GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002396-TA|BGIBMGA002396-PA|undefined
         (218 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   1.0  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   9.4  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   9.4  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    23   9.4  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 2/27 (7%)

Query: 128 LFLVRSRSGDWRTVVQAPEK-NYLQKV 153
           +FL++ ++G+W TV  APEK NY  ++
Sbjct: 862 IFLLQ-QNGEWVTVKAAPEKVNYFNEI 887


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 23/105 (21%), Positives = 38/105 (36%)

Query: 53  VGNRYGSPDSGVPEECRDKNFCTIKPPDYPQARFNDMFKDTEYEPQPNLVIEAFGDRQGD 112
           VG   G+      E   + N  T++    P ++     + ++   QP  +  +    QG+
Sbjct: 408 VGGNRGAGGGWRSERTCNGNNDTVQETLIPSSQVLPSSRSSQPHQQPQQLSSSSSQGQGN 467

Query: 113 PDAEDNCPTDITFEPLFLVRSRSGDWRTVVQAPEKNYLQKVRLET 157
               D+        PL L    +G     VQ+ E   L    LET
Sbjct: 468 QPTVDSILLSEVVPPLSLPPPLTGAMLPSVQSAETVILPSGVLET 512


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 190 VDDGKNGTETIQSELPICCSCHYKIKERK 218
           VD+ K+     +SEL IC   H ++ ER+
Sbjct: 480 VDESKSALSIAESELKIC--QHDEVTERR 506


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 29  AKELDRKQREKDYVPLKYPGPIQDV 53
           A+EL+ +Q+E DY+     G +Q V
Sbjct: 116 AEELEERQQELDYLKRYLVGRLQAV 140


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.138    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 272,239
Number of Sequences: 2123
Number of extensions: 12581
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 4
length of query: 218
length of database: 516,269
effective HSP length: 61
effective length of query: 157
effective length of database: 386,766
effective search space: 60722262
effective search space used: 60722262
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)