Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002399-TA|BGIBMGA002399-PA|undefined
(118 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical... 84 3e-17
AL021497-15|CAD27617.1| 1118|Caenorhabditis elegans Hypothetical... 84 3e-17
AL021497-14|CAB54459.2| 1140|Caenorhabditis elegans Hypothetical... 84 3e-17
AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans large-conduct... 84 3e-17
AF431892-1|AAL28103.1| 1118|Caenorhabditis elegans large-conduct... 84 3e-17
AF431891-1|AAL28102.1| 1140|Caenorhabditis elegans large-conduct... 84 3e-17
L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z74031-12|CAA98450.1| 399|Caenorhabditis elegans Hypothetical p... 27 4.5
U55373-12|AAC25891.1| 151|Caenorhabditis elegans Hypothetical p... 27 4.5
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 27 4.5
AF000194-3|AAK39379.1| 191|Caenorhabditis elegans Hypothetical ... 27 4.5
Z70756-12|CAA94793.2| 368|Caenorhabditis elegans Hypothetical p... 26 6.0
U42844-1|ABD63246.1| 139|Caenorhabditis elegans Hypothetical pr... 26 6.0
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 26 6.0
AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical ... 26 6.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 26 7.9
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 26 7.9
U42437-2|AAW88401.1| 294|Caenorhabditis elegans Hypothetical pr... 26 7.9
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 26 7.9
>AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical
protein Y51A2D.19c protein.
Length = 1131
Score = 83.8 bits (198), Expect = 3e-17
Identities = 49/106 (46%), Positives = 62/106 (58%), Gaps = 15/106 (14%)
Query: 17 CLSVRRWWCFLLSSIFTFLAGLLVVLLWRACAFVCCHK------EPELAP-------NDP 63
CL R++WCFLLSSI TF A +++V++WR +CC + EP AP N
Sbjct: 39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98
Query: 64 KQKEQKAARQGKQEFEG--TFMTEAKDWAGELISGQTTTGRILVSL 107
K + KQ+ E +MTEAKDWAGELISGQ+ TGR LV L
Sbjct: 99 KHAPSETDPFLKQQEEKHLGWMTEAKDWAGELISGQSLTGRFLVLL 144
>AL021497-15|CAD27617.1| 1118|Caenorhabditis elegans Hypothetical
protein Y51A2D.19b protein.
Length = 1118
Score = 83.8 bits (198), Expect = 3e-17
Identities = 49/106 (46%), Positives = 62/106 (58%), Gaps = 15/106 (14%)
Query: 17 CLSVRRWWCFLLSSIFTFLAGLLVVLLWRACAFVCCHK------EPELAP-------NDP 63
CL R++WCFLLSSI TF A +++V++WR +CC + EP AP N
Sbjct: 39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98
Query: 64 KQKEQKAARQGKQEFEG--TFMTEAKDWAGELISGQTTTGRILVSL 107
K + KQ+ E +MTEAKDWAGELISGQ+ TGR LV L
Sbjct: 99 KHAPSETDPFLKQQEEKHLGWMTEAKDWAGELISGQSLTGRFLVLL 144
>AL021497-14|CAB54459.2| 1140|Caenorhabditis elegans Hypothetical
protein Y51A2D.19a protein.
Length = 1140
Score = 83.8 bits (198), Expect = 3e-17
Identities = 49/106 (46%), Positives = 62/106 (58%), Gaps = 15/106 (14%)
Query: 17 CLSVRRWWCFLLSSIFTFLAGLLVVLLWRACAFVCCHK------EPELAP-------NDP 63
CL R++WCFLLSSI TF A +++V++WR +CC + EP AP N
Sbjct: 39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98
Query: 64 KQKEQKAARQGKQEFEG--TFMTEAKDWAGELISGQTTTGRILVSL 107
K + KQ+ E +MTEAKDWAGELISGQ+ TGR LV L
Sbjct: 99 KHAPSETDPFLKQQEEKHLGWMTEAKDWAGELISGQSLTGRFLVLL 144
>AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans
large-conductance calcium-activatedpotassium channel
SLO-1c protein.
Length = 1131
Score = 83.8 bits (198), Expect = 3e-17
Identities = 49/106 (46%), Positives = 62/106 (58%), Gaps = 15/106 (14%)
Query: 17 CLSVRRWWCFLLSSIFTFLAGLLVVLLWRACAFVCCHK------EPELAP-------NDP 63
CL R++WCFLLSSI TF A +++V++WR +CC + EP AP N
Sbjct: 39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98
Query: 64 KQKEQKAARQGKQEFEG--TFMTEAKDWAGELISGQTTTGRILVSL 107
K + KQ+ E +MTEAKDWAGELISGQ+ TGR LV L
Sbjct: 99 KHAPSETDPFLKQQEEKHLGWMTEAKDWAGELISGQSLTGRFLVLL 144
>AF431892-1|AAL28103.1| 1118|Caenorhabditis elegans
large-conductance calcium-activatedpotassium channel
SLO-1b protein.
Length = 1118
Score = 83.8 bits (198), Expect = 3e-17
Identities = 49/106 (46%), Positives = 62/106 (58%), Gaps = 15/106 (14%)
Query: 17 CLSVRRWWCFLLSSIFTFLAGLLVVLLWRACAFVCCHK------EPELAP-------NDP 63
CL R++WCFLLSSI TF A +++V++WR +CC + EP AP N
Sbjct: 39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98
Query: 64 KQKEQKAARQGKQEFEG--TFMTEAKDWAGELISGQTTTGRILVSL 107
K + KQ+ E +MTEAKDWAGELISGQ+ TGR LV L
Sbjct: 99 KHAPSETDPFLKQQEEKHLGWMTEAKDWAGELISGQSLTGRFLVLL 144
>AF431891-1|AAL28102.1| 1140|Caenorhabditis elegans
large-conductance calcium-activatedpotassium channel
SLO-1a protein.
Length = 1140
Score = 83.8 bits (198), Expect = 3e-17
Identities = 49/106 (46%), Positives = 62/106 (58%), Gaps = 15/106 (14%)
Query: 17 CLSVRRWWCFLLSSIFTFLAGLLVVLLWRACAFVCCHK------EPELAP-------NDP 63
CL R++WCFLLSSI TF A +++V++WR +CC + EP AP N
Sbjct: 39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98
Query: 64 KQKEQKAARQGKQEFEG--TFMTEAKDWAGELISGQTTTGRILVSL 107
K + KQ+ E +MTEAKDWAGELISGQ+ TGR LV L
Sbjct: 99 KHAPSETDPFLKQQEEKHLGWMTEAKDWAGELISGQSLTGRFLVLL 144
>L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical protein
F54F2.1 protein.
Length = 1226
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 23 WWCFLLSSIFTF-LAGLLVVLLWRACAFVCCHKEP 56
WW +LL+ + + LL++LLWR C F ++ P
Sbjct: 1155 WWLYLLAILIGLAILILLILLLWR-CGFFKRNRPP 1188
>Z74031-12|CAA98450.1| 399|Caenorhabditis elegans Hypothetical
protein F32D8.10 protein.
Length = 399
Score = 26.6 bits (56), Expect = 4.5
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 15 YDCLSVRRWWCFLLSSIFTFLAGLLVVLLWRACAFVCCHKEPEL----APNDPKQKEQKA 70
+D + +W F +IFT LA ++LL C + +E L A +D + ++K
Sbjct: 211 FDFPKINEYWRFYFRNIFTILAPFFILLLVN-CLLLFQLREHVLKSKCADHDKQNVKEKK 269
Query: 71 AR 72
AR
Sbjct: 270 AR 271
>U55373-12|AAC25891.1| 151|Caenorhabditis elegans Hypothetical
protein F26F12.4 protein.
Length = 151
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 28 LSSIFTFLAGLLVVLLWRACAFVCCHKEPELAPNDPKQKEQKAA 71
++ ++ LA +L+V + C +CC++ + N +++E +AA
Sbjct: 85 MAGVYVLLAFVLLVFVVGTCLMICCYQR---SKNRQRKEELEAA 125
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 28 LSSIFTFLAGLLVVLLWRACAFVCCHK 54
L IF FL GLLV+ + CA+ CHK
Sbjct: 3 LQVIFLFL-GLLVIYSSQDCAWNTCHK 28
>AF000194-3|AAK39379.1| 191|Caenorhabditis elegans Hypothetical
protein ZC328.5 protein.
Length = 191
Score = 26.6 bits (56), Expect = 4.5
Identities = 22/75 (29%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 31 IFTFLAGLLVVLLWRACAFVCCHKEPELAPNDPKQKEQKAARQGKQEFEGTF--MTEAKD 88
IFTFLA L + A C K P P E R K F M E +D
Sbjct: 5 IFTFLALLAAAINIGEGAKPCRAKRPTTEPPSTTTVESSTTRDSKAPCMAVFENMKEEED 64
Query: 89 WAGELISGQTTTGRI 103
+ G TT +
Sbjct: 65 GFEDYAMGVTTAASV 79
>Z70756-12|CAA94793.2| 368|Caenorhabditis elegans Hypothetical
protein T06E4.7 protein.
Length = 368
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 18 LSVRRWWCFLLSSIFTFLAGLLVVL 42
LS W+C++ + I FL G+L+ L
Sbjct: 2 LSFFSWYCYICNGIAIFLNGILLFL 26
>U42844-1|ABD63246.1| 139|Caenorhabditis elegans Hypothetical
protein C08A9.10 protein.
Length = 139
Score = 26.2 bits (55), Expect = 6.0
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 6 EEATTPNPNYDCL 18
+++T+ NPNYDCL
Sbjct: 38 QDSTSQNPNYDCL 50
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 61 NDPKQKEQKAARQGKQEF 78
N PKQK++KA QG+++F
Sbjct: 527 NKPKQKKKKAQGQGQKKF 544
>AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical
protein Y63D3A.6a protein.
Length = 579
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 61 NDPKQKEQKAARQGKQEF 78
N PKQK++KA QG+++F
Sbjct: 527 NKPKQKKKKAQGQGQKKF 544
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 54 KEPELAPNDPKQKEQKAARQGKQEFEGTFMTEAKD 88
+E E +PK++E+K + K+E E E KD
Sbjct: 307 EEDEKKDEEPKKEEEKKEEEQKEEVEKKEEEEKKD 341
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 54 KEPELAPNDPKQKEQKAARQGKQEFEGTFMTEAKD 88
KE E P++P K +K+ ++ K + EG+ E+KD
Sbjct: 81 KEVEKKPDEPA-KSKKSEKKEKSKNEGSKKEESKD 114
>U42437-2|AAW88401.1| 294|Caenorhabditis elegans Hypothetical
protein F30B5.8 protein.
Length = 294
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 23 WWCFLLSSIFTFLAGLLVVLLWRACAFVCCHK 54
+W F ++ ++ L VVL++R + CC K
Sbjct: 171 FWMFREKLVYVCISTLSVVLVFRLFVWKCCSK 202
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 52 CHKEPELAPNDPKQKEQKAARQGKQEFEGT 81
C K +LA ++ E+KAA++ +QE T
Sbjct: 368 CSKNKQLADERARKHEEKAAKKREQEAAAT 397
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.134 0.439
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,024,861
Number of Sequences: 27539
Number of extensions: 108500
Number of successful extensions: 320
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 298
Number of HSP's gapped (non-prelim): 20
length of query: 118
length of database: 12,573,161
effective HSP length: 73
effective length of query: 45
effective length of database: 10,562,814
effective search space: 475326630
effective search space used: 475326630
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 54 (25.8 bits)
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