GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002398-TA|BGIBMGA002398-PA|IPR004323|CutA1 divalent ion
tolerance protein
         (182 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118865-1|AAM50725.1|  198|Drosophila melanogaster GM24986p pro...   135   4e-32
AE014298-2009|AAF48350.1|  198|Drosophila melanogaster CG11590-P...   135   4e-32

>AY118865-1|AAM50725.1|  198|Drosophila melanogaster GM24986p
           protein.
          Length = 198

 Score =  135 bits (326), Expect = 4e-32
 Identities = 58/101 (57%), Positives = 77/101 (76%)

Query: 81  SVVYVTVPNDEVGRTIGHGLVKNKLAACVNSIPGITSIYEWKNEINEDKETLLMIKTRTS 140
           SV +VT P+ E  R +G  +V+ KLAACVN +  + SIY+W+ EI+ED E LLMIKTRTS
Sbjct: 91  SVAFVTTPDRESARKLGRSIVELKLAACVNIVSQVESIYKWEGEISEDSEYLLMIKTRTS 150

Query: 141 QVDKLTEYVRSNHPYEVCEVISVPIKNGNPPYLKWIGDIVP 181
           ++D L++++R NHPY V EVI++PI+NGNPPYL WI   VP
Sbjct: 151 RIDDLSKFIRENHPYSVAEVIALPIQNGNPPYLDWIAQTVP 191


>AE014298-2009|AAF48350.1|  198|Drosophila melanogaster CG11590-PA
           protein.
          Length = 198

 Score =  135 bits (326), Expect = 4e-32
 Identities = 58/101 (57%), Positives = 77/101 (76%)

Query: 81  SVVYVTVPNDEVGRTIGHGLVKNKLAACVNSIPGITSIYEWKNEINEDKETLLMIKTRTS 140
           SV +VT P+ E  R +G  +V+ KLAACVN +  + SIY+W+ EI+ED E LLMIKTRTS
Sbjct: 91  SVAFVTTPDRESARKLGRSIVELKLAACVNIVSQVESIYKWEGEISEDSEYLLMIKTRTS 150

Query: 141 QVDKLTEYVRSNHPYEVCEVISVPIKNGNPPYLKWIGDIVP 181
           ++D L++++R NHPY V EVI++PI+NGNPPYL WI   VP
Sbjct: 151 RIDDLSKFIRENHPYSVAEVIALPIQNGNPPYLDWIAQTVP 191


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.314    0.133    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,153,668
Number of Sequences: 52641
Number of extensions: 280076
Number of successful extensions: 447
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 445
Number of HSP's gapped (non-prelim): 2
length of query: 182
length of database: 24,830,863
effective HSP length: 81
effective length of query: 101
effective length of database: 20,566,942
effective search space: 2077261142
effective search space used: 2077261142
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)