GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002397-TA|BGIBMGA002397-PA|undefined
         (264 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   3.9  
AF515527-1|AAM61894.1|  211|Anopheles gambiae glutathione S-tran...    24   3.9  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.0  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   9.0  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   9.0  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   9.0  

>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 4   SAYKYRQNDQQDSPHSHPQKYLADEP 29
           + +KYR      +P SHP  + A EP
Sbjct: 213 TGWKYRSISSLHAPPSHPGAHRAAEP 238


>AF515527-1|AAM61894.1|  211|Anopheles gambiae glutathione
           S-transferase D10 protein.
          Length = 211

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 100 VNPYVPEIPESCKKIGICDKIPNY 123
           VNP++PE+ E  +K      IP +
Sbjct: 31  VNPHLPEVREQLRKFNPQHTIPTF 54


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 14/87 (16%), Positives = 37/87 (42%)

Query: 116 ICDKIPNYPREQVEKIVAKLGEKTEFQFDKLDLPSIPDIAQRAGSFEDSYELCDFRVQIM 175
           I + + N   +   +  A++G     QF++ +L    + A++   FE   +  +  ++  
Sbjct: 777 IKESMNNVEDDVYAEFCARIGVANIRQFEERELVLQQERAKKRAEFEQQIDRINNNLEFE 836

Query: 176 TPLAAQSDDLKWYHVLNFNENPLQGFR 202
                  +  +W   +  +E+ L+ F+
Sbjct: 837 RSKDTSKNVQRWERAVQDDEDSLETFK 863


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical
          protein protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 11 NDQQDSPHSHPQKYLADEPNRMSERSIHNTDHNQRLQSRSS 51
          +  + SP    Q + AD P+  + +S     H+    S SS
Sbjct: 18 SSSKPSPQQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSS 58


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical
          protein protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 11 NDQQDSPHSHPQKYLADEPNRMSERSIHNTDHNQRLQSRSS 51
          +  + SP    Q + AD P+  + +S     H+    S SS
Sbjct: 18 SSSKPSPQQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSS 58


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 146 LDLPSIPDIAQRAGSFEDSYELCDFR 171
           L+LP++ DI   +  F ++Y LC  +
Sbjct: 104 LELPALRDILGGSVGFFNNYNLCHMK 129


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.133    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 288,201
Number of Sequences: 2123
Number of extensions: 11969
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 6
length of query: 264
length of database: 516,269
effective HSP length: 63
effective length of query: 201
effective length of database: 382,520
effective search space: 76886520
effective search space used: 76886520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)