Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002401-TA|BGIBMGA002401-PA|IPR000092|Polyprenyl
synthetase, IPR008949|Terpenoid synthase
(307 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005252-1|AAH05252.1| 300|Homo sapiens geranylgeranyl diphosph... 365 e-100
AL391994-8|CAI13753.1| 300|Homo sapiens geranylgeranyl diphosph... 365 e-100
AF125394-1|AAD43050.1| 300|Homo sapiens gerannylgeranyl pyropho... 365 e-100
AF057698-1|AAG45581.1| 300|Homo sapiens geranylgeranyl pyrophos... 365 e-100
AB019036-1|BAA77251.1| 300|Homo sapiens geranylgeranyl pyrophos... 365 e-100
AB017971-1|BAA75909.1| 300|Homo sapiens geranylgeranyl diphosph... 365 e-100
AB016043-1|BAA76511.1| 300|Homo sapiens GGPP synthase protein. 365 e-100
BC067768-1|AAH67768.1| 300|Homo sapiens GGPS1 protein protein. 362 e-99
BC049211-1|AAH49211.1| 414|Homo sapiens PDSS1 protein protein. 54 8e-07
AL390961-9|CAI17280.1| 415|Homo sapiens trans-prenyltransferase... 54 8e-07
AF118395-1|AAD28559.1| 376|Homo sapiens trans-prenyltransferase... 54 8e-07
AB210838-1|BAE48216.1| 415|Homo sapiens subunit 1 of decaprenyl... 54 8e-07
AK223414-1|BAD97134.1| 415|Homo sapiens trans-prenyltransferase... 52 2e-06
AB209763-1|BAD93000.1| 297|Homo sapiens trans-prenyltransferase... 51 4e-06
BC063635-1|AAH63635.1| 306|Homo sapiens PDSS1 protein protein. 51 6e-06
J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein. 37 0.10
M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl ... 36 0.18
D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein. 36 0.18
BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate sy... 36 0.18
AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate sy... 36 0.18
Z25884-1|CAA81103.1| 988|Homo sapiens human ClC-1 muscle chlori... 31 3.8
Z25753-1|CAB56792.1| 703|Homo sapiens skeletal muscle chloride ... 31 3.8
Z25587-1|CAA80996.1| 988|Homo sapiens human ClC-1 muscle chlori... 31 3.8
BC113495-1|AAI13496.1| 988|Homo sapiens chloride channel 1, ske... 31 3.8
BC112156-1|AAI12157.1| 988|Homo sapiens chloride channel 1, ske... 31 3.8
AF111783-1|AAD29949.1| 1939|Homo sapiens myosin heavy chain IIb ... 31 6.7
BC114545-1|AAI14546.1| 1939|Homo sapiens myosin, heavy chain 1, ... 30 8.9
AF111785-1|AAD29951.1| 1939|Homo sapiens myosin heavy chain IIx/... 30 8.9
>BC005252-1|AAH05252.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase 1 protein.
Length = 300
Score = 365 bits (898), Expect = e-100
Identities = 168/289 (58%), Positives = 219/289 (75%), Gaps = 12/289 (4%)
Query: 2 PYTYIQQVPGKQIRTKLASAFNYWLKISEEKLRLVGDIVQMLHNASLLIDDIQDNSILRR 61
PY Y+ Q+PGKQ+RTKL+ AFN+WLK+ E+KL+++ ++ +MLHNASLLIDDI+DNS LRR
Sbjct: 15 PYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRR 74
Query: 62 GIPVAHSIYGVASTINAANYAMIIALEKTLELGHPLATTVYTEQLLELHRGQGMEIYWRD 121
G PVAHSIYG+ S IN+ANY + LEK L L HP A ++T QLLELH+GQG++IYWRD
Sbjct: 75 GFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRD 134
Query: 122 NFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLFSENKSDFTNLSAVLGLYFQIRDDYCNLS 181
N+ CP+E+EYK M ++KTGGLF LA+ LMQLFS+ K D L LGL+FQIRDDY NL
Sbjct: 135 NYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLH 194
Query: 182 MREYTENKSYCEDLTEGKFSFPIIHAIRSQEDDKQVLHLSIISFDRTKLDILRQRTRDVE 241
+EY+ENKS+CEDLTEGKFSFP IHAI S+ + QV +ILRQRT +++
Sbjct: 195 SKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQV------------QNILRQRTENID 242
Query: 242 VKRYCITLLEKLGSFRYTRGILNDLDARAREEVSRLGGNPQLEALLDDL 290
+K+YC+ LE +GSF YTR L +L+A+A +++ GGNP+L AL+ L
Sbjct: 243 IKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHL 291
>AL391994-8|CAI13753.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase 1 protein.
Length = 300
Score = 365 bits (898), Expect = e-100
Identities = 168/289 (58%), Positives = 219/289 (75%), Gaps = 12/289 (4%)
Query: 2 PYTYIQQVPGKQIRTKLASAFNYWLKISEEKLRLVGDIVQMLHNASLLIDDIQDNSILRR 61
PY Y+ Q+PGKQ+RTKL+ AFN+WLK+ E+KL+++ ++ +MLHNASLLIDDI+DNS LRR
Sbjct: 15 PYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRR 74
Query: 62 GIPVAHSIYGVASTINAANYAMIIALEKTLELGHPLATTVYTEQLLELHRGQGMEIYWRD 121
G PVAHSIYG+ S IN+ANY + LEK L L HP A ++T QLLELH+GQG++IYWRD
Sbjct: 75 GFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRD 134
Query: 122 NFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLFSENKSDFTNLSAVLGLYFQIRDDYCNLS 181
N+ CP+E+EYK M ++KTGGLF LA+ LMQLFS+ K D L LGL+FQIRDDY NL
Sbjct: 135 NYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLH 194
Query: 182 MREYTENKSYCEDLTEGKFSFPIIHAIRSQEDDKQVLHLSIISFDRTKLDILRQRTRDVE 241
+EY+ENKS+CEDLTEGKFSFP IHAI S+ + QV +ILRQRT +++
Sbjct: 195 SKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQV------------QNILRQRTENID 242
Query: 242 VKRYCITLLEKLGSFRYTRGILNDLDARAREEVSRLGGNPQLEALLDDL 290
+K+YC+ LE +GSF YTR L +L+A+A +++ GGNP+L AL+ L
Sbjct: 243 IKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHL 291
>AF125394-1|AAD43050.1| 300|Homo sapiens gerannylgeranyl
pyrophosphate synthase protein.
Length = 300
Score = 365 bits (898), Expect = e-100
Identities = 168/289 (58%), Positives = 219/289 (75%), Gaps = 12/289 (4%)
Query: 2 PYTYIQQVPGKQIRTKLASAFNYWLKISEEKLRLVGDIVQMLHNASLLIDDIQDNSILRR 61
PY Y+ Q+PGKQ+RTKL+ AFN+WLK+ E+KL+++ ++ +MLHNASLLIDDI+DNS LRR
Sbjct: 15 PYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRR 74
Query: 62 GIPVAHSIYGVASTINAANYAMIIALEKTLELGHPLATTVYTEQLLELHRGQGMEIYWRD 121
G PVAHSIYG+ S IN+ANY + LEK L L HP A ++T QLLELH+GQG++IYWRD
Sbjct: 75 GFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRD 134
Query: 122 NFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLFSENKSDFTNLSAVLGLYFQIRDDYCNLS 181
N+ CP+E+EYK M ++KTGGLF LA+ LMQLFS+ K D L LGL+FQIRDDY NL
Sbjct: 135 NYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLH 194
Query: 182 MREYTENKSYCEDLTEGKFSFPIIHAIRSQEDDKQVLHLSIISFDRTKLDILRQRTRDVE 241
+EY+ENKS+CEDLTEGKFSFP IHAI S+ + QV +ILRQRT +++
Sbjct: 195 SKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQV------------QNILRQRTENID 242
Query: 242 VKRYCITLLEKLGSFRYTRGILNDLDARAREEVSRLGGNPQLEALLDDL 290
+K+YC+ LE +GSF YTR L +L+A+A +++ GGNP+L AL+ L
Sbjct: 243 IKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHL 291
>AF057698-1|AAG45581.1| 300|Homo sapiens geranylgeranyl
pyrophosphate synthetase protein.
Length = 300
Score = 365 bits (898), Expect = e-100
Identities = 168/289 (58%), Positives = 219/289 (75%), Gaps = 12/289 (4%)
Query: 2 PYTYIQQVPGKQIRTKLASAFNYWLKISEEKLRLVGDIVQMLHNASLLIDDIQDNSILRR 61
PY Y+ Q+PGKQ+RTKL+ AFN+WLK+ E+KL+++ ++ +MLHNASLLIDDI+DNS LRR
Sbjct: 15 PYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRR 74
Query: 62 GIPVAHSIYGVASTINAANYAMIIALEKTLELGHPLATTVYTEQLLELHRGQGMEIYWRD 121
G PVAHSIYG+ S IN+ANY + LEK L L HP A ++T QLLELH+GQG++IYWRD
Sbjct: 75 GFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRD 134
Query: 122 NFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLFSENKSDFTNLSAVLGLYFQIRDDYCNLS 181
N+ CP+E+EYK M ++KTGGLF LA+ LMQLFS+ K D L LGL+FQIRDDY NL
Sbjct: 135 NYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLH 194
Query: 182 MREYTENKSYCEDLTEGKFSFPIIHAIRSQEDDKQVLHLSIISFDRTKLDILRQRTRDVE 241
+EY+ENKS+CEDLTEGKFSFP IHAI S+ + QV +ILRQRT +++
Sbjct: 195 SKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQV------------QNILRQRTENID 242
Query: 242 VKRYCITLLEKLGSFRYTRGILNDLDARAREEVSRLGGNPQLEALLDDL 290
+K+YC+ LE +GSF YTR L +L+A+A +++ GGNP+L AL+ L
Sbjct: 243 IKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHL 291
>AB019036-1|BAA77251.1| 300|Homo sapiens geranylgeranyl
pyrophosphate synthase protein.
Length = 300
Score = 365 bits (898), Expect = e-100
Identities = 168/289 (58%), Positives = 219/289 (75%), Gaps = 12/289 (4%)
Query: 2 PYTYIQQVPGKQIRTKLASAFNYWLKISEEKLRLVGDIVQMLHNASLLIDDIQDNSILRR 61
PY Y+ Q+PGKQ+RTKL+ AFN+WLK+ E+KL+++ ++ +MLHNASLLIDDI+DNS LRR
Sbjct: 15 PYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRR 74
Query: 62 GIPVAHSIYGVASTINAANYAMIIALEKTLELGHPLATTVYTEQLLELHRGQGMEIYWRD 121
G PVAHSIYG+ S IN+ANY + LEK L L HP A ++T QLLELH+GQG++IYWRD
Sbjct: 75 GFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRD 134
Query: 122 NFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLFSENKSDFTNLSAVLGLYFQIRDDYCNLS 181
N+ CP+E+EYK M ++KTGGLF LA+ LMQLFS+ K D L LGL+FQIRDDY NL
Sbjct: 135 NYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLH 194
Query: 182 MREYTENKSYCEDLTEGKFSFPIIHAIRSQEDDKQVLHLSIISFDRTKLDILRQRTRDVE 241
+EY+ENKS+CEDLTEGKFSFP IHAI S+ + QV +ILRQRT +++
Sbjct: 195 SKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQV------------QNILRQRTENID 242
Query: 242 VKRYCITLLEKLGSFRYTRGILNDLDARAREEVSRLGGNPQLEALLDDL 290
+K+YC+ LE +GSF YTR L +L+A+A +++ GGNP+L AL+ L
Sbjct: 243 IKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHL 291
>AB017971-1|BAA75909.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase protein.
Length = 300
Score = 365 bits (898), Expect = e-100
Identities = 168/289 (58%), Positives = 219/289 (75%), Gaps = 12/289 (4%)
Query: 2 PYTYIQQVPGKQIRTKLASAFNYWLKISEEKLRLVGDIVQMLHNASLLIDDIQDNSILRR 61
PY Y+ Q+PGKQ+RTKL+ AFN+WLK+ E+KL+++ ++ +MLHNASLLIDDI+DNS LRR
Sbjct: 15 PYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRR 74
Query: 62 GIPVAHSIYGVASTINAANYAMIIALEKTLELGHPLATTVYTEQLLELHRGQGMEIYWRD 121
G PVAHSIYG+ S IN+ANY + LEK L L HP A ++T QLLELH+GQG++IYWRD
Sbjct: 75 GFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRD 134
Query: 122 NFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLFSENKSDFTNLSAVLGLYFQIRDDYCNLS 181
N+ CP+E+EYK M ++KTGGLF LA+ LMQLFS+ K D L LGL+FQIRDDY NL
Sbjct: 135 NYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLH 194
Query: 182 MREYTENKSYCEDLTEGKFSFPIIHAIRSQEDDKQVLHLSIISFDRTKLDILRQRTRDVE 241
+EY+ENKS+CEDLTEGKFSFP IHAI S+ + QV +ILRQRT +++
Sbjct: 195 SKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQV------------QNILRQRTENID 242
Query: 242 VKRYCITLLEKLGSFRYTRGILNDLDARAREEVSRLGGNPQLEALLDDL 290
+K+YC+ LE +GSF YTR L +L+A+A +++ GGNP+L AL+ L
Sbjct: 243 IKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHL 291
>AB016043-1|BAA76511.1| 300|Homo sapiens GGPP synthase protein.
Length = 300
Score = 365 bits (898), Expect = e-100
Identities = 168/289 (58%), Positives = 219/289 (75%), Gaps = 12/289 (4%)
Query: 2 PYTYIQQVPGKQIRTKLASAFNYWLKISEEKLRLVGDIVQMLHNASLLIDDIQDNSILRR 61
PY Y+ Q+PGKQ+RTKL+ AFN+WLK+ E+KL+++ ++ +MLHNASLLIDDI+DNS LRR
Sbjct: 15 PYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRR 74
Query: 62 GIPVAHSIYGVASTINAANYAMIIALEKTLELGHPLATTVYTEQLLELHRGQGMEIYWRD 121
G PVAHSIYG+ S IN+ANY + LEK L L HP A ++T QLLELH+GQG++IYWRD
Sbjct: 75 GFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRD 134
Query: 122 NFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLFSENKSDFTNLSAVLGLYFQIRDDYCNLS 181
N+ CP+E+EYK M ++KTGGLF LA+ LMQLFS+ K D L LGL+FQIRDDY NL
Sbjct: 135 NYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLH 194
Query: 182 MREYTENKSYCEDLTEGKFSFPIIHAIRSQEDDKQVLHLSIISFDRTKLDILRQRTRDVE 241
+EY+ENKS+CEDLTEGKFSFP IHAI S+ + QV +ILRQRT +++
Sbjct: 195 SKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQV------------QNILRQRTENID 242
Query: 242 VKRYCITLLEKLGSFRYTRGILNDLDARAREEVSRLGGNPQLEALLDDL 290
+K+YC+ LE +GSF YTR L +L+A+A +++ GGNP+L AL+ L
Sbjct: 243 IKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHL 291
>BC067768-1|AAH67768.1| 300|Homo sapiens GGPS1 protein protein.
Length = 300
Score = 362 bits (890), Expect = e-99
Identities = 167/289 (57%), Positives = 218/289 (75%), Gaps = 12/289 (4%)
Query: 2 PYTYIQQVPGKQIRTKLASAFNYWLKISEEKLRLVGDIVQMLHNASLLIDDIQDNSILRR 61
PY Y+ Q+PGKQ+RTKL+ AFN+WLK+ E+KL+++ ++ +MLHNASLLIDDI+DNS LRR
Sbjct: 15 PYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRR 74
Query: 62 GIPVAHSIYGVASTINAANYAMIIALEKTLELGHPLATTVYTEQLLELHRGQGMEIYWRD 121
G PVAHSIYG+ S IN+ANY + LEK L L H A ++T QLLELH+GQG++IYWRD
Sbjct: 75 GFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHQDAVKLFTRQLLELHQGQGLDIYWRD 134
Query: 122 NFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLFSENKSDFTNLSAVLGLYFQIRDDYCNLS 181
N+ CP+E+EYK M ++KTGGLF LA+ LMQLFS+ K D L LGL+FQIRDDY NL
Sbjct: 135 NYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLH 194
Query: 182 MREYTENKSYCEDLTEGKFSFPIIHAIRSQEDDKQVLHLSIISFDRTKLDILRQRTRDVE 241
+EY+ENKS+CEDLTEGKFSFP IHAI S+ + QV +ILRQRT +++
Sbjct: 195 SKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQV------------QNILRQRTENID 242
Query: 242 VKRYCITLLEKLGSFRYTRGILNDLDARAREEVSRLGGNPQLEALLDDL 290
+K+YC+ LE +GSF YTR L +L+A+A +++ GGNP+L AL+ L
Sbjct: 243 IKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHL 291
>BC049211-1|AAH49211.1| 414|Homo sapiens PDSS1 protein protein.
Length = 414
Score = 53.6 bits (123), Expect = 8e-07
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 34 RLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAMIIALEKTLEL 93
R + I +M+H ASL+ DD+ D++ RRG + I+G + A + + A +
Sbjct: 162 RAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARI 221
Query: 94 GHPLATTVYTEQLLELHRGQGMEIYWRDNFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLF 153
G+ ++ T+ + +L RG+ +++ ++N + Y + T KKT L + + + +
Sbjct: 222 GNTTVISILTQVIEDLVRGEFLQLGSKEN-ENERFAHYLEKTFKKTASLIANSCKAVSVL 280
Query: 154 SENKSDFTNLS----AVLGLYFQIRDDYCNLSMREYTENKSYCEDLTEGKFSFPIIHA 207
++ +G+ FQ+ DD + + K DL G + P++ A
Sbjct: 281 GCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFA 338
>AL390961-9|CAI17280.1| 415|Homo sapiens trans-prenyltransferase
(TPT) protein.
Length = 415
Score = 53.6 bits (123), Expect = 8e-07
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 34 RLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAMIIALEKTLEL 93
R + I +M+H ASL+ DD+ D++ RRG + I+G + A + + A +
Sbjct: 163 RAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARI 222
Query: 94 GHPLATTVYTEQLLELHRGQGMEIYWRDNFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLF 153
G+ ++ T+ + +L RG+ +++ ++N + Y + T KKT L + + + +
Sbjct: 223 GNTTVISILTQVIEDLVRGEFLQLGSKEN-ENERFAHYLEKTFKKTASLIANSCKAVSVL 281
Query: 154 SENKSDFTNLS----AVLGLYFQIRDDYCNLSMREYTENKSYCEDLTEGKFSFPIIHA 207
++ +G+ FQ+ DD + + K DL G + P++ A
Sbjct: 282 GCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFA 339
>AF118395-1|AAD28559.1| 376|Homo sapiens trans-prenyltransferase
protein.
Length = 376
Score = 53.6 bits (123), Expect = 8e-07
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 34 RLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAMIIALEKTLEL 93
R + I +M+H ASL+ DD+ D++ RRG + I+G + A + + A +
Sbjct: 124 RAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARI 183
Query: 94 GHPLATTVYTEQLLELHRGQGMEIYWRDNFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLF 153
G+ ++ T+ + +L RG+ +++ ++N + Y + T KKT L + + + +
Sbjct: 184 GNTTVISILTQVIEDLVRGEFLQLGSKEN-ENERFAHYLEKTFKKTASLIANSCKAVSVL 242
Query: 154 SENKSDFTNLS----AVLGLYFQIRDDYCNLSMREYTENKSYCEDLTEGKFSFPIIHA 207
++ +G+ FQ+ DD + + K DL G + P++ A
Sbjct: 243 GCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFA 300
>AB210838-1|BAE48216.1| 415|Homo sapiens subunit 1 of decaprenyl
diphosphate synthase protein.
Length = 415
Score = 53.6 bits (123), Expect = 8e-07
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 34 RLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAMIIALEKTLEL 93
R + I +M+H ASL+ DD+ D++ RRG + I+G + A + + A +
Sbjct: 163 RAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARI 222
Query: 94 GHPLATTVYTEQLLELHRGQGMEIYWRDNFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLF 153
G+ ++ T+ + +L RG+ +++ ++N + Y + T KKT L + + + +
Sbjct: 223 GNTTVISILTQVIEDLVRGEFLQLGSKEN-ENERFAHYLEKTFKKTASLIANSCKAVSVL 281
Query: 154 SENKSDFTNLS----AVLGLYFQIRDDYCNLSMREYTENKSYCEDLTEGKFSFPIIHA 207
++ +G+ FQ+ DD + + K DL G + P++ A
Sbjct: 282 GCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFA 339
>AK223414-1|BAD97134.1| 415|Homo sapiens trans-prenyltransferase
variant protein.
Length = 415
Score = 52.4 bits (120), Expect = 2e-06
Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 5/178 (2%)
Query: 34 RLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAMIIALEKTLEL 93
R + I +M+H ASL+ DD+ D+ RRG + I+G + A + + A +
Sbjct: 163 RAIALIAEMIHTASLVHDDVIDDVSSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARI 222
Query: 94 GHPLATTVYTEQLLELHRGQGMEIYWRDNFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLF 153
G+ ++ T+ + +L RG+ +++ ++N + Y + T KKT L + + + +
Sbjct: 223 GNTTVISILTQVIEDLVRGEFLQLGSKEN-ENERFAHYLEKTFKKTASLIANSCKAVSVL 281
Query: 154 SENKSDFTNLS----AVLGLYFQIRDDYCNLSMREYTENKSYCEDLTEGKFSFPIIHA 207
++ +G+ FQ+ DD + + K DL G + P++ A
Sbjct: 282 GCPDPVVHEIAYQYGKDVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFA 339
>AB209763-1|BAD93000.1| 297|Homo sapiens trans-prenyltransferase
variant protein.
Length = 297
Score = 51.2 bits (117), Expect = 4e-06
Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 34 RLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAMIIALEKTLEL 93
R + I +M+H ASL+ DD+ D++ RRG + I+G + A + + A +
Sbjct: 170 RAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARI 229
Query: 94 GHPLATTVYTEQLLELHRGQGMEIYWRDNFQCPSEDEYKQMTIKKTGGLFMLAIRLMQLF 153
G+ ++ T+ + +L RG+ +++ ++N + Y + T KKT L + + + L
Sbjct: 230 GNTTVISILTQVIEDLVRGEFLQLGSKEN-ENERFAHYLEKTFKKTASLIANSCKAVCLC 288
Query: 154 S 154
S
Sbjct: 289 S 289
>BC063635-1|AAH63635.1| 306|Homo sapiens PDSS1 protein protein.
Length = 306
Score = 50.8 bits (116), Expect = 6e-06
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 34 RLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAMIIALEKTLEL 93
R + I +M+H ASL+ DD+ D++ RRG + I+G + A + + A +
Sbjct: 163 RAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARI 222
Query: 94 GHPLATTVYTEQLLELHRGQGMEIYWRDNFQCPSEDEYKQMTIKKTGGL 142
G+ ++ T+ + +L RG+ +++ ++N + Y + T KKT L
Sbjct: 223 GNTTVISILTQVIEDLVRGEFLQLGSKEN-ENERFAHYLEKTFKKTASL 270
>J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein.
Length = 353
Score = 36.7 bits (81), Expect = 0.10
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 18/200 (9%)
Query: 36 VGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVA-STINAANY--AMIIALEKTLE 92
VG V++L L+ DDI D+S+ RRG + GV IN AN A I L K
Sbjct: 88 VGWCVELLQAFFLVADDIMDSSLTRRGQTCWYQKPGVGLDAINDANLLEACIYRLLKLYC 147
Query: 93 LGHPL---ATTVYTEQLLELHRGQGMEIYWRDNFQCP----SEDEYKQMTIKKTGGL-FM 144
P ++ + + GQ +++ +E YK + KT F
Sbjct: 148 REQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFY 207
Query: 145 LAIRLMQLFS--ENKSDFTNLSAVL---GLYFQIRDDYCNLSMREYTENKSYCEDLTEGK 199
L I + + + + N +L G +FQI+DDY +L + + D+ + K
Sbjct: 208 LPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDL-FGDPSVTGKIGTDIQDNK 266
Query: 200 FSFPIIHAI-RSQEDDKQVL 218
S+ ++ + R+ + Q+L
Sbjct: 267 CSWLVVQCLQRATPEQYQIL 286
>M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl
pyrophosphate synthetase mRNA (hpt807), 3' end. ).
Length = 346
Score = 35.9 bits (79), Expect = 0.18
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 18/200 (9%)
Query: 36 VGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVA-STINAANY--AMIIALEKTLE 92
VG V++L L+ DDI D+S+ RRG + GV IN AN A I L K
Sbjct: 81 VGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYC 140
Query: 93 LGHPL---ATTVYTEQLLELHRGQGMEIYWRDNFQCP----SEDEYKQMTIKKTGGL-FM 144
P ++ + + GQ +++ +E YK + KT F
Sbjct: 141 REQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFY 200
Query: 145 LAIRLMQLFS--ENKSDFTNLSAVL---GLYFQIRDDYCNLSMREYTENKSYCEDLTEGK 199
L I + + + + N +L G +FQI+DDY +L + + D+ + K
Sbjct: 201 LPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDL-FGDPSVTGKIGTDIQDNK 259
Query: 200 FSFPIIHAI-RSQEDDKQVL 218
S+ ++ + R+ + Q+L
Sbjct: 260 CSWLVVQCLQRATPEQYQIL 279
>D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein.
Length = 420
Score = 35.9 bits (79), Expect = 0.18
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 18/200 (9%)
Query: 36 VGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVA-STINAANY--AMIIALEKTLE 92
VG V++L L+ DDI D+S+ RRG + GV IN AN A I L K
Sbjct: 155 VGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYC 214
Query: 93 LGHPL---ATTVYTEQLLELHRGQGMEIYWRDNFQCP----SEDEYKQMTIKKTGGL-FM 144
P ++ + + GQ +++ +E YK + KT F
Sbjct: 215 REQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFY 274
Query: 145 LAIRLMQLFS--ENKSDFTNLSAVL---GLYFQIRDDYCNLSMREYTENKSYCEDLTEGK 199
L I + + + + N +L G +FQI+DDY +L + + D+ + K
Sbjct: 275 LPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDL-FGDPSVTGKIGTDIQDNK 333
Query: 200 FSFPIIHAI-RSQEDDKQVL 218
S+ ++ + R+ + Q+L
Sbjct: 334 CSWLVVQCLQRATPEQYQIL 353
>BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 35.9 bits (79), Expect = 0.18
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 18/200 (9%)
Query: 36 VGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVA-STINAANY--AMIIALEKTLE 92
VG V++L L+ DDI D+S+ RRG + GV IN AN A I L K
Sbjct: 154 VGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYC 213
Query: 93 LGHPL---ATTVYTEQLLELHRGQGMEIYWRDNFQCP----SEDEYKQMTIKKTGGL-FM 144
P ++ + + GQ +++ +E YK + KT F
Sbjct: 214 REQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFY 273
Query: 145 LAIRLMQLFS--ENKSDFTNLSAVL---GLYFQIRDDYCNLSMREYTENKSYCEDLTEGK 199
L I + + + + N +L G +FQI+DDY +L + + D+ + K
Sbjct: 274 LPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDL-FGDPSVTGKIGTDIQDNK 332
Query: 200 FSFPIIHAI-RSQEDDKQVL 218
S+ ++ + R+ + Q+L
Sbjct: 333 CSWLVVQCLQRATPEQYQIL 352
>AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 35.9 bits (79), Expect = 0.18
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 18/200 (9%)
Query: 36 VGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVA-STINAANY--AMIIALEKTLE 92
VG V++L L+ DDI D+S+ RRG + GV IN AN A I L K
Sbjct: 154 VGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYC 213
Query: 93 LGHPL---ATTVYTEQLLELHRGQGMEIYWRDNFQCP----SEDEYKQMTIKKTGGL-FM 144
P ++ + + GQ +++ +E YK + KT F
Sbjct: 214 REQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFY 273
Query: 145 LAIRLMQLFS--ENKSDFTNLSAVL---GLYFQIRDDYCNLSMREYTENKSYCEDLTEGK 199
L I + + + + N +L G +FQI+DDY +L + + D+ + K
Sbjct: 274 LPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDL-FGDPSVTGKIGTDIQDNK 332
Query: 200 FSFPIIHAI-RSQEDDKQVL 218
S+ ++ + R+ + Q+L
Sbjct: 333 CSWLVVQCLQRATPEQYQIL 352
>Z25884-1|CAA81103.1| 988|Homo sapiens human ClC-1 muscle chloride
channel protein.
Length = 988
Score = 31.5 bits (68), Expect = 3.8
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 34 RLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAM---IIALEKT 90
RLVG+I+ ML +L DD I+ + +P +++ G A+ A ++ + +I E T
Sbjct: 496 RLVGEIMAMLFPDGILFDD-----IIYKILPGGYAVIGAAALTGAVSHTVSTAVICFELT 550
Query: 91 LELGHPLATTV 101
++ H L V
Sbjct: 551 GQIAHILPMMV 561
>Z25753-1|CAB56792.1| 703|Homo sapiens skeletal muscle chloride
channel protein protein.
Length = 703
Score = 31.5 bits (68), Expect = 3.8
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 34 RLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAM---IIALEKT 90
RLVG+I+ ML +L DD I+ + +P +++ G A+ A ++ + +I E T
Sbjct: 211 RLVGEIMAMLFPDGILFDD-----IIYKILPGGYAVIGAAALTGAVSHTVSTAVICFELT 265
Query: 91 LELGHPLATTV 101
++ H L V
Sbjct: 266 GQIAHILPMMV 276
>Z25587-1|CAA80996.1| 988|Homo sapiens human ClC-1 muscle chloride
channel protein.
Length = 988
Score = 31.5 bits (68), Expect = 3.8
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 34 RLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAM---IIALEKT 90
RLVG+I+ ML +L DD I+ + +P +++ G A+ A ++ + +I E T
Sbjct: 496 RLVGEIMAMLFPDGILFDD-----IIYKILPGGYAVIGAAALTGAVSHTVSTAVICFELT 550
Query: 91 LELGHPLATTV 101
++ H L V
Sbjct: 551 GQIAHILPMMV 561
>BC113495-1|AAI13496.1| 988|Homo sapiens chloride channel 1,
skeletal muscle (Thomsen disease, autosomal dominant)
protein.
Length = 988
Score = 31.5 bits (68), Expect = 3.8
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 34 RLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAM---IIALEKT 90
RLVG+I+ ML +L DD I+ + +P +++ G A+ A ++ + +I E T
Sbjct: 496 RLVGEIMAMLFPDGILFDD-----IIYKILPGGYAVIGAAALTGAVSHTVSTAVICFELT 550
Query: 91 LELGHPLATTV 101
++ H L V
Sbjct: 551 GQIAHILPMMV 561
>BC112156-1|AAI12157.1| 988|Homo sapiens chloride channel 1,
skeletal muscle (Thomsen disease, autosomal dominant)
protein.
Length = 988
Score = 31.5 bits (68), Expect = 3.8
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 34 RLVGDIVQMLHNASLLIDDIQDNSILRRGIPVAHSIYGVASTINAANYAM---IIALEKT 90
RLVG+I+ ML +L DD I+ + +P +++ G A+ A ++ + +I E T
Sbjct: 496 RLVGEIMAMLFPDGILFDD-----IIYKILPGGYAVIGAAALTGAVSHTVSTAVICFELT 550
Query: 91 LELGHPLATTV 101
++ H L V
Sbjct: 551 GQIAHILPMMV 561
>AF111783-1|AAD29949.1| 1939|Homo sapiens myosin heavy chain IIb
protein.
Length = 1939
Score = 30.7 bits (66), Expect = 6.7
Identities = 22/107 (20%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 199 KFSFPIIHAIRSQEDDKQVLHLSIISFDRTKLDILRQRTRDVEVKRYCITLLEKLGSFRY 258
K F I ++S E +K++ ++ F++TK ++ + + E++ +TL+++ +
Sbjct: 835 KLYFKIKPLLKSAETEKEMANMKE-EFEKTKEELAKTEAKRKELEEKMVTLMQEKNDLQL 893
Query: 259 TRGILNDLDARAREEVSRL-GGNPQLEALLDDLLTWRQEGDDANDQM 304
D A A E +L QLEA + ++ ++ ++ N ++
Sbjct: 894 QVQAEADALADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAEL 940
>BC114545-1|AAI14546.1| 1939|Homo sapiens myosin, heavy chain 1,
skeletal muscle, adult protein.
Length = 1939
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/107 (20%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 199 KFSFPIIHAIRSQEDDKQVLHLSIISFDRTKLDILRQRTRDVEVKRYCITLLEKLGSFRY 258
K F I ++S E +K++ ++ F++TK ++ + + E++ +TL+++ +
Sbjct: 835 KLYFKIKPLLKSAETEKEMANMKE-EFEKTKEELAKTEAKRKELEEKMVTLMQEKNDLQL 893
Query: 259 TRGILNDLDARAREEVSRL-GGNPQLEALLDDLLTWRQEGDDANDQM 304
D A A E +L QLEA + ++ ++ ++ N ++
Sbjct: 894 QVQAEADSLADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAEL 940
>AF111785-1|AAD29951.1| 1939|Homo sapiens myosin heavy chain IIx/d
protein.
Length = 1939
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/107 (20%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 199 KFSFPIIHAIRSQEDDKQVLHLSIISFDRTKLDILRQRTRDVEVKRYCITLLEKLGSFRY 258
K F I ++S E +K++ ++ F++TK ++ + + E++ +TL+++ +
Sbjct: 835 KLYFKIKPLLKSAETEKEMANMKE-EFEKTKEELAKTEAKRKELEEKMVTLMQEKNDLQL 893
Query: 259 TRGILNDLDARAREEVSRL-GGNPQLEALLDDLLTWRQEGDDANDQM 304
D A A E +L QLEA + ++ ++ ++ N ++
Sbjct: 894 QVQAEADSLADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAEL 940
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.137 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,943,156
Number of Sequences: 224733
Number of extensions: 1606092
Number of successful extensions: 3097
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3069
Number of HSP's gapped (non-prelim): 28
length of query: 307
length of database: 73,234,838
effective HSP length: 90
effective length of query: 217
effective length of database: 53,008,868
effective search space: 11502924356
effective search space used: 11502924356
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
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