Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002391-TA|BGIBMGA002391-PA|undefined
(94 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_984| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.31
SB_16879| Best HMM Match : Stig1 (HMM E-Value=1) 30 0.31
SB_47465| Best HMM Match : EGF_CA (HMM E-Value=2.4e-08) 29 0.54
SB_45587| Best HMM Match : Somatomedin_B (HMM E-Value=1e-06) 29 0.54
SB_18710| Best HMM Match : Glycophorin_A (HMM E-Value=0.42) 28 0.94
SB_6604| Best HMM Match : Extensin_2 (HMM E-Value=0.27) 28 1.2
SB_6059| Best HMM Match : 7tm_2 (HMM E-Value=6.5e-09) 27 2.2
SB_48778| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_23862| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_37980| Best HMM Match : 7tm_2 (HMM E-Value=5.3e-13) 27 2.9
SB_4397| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_43870| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 2.9
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 3.8
SB_6444| Best HMM Match : CRAM_rpt (HMM E-Value=3e-11) 26 3.8
SB_54913| Best HMM Match : Acyltransferase (HMM E-Value=4.2) 25 6.7
SB_51814| Best HMM Match : Rota_NS26 (HMM E-Value=5.6) 25 6.7
SB_49135| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.7
SB_11219| Best HMM Match : PADR1 (HMM E-Value=2) 25 6.7
SB_5202| Best HMM Match : Acyltransferase (HMM E-Value=3.5e-13) 25 6.7
SB_50016| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
SB_56815| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
SB_11096| Best HMM Match : Fz (HMM E-Value=0.00044) 25 8.8
>SB_984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 29.9 bits (64), Expect = 0.31
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 28 PAMIGVLVGMALMFVIICVVLRLFSRARWRENRTIFNTPNPRLMNVS 74
PA++G LVG A++ +I +++ R R ++ P R++ +
Sbjct: 109 PAIVGSLVGFAILVAVISLLVYFCCRRRRATQGSVITPPQQRIITTT 155
>SB_16879| Best HMM Match : Stig1 (HMM E-Value=1)
Length = 232
Score = 29.9 bits (64), Expect = 0.31
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 28 PAMIGVLVGMALMFVIICVVLRLFSRARWRENRTIFNTPNPRLMNVS 74
PA++G LVG A++ +I +++ R R ++ P R++ +
Sbjct: 109 PAIVGSLVGFAILVAVISLLVYFCCRRRRATQGSVITPPQQRIITTT 155
>SB_47465| Best HMM Match : EGF_CA (HMM E-Value=2.4e-08)
Length = 263
Score = 29.1 bits (62), Expect = 0.54
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 14/66 (21%)
Query: 5 VTVDGAVICTPVKPV-----------DESTRTVDPAMIG-VLVGMALMFVIICVVLRLFS 52
+ G+ +CT V+P D S+R + ++G V+V +A++ V++C++ L
Sbjct: 170 INTHGSYLCTCVEPYVSGPGGCVLSSDSSSRVL--VIVGSVVVSVAVLVVVVCLMYYLLW 227
Query: 53 RARWRE 58
R+R+RE
Sbjct: 228 RSRYRE 233
>SB_45587| Best HMM Match : Somatomedin_B (HMM E-Value=1e-06)
Length = 1003
Score = 29.1 bits (62), Expect = 0.54
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 12 ICTPVKPVDESTRTVDPAMIGVLVGMALMFVIICVVLRLFSRARWRENRTIFNTPNPRLM 71
+CT + P E T DPA + L M ++ I +V L + + E RTI P LM
Sbjct: 813 VCTDLPPRREKTWADDPA-LSWLTLMCMLLSIAGLVFFLVTYLLFSELRTI---PGVNLM 868
Query: 72 NVSL 75
N++L
Sbjct: 869 NLAL 872
>SB_18710| Best HMM Match : Glycophorin_A (HMM E-Value=0.42)
Length = 1451
Score = 28.3 bits (60), Expect = 0.94
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 6 TVDGAVICTPVKPVDESTRTVDPAMIGVLVGMALMFVIICVVLRLFSRARWRENRTIFNT 65
T++G V TP + + RT+ G + +A++ +I+C+V WR R +
Sbjct: 166 TLNGHVT-TPRAESERNVRTIAGGATGGVALIAMVTMIVCLV--------WRRRRKPKHV 216
Query: 66 PNPRLMNVSLLRESKLLHSQMPSEAGEYG 94
P P + VS L + Q + E G
Sbjct: 217 PKPVKLRVSTLNGNTNNRVQEHDQVSEEG 245
Score = 28.3 bits (60), Expect = 0.94
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 5/94 (5%)
Query: 1 MVPLVTVDGAVICTPVKPVDESTRTVDPAMIGVLVGMALMFVIICVVLRLFSRARWRENR 60
M +T D + P D+S R V G G+AL+ ++ +V + WR R
Sbjct: 1153 MPAFITSDTTLNGHVTTPRDKSERNVGTIAGGATGGVALIAMVTMIVCLV-----WRRRR 1207
Query: 61 TIFNTPNPRLMNVSLLRESKLLHSQMPSEAGEYG 94
+ P P + VS L + Q + E G
Sbjct: 1208 KPKHVPKPVKLRVSTLNGNTNNRVQEHDQVSEEG 1241
Score = 27.5 bits (58), Expect = 1.6
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 6 TVDGAVICTPVKPVDESTRTVDPAMIGVLVGMALMFVIICVVLRLFSRARWRENRTIFNT 65
T++G VI TP + + T+ G + +A++ +I+C+V WR R +
Sbjct: 683 TLNGHVI-TPRADSERNVGTIAGGATGGVALIAMVTMIVCLV--------WRRRRKPKHV 733
Query: 66 PNPRLMNVSLLRESKLLHSQMPSEAGEYG 94
P P + VS L + Q + E G
Sbjct: 734 PKPVKLRVSTLNGNTNNRVQEHDQVSEEG 762
>SB_6604| Best HMM Match : Extensin_2 (HMM E-Value=0.27)
Length = 492
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 57 RENRTIFNTPNPRLMNVSLLRESKLLHSQMPSEAGEYG 94
R++ T++NTPN R + +++ K+ + PS EYG
Sbjct: 446 RKDETVYNTPNGRGRPSTYIKKDKV--ASNPSATKEYG 481
>SB_6059| Best HMM Match : 7tm_2 (HMM E-Value=6.5e-09)
Length = 1069
Score = 27.1 bits (57), Expect = 2.2
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 12 ICTPVKPVDESTRTVDPAMIGVLVGMALMFVIICVVLRLFSRARWRENRTIFNTPNPRLM 71
+CT + P E T DPA + L + ++ I +V L + + E RTI P LM
Sbjct: 773 VCTYLPPWHEKTWADDPA-LSWLTLVCMLLSIAGLVFFLVTYLLFSELRTI---PGVNLM 828
Query: 72 NVSL 75
N++L
Sbjct: 829 NLAL 832
>SB_48778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1165
Score = 27.1 bits (57), Expect = 2.2
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 12 ICTPVKPVDESTRTVDPAMIGVLVGMALMFVIICVVLRLFSRARWRENRTIFNTPNPRLM 71
+CT + P E T DPA + L M ++ I +V L + + E RTI P LM
Sbjct: 786 VCTDLPPRREKTWADDPA-LSWLTLMCMLLSIAGLVFFLVTYLLFSELRTI---PGVNLM 841
Query: 72 NV 73
N+
Sbjct: 842 NL 843
>SB_23862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3112
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 15 PVKPVDESTRTVDPAMIGVLVGMALMFVIICVVL 48
P+ P + + +IG +VG L+ V+I VV+
Sbjct: 2976 PISPTESGLTETEKIIIGCVVGGLLLIVLIVVVV 3009
>SB_37980| Best HMM Match : 7tm_2 (HMM E-Value=5.3e-13)
Length = 1297
Score = 26.6 bits (56), Expect = 2.9
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 10 AVICTPVKPVDESTR-----TVDPAMIGVLVGMALMFVIICVVLRLFSRARWRENRTIFN 64
A +CT V E + T+D ++ L + ++ I+ +V L + +R+ RT
Sbjct: 719 AYVCTKVTSSREVVKKNRKGTLDDPVLATLTLVCMVLSIVALVFFLVTYFLFRQLRT--- 775
Query: 65 TPNPRLMNVSL 75
TP LMN++L
Sbjct: 776 TPGVNLMNLAL 786
>SB_4397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 26.6 bits (56), Expect = 2.9
Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 9 GAVICTPVKPVDESTRTVDPAMIGV--LVGMALMFVIICVVLR 49
G + +KP + TRT+ P M+G+ + + ++++ I +V+R
Sbjct: 158 GMAVLILIKPANVCTRTILPYMVGLPSTLILVILYMKIFIVIR 200
>SB_43870| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 869
Score = 26.6 bits (56), Expect = 2.9
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 10 AVICTPVKPVDESTRTVDPAMIGVLVGMALMFVIICV 46
A++ T + E T V +++GV+V + L+ I C+
Sbjct: 237 AILATAARSSKEQTFEVTMSVVGVVVFIVLLVFIFCI 273
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 26.2 bits (55), Expect = 3.8
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 4 LVTVDGAVICTPVKPVDESTRTVDPAMIGVLVGMALMFVIICVVLRLFSRAR-WRENRTI 62
+VT+D + TP+K + + R D G + ++C + L +R R +R+ RTI
Sbjct: 2002 IVTMDTVTMETPIKRMRRTRRDTD--------GSTVFRALVCFSISLATRTRKYRQERTI 2053
>SB_6444| Best HMM Match : CRAM_rpt (HMM E-Value=3e-11)
Length = 2297
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 16 VKPVDESTRTVDPAMIGVLVGMALMFVIICVVLRLFSRARWRENR 60
V+P D+ ++GVLV + L+ VI+ V+ + W++N+
Sbjct: 2230 VQPTDKPKSDNTVLLVGVLVPVILVLVIVSAVILVL----WKQNK 2270
>SB_54913| Best HMM Match : Acyltransferase (HMM E-Value=4.2)
Length = 279
Score = 25.4 bits (53), Expect = 6.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 20 DESTRTVDPAMIGVLVGMALMFVIICVVLRLFSRARW 56
D+ TV M+G +V + V+ ++L +S ARW
Sbjct: 197 DKQEATVRKQMVGSIVFFVGVIVVSVLLLYRYSYARW 233
>SB_51814| Best HMM Match : Rota_NS26 (HMM E-Value=5.6)
Length = 282
Score = 25.4 bits (53), Expect = 6.7
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 6 TVDGAVICTPVKPVDESTRTVDPAMIGVLVGMALMFVIICV 46
TV G + P K D+ T V+ IG+ VG+A++ VI+ +
Sbjct: 127 TVGGKDVADP-KAADKLTE-VERLYIGLGVGLAILLVIVII 165
>SB_49135| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 25.4 bits (53), Expect = 6.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 24 RTVDPAMIGVLVGMALMFVIICVV 47
R++ PA+IGV +G AL + I VV
Sbjct: 55 RSLTPAIIGVSLGFALSMLYIPVV 78
>SB_11219| Best HMM Match : PADR1 (HMM E-Value=2)
Length = 543
Score = 25.4 bits (53), Expect = 6.7
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 33 VLVGMALMFVIICVVLRLFSRARWRENRTIFNTPNP 68
VLVG+ L+F C VL L+ R W E F T P
Sbjct: 391 VLVGVHLLFEERCAVLSLY-RQPWSEACACFLTLCP 425
>SB_5202| Best HMM Match : Acyltransferase (HMM E-Value=3.5e-13)
Length = 326
Score = 25.4 bits (53), Expect = 6.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 20 DESTRTVDPAMIGVLVGMALMFVIICVVLRLFSRARW 56
D+ TV M+G +V + V+ ++L +S ARW
Sbjct: 244 DKQEATVRKQMVGSIVFFVGVIVVSVLLLYRYSYARW 280
>SB_50016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2065
Score = 25.0 bits (52), Expect = 8.8
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 19 VDESTRTVDPAMIGVLVGMALMFVIICVVLRLFSR 53
V+ + V+P +IG+ V ++ V + VV L+ R
Sbjct: 2006 VEHAQSLVNPLVIGIAVLCCVLLVALAVVWTLYKR 2040
>SB_56815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 363
Score = 25.0 bits (52), Expect = 8.8
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 30 MIGVLVGMALMFVIICVVLRLFSRARWRENRTIFNTPNPRLMNVSLLRESKLLHSQMPS 88
++G+L G+ ++ V + V L L R+ N+ T RLM++ + LH M S
Sbjct: 41 ILGIL-GLIVLVVAVAVPLLLVLRSD--RNQVTLTTTRTRLMDLPYTTINATLHPSMTS 96
>SB_11096| Best HMM Match : Fz (HMM E-Value=0.00044)
Length = 918
Score = 25.0 bits (52), Expect = 8.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 28 PAMIGVLVGMALMFVIICVVLRLFSRARWRENR 60
PA+ ++V +A++ II +VL + WR++R
Sbjct: 676 PAVQVLVVAVAVIVPIILIVLIILGVLAWRQHR 708
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.325 0.138 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,023,614
Number of Sequences: 59808
Number of extensions: 101603
Number of successful extensions: 316
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 298
Number of HSP's gapped (non-prelim): 25
length of query: 94
length of database: 16,821,457
effective HSP length: 70
effective length of query: 24
effective length of database: 12,634,897
effective search space: 303237528
effective search space used: 303237528
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 52 (25.0 bits)
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