Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002387-TA|BGIBMGA002387-PA|undefined
(93 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003538-1|AAO39542.1| 995|Drosophila melanogaster RE07016p pro... 74 2e-14
AE014134-2415|AAF53343.2| 995|Drosophila melanogaster CG31811-P... 74 2e-14
BT001352-1|AAN71107.1| 281|Drosophila melanogaster AT26615p pro... 27 3.2
AY113368-1|AAM29373.1| 789|Drosophila melanogaster LD32039p pro... 27 3.2
AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protei... 27 3.2
AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein. 27 3.2
AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB... 27 3.2
AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA... 27 3.2
AE014134-2502|AAF53400.1| 281|Drosophila melanogaster CG4218-PA... 27 3.2
AY075425-1|AAL68241.1| 1234|Drosophila melanogaster LD46584p pro... 27 4.2
AY051896-1|AAK93320.1| 1420|Drosophila melanogaster LD38533p pro... 27 4.2
AJ011114-1|CAA09492.1| 1234|Drosophila melanogaster coatomer alp... 27 4.2
AF241366-1|AAF98388.1| 813|Drosophila melanogaster cleavage and... 27 4.2
AE014296-317|AAF47535.1| 1234|Drosophila melanogaster CG7961-PB,... 27 4.2
AE014296-316|AAF47534.1| 1234|Drosophila melanogaster CG7961-PA,... 27 4.2
AE013599-1901|AAF58240.1| 1455|Drosophila melanogaster CG10110-P... 27 4.2
AE013599-1900|AAM68553.1| 1420|Drosophila melanogaster CG10110-P... 27 4.2
>BT003538-1|AAO39542.1| 995|Drosophila melanogaster RE07016p
protein.
Length = 995
Score = 74.1 bits (174), Expect = 2e-14
Identities = 35/53 (66%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
Query: 15 QACLNTSLSIRQEIQRFESVHPSIYALYDLVELVP--DPLLAQQIRDHVVAIE 65
Q ++ SL+IRQEIQRFESVHPSIYA+Y+L++L+P D +AQ IRDHVV IE
Sbjct: 73 QPLISNSLAIRQEIQRFESVHPSIYAIYELIDLLPMADAQIAQSIRDHVVCIE 125
>AE014134-2415|AAF53343.2| 995|Drosophila melanogaster CG31811-PB,
isoform B protein.
Length = 995
Score = 74.1 bits (174), Expect = 2e-14
Identities = 35/53 (66%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
Query: 15 QACLNTSLSIRQEIQRFESVHPSIYALYDLVELVP--DPLLAQQIRDHVVAIE 65
Q ++ SL+IRQEIQRFESVHPSIYA+Y+L++L+P D +AQ IRDHVV IE
Sbjct: 73 QPLISNSLAIRQEIQRFESVHPSIYAIYELIDLLPMADAQIAQSIRDHVVCIE 125
>BT001352-1|AAN71107.1| 281|Drosophila melanogaster AT26615p
protein.
Length = 281
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 20 TSLSIRQEIQRFESVHPSIYALYDLVELVPDPLLAQQIR 58
+SL+I++ IQRFE + + DL E VP+ L+ +R
Sbjct: 82 SSLNIKKLIQRFEDLRKNSQEFGDLPE-VPEELINVDVR 119
>AY113368-1|AAM29373.1| 789|Drosophila melanogaster LD32039p
protein.
Length = 789
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 10 SRQHSQACLNTSLSIRQEIQRFESVHPSIYALYDLVELVPDPLLAQQIRDHVVAIE 65
SRQH + IR+++Q FE ++ Y++ +L+ L P + ++ V A+E
Sbjct: 290 SRQHVLTRIGVMSLIRKKVQEFEHIN-GYYSMPELI-LKPCEPVRSALKQDVAALE 343
>AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protein
protein.
Length = 1982
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 10 SRQHSQACLNTSLSIRQEIQRFESVHPSIYALYDLVELVPDPLLAQQIRDHVVAIE 65
SRQH + IR+++Q FE ++ Y++ +L+ L P + ++ V A+E
Sbjct: 1483 SRQHVLTRIGVMSLIRKKVQEFEHIN-GYYSMPELI-LKPCEPVRSALKQDVAALE 1536
>AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein.
Length = 1518
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 10 SRQHSQACLNTSLSIRQEIQRFESVHPSIYALYDLVELVPDPLLAQQIRDHVVAIE 65
SRQH + IR+++Q FE ++ Y++ +L+ L P + ++ V A+E
Sbjct: 1019 SRQHVLTRIGVMSLIRKKVQEFEHIN-GYYSMPELI-LKPCEPVRSALKQDVAALE 1072
>AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB,
isoform B protein.
Length = 1983
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 10 SRQHSQACLNTSLSIRQEIQRFESVHPSIYALYDLVELVPDPLLAQQIRDHVVAIE 65
SRQH + IR+++Q FE ++ Y++ +L+ L P + ++ V A+E
Sbjct: 1484 SRQHVLTRIGVMSLIRKKVQEFEHIN-GYYSMPELI-LKPCEPVRSALKQDVAALE 1537
>AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA,
isoform A protein.
Length = 1982
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 10 SRQHSQACLNTSLSIRQEIQRFESVHPSIYALYDLVELVPDPLLAQQIRDHVVAIE 65
SRQH + IR+++Q FE ++ Y++ +L+ L P + ++ V A+E
Sbjct: 1483 SRQHVLTRIGVMSLIRKKVQEFEHIN-GYYSMPELI-LKPCEPVRSALKQDVAALE 1536
>AE014134-2502|AAF53400.1| 281|Drosophila melanogaster CG4218-PA
protein.
Length = 281
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 20 TSLSIRQEIQRFESVHPSIYALYDLVELVPDPLLAQQIR 58
+SL+I++ IQRFE + + DL E VP+ L+ +R
Sbjct: 82 SSLNIKKLIQRFEDLRKNSQEFGDLPE-VPEELINVDVR 119
>AY075425-1|AAL68241.1| 1234|Drosophila melanogaster LD46584p protein.
Length = 1234
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 44 LVELVPDPLLAQQIRDHVVAIEVT-VCHHEAKMNTIN 79
L+EL P P +AQQ+R + A EV V H+ + N
Sbjct: 1138 LLELAPRPDVAQQVRKILQACEVNPVDEHQLQYEEFN 1174
>AY051896-1|AAK93320.1| 1420|Drosophila melanogaster LD38533p protein.
Length = 1420
Score = 26.6 bits (56), Expect = 4.2
Identities = 10/35 (28%), Positives = 22/35 (62%), Gaps = 5/35 (14%)
Query: 17 CLNTSLSIRQEIQRFESVHPSIYALYDLVELVPDP 51
C+ T+ + ++I ++H +YD++E+VP+P
Sbjct: 1100 CIGTNFNYSEDITSRGNIH-----IYDIIEVVPEP 1129
>AJ011114-1|CAA09492.1| 1234|Drosophila melanogaster coatomer alpha
subunit protein.
Length = 1234
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 44 LVELVPDPLLAQQIRDHVVAIEVT-VCHHEAKMNTIN 79
L+EL P P +AQQ+R + A EV V H+ + N
Sbjct: 1138 LLELAPRPDVAQQVRKILQAYEVNPVDEHQLQYEEFN 1174
>AF241366-1|AAF98388.1| 813|Drosophila melanogaster cleavage and
polyadenylation specificityfactor protein.
Length = 813
Score = 26.6 bits (56), Expect = 4.2
Identities = 10/35 (28%), Positives = 22/35 (62%), Gaps = 5/35 (14%)
Query: 17 CLNTSLSIRQEIQRFESVHPSIYALYDLVELVPDP 51
C+ T+ + ++I ++H +YD++E+VP+P
Sbjct: 493 CIGTNFNYSEDITSRGNIH-----IYDIIEVVPEP 522
>AE014296-317|AAF47535.1| 1234|Drosophila melanogaster CG7961-PB,
isoform B protein.
Length = 1234
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 44 LVELVPDPLLAQQIRDHVVAIEVT-VCHHEAKMNTIN 79
L+EL P P +AQQ+R + A EV V H+ + N
Sbjct: 1138 LLELAPRPDVAQQVRKILQACEVNPVDEHQLQYEEFN 1174
>AE014296-316|AAF47534.1| 1234|Drosophila melanogaster CG7961-PA,
isoform A protein.
Length = 1234
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 44 LVELVPDPLLAQQIRDHVVAIEVT-VCHHEAKMNTIN 79
L+EL P P +AQQ+R + A EV V H+ + N
Sbjct: 1138 LLELAPRPDVAQQVRKILQACEVNPVDEHQLQYEEFN 1174
>AE013599-1901|AAF58240.1| 1455|Drosophila melanogaster CG10110-PA,
isoform A protein.
Length = 1455
Score = 26.6 bits (56), Expect = 4.2
Identities = 10/35 (28%), Positives = 22/35 (62%), Gaps = 5/35 (14%)
Query: 17 CLNTSLSIRQEIQRFESVHPSIYALYDLVELVPDP 51
C+ T+ + ++I ++H +YD++E+VP+P
Sbjct: 1135 CIGTNFNYSEDITSRGNIH-----IYDIIEVVPEP 1164
>AE013599-1900|AAM68553.1| 1420|Drosophila melanogaster CG10110-PB,
isoform B protein.
Length = 1420
Score = 26.6 bits (56), Expect = 4.2
Identities = 10/35 (28%), Positives = 22/35 (62%), Gaps = 5/35 (14%)
Query: 17 CLNTSLSIRQEIQRFESVHPSIYALYDLVELVPDP 51
C+ T+ + ++I ++H +YD++E+VP+P
Sbjct: 1100 CIGTNFNYSEDITSRGNIH-----IYDIIEVVPEP 1129
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.323 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,201,978
Number of Sequences: 52641
Number of extensions: 131653
Number of successful extensions: 347
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 339
Number of HSP's gapped (non-prelim): 21
length of query: 93
length of database: 24,830,863
effective HSP length: 72
effective length of query: 21
effective length of database: 21,040,711
effective search space: 441854931
effective search space used: 441854931
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 53 (25.4 bits)
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