GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002386-TA|BGIBMGA002386-PA|undefined
         (333 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    31   0.060
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   1.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   3.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   3.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.1  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 30.7 bits (66), Expect = 0.060
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 192 IIHYPVKVPVDNPIPVHVDKPVPVHI 217
           +I  PV   V+ P P+ V+KP PV +
Sbjct: 219 VIEKPVPYTVEKPYPIEVEKPFPVEV 244



 Score = 27.9 bits (59), Expect = 0.42
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 193 IHYPVKVPVDNPIPVHVDKPVP 214
           +  P+K+P+   IP  ++KPVP
Sbjct: 204 VEQPIKIPIYKVIPKVIEKPVP 225



 Score = 23.4 bits (48), Expect = 9.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 195 YPVKVPVDNPIPVHVDKPVP 214
           YP++V V+ PI + + K +P
Sbjct: 198 YPLQVNVEQPIKIPIYKVIP 217


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 290 HEEEHQHIGSHDDHHGFKQHN 310
           H + H H   H  HH  +QH+
Sbjct: 180 HSQHHHHHHHHHPHHSQQQHS 200


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 8/19 (42%), Positives = 9/19 (47%)

Query: 286 PVFHHEEEHQHIGSHDDHH 304
           P  HH+  H H   H  HH
Sbjct: 91  PPHHHQHPHHHQLPHHPHH 109


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 8/19 (42%), Positives = 9/19 (47%)

Query: 286 PVFHHEEEHQHIGSHDDHH 304
           P  HH+  H H   H  HH
Sbjct: 91  PPHHHQHPHHHQLPHHPHH 109


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 9/22 (40%), Positives = 11/22 (50%), Gaps = 1/22 (4%)

Query: 290 HEEEHQHIGSHD-DHHGFKQHN 310
           H + HQH G H   HH    H+
Sbjct: 649 HHQAHQHQGQHHAQHHSNGTHH 670


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.141    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,948
Number of Sequences: 2123
Number of extensions: 3481
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 11
length of query: 333
length of database: 516,269
effective HSP length: 64
effective length of query: 269
effective length of database: 380,397
effective search space: 102326793
effective search space used: 102326793
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)