GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002391-TA|BGIBMGA002391-PA|undefined
         (94 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    20   5.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    20   5.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          19   6.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    19   6.6  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 12/55 (21%), Positives = 24/55 (43%)

Query: 7   VDGAVICTPVKPVDESTRTVDPAMIGVLVGMALMFVIICVVLRLFSRARWRENRT 61
           +D   +   ++   E T T+       L  +   F  + V++ +FSR +   N+T
Sbjct: 294 IDTMYLFIHIRSRQEDTDTLVVIYTFNLFYLCFCFYWLLVMVAMFSRTQQSANKT 348


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 12/55 (21%), Positives = 24/55 (43%)

Query: 7   VDGAVICTPVKPVDESTRTVDPAMIGVLVGMALMFVIICVVLRLFSRARWRENRT 61
           +D   +   ++   E T T+       L  +   F  + V++ +FSR +   N+T
Sbjct: 250 IDTMYLFIHIRSRQEDTDTLVVIYTFNLFYLCFCFYWLLVMVAMFSRTQQSANKT 304


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.4 bits (38), Expect = 6.6
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 46  VVLRLFSRARWRENRTIFNTPNPRLMNVS 74
           ++L  F   RWR+   ++   NP    V+
Sbjct: 646 LILDKFFFPRWRQTLAMWLNHNPNYAEVT 674


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 19.4 bits (38), Expect = 6.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 24  RTVDPAMIGVLVGMALMFVIICVVLRLFSRARWRENR 60
           R+ DP +   L GM   ++II + L L       EN+
Sbjct: 308 RSNDPKVTLELCGMISTYLIIMIQLDLARTVPKFENK 344


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.138    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,654
Number of Sequences: 317
Number of extensions: 703
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 94
length of database: 114,650
effective HSP length: 48
effective length of query: 46
effective length of database: 99,434
effective search space:  4573964
effective search space used:  4573964
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.2 bits)
S2: 37 (19.0 bits)