Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002389-TA|BGIBMGA002389-PA|IPR013103|Reverse
transcriptase, RNA-dependent DNA polymerase
(179 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06633-1|AAA16575.1| 324|Homo sapiens transcription factor prot... 35 0.14
BC036449-1|AAH36449.1| 359|Homo sapiens pleckstrin homology, Se... 35 0.18
AF068836-1|AAC19129.1| 359|Homo sapiens cytohesin binding prote... 35 0.18
AC019201-1|AAY14898.1| 359|Homo sapiens unknown protein. 35 0.18
BC065202-1|AAH65202.2| 263|Homo sapiens receptor (chemosensory)... 33 0.56
BC034744-1|AAH34744.4| 261|Homo sapiens RTP1 protein protein. 33 0.56
BX641037-1|CAE46023.1| 441|Homo sapiens hypothetical protein pr... 32 0.97
BC107570-1|AAI07571.1| 520|Homo sapiens BAZ2B protein protein. 32 0.97
AB040909-1|BAA96000.2| 2142|Homo sapiens KIAA1476 protein protein. 32 0.97
BC046098-1|AAH46098.1| 450|Homo sapiens CBF1 interacting corepr... 32 1.3
BC031018-1|AAH31018.1| 426|Homo sapiens Unknown (protein for IM... 32 1.3
AC018470-1|AAY24216.1| 450|Homo sapiens unknown protein. 32 1.3
AF098297-1|AAD05243.1| 450|Homo sapiens CBF1 interacting corepr... 31 1.7
CR769776-11|CAI95383.1| 823|Homo sapiens ankyrin repeat domain ... 31 2.2
BX664727-6|CAI39536.1| 823|Homo sapiens ankyrin repeat domain 2... 31 2.2
BX649567-2|CAH71137.1| 823|Homo sapiens ankyrin repeat domain 2... 31 2.2
AL773545-6|CAI12706.1| 823|Homo sapiens ankyrin repeat domain 2... 31 2.2
AL513478-3|CAH72532.1| 823|Homo sapiens ankyrin repeat domain 2... 31 2.2
AL357081-2|CAI41323.1| 1362|Homo sapiens spectrin repeat contain... 31 2.2
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 31 2.2
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 31 2.2
AB033088-1|BAA86576.1| 1362|Homo sapiens KIAA1262 protein protein. 31 2.2
AL596094-8|CAI13367.1| 2430|Homo sapiens chromosome 10 open read... 30 3.9
AL365356-3|CAH72616.1| 2430|Homo sapiens chromosome 10 open read... 30 3.9
J04801-1|AAA36485.1| 117|Homo sapiens protein ( Human prothymos... 30 5.2
BC010698-1|AAH10698.1| 387|Homo sapiens WD repeat domain 89 pro... 30 5.2
AY562235-1|AAT70680.1| 227|Homo sapiens receptor transporting p... 30 5.2
AK095324-1|BAC04530.1| 387|Homo sapiens protein ( Homo sapiens ... 30 5.2
AF115513-1|AAO06950.1| 387|Homo sapiens MSTP050 protein. 30 5.2
X60459-2|CAA42992.1| 557|Homo sapiens interferon alpha/beta rec... 29 9.1
X57120-1|CAA40402.1| 820|Homo sapiens Fibroblast Growth Factor ... 29 9.1
M60485-1|AAA35840.1| 820|Homo sapiens fibroblast growth factor ... 29 9.1
M34641-1|AAA35835.1| 820|Homo sapiens protein ( Human fibroblas... 29 9.1
J03171-1|AAA52730.1| 557|Homo sapiens IFNAR protein. 29 9.1
BC045552-1|AAH45552.1| 471|Homo sapiens FGD4 protein protein. 29 9.1
BC021825-1|AAH21825.1| 557|Homo sapiens interferon (alpha, beta... 29 9.1
BC018128-1|AAH18128.1| 820|Homo sapiens fibroblast growth facto... 29 9.1
BC011912-1|AAH11912.1| 351|Homo sapiens dystrobrevin binding pr... 29 9.1
AY654286-1|AAT49100.1| 557|Homo sapiens interferon (alpha, beta... 29 9.1
AY265460-1|AAP91870.1| 351|Homo sapiens Hermansky-Pudlak syndro... 29 9.1
AL022343-2|CAI21977.1| 351|Homo sapiens dystrobrevin binding pr... 29 9.1
AL022343-1|CAI21976.1| 303|Homo sapiens dystrobrevin binding pr... 29 9.1
AL021978-2|CAI42340.1| 351|Homo sapiens dystrobrevin binding pr... 29 9.1
AL021978-1|CAI42339.1| 303|Homo sapiens dystrobrevin binding pr... 29 9.1
AK222812-1|BAD96532.1| 557|Homo sapiens interferon-alpha recept... 29 9.1
AK222770-1|BAD96490.1| 557|Homo sapiens interferon-alpha recept... 29 9.1
AK222718-1|BAD96438.1| 820|Homo sapiens fibroblast growth facto... 29 9.1
AK057294-1|BAB71413.1| 766|Homo sapiens protein ( Homo sapiens ... 29 9.1
AK054593-1|BAB70770.1| 270|Homo sapiens protein ( Homo sapiens ... 29 9.1
AF394226-1|AAL46636.1| 351|Homo sapiens dysbindin protein. 29 9.1
AF152242-1|AAD46774.1| 2156|Homo sapiens retinitis pigmentosa 1 ... 29 9.1
AF146592-1|AAD46769.1| 2156|Homo sapiens retinitis pigmentosa 1 ... 29 9.1
AF143226-1|AAD44197.1| 2156|Homo sapiens retinitis pigmentosa RP... 29 9.1
AF141021-1|AAD42072.1| 2156|Homo sapiens oxygen-regulated protei... 29 9.1
AF061734-1|AAG43145.1| 238|Homo sapiens My031 protein protein. 29 9.1
>L06633-1|AAA16575.1| 324|Homo sapiens transcription factor
protein.
Length = 324
Score = 35.1 bits (77), Expect = 0.14
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 11 TIPSEEGIQKCAVTSEDSTCDSLNSTYMTDDATYVP---DDTSTTSSDEFCDSKSNHKSE 67
T+ SE+G Q C SEDS+ + + TDD ++P DD SS S SN S
Sbjct: 219 TMDSEDGYQTCV--SEDSSRGAFSRQQSTDDECFIPKEGDDFLRRSSSRRNRSISNTSSG 276
Query: 68 NLQPI 72
++ P+
Sbjct: 277 SMSPL 281
>BC036449-1|AAH36449.1| 359|Homo sapiens pleckstrin homology, Sec7
and coiled-coil domains, binding protein protein.
Length = 359
Score = 34.7 bits (76), Expect = 0.18
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 11 TIPSEEGIQKCAVTSEDSTCDSLNSTYMTDDATYVP---DDTSTTSSDEFCDSKSNHKSE 67
T+ SE+G Q C SEDS+ + + TDD ++P DD SS S SN S
Sbjct: 254 TMDSEDGYQTCV--SEDSSRGAFSRQTSTDDECFIPKEGDDFLRRSSSRRNRSISNTSSG 311
Query: 68 NLQPI 72
++ P+
Sbjct: 312 SMSPL 316
>AF068836-1|AAC19129.1| 359|Homo sapiens cytohesin binding protein
HE protein.
Length = 359
Score = 34.7 bits (76), Expect = 0.18
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 11 TIPSEEGIQKCAVTSEDSTCDSLNSTYMTDDATYVP---DDTSTTSSDEFCDSKSNHKSE 67
T+ SE+G Q C SEDS+ + + TDD ++P DD SS S SN S
Sbjct: 254 TMDSEDGYQTCV--SEDSSRGAFSRQTSTDDECFIPKEGDDFLRRSSSRRNRSISNTSSG 311
Query: 68 NLQPI 72
++ P+
Sbjct: 312 SMSPL 316
>AC019201-1|AAY14898.1| 359|Homo sapiens unknown protein.
Length = 359
Score = 34.7 bits (76), Expect = 0.18
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 11 TIPSEEGIQKCAVTSEDSTCDSLNSTYMTDDATYVP---DDTSTTSSDEFCDSKSNHKSE 67
T+ SE+G Q C SEDS+ + + TDD ++P DD SS S SN S
Sbjct: 254 TMDSEDGYQTCV--SEDSSRGAFSRQTSTDDECFIPKEGDDFLRRSSSRRNRSISNTSSG 311
Query: 68 NLQPI 72
++ P+
Sbjct: 312 SMSPL 316
>BC065202-1|AAH65202.2| 263|Homo sapiens receptor (chemosensory)
transporter protein 1 protein.
Length = 263
Score = 33.1 bits (72), Expect = 0.56
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 101 NLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVDRPS-GENIVACKWVYKKKLN-S 158
+L T E + + +EW K E+++ D+W+L+ P+ N+++ W +L+ S
Sbjct: 30 SLTTDETMCKSVTTDEWKKVFYEKMEEAKPADSWDLIIDPNLKHNVLSPGWKQYLELHAS 89
Query: 159 DNSHC 163
HC
Sbjct: 90 GRFHC 94
>BC034744-1|AAH34744.4| 261|Homo sapiens RTP1 protein protein.
Length = 261
Score = 33.1 bits (72), Expect = 0.56
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 101 NLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVDRPS-GENIVACKWVYKKKLN-S 158
+L T E + + +EW K E+++ D+W+L+ P+ N+++ W +L+ S
Sbjct: 28 SLTTDETMCKSVTTDEWKKVFYEKMEEAKPADSWDLIIDPNLKHNVLSPGWKQYLELHAS 87
Query: 159 DNSHC 163
HC
Sbjct: 88 GRFHC 92
>BX641037-1|CAE46023.1| 441|Homo sapiens hypothetical protein
protein.
Length = 441
Score = 32.3 bits (70), Expect = 0.97
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 15 EEGIQKCAVTSEDSTCDSLNSTYMTDDATYVPDDTSTTSSDEFCDSKSNHKSENLQPI-I 73
E+G+ S S+ +N++ ++ A+ T +TSS + K N + QP+
Sbjct: 164 EKGVNGSINGSNTSSVIGINTSVLSTTASSSMGQTKSTSSGGG-NRKCNQEQSKNQPLDA 222
Query: 74 KVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQND 132
+V+K KKP + S + + T + + S+ ++ + +EE QS +++
Sbjct: 223 RVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEEEDQSIEESE 281
>BC107570-1|AAI07571.1| 520|Homo sapiens BAZ2B protein protein.
Length = 520
Score = 32.3 bits (70), Expect = 0.97
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 15 EEGIQKCAVTSEDSTCDSLNSTYMTDDATYVPDDTSTTSSDEFCDSKSNHKSENLQPI-I 73
E+G+ S S+ +N++ ++ A+ T +TSS + K N + QP+
Sbjct: 103 EKGVNGSINGSNTSSVIGINTSVLSTTASSSMGQTKSTSSGGG-NRKCNQEQSKNQPLDA 161
Query: 74 KVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQND 132
+V+K KKP + S + + T + + S+ ++ + +EE QS +++
Sbjct: 162 RVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEEEDQSIEESE 220
>AB040909-1|BAA96000.2| 2142|Homo sapiens KIAA1476 protein protein.
Length = 2142
Score = 32.3 bits (70), Expect = 0.97
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 15 EEGIQKCAVTSEDSTCDSLNSTYMTDDATYVPDDTSTTSSDEFCDSKSNHKSENLQPI-I 73
E+G+ S S+ +N++ ++ A+ T +TSS + K N + QP+
Sbjct: 174 EKGVNGSINGSNTSSVIGINTSVLSTTASSSMGQTKSTSSGGG-NRKCNQEQSKNQPLDA 232
Query: 74 KVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQND 132
+V+K KKP + S + + T + + S+ ++ + +EE QS +++
Sbjct: 233 RVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEEEDQSIEESE 291
>BC046098-1|AAH46098.1| 450|Homo sapiens CBF1 interacting
corepressor protein.
Length = 450
Score = 31.9 bits (69), Expect = 1.3
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 49 TSTTSSDEFCDSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDV 108
+S++SS E +S S +S N + K++++ RKK G+NN ++ +E++
Sbjct: 265 SSSSSSTETSESSSESESNNKEK--KIQRKKRKKNKCSGHNNSDSEEKDKSKKRKLHEEL 322
Query: 109 MRGSEQEEWSKAMKEEI--QSFHQNDAWELVD 138
E +K + +S ++ W D
Sbjct: 323 SSSHHNREKAKEKPRFLKHESSREDSKWSHSD 354
>BC031018-1|AAH31018.1| 426|Homo sapiens Unknown (protein for
IMAGE:4688373) protein.
Length = 426
Score = 31.9 bits (69), Expect = 1.3
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 49 TSTTSSDEFCDSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDV 108
+S++SS E +S S +S N + K++++ RKK G+NN ++ +E++
Sbjct: 265 SSSSSSTETSESSSESESNNKEK--KIQRKKRKKNKCSGHNNSDSEEKDKSKKRKLHEEL 322
Query: 109 MRGSEQEEWSKAMKEEI--QSFHQNDAWELVD 138
E +K + +S ++ W D
Sbjct: 323 SSSHHNREKAKEKPRFLKHESSREDSKWSHSD 354
>AC018470-1|AAY24216.1| 450|Homo sapiens unknown protein.
Length = 450
Score = 31.9 bits (69), Expect = 1.3
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 49 TSTTSSDEFCDSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDV 108
+S++SS E +S S +S N + K++++ RKK G+NN ++ +E++
Sbjct: 265 SSSSSSTETSESSSESESNNKEK--KIQRKKRKKNKCSGHNNSDSEEKDKSKKRKLHEEL 322
Query: 109 MRGSEQEEWSKAMKEEI--QSFHQNDAWELVD 138
E +K + +S ++ W D
Sbjct: 323 SSSHHNREKAKEKPRFLKHESSREDSKWSHSD 354
>AF098297-1|AAD05243.1| 450|Homo sapiens CBF1 interacting
corepressor CIR protein.
Length = 450
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 49 TSTTSSDEFCDSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVD 99
+S++SS E +S S +S N + K++++ RKK G+NN SEE D
Sbjct: 265 SSSSSSTETSESSSESESNNKEK--KIQRKKRKKNKCSGHNN--SDSEEKD 311
>CR769776-11|CAI95383.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A4 protein.
Length = 823
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 59 DSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWS 118
+ + + +SE QP +K T K NIC S+ LT + + + +++
Sbjct: 371 EQQRHERSEKKQPQVKEGNNTNKSEKIQLSENICDSTSSAAAGRLTQQRKIGKTYPQQFP 430
Query: 119 KAMKEE 124
K +KEE
Sbjct: 431 KKLKEE 436
>BX664727-6|CAI39536.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A2 protein.
Length = 823
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 59 DSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWS 118
+ + + +SE QP +K T K NIC S+ LT + + + +++
Sbjct: 371 EQERHERSEKKQPQVKEGNNTNKSEKIQLSENICDSTSSAAAGRLTQQRKIGKTYPQQFP 430
Query: 119 KAMKEE 124
K +KEE
Sbjct: 431 KKLKEE 436
>BX649567-2|CAH71137.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A3 protein.
Length = 823
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 59 DSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWS 118
+ + + +SE QP +K T K NIC S+ LT + + + +++
Sbjct: 371 EQERHERSEKKQPQVKEGNNTNKSEKIQLSENICDSTSSAAAGRLTQQRKIGKTYPQQFP 430
Query: 119 KAMKEE 124
K +KEE
Sbjct: 431 KKLKEE 436
>AL773545-6|CAI12706.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A2 protein.
Length = 823
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 59 DSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWS 118
+ + + +SE QP +K T K NIC S+ LT + + + +++
Sbjct: 371 EQERHERSEKKQPQVKEGNNTNKSEKIQLSENICDSTSSAAAGRLTQQRKIGKTYPQQFP 430
Query: 119 KAMKEE 124
K +KEE
Sbjct: 431 KKLKEE 436
>AL513478-3|CAH72532.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A1 protein.
Length = 823
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 59 DSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWS 118
+ + + +SE QP +K T K NIC S+ LT + + + +++
Sbjct: 371 EQERHERSEKKQPQVKEGNNTNKSEKIQLSENICDSTSSAAAGRLTQQRKIGKTYPQQFP 430
Query: 119 KAMKEE 124
K +KEE
Sbjct: 431 KKLKEE 436
>AL357081-2|CAI41323.1| 1362|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 1362
Score = 31.1 bits (67), Expect = 2.2
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 84 DWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVDRPS 141
+W G+NN + + E+ D L +D + GS E+ SKA + +H EL + S
Sbjct: 994 EWTGFNNKVKKATEMIDQL---QDKLPGSSAEKASKAELLTLLEYHDTFVLELEQQQS 1048
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 31.1 bits (67), Expect = 2.2
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 84 DWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVDRPS 141
+W G+NN + + E+ D L +D + GS E+ SKA + +H EL + S
Sbjct: 5141 EWTGFNNKVKKATEMIDQL---QDKLPGSSAEKASKAELLTLLEYHDTFVLELEQQQS 5195
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 31.1 bits (67), Expect = 2.2
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 84 DWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVDRPS 141
+W G+NN + + E+ D L +D + GS E+ SKA + +H EL + S
Sbjct: 5212 EWTGFNNKVKKATEMIDQL---QDKLPGSSAEKASKAELLTLLEYHDTFVLELEQQQS 5266
>AB033088-1|BAA86576.1| 1362|Homo sapiens KIAA1262 protein protein.
Length = 1362
Score = 31.1 bits (67), Expect = 2.2
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 84 DWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVDRPS 141
+W G+NN + + E+ D L +D + GS E+ SKA + +H EL + S
Sbjct: 994 EWTGFNNKVKKATEMIDQL---QDKLPGSSAEKASKAELLTLLEYHDTFVLELEQQQS 1048
>AL596094-8|CAI13367.1| 2430|Homo sapiens chromosome 10 open reading
frame 18 protein.
Length = 2430
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 46 PDDTSTTSSDEFCDSKSNHKSENLQPI--IKVEKRTRKKPDWYGYNNICQSSEEVDDNLL 103
P++T+ +D +S N+ S+ L + + + T P N C S +D LL
Sbjct: 511 PENTTAAHNDLPENSIVNYDSQALNMLADLALSSATSSTPVSEARNLHCSSELPQNDVLL 570
Query: 104 TYEDVMRGSEQEEWSKAMKEE 124
+ E+ +RG+ E+ + +K +
Sbjct: 571 SKENSLRGTSDHEYHRGVKTQ 591
>AL365356-3|CAH72616.1| 2430|Homo sapiens chromosome 10 open reading
frame 18 protein.
Length = 2430
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 46 PDDTSTTSSDEFCDSKSNHKSENLQPI--IKVEKRTRKKPDWYGYNNICQSSEEVDDNLL 103
P++T+ +D +S N+ S+ L + + + T P N C S +D LL
Sbjct: 511 PENTTAAHNDLPENSIVNYDSQALNMLADLALSSATSSTPVSEARNLHCSSELPQNDVLL 570
Query: 104 TYEDVMRGSEQEEWSKAMKEE 124
+ E+ +RG+ E+ + +K +
Sbjct: 571 SKENSLRGTSDHEYHRGVKTQ 591
>J04801-1|AAA36485.1| 117|Homo sapiens protein ( Human
prothymosin-alpha pseudogene, complete sequence. ).
Length = 117
Score = 29.9 bits (64), Expect = 5.2
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 54 SDEFCDSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDVMRGSE 113
SD D+ S +E+L+ +V + D + N + + E DDN + E+ G E
Sbjct: 2 SDAAVDTSSEITTEDLKEKKEVVEEAENGRDAPAHGNANEENGEPDDNEVDEEEEEGGEE 61
Query: 114 QEEWSKAMKEE 124
+EE +EE
Sbjct: 62 EEEEEGDGEEE 72
>BC010698-1|AAH10698.1| 387|Homo sapiens WD repeat domain 89
protein.
Length = 387
Score = 29.9 bits (64), Expect = 5.2
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 91 ICQSSEEVDDN-LLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVDRPSGENIV 146
IC +E+VDD+ LL + D S+ +K H +D ++ PS N+V
Sbjct: 130 ICAGTEKVDDDALLVFWDARMNSQNLSTTKDSLGAYSETHSDDVTQVRFHPSNPNMV 186
>AY562235-1|AAT70680.1| 227|Homo sapiens receptor transporting
protein 1 protein.
Length = 227
Score = 29.9 bits (64), Expect = 5.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 115 EEWSKAMKEEIQSFHQNDAWELVDRPS-GENIVACKWVYKKKLN-SDNSHC 163
+EW K E+++ D+W+L+ P+ N+++ W +L+ S HC
Sbjct: 8 DEWKKVFYEKMEEAKPADSWDLIIDPNLKHNVLSPGWKQYLELHASGRFHC 58
>AK095324-1|BAC04530.1| 387|Homo sapiens protein ( Homo sapiens
cDNA FLJ38005 fis, clone CTONG2012401. ).
Length = 387
Score = 29.9 bits (64), Expect = 5.2
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 91 ICQSSEEVDDN-LLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVDRPSGENIV 146
IC +E+VDD+ LL + D S+ +K H +D ++ PS N+V
Sbjct: 130 ICAGTEKVDDDALLVFWDARMNSQNLSTTKDSLGAYSETHSDDVTQVRFHPSNPNMV 186
>AF115513-1|AAO06950.1| 387|Homo sapiens MSTP050 protein.
Length = 387
Score = 29.9 bits (64), Expect = 5.2
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 91 ICQSSEEVDDN-LLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVDRPSGENIV 146
IC +E+VDD+ LL + D S+ +K H +D ++ PS N+V
Sbjct: 130 ICAGTEKVDDDALLVFWDARMNSQNLSTTKDSLGAYSETHSDDVTQVRFHPSNPNMV 186
>X60459-2|CAA42992.1| 557|Homo sapiens interferon alpha/beta
receptor protein.
Length = 557
Score = 29.1 bits (62), Expect = 9.1
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 14 SEEGIQKCAVTSEDSTCDSLNSTYMTD-DATYVPDDTSTTSSDEFCDSKSNHK-SENLQ 70
SEE I+KC + ST ++ T TD D TS S + + +S K SE LQ
Sbjct: 495 SEEQIEKCFIIENISTIATVEETNQTDEDHKKYSSQTSQDSGNYSNEDESESKTSEELQ 553
>X57120-1|CAA40402.1| 820|Homo sapiens Fibroblast Growth Factor
Receptor, 3 Ig-Domain Form protein.
Length = 820
Score = 29.1 bits (62), Expect = 9.1
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 6 VEEKETIPSEEGIQKCAVTS---EDSTCDSLN-STYMTDDATYVPDDTSTTSSDEFCDSK 61
VE ++++P++ G+ C +S D+T S+N S + DD S++ E ++K
Sbjct: 86 VEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDALPSSEDDDDDDDSSSEEKETDNTK 145
Query: 62 SNHKSENLQPIIKVEKRTRKKP 83
N + K+EK+ P
Sbjct: 146 PNPVAPYWTSPEKMEKKLHAVP 167
>M60485-1|AAA35840.1| 820|Homo sapiens fibroblast growth factor
receptor protein.
Length = 820
Score = 29.1 bits (62), Expect = 9.1
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 6 VEEKETIPSEEGIQKCAVTS---EDSTCDSLN-STYMTDDATYVPDDTSTTSSDEFCDSK 61
VE ++++P++ G+ C +S D+T S+N S + DD S++ E ++K
Sbjct: 86 VEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDALPSSEDDDDDDDSSSEEKETDNTK 145
Query: 62 SNHKSENLQPIIKVEKRTRKKP 83
N + K+EK+ P
Sbjct: 146 PNPVAPYWTSPEKMEKKLHAVP 167
>M34641-1|AAA35835.1| 820|Homo sapiens protein ( Human fibroblast
growth factor (FGF) receptor-1 mRNA, complete cds. ).
Length = 820
Score = 29.1 bits (62), Expect = 9.1
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 6 VEEKETIPSEEGIQKCAVTS---EDSTCDSLN-STYMTDDATYVPDDTSTTSSDEFCDSK 61
VE ++++P++ G+ C +S D+T S+N S + DD S++ E ++K
Sbjct: 86 VEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDALPSSEDDDDDDDSSSEEKETDNTK 145
Query: 62 SNHKSENLQPIIKVEKRTRKKP 83
N + K+EK+ P
Sbjct: 146 PNPVAPYWTSPEKMEKKLHAVP 167
>J03171-1|AAA52730.1| 557|Homo sapiens IFNAR protein.
Length = 557
Score = 29.1 bits (62), Expect = 9.1
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 14 SEEGIQKCAVTSEDSTCDSLNSTYMTD-DATYVPDDTSTTSSDEFCDSKSNHK-SENLQ 70
SEE I+KC + ST ++ T TD D TS S + + +S K SE LQ
Sbjct: 495 SEEQIEKCFIIENISTIATVEETNQTDEDHKKYSSQTSQDSGNYSNEDESESKTSEELQ 553
>BC045552-1|AAH45552.1| 471|Homo sapiens FGD4 protein protein.
Length = 471
Score = 29.1 bits (62), Expect = 9.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 113 EQEEWSKAMKEEIQSFHQ 130
++EEW KA++E I +FHQ
Sbjct: 260 DKEEWIKALQETIDAFHQ 277
>BC021825-1|AAH21825.1| 557|Homo sapiens interferon (alpha, beta
and omega) receptor 1 protein.
Length = 557
Score = 29.1 bits (62), Expect = 9.1
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 14 SEEGIQKCAVTSEDSTCDSLNSTYMTD-DATYVPDDTSTTSSDEFCDSKSNHK-SENLQ 70
SEE I+KC + ST ++ T TD D TS S + + +S K SE LQ
Sbjct: 495 SEEQIEKCFIIENISTIATVEETNQTDEDHKKYSSQTSQDSGNYSNEDESESKTSEELQ 553
>BC018128-1|AAH18128.1| 820|Homo sapiens fibroblast growth factor
receptor 1 (fms-related tyrosine kinase 2, Pfeiffer sy
protein.
Length = 820
Score = 29.1 bits (62), Expect = 9.1
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 6 VEEKETIPSEEGIQKCAVTS---EDSTCDSLN-STYMTDDATYVPDDTSTTSSDEFCDSK 61
VE ++++P++ G+ C +S D+T S+N S + DD S++ E ++K
Sbjct: 86 VEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDALPSSEDDDDDDDSSSEEKETDNTK 145
Query: 62 SNHKSENLQPIIKVEKRTRKKP 83
N + K+EK+ P
Sbjct: 146 PNPVAPYWTSPEKMEKKLHAVP 167
>BC011912-1|AAH11912.1| 351|Homo sapiens dystrobrevin binding
protein 1 protein.
Length = 351
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 94 SSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWEL 136
S EEV++NLL ED+ E E ++++++ +N EL
Sbjct: 124 SFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKEL 166
>AY654286-1|AAT49100.1| 557|Homo sapiens interferon (alpha, beta
and omega) receptor 1 protein.
Length = 557
Score = 29.1 bits (62), Expect = 9.1
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 14 SEEGIQKCAVTSEDSTCDSLNSTYMTD-DATYVPDDTSTTSSDEFCDSKSNHK-SENLQ 70
SEE I+KC + ST ++ T TD D TS S + + +S K SE LQ
Sbjct: 495 SEEQIEKCFIIENISTIATVEETNQTDEDHKKYSSQTSQDSGNYSNEDESESKTSEELQ 553
>AY265460-1|AAP91870.1| 351|Homo sapiens Hermansky-Pudlak syndrome
type 7 protein protein.
Length = 351
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 94 SSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWEL 136
S EEV++NLL ED+ E E ++++++ +N EL
Sbjct: 124 SFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKEL 166
>AL022343-2|CAI21977.1| 351|Homo sapiens dystrobrevin binding
protein 1 protein.
Length = 351
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 94 SSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWEL 136
S EEV++NLL ED+ E E ++++++ +N EL
Sbjct: 124 SFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKEL 166
>AL022343-1|CAI21976.1| 303|Homo sapiens dystrobrevin binding
protein 1 protein.
Length = 303
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 94 SSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWEL 136
S EEV++NLL ED+ E E ++++++ +N EL
Sbjct: 124 SFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKEL 166
>AL021978-2|CAI42340.1| 351|Homo sapiens dystrobrevin binding
protein 1 protein.
Length = 351
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 94 SSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWEL 136
S EEV++NLL ED+ E E ++++++ +N EL
Sbjct: 124 SFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKEL 166
>AL021978-1|CAI42339.1| 303|Homo sapiens dystrobrevin binding
protein 1 protein.
Length = 303
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 94 SSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWEL 136
S EEV++NLL ED+ E E ++++++ +N EL
Sbjct: 124 SFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKEL 166
>AK222812-1|BAD96532.1| 557|Homo sapiens interferon-alpha receptor
1 precursor variant protein.
Length = 557
Score = 29.1 bits (62), Expect = 9.1
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 14 SEEGIQKCAVTSEDSTCDSLNSTYMTD-DATYVPDDTSTTSSDEFCDSKSNHK-SENLQ 70
SEE I+KC + ST ++ T TD D TS S + + +S K SE LQ
Sbjct: 495 SEEQIEKCFIIENISTIATVEETNQTDEDHKKYSSQTSQDSGNYSNEDESESKTSEELQ 553
>AK222770-1|BAD96490.1| 557|Homo sapiens interferon-alpha receptor
1 precursor variant protein.
Length = 557
Score = 29.1 bits (62), Expect = 9.1
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 14 SEEGIQKCAVTSEDSTCDSLNSTYMTD-DATYVPDDTSTTSSDEFCDSKSNHK-SENLQ 70
SEE I+KC + ST ++ T TD D TS S + + +S K SE LQ
Sbjct: 495 SEEQIEKCFIIENISTIATVEETNQTDEDHKKYSSQTSQDSGNYSNEDESESKTSEELQ 553
>AK222718-1|BAD96438.1| 820|Homo sapiens fibroblast growth factor
receptor 1 isoform 2 precursor variant protein.
Length = 820
Score = 29.1 bits (62), Expect = 9.1
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 6 VEEKETIPSEEGIQKCAVTS---EDSTCDSLN-STYMTDDATYVPDDTSTTSSDEFCDSK 61
VE ++++P++ G+ C +S D+T S+N S + DD S++ E ++K
Sbjct: 86 VEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDALPSSEDDDDDDDSSSEEKETDNTK 145
Query: 62 SNHKSENLQPIIKVEKRTRKKP 83
N + K+EK+ P
Sbjct: 146 PNPVAPYWTSPEKMEKKLHAVP 167
>AK057294-1|BAB71413.1| 766|Homo sapiens protein ( Homo sapiens
cDNA FLJ32732 fis, clone TESTI2001141, highly similar to
Rattus norvegicus actin-filament binding protein Frabin
mRNA. ).
Length = 766
Score = 29.1 bits (62), Expect = 9.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 113 EQEEWSKAMKEEIQSFHQ 130
++EEW KA++E I +FHQ
Sbjct: 508 DKEEWIKALQETIDAFHQ 525
>AK054593-1|BAB70770.1| 270|Homo sapiens protein ( Homo sapiens
cDNA FLJ30031 fis, clone 3NB692001349. ).
Length = 270
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 94 SSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWEL 136
S EEV++NLL ED+ E E ++++++ +N EL
Sbjct: 43 SFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKEL 85
>AF394226-1|AAL46636.1| 351|Homo sapiens dysbindin protein.
Length = 351
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 94 SSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWEL 136
S EEV++NLL ED+ E E ++++++ +N EL
Sbjct: 124 SFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKEL 166
>AF152242-1|AAD46774.1| 2156|Homo sapiens retinitis pigmentosa 1
protein protein.
Length = 2156
Score = 29.1 bits (62), Expect = 9.1
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 49 TSTTSSDEFCDSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDV 108
T T SD+ C K NH E PI + Y N+C + + ++ TY D
Sbjct: 1306 TDTVFSDKACAQKENHTYEGACPI----------DETYVPVNVCNTIDFLNSKENTYTDN 1355
Query: 109 MRGSEQEEWSKAMKEEIQSF----HQNDAWELVDRPSGENIVAC-KWVYKKKLNSDNSH 162
+ +E+ E +++++ ++N LV + N+ +C + +K+ D H
Sbjct: 1356 LDSTEELERGDDIQKDLNILTDPEYKNGFNTLVSHQNVSNLSSCGLCLSEKEAELDKKH 1414
>AF146592-1|AAD46769.1| 2156|Homo sapiens retinitis pigmentosa 1
protein protein.
Length = 2156
Score = 29.1 bits (62), Expect = 9.1
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 49 TSTTSSDEFCDSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDV 108
T T SD+ C K NH E PI + Y N+C + + ++ TY D
Sbjct: 1306 TDTVFSDKACAQKENHTYEGACPI----------DETYVPVNVCNTIDFLNSKENTYTDN 1355
Query: 109 MRGSEQEEWSKAMKEEIQSF----HQNDAWELVDRPSGENIVAC-KWVYKKKLNSDNSH 162
+ +E+ E +++++ ++N LV + N+ +C + +K+ D H
Sbjct: 1356 LDSTEELERGDDIQKDLNILTDPEYKNGFNTLVSHQNVSNLSSCGLCLSEKEAELDKKH 1414
>AF143226-1|AAD44197.1| 2156|Homo sapiens retinitis pigmentosa RP1
protein protein.
Length = 2156
Score = 29.1 bits (62), Expect = 9.1
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 49 TSTTSSDEFCDSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDV 108
T T SD+ C K NH E PI + Y N+C + + ++ TY D
Sbjct: 1306 TDTVFSDKACAQKENHTYEGACPI----------DETYVPVNVCNTIDFLNSKENTYTDN 1355
Query: 109 MRGSEQEEWSKAMKEEIQSF----HQNDAWELVDRPSGENIVAC-KWVYKKKLNSDNSH 162
+ +E+ E +++++ ++N LV + N+ +C + +K+ D H
Sbjct: 1356 LDSTEELERGDDIQKDLNILTDPEYKNGFNTLVSHQNVSNLSSCGLCLSEKEAELDKKH 1414
>AF141021-1|AAD42072.1| 2156|Homo sapiens oxygen-regulated protein 1
protein.
Length = 2156
Score = 29.1 bits (62), Expect = 9.1
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 49 TSTTSSDEFCDSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDV 108
T T SD+ C K NH E PI + Y N+C + + ++ TY D
Sbjct: 1306 TDTVFSDKACAQKENHTYEGACPI----------DETYVPVNVCNTIDFLNSKENTYTDN 1355
Query: 109 MRGSEQEEWSKAMKEEIQSF----HQNDAWELVDRPSGENIVAC-KWVYKKKLNSDNSH 162
+ +E+ E +++++ ++N LV + N+ +C + +K+ D H
Sbjct: 1356 LDSTEELERGDDIQKDLNILTDPEYKNGFNTLVSHQNVSNLSSCGLCLSEKEAELDKKH 1414
>AF061734-1|AAG43145.1| 238|Homo sapiens My031 protein protein.
Length = 238
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 94 SSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWEL 136
S EEV++NLL ED+ E E ++++++ +N EL
Sbjct: 11 SFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKEL 53
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.308 0.124 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,763,425
Number of Sequences: 224733
Number of extensions: 1160159
Number of successful extensions: 3250
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 3219
Number of HSP's gapped (non-prelim): 62
length of query: 179
length of database: 73,234,838
effective HSP length: 85
effective length of query: 94
effective length of database: 54,132,533
effective search space: 5088458102
effective search space used: 5088458102
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 62 (29.1 bits)
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