GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002395-TA|BGIBMGA002395-PA|undefined
         (180 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC120872-1|AAI20873.1| 1857|Homo sapiens maltase-glucoamylase (a...    32   0.98 
AF432202-1|AAL83560.1| 1734|Homo sapiens maltase-glucoamylase pr...    32   0.98 
AF016833-1|AAC39568.2| 1857|Homo sapiens maltase-glucoamylase pr...    32   0.98 

>BC120872-1|AAI20873.1| 1857|Homo sapiens maltase-glucoamylase
            (alpha-glucosidase) protein.
          Length = 1857

 Score = 32.3 bits (70), Expect = 0.98
 Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 60   ETYSDEAGQNSTGIIG-GCHWITEKTAGTPFLYLVPFLF------VNHHVWEDSNDLREK 112
            + Y DE G ++      GC W    ++G PF Y V  L+       N H       L+  
Sbjct: 965  DCYPDENGASAENCTARGCIWEASNSSGVPFCYFVNDLYSVSDVQYNSHGATADISLKSS 1024

Query: 113  TKESCYEEFGLNKLGLSSVCKESYRLNKIYFYDPDRN 149
               + +    +N L L  V      + +   YDP++N
Sbjct: 1025 VYANAFPSTPVNPLRL-DVTYHKNEMLQFKIYDPNKN 1060


>AF432202-1|AAL83560.1| 1734|Homo sapiens maltase-glucoamylase
           protein.
          Length = 1734

 Score = 32.3 bits (70), Expect = 0.98
 Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 60  ETYSDEAGQNSTGIIG-GCHWITEKTAGTPFLYLVPFLF------VNHHVWEDSNDLREK 112
           + Y DE G ++      GC W    ++G PF Y V  L+       N H       L+  
Sbjct: 842 DCYPDENGASAENCTARGCIWEASNSSGVPFCYFVNDLYSVSDVQYNSHGATADISLKSS 901

Query: 113 TKESCYEEFGLNKLGLSSVCKESYRLNKIYFYDPDRN 149
              + +    +N L L  V      + +   YDP++N
Sbjct: 902 VYANAFPSTPVNPLRL-DVTYHKNEMLQFKIYDPNKN 937


>AF016833-1|AAC39568.2| 1857|Homo sapiens maltase-glucoamylase
            protein.
          Length = 1857

 Score = 32.3 bits (70), Expect = 0.98
 Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 60   ETYSDEAGQNSTGIIG-GCHWITEKTAGTPFLYLVPFLF------VNHHVWEDSNDLREK 112
            + Y DE G ++      GC W    ++G PF Y V  L+       N H       L+  
Sbjct: 965  DCYPDENGASAENCTARGCIWEASNSSGVPFCYFVNDLYSVSDVQYNSHGATADISLKSS 1024

Query: 113  TKESCYEEFGLNKLGLSSVCKESYRLNKIYFYDPDRN 149
               + +    +N L L  V      + +   YDP++N
Sbjct: 1025 VYANAFPSTPVNPLRL-DVTYHKNEMLQFKIYDPNKN 1060


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.138    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,371,885
Number of Sequences: 224733
Number of extensions: 1266934
Number of successful extensions: 2001
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2001
Number of HSP's gapped (non-prelim): 3
length of query: 180
length of database: 73,234,838
effective HSP length: 85
effective length of query: 95
effective length of database: 54,132,533
effective search space: 5142590635
effective search space used: 5142590635
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)