Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002394-TA|BGIBMGA002394-PA|IPR000994|Peptidase M24,
catalytic core, IPR001714|Peptidase M24, methionine aminopeptidase,
IPR002467|Peptidase M24A, methionine aminopeptidase, subfamily 1
(378 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0584 + 18971761-18971834,18971852-18973133,18973197-189745... 291 5e-79
02_05_0835 - 32099966-32100111,32100418-32100465,32100673-321007... 281 7e-76
04_04_1111 - 30979334-30979479,30979769-30979866,30980364-309804... 236 2e-62
07_03_0551 + 19374405-19374541,19375201-19375435,19375539-193757... 221 7e-58
07_03_0151 - 14465479-14465675,14466280-14466401,14466934-144670... 184 1e-46
07_01_0339 - 2443123-2443508,2443590-2443651,2443692-2443704,244... 85 9e-17
03_01_0465 + 3598815-3598972,3599949-3600711,3601073-3601159,360... 38 0.018
10_07_0177 - 13841148-13841267,13841569-13841645,13842710-138428... 37 0.023
12_02_0241 + 16190408-16191103 31 1.5
07_03_1208 - 24896905-24896931,24897330-24897341,24898058-248983... 31 2.0
05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185... 30 2.7
03_06_0239 - 32578231-32578353,32578431-32578655,32579081-325792... 30 3.5
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 29 4.6
07_01_0137 + 1005818-1006852,1007645-1007827,1008398-1008616,100... 29 8.1
>10_08_0584 + 18971761-18971834,18971852-18973133,18973197-18974509,
18993885-18993935,18994674-18994829,18995048-18995123,
18995317-18995364,18995445-18995489,18995580-18995679,
18995923-18995968,18996115-18996176,18996257-18996355,
18996536-18996609,18996721-18996790,18997074-18997162,
18997327-18997404
Length = 1220
Score = 291 bits (715), Expect = 5e-79
Identities = 161/365 (44%), Positives = 215/365 (58%), Gaps = 53/365 (14%)
Query: 12 QLQCPTCIKLGI--KGSFFCNQDCFKKSWKTHKIIH----SLAKGDNTDA-------ANV 58
+ +CP C +L + +G+ FC QDCFK++W +HK +H +L +
Sbjct: 888 EAECPKCAQLKLLREGAAFCTQDCFKEAWSSHKSVHIKLDALTLQQTPEGWQYCLKKGRT 947
Query: 59 EYNPWPSYTFTGKLRPFPAGPKRTVPPHIGRPDYADHPTGFPASEYAAKGSAQIKILDDE 118
+ P + +TG LRP+P VP I +PD+A G P E + +++I E
Sbjct: 948 RTSQLPRFDWTGPLRPYPISKMCVVPDKIEKPDWA--LDGTPKIEPDSDLQKRVEIKTPE 1005
Query: 119 EIEGMRVACRLGREVLDEAARVCDVGVSTDEIDRVVHEACIERECYPSPLNYYNFPNSCC 178
+IE MR CR+ REVLD AAR+ G++TDEIDRVVHE + R L Y+
Sbjct: 1006 QIERMRETCRIAREVLDAAARIIKPGITTDEIDRVVHEETVARG-----LKEYDM----L 1056
Query: 179 TSINEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKLVQVTHE 238
T ++ V R L+DGDI NVDVTVY++G HGDLNET+FVGNV E +++LV+ T+E
Sbjct: 1057 TLLSLVS-------RKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDEASKQLVRCTYE 1109
Query: 239 CLQKAIDIVRPGEKYREIGNVIQKHAQANGYSVVRSYCGHGIHRLFHTAPNVPHYAKNKA 298
CL KAI IV+PG ++RE+G +I +HA +G SVV+SYCGHGI LFH APN+PHY++
Sbjct: 1110 CLDKAIAIVKPGVRFREVGEIINRHASMSGLSVVKSYCGHGIGELFHCAPNIPHYSR--- 1166
Query: 299 IGIMKVGHCFTIEPMINEGGWRDEQWPDHWTAVTADGSRSAQFEQTLLVTESGCDILTKR 358
W D WPD WTAVTADG RSAQFE TLLVTE+G ++LT R
Sbjct: 1167 -------------------VWHDRLWPDEWTAVTADGKRSAQFEHTLLVTETGVEVLTAR 1207
Query: 359 NTGRP 363
P
Sbjct: 1208 LPSSP 1212
>02_05_0835 -
32099966-32100111,32100418-32100465,32100673-32100770,
32101269-32101348,32101615-32101686,32102260-32102301,
32102382-32102543,32102971-32103199,32103681-32103747,
32103907-32104003
Length = 346
Score = 281 bits (689), Expect = 7e-76
Identities = 138/287 (48%), Positives = 179/287 (62%), Gaps = 8/287 (2%)
Query: 71 KLRPFPAGPKRTVPPHIGRPDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLG 130
+LRP P+ +VP HI RP Y + A + + +I D+ IE MR + +L
Sbjct: 67 RLRPGKVSPRLSVPKHIQRPPYVN------ARQRPGLHNGP-EIHDERGIECMRASGKLA 119
Query: 131 REVLDEAARVCDVGVSTDEIDRVVHEACIERECYPSPLNYYNFPNSCCTSINEVICHGIP 190
+VL A + + G++TDEID+ VH+ ++ YPSPL Y FP S CTS+NE ICHGIP
Sbjct: 120 AQVLKFAGTLVEPGITTDEIDKAVHQMIVDNGAYPSPLGYCGFPKSVCTSVNECICHGIP 179
Query: 191 DLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKLVQVTHECLQKAIDIVRPG 250
D RPL+DGDI N+DVTVY G+HGD + TF GNV + +KLVQVT ECL KAI I PG
Sbjct: 180 DSRPLEDGDIINIDVTVYLNGYHGDTSATFLCGNVDDKAKKLVQVTRECLDKAISICAPG 239
Query: 251 EKYREIGNVIQKHAQANGYSVVRSYCGHGIHRLFHTAPNVPHYAKNKAIGIMKVGHCFTI 310
+ + IG IQ HA + VVR + GHG+ ++FH P V H+ +N G M + FTI
Sbjct: 240 VEIKRIGRTIQDHADKFKFGVVRQFVGHGVGQVFHAEPVVLHF-RNNEWGRMTLNQTFTI 298
Query: 311 EPMINEGGWRDEQWPDHWTAVTADGSRSAQFEQTLLVTESGCDILTK 357
EPM+ G W D WTAVT DGS SAQFE T+L+TE G +ILT+
Sbjct: 299 EPMLTVGSVNPVIWSDDWTAVTEDGSLSAQFEHTILITEDGAEILTQ 345
>04_04_1111 -
30979334-30979479,30979769-30979866,30980364-30980443,
30980685-30980756,30980860-30980901,30981009-30981170,
30981276-30981427,30981453-30981538,30981654-30981726,
30982706-30982889
Length = 364
Score = 236 bits (577), Expect = 2e-62
Identities = 127/310 (40%), Positives = 177/310 (57%), Gaps = 27/310 (8%)
Query: 51 DNTDAANVEYNPWPSYTFTGKLRPFPAGPKRTVPP---HIGRPDYADHPTGFPASEYAAK 107
+ + AN N + T K + + K T P HI +P Y ASE A+
Sbjct: 78 EGLEKANPSSNTCKNSKVTRKAKFGTSEEKSTTDPWDSHITQPPYVGKKD---ASEIAS- 133
Query: 108 GSAQIKILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEIDRVVHEACIERECYPSP 167
+I++ D I M+ AC L VL+ A + V+TDEID+ VH+ I+ YPSP
Sbjct: 134 ---EIQMHDKVSIIHMKAACELAARVLEYAGTLVKPSVTTDEIDKAVHKMIIDAGAYPSP 190
Query: 168 LNYYNFPNSCCTSINEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPE 227
L Y FP S CTS+NE ICHGIPD R LQDGDI N+DVTVY G+HGD ++TF G V E
Sbjct: 191 LGYGGFPKSVCTSVNECICHGIPDSRELQDGDIINIDVTVYLNGYHGDTSKTFLCGEVDE 250
Query: 228 TTRKLVQVTHECLQKAIDIVRPGEKYREIGNVIQKHAQANGYSVVRSYCGHGIHRLFHTA 287
+++LV+VT EC+ +AI + G ++IG I +HA+ +G+ VV + GHG+ R+FH+
Sbjct: 251 ASKRLVKVTEECMLRAISACKHGTSLKKIGRRISEHAERHGFGVVDRFVGHGVGRIFHSE 310
Query: 288 PNVPHYAKNKAIGIMKVGHCFTIEPMINEGGWRDEQWPDHWTAVTADGSRSAQFEQTLLV 347
P + H +P ++ G + W D WTAVT DGS +AQFE T+L+
Sbjct: 311 PMIYHQ-----------------QPALSMGSIDCDMWDDGWTAVTTDGSLAAQFEHTILI 353
Query: 348 TESGCDILTK 357
T++G +ILTK
Sbjct: 354 TKTGAEILTK 363
>07_03_0551 +
19374405-19374541,19375201-19375435,19375539-19375700,
19375778-19375819,19375941-19376012,19376291-19376370,
19376962-19377059,19377691-19377738,19377983-19378083,
19378331-19378426,19378599-19378689,19379510-19379706,
19380918-19381004,19381208-19381488,19381653-19381743
Length = 605
Score = 221 bits (540), Expect = 7e-58
Identities = 117/274 (42%), Positives = 152/274 (55%), Gaps = 8/274 (2%)
Query: 72 LRPFPAGPKRTVPPHIGRPDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLGR 131
LR P+ VP HI RP Y S + S+ +I E I GMR AC+L
Sbjct: 61 LRRGKISPQLPVPEHIPRPSYV-------GSNRPQELSSVRQIHSAEGIAGMRAACKLAA 113
Query: 132 EVLDEAARVCDVGVSTDEIDRVVHEACIERECYPSPLNYYNFPNSCCTSINEVICHGIPD 191
LD A + V+T+EIDR VH IE YPS L Y FP S CTS+NE +CHG+PD
Sbjct: 114 RALDFAGTLIKPSVTTNEIDREVHNMIIEAGAYPSQLGYGGFPKSICTSLNECVCHGVPD 173
Query: 192 LRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKLVQVTHECLQKAIDIVRPGE 251
LQ GDI NVDV V+ G+HG + TF G V ++ R ++ ECL+K I + R G
Sbjct: 174 STQLQTGDIMNVDVNVFLNGYHGGASRTFVCGEVDDSIRHFLKAAEECLEKGITVCRDGV 233
Query: 252 KYREIGNVIQKHAQANGYSVVRSYCGHGIHRLFHTAPNVPHYAKNKAIGIMKVGHCFTIE 311
Y++IG I K A GY VV + GHGI ++H+ P + H+A + + G M G FTIE
Sbjct: 234 NYKKIGKKISKLAYFYGYYVVDRFVGHGIGPIWHSEPLILHHANDNS-GRMVEGQTFTIE 292
Query: 312 PMINEGGWRDEQWPDHWTAVTADGSRSAQFEQTL 345
P++ W D WT VTADGS +AQF+ T+
Sbjct: 293 PILTMEKAETVTWEDGWTTVTADGSWAAQFKHTV 326
>07_03_0151 -
14465479-14465675,14466280-14466401,14466934-14467081,
14467146-14467167,14467299-14467393,14467395-14467438,
14467750-14467841,14467911-14467982,14468188-14468229,
14468333-14468494,14468631-14468683,14468808-14468925,
14468974-14469150,14469573-14469639,14470195-14470273,
14473805-14473862,14474257-14474346,14474429-14474540,
14474649-14474912,14475361-14475463,14476200-14476278,
14476748-14476852
Length = 766
Score = 184 bits (448), Expect = 1e-46
Identities = 99/250 (39%), Positives = 140/250 (56%), Gaps = 10/250 (4%)
Query: 116 DDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEIDRVVHEACIERECYPSPLNYYNFPN 175
D+ +E AC L VL+ A + +TDEIDR VH+ I+ YPSPL Y FP
Sbjct: 409 DEGALEARHAACELTARVLEYAGTLVKPLATTDEIDRAVHQMIIDAGAYPSPLGYGGFPK 468
Query: 176 SCCTSINEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKLVQV 235
S CTS+NE ICHGIPD R LQ+GDI N+DVTVY G+HGD + T+ G V E+T +LV+
Sbjct: 469 SVCTSVNECICHGIPDSRVLQNGDIINIDVTVYLNGYHGDTSRTYLCGEVDESTMQLVKK 528
Query: 236 THEC----LQKAIDIVRPGEKYREIG-NVIQKHAQANGYSV---VRSYCGHGIHRLFHTA 287
C + + I + G ++ IG + A N + + + ++ G + +
Sbjct: 529 LIYCSVTNMLRGISACKHGASFKTIGQRISDSPASTNNFMISDFMSTWTSTGTASIPLSD 588
Query: 288 PNVPHYA-KNKAIGIMKVGHCFTIEPMINEGGWRDEQWPDHWTAVTADGSRSAQFEQTLL 346
+ Y+ +N++ GI H +EP ++ GG + W D WTAVT D S +AQFE T+L
Sbjct: 589 MELGKYSTRNRSFGI-PARHSQLVEPTLSMGGTQCTLWDDGWTAVTVDSSLTAQFEHTIL 647
Query: 347 VTESGCDILT 356
VT G +ILT
Sbjct: 648 VTGDGAEILT 657
>07_01_0339 -
2443123-2443508,2443590-2443651,2443692-2443704,
2444483-2444495
Length = 157
Score = 85.0 bits (201), Expect = 9e-17
Identities = 37/54 (68%), Positives = 46/54 (85%)
Query: 193 RPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKLVQVTHECLQKAIDI 246
R L+DGDI NVDVTVY++G HGDLNET+FVGNV E +++LV+ T+ECL KAI I
Sbjct: 9 RKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDEASKQLVRCTYECLDKAIAI 62
>03_01_0465 +
3598815-3598972,3599949-3600711,3601073-3601159,
3601263-3601346,3601428-3601514,3601608-3601694,
3602239-3602292,3602380-3602471,3602564-3602678,
3602763-3602913,3603010-3603155
Length = 607
Score = 37.5 bits (83), Expect = 0.018
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 11 AQLQCPTCIK--LGIKGSFFCNQDCFKKSWKTHKIIHSLAKGDNTDAANVE 59
A +QC C+K + + S+ C+ CF +W+ H+++H A + N E
Sbjct: 73 ATIQCLGCLKSKIPVAKSYHCSAKCFSDAWQHHRVLHERALSALNENGNEE 123
>10_07_0177 -
13841148-13841267,13841569-13841645,13842710-13842860,
13842942-13843056,13843145-13843236,13843317-13843370,
13843849-13843935,13844023-13844109,13844191-13844274,
13844359-13844445,13844793-13845549,13846491-13846648
Length = 622
Score = 37.1 bits (82), Expect = 0.023
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 11 AQLQCPTCIK--LGIKGSFFCNQDCFKKSWKTHKIIHSLA 48
A +QC C+K + + S+ C+ CF +W+ H+++H A
Sbjct: 73 ATIQCLGCVKSKIPVAKSYHCSAKCFSDAWQHHRVLHERA 112
>12_02_0241 + 16190408-16191103
Length = 231
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 116 DDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEIDRVVHE 156
+ EE+E A LG+ + +E DVG+ TDE++R V +
Sbjct: 171 ESEEVEEQGGAISLGKVIEEEMIEEEDVGLPTDELNRRVED 211
>07_03_1208 -
24896905-24896931,24897330-24897341,24898058-24898333,
24898410-24898466,24898561-24898638,24899112-24899198,
24899815-24899904,24900012-24900218
Length = 277
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 109 SAQIKILDDEEIEGMRVACRLGREVLDEAARVCDV---GVSTDEIDR 152
S+ KIL+ +E E + CR R LD A+ V DV G+ T EI +
Sbjct: 122 SSSSKILNADEKEMVSTVCRKARLALDLASEVMDVAAFGLGTTEISQ 168
>05_03_0633 +
16416913-16417009,16417976-16418060,16418398-16418551,
16418808-16419023,16419105-16419241,16419317-16419408,
16419622-16419804,16421722-16421819,16422021-16422070,
16424605-16424756,16424944-16425069,16426315-16426523
Length = 532
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 223 GNVPETTRKLVQVTHECLQKAIDIVRPGEKYREIGNVIQKHAQANGYSVVRSYCGH 278
G V ++ + + A+ +VRPG+K +++ IQK A A +V H
Sbjct: 83 GAVTGKAADVLAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAYDCKIVEGVLSH 138
>03_06_0239 -
32578231-32578353,32578431-32578655,32579081-32579248,
32579331-32579446,32579540-32579692,32579779-32579922,
32580775-32581576
Length = 576
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 103 EYAAKGSAQIKILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEID-RVVHEACIER 161
E+A K A+ K+L E++E +R ++ + A V VG D + ++V E C
Sbjct: 138 EFACKSIAKRKLLTQEDVEDVRREIQIMHHLAGHANVVSIVGAYEDAVAVQLVMELCAGG 197
Query: 162 ECYPSPLNYYNFPNSCCTSINEVI 185
E + + ++ + VI
Sbjct: 198 ELFDRIIQRGHYSEKAAAQLARVI 221
>02_01_0084 -
573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 29.5 bits (63), Expect = 4.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 83 VPP-HIGRPDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLGREVLDEAARVC 141
+PP H P+ + H G P S S+Q K+ +E+EG C + + RVC
Sbjct: 223 IPPIHYEEPE-SGHGDGEPLSIQKEVASSQFKVTASDEMEGNSNIC-VACGTPGDLNRVC 280
Query: 142 DVG 144
D G
Sbjct: 281 DSG 283
>07_01_0137 +
1005818-1006852,1007645-1007827,1008398-1008616,
1008682-1008690
Length = 481
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 7 CKSIAQLQCPTCIKLGIKGSFFCNQDC---FKKSWKTHKII 44
C S+ +L+ T I L ++ C+ DC +WKT +++
Sbjct: 389 CTSVRRLKLVTHISLDLEAQAVCSSDCVCDLPPNWKTEELL 429
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.138 0.447
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,627,466
Number of Sequences: 37544
Number of extensions: 580625
Number of successful extensions: 1294
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1272
Number of HSP's gapped (non-prelim): 19
length of query: 378
length of database: 14,793,348
effective HSP length: 83
effective length of query: 295
effective length of database: 11,677,196
effective search space: 3444772820
effective search space used: 3444772820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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