVIFALQDEPQLREII 397
>05_07_0261 +
28764571-28764733,28766039-28766153,28766241-28766344,
28766571-28766698,28766765-28767328
Length = 357
Score = 62.5 bits (145), Expect = 4e-10
Identities = 51/222 (22%), Positives = 103/222 (46%), Gaps = 15/222 (6%)
Query: 26 LKISEEKLRLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANY---- 81
L+++ E RL +I++M+H ASL+ DD+ D+S +RRG H +YG + A ++
Sbjct: 93 LELTTEHQRLA-EIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQ 151
Query: 82 -AMIIALEKTLELGHPLATTVYTEQLLELHRGQGMEIYWRDNFQCP-SEDEYKQMTIKKT 139
+ +A + +E+ ++ + ++ + + G+ + F C + D+Y + KT
Sbjct: 152 SSWFLANLENIEVIKLISQMMCSQVIKDFASGEIKQA--STLFDCDVTLDDYLLKSYYKT 209
Query: 140 GGLFMLAIRLMQLFSENKS----DFTNLSAVLGLYFQIRDDYCNLSMREYTENKSYCEDL 195
L + R +FS + LGL FQ+ DD + + K DL
Sbjct: 210 ASLLASSTRSAAIFSGVSTTICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDL 269
Query: 196 TEGKFSFPIIHAIRSQEDDKQVLHLSIISFD--RTKLDILRQ 235
+G + P+I A++ + ++++ D T +D++ +
Sbjct: 270 AKGNLTAPVIFALQDEPKLREIIDSEFSESDSLATAIDLVHR 311
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 39.1 bits (87), Expect = 0.004
Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 101 VYTEQLLELHRGQGMEIY----WRDNFQCPSEDEYKQMTIKKTGGL-FMLAIRLMQLFSE 155
+++E L+ GQ +++ D+ S + Y+++ KT F L + L S
Sbjct: 226 IWSEIALQTSLGQMLDLISTHTGADDLAKYSIEGYRRIVKYKTAYYSFYLPVANALLLSG 285
Query: 156 NK-SDFTNLSAVL---GLYFQIRDDYCNLSMREYTENKSYCEDLTEGKFSFPIIHAIRSQ 211
K DF+ L +L G+YFQI+DDY + T K D+ + K S+ I+ A+
Sbjct: 286 AKLEDFSGLKDILIEMGIYFQIQDDYLDCFADPNTIGK-IGTDIEDHKCSWLIVQALGHA 344
Query: 212 EDDK-QVLHLSIISFDRTKLDILRQRTRDVEVKRYCITLLE 251
++++ +VLH + D + + +++ +++K + I L +
Sbjct: 345 DNNQIEVLHRNYGKKDSSSVSEVKRTYAALDLKIWAIDLAD 385
>07_03_1039 - 23454130-23454552,23454859-23455536
Length = 366
Score = 35.1 bits (77), Expect = 0.072
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 11 GKQIRTKLASAFNYWLKISEEKLRLVGDIVQMLHNASLLIDDI--QDNSILRRGIPVAHS 68
GK++R L A + E V+M+H SL+ DD+ D+ LRRG P H
Sbjct: 106 GKRVRPALCLAACAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHV 165
Query: 69 IYG 71
+YG
Sbjct: 166 VYG 168
>01_06_0411 +
29151647-29151790,29152974-29153039,29153398-29153538,
29153638-29153724,29153968-29154084,29154177-29154265,
29154510-29154561,29154667-29154762,29154835-29154879,
29155002-29155091,29155164-29155235,29155490-29155618
Length = 375
Score = 33.9 bits (74), Expect = 0.17
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 21/201 (10%)
Query: 36 VGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAMIIALEKTLELGH 95
+G ++ L L++DDI DNS RRG P + V + A N +I+ + L
Sbjct: 111 LGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVG--LIAVNDGIILRNHISRILQR 168
Query: 96 PLATTVYTEQLLELHR--------GQGMEIYWRDNFQCP----SEDEYKQMTIKKTGGL- 142
+Y L++L GQ +++ + + ++++ KT
Sbjct: 169 HFKGKLYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNLTVHRRIVQYKTAYYS 228
Query: 143 FMLAIRLMQLFS----ENKSDFTNLSAVLGLYFQIRDDYCNLSMREYTENKSYCEDLTEG 198
F L + L S +N D N+ +G YFQ++DDY + K D+ +
Sbjct: 229 FYLPVACALLLSGENLDNFGDVKNILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDY 287
Query: 199 KFSFPIIHAI-RSQEDDKQVL 218
K S+ ++ A+ R+ E+ K +L
Sbjct: 288 KCSWLVVQALERADENQKHIL 308
>08_01_0622 +
5429317-5429403,5429673-5429765,5429950-5430030,
5430166-5430237,5430379-5430495,5430585-5430671,
5431126-5431200,5431442-5431566,5432489-5432621,
5432719-5432808,5433210-5433389
Length = 379
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 27 KISEEKLRLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAM 83
+I E +RL +I +++H SL+ DD+ D++ RRG+ + + G + A ++ +
Sbjct: 134 EIRERYMRLA-EITELIHVTSLIHDDVLDDANTRRGMDSLNCVMGKKLAVLAGDFLL 189
>02_05_0247 - 27141859-27142887
Length = 342
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 40 VQMLHNASLLIDDIQ--DNSILRRGIPVAHSIYGVASTINAAN 80
++MLH ASL+ DD+ D + RRG P H+ YG + A +
Sbjct: 116 LEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGD 158
>04_04_1432 -
33558895-33559023,33559215-33559286,33559405-33559494,
33559574-33559618,33559693-33559788,33559905-33559956,
33560044-33560132,33560226-33560342,33560448-33560534,
33560646-33560761,33560854-33560878,33561816-33562121
Length = 407
Score = 31.5 bits (68), Expect = 0.88
Identities = 54/237 (22%), Positives = 101/237 (42%), Gaps = 29/237 (12%)
Query: 9 VPGKQIRTKLASAFNYWL-----KISEEKLRL---VGDIVQMLHNASLLIDDIQDNSILR 60
VPG ++ L+ +Y L ++ +E L +G V+ L ++L++DDI DN+ R
Sbjct: 108 VPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLDDITDNAYTR 167
Query: 61 RGIPVAHSIYGVASTINAANYAMIIALEKTLELGHPLATTVYTEQLLELHRGQGMEIYWR 120
R + + V ++A N +++ + Y L+EL G++
Sbjct: 168 RDNLCWYKLPTVG--MSAINDGVLLKCHVQAIIKRYFKEKFYFLDLMELWNEIGLQTAMG 225
Query: 121 DNFQCPSEDE------------YKQMTIKKTGGL-FMLAIRLMQLFSENK-SDFTNLSAV 166
+ Y+++ KT F L + L + + SD+ L V
Sbjct: 226 QMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGARLSDYVELKNV 285
Query: 167 L---GLYFQIRDDYCNLSMREYTENKSYCEDLTEGKFSFPIIHAIR-SQEDDKQVLH 219
L G+YFQI+DDY + K D+ + K S+ I+ A+ + E++ ++L+
Sbjct: 286 LIEMGVYFQIQDDYLDCFGDPEVIGK-VGTDIEDYKCSWLIVQAMELANENEMKILY 341
>11_06_0061 -
19702893-19703869,19703960-19704098,19704166-19704287,
19704362-19704416,19704508-19704624,19704718-19705413,
19706358-19706393,19707190-19708236
Length = 1062
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 107 LELHRGQGMEIYWRDNFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLFSENKSDFTNLSAV 166
L L G + + W + D ++ I + +F I+ + + EN +L +
Sbjct: 895 LGLREGTALGLMWS---YTDAVDNISKLCITDSMEIFEDHIKTLTILEENGFSVQSLQQI 951
Query: 167 LGLYFQIRDDYCNLSMREYTENKSYCEDLTEGKFSFPIIHAIRSQED 213
L QIR DY N S+R+ + K E + + F+ + A+ + D
Sbjct: 952 LTKLLQIRSDYTN-SLRDGEKLK---EQIADKAFAVSRVDALLDEND 994
>08_01_0461 - 4063614-4064375,4064439-4066017,4066041-4066086,
4066416-4066933,4067435-4067694,4068089-4068594,
4068667-4071319
Length = 2107
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 18 LASAFNYWLKISEEKLRLVGDIVQMLHNASLLIDDIQDNSI 58
L S +WLK +E LRLV D L++ LI I D I
Sbjct: 1903 LTSLLGHWLKYTEYLLRLVLDTANTLNSRGDLIRQIFDKEI 1943
>04_04_0850 -
28697462-28697684,28697894-28697971,28698103-28698495,
28698590-28698893,28698978-28699188,28699943-28700674
Length = 646
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 5 YIQQVPGKQIRTKLASAFNYWLKISEEKLRLVGDIVQMLHNASLLIDDI 53
+ VP K++ + A W+++ EK R G H A IDDI
Sbjct: 178 WFANVPHKELTVE--KAVQNWIRVEGEKFRFPGGGTMFPHGAGAYIDDI 224
>11_06_0266 - 21791757-21792982,21793154-21793178
Length = 416
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 58 ILRRGIPVAHSIYGVASTINAANYAMIIALEKTLELGHPLATTVYTEQLLELHRGQGMEI 117
+ R +P+ + V TI+AA Y M K + P + + YT + +HR
Sbjct: 151 VYTRSLPIINGSGVVDCTIHAAQYVMSFC--KVILSSPPGSGSAYTVAAISVHRNGAKLA 208
Query: 118 YWR 120
WR
Sbjct: 209 LWR 211
>02_05_0288 -
27549718-27549940,27550025-27550102,27550282-27550674,
27550752-27551347,27552232-27552978
Length = 678
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 5 YIQQVPGKQIRTKLASAFNYWLKISEEKLRLVGDIVQMLHNASLLIDDI 53
+ VP K++ + A W+++ +K R G H A IDDI
Sbjct: 183 WFANVPHKELTVE--KAVQNWIRVDGDKFRFPGGGTMFPHGADAYIDDI 229
>05_06_0265 -
26759960-26760088,26760315-26760386,26760457-26760546,
26760649-26760693,26760785-26760880,26760980-26761031,
26761209-26761297,26761388-26761504,26761680-26761737,
26761834-26761936,26762027-26762051,26762677-26762826
Length = 341
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 167 LGLYFQIRDDYCNLSMREYTENKSYCEDLTEGKFSFPIIHAI-RSQEDDKQVL 218
+G+YFQ++DDY + K D+ + K S+ ++ A+ R+ E K VL
Sbjct: 223 MGIYFQVQDDYLDCYGDPKFIGK-IGTDIEDYKCSWLVVQALERADESQKSVL 274
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.321 0.137 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,410,638
Number of Sequences: 37544
Number of extensions: 331457
Number of successful extensions: 735
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 723
Number of HSP's gapped (non-prelim): 19
length of query: 307
length of database: 14,793,348
effective HSP length: 82
effective length of query: 225
effective length of database: 11,714,740
effective search space: 2635816500
effective search space used: 2635816500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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