GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002391-TA|BGIBMGA002391-PA|undefined
         (94 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        20   5.9  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    20   5.9  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    20   5.9  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     20   5.9  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 19.8 bits (39), Expect = 5.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 32 GVLVGMALMFVIICVVLRLFSRARWRENRTI 62
          G+++G+ LM   I  +L  F ++    N+T+
Sbjct: 10 GMMIGVLLMLAPINALLLGFVQSTPDNNKTV 40


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 19.8 bits (39), Expect = 5.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 48  LRLFSRARWRENRTIFNTPNPRLMNVSLLRESKL 81
           ++L  R +W + R  FN    RL  ++L   S++
Sbjct: 82  VQLTFREQWLDERLRFNDFGGRLKYLTLTDASRV 115


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 19.8 bits (39), Expect = 5.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 48  LRLFSRARWRENRTIFNTPNPRLMNVSLLRESKL 81
           ++L  R +W + R  FN    RL  ++L   S++
Sbjct: 82  VQLTFREQWLDERLRFNDFGGRLKYLTLTDASRV 115


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 19.8 bits (39), Expect = 5.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query: 51  FSRARWRENRTIFNTPNPRLMN 72
           F R RW  + T+F+  N  L +
Sbjct: 162 FLRTRWSISGTVFDLINIHLFH 183


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.138    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,667
Number of Sequences: 429
Number of extensions: 834
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 94
length of database: 140,377
effective HSP length: 49
effective length of query: 45
effective length of database: 119,356
effective search space:  5371020
effective search space used:  5371020
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.7 bits)
S2: 38 (19.4 bits)