GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002399-TA|BGIBMGA002399-PA|undefined
         (118 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    20   5.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   5.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   5.5  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            20   7.3  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 18  LSVRRWWCFLLSSIFTFLAGLLVVLLWRACAF 49
           L +RR +   L  IFTF+  L + L ++ C F
Sbjct: 435 LGMRRNFRKKLDFIFTFITLLTIGLYFQLCEF 466


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
          growth factor 2 protein.
          Length = 439

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 72 RQGKQEFEGTFMTEAKDWAGELISG 96
          RQG+ +FE T +  A  +   LI G
Sbjct: 37 RQGQAKFEITDLEPALQYCTHLIYG 61


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 23  WWCFLLSSIFTFLAGLLVVLLWRACAFVCCHKE 55
           W C     +   L+ +  V+L + CAFV   K+
Sbjct: 161 WRCLYRWIVLYTLSKMSQVMLIQFCAFVVVLKQ 193


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)

Query: 26  FLLSSIFTFLAGL 38
           FL +  FTF+AGL
Sbjct: 467 FLFTQKFTFVAGL 479


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 56  PELAPNDPKQKEQKAARQGKQEFEGT 81
           PE      K+  +K+++QG  EF  T
Sbjct: 113 PEYPWMKEKKTTRKSSQQGNFEFRNT 138


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.134    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,360
Number of Sequences: 317
Number of extensions: 1013
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 118
length of database: 114,650
effective HSP length: 50
effective length of query: 68
effective length of database: 98,800
effective search space:  6718400
effective search space used:  6718400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.6 bits)
S2: 38 (19.4 bits)