Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002387-TA|BGIBMGA002387-PA|undefined
(93 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 57 2e-09
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 57 2e-09
AL031633-15|CAD92399.1| 139|Caenorhabditis elegans Hypothetical... 33 0.021
Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z67884-1|CAA91807.1| 347|Caenorhabditis elegans Hypothetical pr... 25 7.4
AL132951-6|CAC44308.2| 692|Caenorhabditis elegans Hypothetical ... 25 7.4
AL023853-1|CAA19558.1| 370|Caenorhabditis elegans Hypothetical ... 25 7.4
AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate carb... 25 7.4
Z92833-8|CAI70417.1| 719|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z80216-1|CAB02287.2| 338|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 25 9.8
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 25 9.8
AL023842-10|CAI70400.1| 719|Caenorhabditis elegans Hypothetical... 25 9.8
AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical ... 25 9.8
AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical ... 25 9.8
AL023842-1|CAD54167.1| 503|Caenorhabditis elegans Hypothetical ... 25 9.8
AF364604-1|AAK62778.1| 719|Caenorhabditis elegans hypoxia-induc... 25 9.8
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 56.8 bits (131), Expect = 2e-09
Identities = 26/47 (55%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 21 SLSIRQEIQRFESVHPSIYALYDLVELVPD--PLLAQQIRDHVVAIE 65
S IR EIQRFESVHP IY +YDL+ L+PD +++QIR+ +V++E
Sbjct: 15 SEQIRSEIQRFESVHPCIYQIYDLLNLLPDGCHAISEQIREQIVSVE 61
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin
gamma 1A protein.
Length = 952
Score = 56.8 bits (131), Expect = 2e-09
Identities = 26/47 (55%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 21 SLSIRQEIQRFESVHPSIYALYDLVELVPD--PLLAQQIRDHVVAIE 65
S IR EIQRFESVHP IY +YDL+ L+PD +++QIR+ +V++E
Sbjct: 15 SEQIRSEIQRFESVHPCIYQIYDLLNLLPDGCHAISEQIREQIVSVE 61
>AL031633-15|CAD92399.1| 139|Caenorhabditis elegans Hypothetical
protein Y39A1A.15d protein.
Length = 139
Score = 33.5 bits (73), Expect = 0.021
Identities = 15/19 (78%), Positives = 15/19 (78%)
Query: 21 SLSIRQEIQRFESVHPSIY 39
S IR EIQRFESVHP IY
Sbjct: 15 SEQIRSEIQRFESVHPCIY 33
>Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical
protein LLC1.3 protein.
Length = 495
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Query: 29 QRFESVHPSIYALYDLVELVPDPLLAQQIRDH-VVAIE 65
+RF++ PSI+A+ D++E P+LA + D ++ +E
Sbjct: 326 ERFQTKVPSIFAIGDVIE---GPMLAHKAEDEGILCVE 360
>Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical
protein D2023.2 protein.
Length = 1175
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 44 LVELVPDPLLAQQIRDHVVAIEVTVCHHEAKMNTINTRDYILKLKSD 90
+VE+ P P L + +R+ ++A + + H N T ++++ K +
Sbjct: 269 VVEIAPAPALPEGVREKILADALRLARHVGYQNA-GTVEFLVDQKGN 314
>Z67884-1|CAA91807.1| 347|Caenorhabditis elegans Hypothetical
protein T14G8.2 protein.
Length = 347
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 43 DLVELVPDPLLAQQIRDHVVAIEVTV 68
DL+++ +PLL IR+HV + TV
Sbjct: 26 DLLQISDNPLLYNSIREHVNTEKFTV 51
>AL132951-6|CAC44308.2| 692|Caenorhabditis elegans Hypothetical
protein Y67H2A.7 protein.
Length = 692
Score = 25.0 bits (52), Expect = 7.4
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 20 TSLSIRQEIQRFESVHPSIYALYDLVELVPDPLLAQQI 57
T L+ R E+V + Y LYDL V P+ A QI
Sbjct: 534 TLLASRHSFTAIETVQQAAYGLYDLE--VHGPIAAPQI 569
>AL023853-1|CAA19558.1| 370|Caenorhabditis elegans Hypothetical
protein Y71A12C.1 protein.
Length = 370
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/79 (17%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 SRQHSQACLNTSLSIRQEIQRFESVHPSIYALYDLV-ELVPDPLLAQQIRDHVVAIEVTV 68
+R A +++ Q ++ + ++ Y+L+ P + ++ ++
Sbjct: 81 NRAREMAANLNLVNLIQTLKDLDITRADKFSNYNLIGPTSPADAILIPVKYSAKKLQNPT 140
Query: 69 CHHEAKMNTINTRDYILKL 87
CHH + +N I T D++ K+
Sbjct: 141 CHHWSLLNQITTIDFLKKI 159
>AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate
carboxylase protein.
Length = 1175
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 44 LVELVPDPLLAQQIRDHVVAIEVTVCHHEAKMNTINTRDYILKLKSD 90
+VE+ P P L + +R+ ++A + + H N T ++++ K +
Sbjct: 269 VVEIAPAPALPEGVREKILADALRLARHVGYQNA-GTVEFLVDQKGN 314
>Z92833-8|CAI70417.1| 719|Caenorhabditis elegans Hypothetical
protein F38A6.3e protein.
Length = 719
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 16 ACLNTSLSIRQEIQRFESVHPSIYALYDLVELVP 49
+CL + +Q E + P + ALYDL + P
Sbjct: 617 SCLAPFVDTYDMMQMDEGLPPELQALYDLPDFTP 650
>Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 16 ACLNTSLSIRQEIQRFESVHPSIYALYDLVELVP 49
+CL + +Q E + P + ALYDL + P
Sbjct: 723 SCLAPFVDTYDMMQMDEGLPPELQALYDLPDFTP 756
>Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 16 ACLNTSLSIRQEIQRFESVHPSIYALYDLVELVP 49
+CL + +Q E + P + ALYDL + P
Sbjct: 721 SCLAPFVDTYDMMQMDEGLPPELQALYDLPDFTP 754
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 52 LLAQQIRDHVVAIEVTVCHHEAKMNTINTRDYILKLKSDTLT 93
L+A ++R + + +CH K + +D ++K ++TL+
Sbjct: 460 LIANKVRTFLPFQQEIMCHGPEKYAGVRLKDLMMKKANETLS 501
>Z80216-1|CAB02287.2| 338|Caenorhabditis elegans Hypothetical
protein F10G8.1 protein.
Length = 338
Score = 24.6 bits (51), Expect = 9.8
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 44 LVELVPDPLLAQQIRDHVVAIEVTVCHHEAKMNTINT 80
++E + D LLA QI D I V +C E + N+I T
Sbjct: 262 MLEYIMDQLLAGQIIDDGEKILVKIC--EQRNNSIQT 296
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 24.6 bits (51), Expect = 9.8
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 7 NMCSRQHSQACLNTSLSIRQEIQRFESVHPSIYALYDLVELVPDPLLAQQIRDHVVAIEV 66
N C R SQA LNT ++V+ S+ + L+ V L Q+ V+++ +
Sbjct: 214 NNCGRSFSQAPLNTYAQFINTRGCADAVYESVSSSLSLIVGVCVVLCIVQLLGIVLSMTL 273
Query: 67 TVCHHEAK 74
C +K
Sbjct: 274 CCCKGNSK 281
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
T05A12.4a protein.
Length = 1622
Score = 24.6 bits (51), Expect = 9.8
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 2 FGYRGNMCSR-QHSQACLNTSLSIRQEIQRFESVHPSIYALYDLVELVP 49
FG G CS + + A IR +++ H ALYD +L P
Sbjct: 1006 FGMMGIRCSAIRDTGALYENGKIIRDTVKKHHFPHLPFVALYDTNKLTP 1054
>AL023842-10|CAI70400.1| 719|Caenorhabditis elegans Hypothetical
protein F38A6.3e protein.
Length = 719
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 16 ACLNTSLSIRQEIQRFESVHPSIYALYDLVELVP 49
+CL + +Q E + P + ALYDL + P
Sbjct: 617 SCLAPFVDTYDMMQMDEGLPPELQALYDLPDFTP 650
>AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 16 ACLNTSLSIRQEIQRFESVHPSIYALYDLVELVP 49
+CL + +Q E + P + ALYDL + P
Sbjct: 723 SCLAPFVDTYDMMQMDEGLPPELQALYDLPDFTP 756
>AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 16 ACLNTSLSIRQEIQRFESVHPSIYALYDLVELVP 49
+CL + +Q E + P + ALYDL + P
Sbjct: 721 SCLAPFVDTYDMMQMDEGLPPELQALYDLPDFTP 754
>AL023842-1|CAD54167.1| 503|Caenorhabditis elegans Hypothetical
protein F38A6.3c protein.
Length = 503
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 16 ACLNTSLSIRQEIQRFESVHPSIYALYDLVELVP 49
+CL + +Q E + P + ALYDL + P
Sbjct: 401 SCLAPFVDTYDMMQMDEGLPPELQALYDLPDFTP 434
>AF364604-1|AAK62778.1| 719|Caenorhabditis elegans hypoxia-induced
factor 1 protein.
Length = 719
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 16 ACLNTSLSIRQEIQRFESVHPSIYALYDLVELVP 49
+CL + +Q E + P + ALYDL + P
Sbjct: 617 SCLAPFVDTYDMMQMDEGLPPELQALYDLPDFTP 650
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,106,243
Number of Sequences: 27539
Number of extensions: 65497
Number of successful extensions: 220
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 207
Number of HSP's gapped (non-prelim): 21
length of query: 93
length of database: 12,573,161
effective HSP length: 69
effective length of query: 24
effective length of database: 10,672,970
effective search space: 256151280
effective search space used: 256151280
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 51 (24.6 bits)
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