Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002389-TA|BGIBMGA002389-PA|IPR013103|Reverse
transcriptase, RNA-dependent DNA polymerase
(179 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 62 1e-11
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 56 6e-10
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 25 1.8
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 24 2.3
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 24 3.1
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 24 3.1
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 24 3.1
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 24 3.1
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 24 3.1
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 24 3.1
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 24 3.1
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 23 4.1
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 4.1
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 23 5.4
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 23 5.4
AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin bi... 23 7.2
DQ974167-1|ABJ52807.1| 434|Anopheles gambiae serpin 8 protein. 22 9.5
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 22 9.5
AF457553-1|AAL68783.1| 178|Anopheles gambiae mucin-like protein... 22 9.5
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 62.1 bits (144), Expect = 1e-11
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 8 EKETIPSEEGIQKCAVTSEDSTCDSLNSTYMTDDATYVPDDTSTTSSDEFCDSKSNHKSE 67
E+E E I++ ++ S CDS N DD T +++E +S+ ++
Sbjct: 345 EEEDSTDETLIEEELTDTDSSMCDSTNE----DDGD--DGHTLERAAEELTVRRSSRSTK 398
Query: 68 NLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQS 127
+ P + + T + I + E + T+E+ M +++ W +AM+EEI+S
Sbjct: 399 GVPP--QRFRETTGMVRIFLNERILITQEYCEPR--TFEEAMSCPDRDLWKRAMEEEIKS 454
Query: 128 FHQNDAWELVDRPSGENIVACKWVYKKKLNSD 159
H+N WE+ P V KWV+K+K++ D
Sbjct: 455 LHENATWEIASLPKDRKAVGSKWVFKRKMDGD 486
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 56.0 bits (129), Expect = 6e-10
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 104 TYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVDRPSGENIVACKWVYKKKLNSD 159
TY++ + G + EW AM EE+QS +N WELV+ P + KW++ K + D
Sbjct: 706 TYKEAVSGPQSAEWKTAMAEEMQSHQENGTWELVELPPHRKAIGSKWIFNCKADED 761
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 24.6 bits (51), Expect = 1.8
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 96 EEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVD 138
EE DD+ ED + + E S+ M + + N +WE VD
Sbjct: 1731 EEDDDDDDGEEDDVENDDPELSSQLMVDSMNENASNCSWEAVD 1773
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 24.2 bits (50), Expect = 2.3
Identities = 13/57 (22%), Positives = 23/57 (40%)
Query: 86 YGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVDRPSG 142
Y Y +C+ EE + + + V+ SEQ+ S + + E +D G
Sbjct: 237 YRYLQLCKGVEESERTIANLQSVIGESEQKIESNCATAQTLEQEAKELQERIDTEGG 293
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.8 bits (49), Expect = 3.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 2 IQAVVEEKETIPSEEGIQKCA-------VTSEDSTCDSLNSTYMTDDATYVPD 47
I+ V E IP ++ KC V D+T DSLN T+ D V D
Sbjct: 76 IRCAVHEINNIPCQDLDNKCREKIGLYKVQLVDATDDSLNCTFRFSDEKNVCD 128
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.8 bits (49), Expect = 3.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 2 IQAVVEEKETIPSEEGIQKCA-------VTSEDSTCDSLNSTYMTDDATYVPD 47
I+ V E IP ++ KC V D+T DSLN T+ D V D
Sbjct: 76 IRCAVHEINNIPCQDLDNKCREKIGLYKVQLVDATDDSLNCTFRFSDEKNVCD 128
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.8 bits (49), Expect = 3.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 2 IQAVVEEKETIPSEEGIQKCA-------VTSEDSTCDSLNSTYMTDDATYVPD 47
I+ V E IP ++ KC V D+T DSLN T+ D V D
Sbjct: 76 IRCAVHEINNIPCQDLDNKCREKIGLYKVQLVDATDDSLNCTFRFSDEKNVCD 128
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.8 bits (49), Expect = 3.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 2 IQAVVEEKETIPSEEGIQKCA-------VTSEDSTCDSLNSTYMTDDATYVPD 47
I+ V E IP ++ KC V D+T DSLN T+ D V D
Sbjct: 76 IRCAVHEINNIPCQDLDNKCREKIGLYKVQLVDATDDSLNCTFRFSDEKNVCD 128
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.8 bits (49), Expect = 3.1
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 2 IQAVVEEKETIPSEEGIQKCAVTSEDSTCDSLNSTYMTDDATYVPDDTSTTSS 54
++ + EE+ P + ++TS S S N+T ++D Y TSTT+S
Sbjct: 596 LKTLKEEEPMTPLQSTTALSSITSFSS---SGNTTVVSDYDVYGKGSTSTTTS 645
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 23.8 bits (49), Expect = 3.1
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 2 IQAVVEEKETIPSEEGIQKCAVTSEDSTCDSLNSTYMTDDATYVPDDTSTTSS 54
++ + EE+ P + ++TS S S N+T ++D Y TSTT+S
Sbjct: 597 LKTLKEEEPMTPLQSTTALSSITSFSS---SGNTTVVSDYDVYGKGSTSTTTS 646
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 23.8 bits (49), Expect = 3.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 2 IQAVVEEKETIPSEEGIQKCA-------VTSEDSTCDSLNSTYMTDDATYVPD 47
I+ V E IP ++ KC V D+T DSLN T+ D V D
Sbjct: 652 IRCAVHEINNIPCQDLDNKCREKIGLYKVQLVDATDDSLNCTFRFSDEKNVCD 704
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 23.4 bits (48), Expect = 4.1
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 25 SEDSTCDSLNSTYMTDDATYVPDDTSTTSSDEFCDSKSNHKSENLQPIIK-VEKR 78
++DS+ S +S+ +D + D+S++SS+E ++ +E + K VE+R
Sbjct: 362 TDDSSSSSSSSSSDSDSDSSSSSDSSSSSSEEEAENFKISPAEQYKKQAKEVERR 416
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 23.4 bits (48), Expect = 4.1
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 25 SEDSTCDSLNSTYMTDDATYVPDDTSTTSSDEFCDSKSNHKSENLQPIIK-VEKR 78
++DS+ S +S+ +D + D+S++SS+E ++ +E + K VE+R
Sbjct: 362 TDDSSSSSSSSSSDSDSDSSSSSDSSSSSSEEEAENFKISTAEQYKKQAKEVERR 416
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.0 bits (47), Expect = 5.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 154 KKLNSDNSHCIAHNKDTLKVIS 175
+ L++D AH+KDT K++S
Sbjct: 1099 QNLSADYRLVKAHDKDTFKIVS 1120
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.0 bits (47), Expect = 5.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 94 SSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVD 138
S +E DD +D + + E S+ M + + N +WE VD
Sbjct: 1728 SDKEDDDGDDGEDDDVENDDPELSSQLMVDSMNENASNCSWEAVD 1772
>AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin
binding protein protein.
Length = 567
Score = 22.6 bits (46), Expect = 7.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 25 SEDSTCDSLNSTYMTDDATYVPDDTSTTSSDEFCDSKS 62
SE S N+T ++ ++ +STTSS SK+
Sbjct: 526 SESVRSQSNNTTVVSTPSSSTTSSSSTTSSSSSSSSKT 563
>DQ974167-1|ABJ52807.1| 434|Anopheles gambiae serpin 8 protein.
Length = 434
Score = 22.2 bits (45), Expect = 9.5
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 2 IQAVVEEKETIPSEEGIQKCAVTS 25
I +V+++ + + +EEG AVT+
Sbjct: 369 ISSVIQQTKIVVNEEGTMTAAVTT 392
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 22.2 bits (45), Expect = 9.5
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 31 DSLNSTYMTDDATYVPDDTSTTSSDEFCDSKSNHKSENLQPIIKV 75
+S + YM A + D T+T F S +L I+KV
Sbjct: 723 NSSDGYYMPHHAVFKQDSTTTKCRVVFDGSCKTSNGRSLNDILKV 767
>AF457553-1|AAL68783.1| 178|Anopheles gambiae mucin-like protein
protein.
Length = 178
Score = 22.2 bits (45), Expect = 9.5
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 22 AVTSEDSTCDSLNSTYMTD-DATYVPDDTSTTSSDEFCDSKSN 63
A TSE +T + ++T +D D T + +TT+ + S N
Sbjct: 80 ATTSEATTTAAASTTQASDSDNTTTTAEATTTTEAQTTSSSDN 122
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.308 0.124 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,203
Number of Sequences: 2123
Number of extensions: 8435
Number of successful extensions: 27
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 20
length of query: 179
length of database: 516,269
effective HSP length: 60
effective length of query: 119
effective length of database: 388,889
effective search space: 46277791
effective search space used: 46277791
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 45 (22.2 bits)
- SilkBase 1999-2023 -