GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002391-TA|BGIBMGA002391-PA|undefined
         (94 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    26   0.27 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   2.5  
AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione tranfe...    23   2.5  
CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...    21   7.6  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 7   VDGAVICTPVKPVDESTRT---VDPAMIGVLVGMALMFVIICVVLRLFSRAR 55
           +  A+ C  + P +E  +T   V   +  VL  + + F  ICV +RL  RAR
Sbjct: 249 LSSAMYCEELWPSEEMRKTFSIVTSILQFVLPFIIMAFCYICVSIRLNDRAR 300


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/26 (30%), Positives = 16/26 (61%)

Query: 6   TVDGAVICTPVKPVDESTRTVDPAMI 31
           T+D A++ TP   ++ ST  +D  ++
Sbjct: 521 TIDAALVNTPAGAINMSTPFIDSEIV 546


>AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione
          tranferase d9 protein.
          Length = 216

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)

Query: 2  VPLVTVDGAVICTP 15
          VP + VDG  IC P
Sbjct: 52 VPTLVVDGVAICEP 65


>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
          receptor protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 1  MVPLVTVDGAVICTPVKPVDESTRTVDP 28
          +V + T D AV+    +P D+   T  P
Sbjct: 38 LVDVETEDAAVVADETEPEDDLETTKSP 65


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.325    0.138    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,166
Number of Sequences: 2123
Number of extensions: 3017
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 4
length of query: 94
length of database: 516,269
effective HSP length: 54
effective length of query: 40
effective length of database: 401,627
effective search space: 16065080
effective search space used: 16065080
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 42 (21.0 bits)